| Contig-U11179-1 |
| Contig ID |
Contig-U11179-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
2748 |
| Chromosome number (1..6, M) |
1 |
| Chromosome length |
4919822 |
| Start point |
2822691 |
| End point |
2825439 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
7 |
| Number of EST |
8 |
| Link to clone list |
U11179 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.23 |
| Homology vs DNA |
Query= Contig-U11179-1 (Contig-U11179-1Q) /CSM_Contig/Contig-U11179-1Q.Seq.d
(2758 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ348450) Dictyostelium discoideum cDNA clone:dda33c12, 3' ... 1457 0.0 2
(BJ338061) Dictyostelium discoideum cDNA clone:dda59n22, 5' ... 1207 0.0 1
(BJ337342) Dictyostelium discoideum cDNA clone:dda57h06, 5' ... 1181 0.0 1
(BJ395620) Dictyostelium discoideum cDNA clone:dds39f15, 5' ... 1170 0.0 1
(BJ418164) Dictyostelium discoideum cDNA clone:ddv31i23, 5' ... 1068 0.0 1
(BJ333057) Dictyostelium discoideum cDNA clone:dda41g09, 5' ... 900 0.0 2
(BJ330930) Dictyostelium discoideum cDNA clone:dda33c12, 5' ... 821 0.0 2
(BJ419663) Dictyostelium discoideum cDNA clone:ddv36f19, 5' ... 458 0.0 3
(AU074397) Dictyostelium discoideum slug cDNA, clone SSK579. 188 8e-43 1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 36 5e-05 23
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 34 8e-05 12
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 38 2e-04 20
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 36 6e-04 19
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 38 8e-04 24
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 38 0.003 22
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 34 0.008 22
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 32 0.009 15
(AC176416) Strongylocentrotus purpuratus clone R3-12I3, WORK... 38 0.018 11
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 40 0.018 18
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 36 0.049 18
(AL671117) Mouse DNA sequence from clone RP23-278L4 on chrom... 38 0.060 12
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 34 0.083 15
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 36 0.100 19
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 34 0.10 19
(AC115680) Dictyostelium discoideum chromosome 2 map 4915084... 40 0.11 10
(AE017308) Mycoplasma mobile 163K complete genome. 32 0.11 23
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 36 0.12 17
(AF198036) Mycoplasma pulmonis hypothetical membrane protein... 32 0.17 6
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 34 0.31 19
(FH599786) CHO_OF4920xd02r1.ab1 CHO_OF4 Nicotiana tabacum ge... 36 0.33 2
(FH599736) CHO_OF4920xd02f1.ab1 CHO_OF4 Nicotiana tabacum ge... 36 0.33 2
(FH195207) CHO_OF3051xn13f1.ab1 CHO_OF3 Nicotiana tabacum ge... 36 0.34 2
(AL808118) Mouse DNA sequence from clone RP23-287O8 on chrom... 50 0.46 1
(AC096589) Homo sapiens BAC clone RP11-744G10 from 2, comple... 50 0.46 1
(AC064845) Homo sapiens chromosome 2 clone RP11-55E16, WORKI... 50 0.46 1
(FH692471) CHO_OF5115xp07f1.ab1 CHO_OF5 Nicotiana tabacum ge... 50 0.46 1
(AQ043378) CIT-HSP-2327N12.TR CIT-HSP Homo sapiens genomic c... 50 0.46 1
(BZ019696) oeg76h09.b1 B.oleracea002 Brassica oleracea genom... 50 0.46 1
(CP000825) Prochlorococcus marinus str. MIT 9215, complete g... 36 0.48 23
(BD452968) Diagnosis of Diseases Associated with tumor suppr... 34 0.58 6
(AX251447) Sequence 415 from Patent WO0168912. 34 0.58 6
(AC117267) Dictyostelium discoideum chromosome 2 map 5836255... 30 0.71 9
(AC116920) Dictyostelium discoideum chromosome 2 map 4415041... 34 0.74 13
(EJ324680) 1095403683766 Global-Ocean-Sampling_GS-27-01-01-1... 32 0.77 4
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 30 0.88 14
(CS468864) Sequence 55 from Patent EP1748080. 36 0.90 15
(CS419341) Sequence 55 from Patent WO2006094836. 36 0.90 15
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 34 0.91 14
(CR940348) Theileria annulata genomic DNA chromosome 2. 38 0.93 20
(EJ113927) 1092343253776 Global-Ocean-Sampling_GS-27-01-01-1... 34 0.94 4
(FF555387) MOPE505TF MOP Vigna unguiculata cDNA 5', mRNA seq... 42 0.94 2
(FF548359) MOPE505TR MOP Vigna unguiculata cDNA 3', mRNA seq... 42 0.95 2
(AC181600) Strongylocentrotus purpuratus clone R3-1109A21, W... 38 1.1 11
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117... 30 1.3 15
(CR847854) Zebrafish DNA sequence from clone DKEY-229J6 in l... 40 1.3 10
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 32 1.5 15
(BD452555) Diagnosis of Diseases Associated with tumor suppr... 46 1.5 4
(AX348544) Sequence 2 from Patent WO0202807. 46 1.5 4
(AX344155) Sequence 2 from Patent WO0200926. 46 1.5 4
(AX251034) Sequence 2 from Patent WO0168912. 46 1.5 4
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 36 1.5 14
(AC150718) Callithrix jacchus clone CH259-184O16, WORKING DR... 48 1.8 1
(AC150613) Callithrix jacchus clone CH259-397F10, WORKING DR... 48 1.8 1
(AC230771) Bos taurus clone CH240-499N17, WORKING DRAFT SEQU... 48 1.8 1
(AC211119) Chlorocebus aethiops clone CH252-503G9, WORKING D... 48 1.8 1
(AC193292) Colobus guereza clone CH272-65A19, WORKING DRAFT ... 48 1.8 1
(AC179730) Strongylocentrotus purpuratus clone R3-1018M21, W... 48 1.8 1
(CZ290584) cp70g10.r Candida parapsilosis Random Genomic Lib... 48 1.8 1
(AM568081) Paracentrotus lividus EST, clone MPMGp1173O03111Q... 48 1.8 1
(AC175984) Strongylocentrotus purpuratus clone R3-17H6, WORK... 38 1.9 10
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 36 2.3 17
(CB403210) OSTR003F2_1 AD-wrmcDNA Caenorhabditis elegans cDN... 34 2.3 3
(CU179680) Mycoplasma agalactiae PG2 chromosome, complete se... 36 2.4 20
(AC179794) Strongylocentrotus purpuratus clone R3-1014K3, WO... 40 2.8 12
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595... 30 3.5 16
(EK251633) 1095460282500 Global-Ocean-Sampling_GS-31-01-01-1... 36 3.7 3
(AM470988) Vitis vinifera, whole genome shotgun sequence, co... 36 3.7 2
(EJ536174) 1092955260676 Global-Ocean-Sampling_GS-29-01-01-1... 40 3.8 2
(AC180224) Strongylocentrotus purpuratus clone R3-36O10, WOR... 40 4.2 6
(FH088830) CHO_OF3034xg09r1.ab1 CHO_OF3 Nicotiana tabacum ge... 46 4.2 2
(AM449844) Vitis vinifera contig VV78X264538.5, whole genome... 38 4.2 4
(FC810792) Sr_pASP6_05i15_SP6 S. ratti mixed stage pAMP Stro... 36 4.3 3
(AC181938) Strongylocentrotus purpuratus clone R3-1009E08, W... 40 4.3 9
(ER324865) 1092344202014 Global-Ocean-Sampling_GS-34-01-01-1... 34 4.4 3
(AE014833) Plasmodium falciparum 3D7 chromosome 10 section 5... 34 4.6 15
(EJ211455) 1092347005716 Global-Ocean-Sampling_GS-27-01-01-1... 36 4.6 2
(EJ507751) 1095407013042 Global-Ocean-Sampling_GS-28-01-01-1... 36 4.7 2
(EC615612) SAAH-aaa67b12.g1 Agen 0058 Schmidtea mediterranea... 36 4.7 2
(AM468797) Vitis vinifera contig VV78X247998.5, whole genome... 40 4.9 2
(AM431391) Vitis vinifera contig VV78X104556.11, whole genom... 36 4.9 4
(EC273072) TT1C249TH Tetrahymena thermophila SB210 cDNA libr... 38 5.2 3
(AC164345) Bos taurus clone CH240-148F4, *** SEQUENCING IN P... 44 5.3 9
(EK568060) 1095521054760 Global-Ocean-Sampling_GS-32-01-01-1... 32 5.6 3
(AG278800) Mus musculus molossinus DNA, clone:MSMg01-049E16.... 42 6.2 2
(AX345938) Sequence 1009 from Patent WO0200928. 34 6.2 5
(ER291450) 1092343606309 Global-Ocean-Sampling_GS-34-01-01-1... 34 6.3 3
(EU168190) Heterosigma akashiwo strain NIES 293 chloroplast,... 36 7.0 9
(CR925739) Zebrafish DNA sequence from clone DKEY-87G10 in l... 46 7.1 1
(BX640462) Zebrafish DNA sequence from clone CH211-153D8 in ... 46 7.1 1
(BX469912) Zebrafish DNA sequence from clone CH211-156L18 in... 46 7.1 1
>(BJ348450) Dictyostelium discoideum cDNA clone:dda33c12, 3' end,
single read.
Length = 783
Score = 1457 bits (735), Expect(2) = 0.0
Identities = 735/735 (100%)
Strand = Plus / Minus
Query: 1099 attaatgtcggtcaagatttcccatgttgatatgtcattgcgttactttgacaatcaaca 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 attaatgtcggtcaagatttcccatgttgatatgtcattgcgttactttgacaatcaaca 724
Query: 1159 atcatttgatggtaaaatcgatgcagaaattcaaaagattccatatgaagaagatttatt 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 atcatttgatggtaaaatcgatgcagaaattcaaaagattccatatgaagaagatttatt 664
Query: 1219 accagagaatgttcataagagtacaatcataccacatactgatactcctttaagattctc 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 accagagaatgttcataagagtacaatcataccacatactgatactcctttaagattctc 604
Query: 1279 ttatcaattcaatgaaactggttattataaaataaaattaaactatagtaatggtggtga 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ttatcaattcaatgaaactggttattataaaataaaattaaactatagtaatggtggtga 544
Query: 1339 acaattatctcaatatcataccatttcattgtttgtatttggtaaacaatctcaagcaga 1398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 acaattatctcaatatcataccatttcattgtttgtatttggtaaacaatctcaagcaga 484
Query: 1399 attagaatataaagaatgtactgcacctgttaaacaaacaactacaaacaacacctcatt 1458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 attagaatataaagaatgtactgcacctgttaaacaaacaactacaaacaacacctcatt 424
Query: 1459 actctatggaaaggaaacatttaaagctaaaccaaaacttgatatcaattgttcattaga 1518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 actctatggaaaggaaacatttaaagctaaaccaaaacttgatatcaattgttcattaga 364
Query: 1519 taaagagacttatcaattgggtgatacaattaaaatgtgtatctcttcaaaatcattgaa 1578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 taaagagacttatcaattgggtgatacaattaaaatgtgtatctcttcaaaatcattgaa 304
Query: 1579 tgccaagggttacatttgttgctccaaagagaatacaatcattaatgtcataccaattca 1638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tgccaagggttacatttgttgctccaaagagaatacaatcattaatgtcataccaattca 244
Query: 1639 attgattgatggtcaacatgattgtaaatttgaaatcaatgaaaaagtttattatcaacc 1698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 attgattgatggtcaacatgattgtaaatttgaaatcaatgaaaaagtttattatcaacc 184
Query: 1699 attattctatgtttatttagaaggtagtttgttggtggaaataaatggtggccaaaaggt 1758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 attattctatgtttatttagaaggtagtttgttggtggaaataaatggtggccaaaaggt 124
Query: 1759 taatcgtttaacaagttcattcgtaaaggtaccagtaaagattgattacactgacaagct 1818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 taatcgtttaacaagttcattcgtaaaggtaccagtaaagattgattacactgacaagct 64
Query: 1819 attgaatgttcaagt 1833
|||||||||||||||
Sbjct: 63 attgaatgttcaagt 49
Score = 93.7 bits (47), Expect(2) = 0.0
Identities = 47/47 (100%)
Strand = Plus / Minus
Query: 1836 aaaaatgtaataaattccaatctccatcagaagaatcaaatattact 1882
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 aaaaatgtaataaattccaatctccatcagaagaatcaaatattact 1
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 3,348,415,248
Number of extensions: 211145731
Number of successful extensions: 18042426
Number of sequences better than 10.0: 200
Length of query: 2758
Length of database: 95,242,211,685
Length adjustment: 25
Effective length of query: 2733
Effective length of database: 97,216,030,006
Effective search space: 265691410006398
Effective search space used: 265691410006398
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)
|
| protein update |
2009. 6.29 |
| Homology vs Protein |
Query= Contig-U11179-1 (Contig-U11179-1Q) /CSM_Contig/Contig-U11179-1Q.Seq.d
(2758 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE016820_243(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 72 8e-11
CP000117_2349(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 69 7e-10
AF250284_180(AF250284|pid:none) Amsacta moorei entomopoxvirus, c... 69 9e-10
AE014134_1952(AE014134|pid:none) Drosophila melanogaster chromos... 69 1e-09
AY251806_1(AY251806|pid:none) Bigelowiella natans ubiquitin/ribo... 67 3e-09
EU284858_1(EU284858|pid:none) TSA: Elaeis guineensis EgEfMPOB000... 67 3e-09
EU558350_1(EU558350|pid:none) Phoronis muelleri putative ubiquit... 67 3e-09
EU247124_1(EU247124|pid:none) Lycosa singoriensis 60S ribosomal ... 67 3e-09
CQ918486_1(CQ918486|pid:none) Sequence 6 from Patent WO2004097011. 67 5e-09
CQ918481_1(CQ918481|pid:none) Sequence 1 from Patent WO2004097011. 67 5e-09
AJ243802_2(AJ243802|pid:none) Kluyveromyces lactis ORF YDR183W (... 66 6e-09
EF633956_1(EF633956|pid:none) Ornithodoros parkeri clone OP-73 u... 66 6e-09
X92422_1(X92422|pid:none) Z.mays mRNA for ubiquitin/ribosomal pr... 66 8e-09
DQ445503_1(DQ445503|pid:none) Graphocephala atropunctata isolate... 66 8e-09
AY752793_1(AY752793|pid:none) Culicoides sonorensis clone CsARU ... 66 8e-09
EU558303_1(EU558303|pid:none) Novocrania anomala putative ubiqui... 65 1e-08
(Q8YM40) RecName: Full=UPF0192 protein all5100; Flags: Precursor... 65 1e-08
AM040014_1(AM040014|pid:none) Eucinetus sp. APV-2005 mRNA for ub... 65 1e-08
EU574818_1(EU574818|pid:none) Ornithodoros coriaceus clone OC-23... 65 1e-08
CP001055_625(CP001055|pid:none) Elusimicrobium minutum Pei191, c... 65 1e-08
M24507_1(M24507|pid:none) Synthetic human ubiquitin (UBCEP80) ge... 65 1e-08
AY831445_1(AY831445|pid:none) Monocercomonoides sp. PA203 polyub... 65 2e-08
AF539999_151(AF539999|pid:none) Mamestra configurata nucleopolyh... 65 2e-08
FJ227128_48(FJ227128|pid:none) Euproctis pseudoconspersa nucleop... 65 2e-08
AY251805_1(AY251805|pid:none) Bigelowiella natans ubiquitin/ribo... 65 2e-08
M10939_1(M10939|pid:none) Human ubiquitin mRNA, 3' end. 65 2e-08
EU780426_128(EU780426|pid:none) Spodoptera litura nucleopolyhedr... 65 2e-08
S40239(S40239) ubiquitin/ribosomal protein S27a fusion protein -... 65 2e-08
U17246_2(U17246|pid:none) Saccharomyces cerevisiae chromosome XI... 65 2e-08
CP001325_12(CP001325|pid:none) Micromonas sp. RCC299 chromosome ... 65 2e-08
BC053371_1(BC053371|pid:none) Homo sapiens ribosomal protein S27... 65 2e-08
DQ839403_1(DQ839403|pid:none) Morus bombycis ubiquitin extension... 65 2e-08
U67931_1(U67931|pid:none) Gallus gallus ubiquitin/ribosomal prot... 65 2e-08
AY251809_1(AY251809|pid:none) Lotharella globosa ubiquitin/ribos... 64 2e-08
AF063866_144(AF063866|pid:none) Melanoplus sanguinipes entomopox... 64 2e-08
UQNCR(PQ0201;S05977) ubiquitin / ribosomal protein S27a - Neuros... 64 2e-08
AY251808_1(AY251808|pid:none) Lotharella globosa ubiquitin/ribos... 64 2e-08
AM040011_1(AM040011|pid:none) Agriotes lineatus mRNA for ubiquit... 64 2e-08
AY251793_1(AY251793|pid:none) Bigelowiella natans ubiquitin/acti... 64 2e-08
EU139195_1(EU139195|pid:none) Flustra foliacea ubiquinated putat... 64 2e-08
L19056_1(L19056|pid:none) Artemia franciscana ubiquitin mRNA, pa... 64 2e-08
CR382139_690(CR382139|pid:none) Debaryomyces hansenii strain CBS... 64 3e-08
AK018706_1(AK018706|pid:none) Mus musculus adult male kidney cDN... 64 3e-08
AM746676_4416(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 64 3e-08
A63899_1(A63899|pid:none) Sequence 24 from Patent WO9723633. &C... 64 3e-08
EF120638_1(EF120638|pid:none) Hevea brasiliensis ubiquitin exten... 64 4e-08
CR382132_415(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 64 4e-08
DQ363465_1(DQ363465|pid:none) Ictalurus punctatus clone C153BB02... 64 4e-08
CP000393_252(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 64 4e-08
BT046483_1(BT046483|pid:none) Salmo salar clone ssal-evd-569-157... 64 4e-08
EF146180_1(EF146180|pid:none) Populus trichocarpa clone WS0116_A... 64 4e-08
AM040015_1(AM040015|pid:none) Micromalthus debilis mRNA for ubiq... 64 4e-08
AM426496_4(AM426496|pid:none) Vitis vinifera contig VV78X245184.... 64 4e-08
AY099133_1(AY099133|pid:none) Cercomonas edax isolate pub5 polyu... 64 4e-08
BC049478_1(BC049478|pid:none) Danio rerio zgc:66168, mRNA (cDNA ... 64 4e-08
AB291582_1(AB291582|pid:none) Solea senegalensis rpS27a mRNA for... 64 4e-08
(P13117) RecName: Full=Ubiquitin; 64 4e-08
DQ200392_1(DQ200392|pid:none) Solanum tuberosum clone 068E12 ubi... 64 4e-08
AY251803_1(AY251803|pid:none) Bigelowiella natans ubiquitin/ribo... 64 4e-08
EF070591_1(EF070591|pid:none) Maconellicoccus hirsutus clone WHM... 64 4e-08
AM040016_1(AM040016|pid:none) Timarcha balearica mRNA for ubiqui... 64 4e-08
CU928175_164(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 64 4e-08
EF144484_1(EF144484|pid:none) Populus trichocarpa clone PX0019_L... 64 4e-08
AJ297726_1(AJ297726|pid:none) Ciona intestinalis mRNA for putati... 64 4e-08
UQNC(S05323) polyubiquitin 4 - Neurospora crassa &X13140_1(X131... 64 4e-08
AJ575140_1(AJ575140|pid:none) Sordaria macrospora partial smu599... 64 4e-08
AY101385_1(AY101385|pid:none) Cercomonas ATCC50316 polyubiquitin... 64 4e-08
AC004411_6(AC004411|pid:none) Arabidopsis thaliana chromosome 2 ... 64 4e-08
AF502248_1(AF502248|pid:none) Epinephelus coioides 40s ribosomal... 64 4e-08
AY099140_1(AY099140|pid:none) Cercomonas ATCC50316 isolate pub2 ... 63 5e-08
L22576_1(L22576|pid:none) Solanum tuberosum ubiquitin/ribosomal ... 63 5e-08
AY372537_1(AY372537|pid:none) Cucumis sativus ubiquitin extensio... 63 5e-08
BT043890_1(BT043890|pid:none) Salmo salar clone HM4_3735 ribosom... 63 5e-08
EF676259_1(EF676259|pid:none) Picea sitchensis clone WS02724_L09... 63 5e-08
AP008211_348(AP008211|pid:none) Oryza sativa (japonica cultivar-... 63 5e-08
AF348700_1(AF348700|pid:none) Homo sapiens ubiquitin A-52 residu... 63 5e-08
AC141106_28(AC141106|pid:none) Medicago truncatula clone mth2-33... 63 5e-08
AL953908_5(AL953908|pid:none) Zebrafish DNA sequence from clone ... 63 5e-08
EF035042_123(EF035042|pid:none) Spodoptera frugiperda MNPV isola... 63 5e-08
BT049653_1(BT049653|pid:none) Salmo salar clone ssal-evd-544-065... 63 5e-08
DQ975458_1(DQ975458|pid:none) Capsicum annuum ubiquitin extensio... 63 5e-08
BT051253_1(BT051253|pid:none) Medicago truncatula clone MTYF1_F2... 63 5e-08
EF144403_1(EF144403|pid:none) Populus trichocarpa clone PX0019_E... 63 5e-08
AB021972_1(AB021972|pid:none) Bombyx mori UBI1 mRNA for ubiquiti... 63 5e-08
AC005292_28(AC005292|pid:none) Genomic sequence for Arabidopsis ... 63 5e-08
AY099142_1(AY099142|pid:none) Cercomonas ATCC50316 isolate pub4 ... 63 5e-08
AF400203_1(AF400203|pid:none) Spodoptera frugiperda ribosomal pr... 63 5e-08
AY099144_1(AY099144|pid:none) Cercomonas ATCC50316 isolate pub6 ... 63 5e-08
AY099143_1(AY099143|pid:none) Cercomonas ATCC50316 isolate pub5 ... 63 5e-08
EF146368_1(EF146368|pid:none) Populus trichocarpa clone WS0117_J... 63 7e-08
AJ965275_1(AJ965275|pid:none) Polyplastron multivesiculatum part... 63 7e-08
AY099118_1(AY099118|pid:none) Chlorarachnion CCMP621 isolate pub... 63 7e-08
EU153190_1(EU153190|pid:none) Heterocapsa triquetra clone Htr-cD... 63 7e-08
AY099119_1(AY099119|pid:none) Chlorarachnion CCMP621 isolate pub... 63 7e-08
AF298826_1(AF298826|pid:none) Prunus avium ubiquitin/ribosomal p... 63 7e-08
AP008215_962(AP008215|pid:none) Oryza sativa (japonica cultivar-... 63 7e-08
AJ965273_1(AJ965273|pid:none) Polyplastron multivesiculatum part... 63 7e-08
AF056623_1(AF056623|pid:none) Magnaporthe grisea strain Guy-11 u... 63 7e-08
BT035083_1(BT035083|pid:none) Zea mays full-length cDNA clone ZM... 63 7e-08
AJ965270_1(AJ965270|pid:none) Polyplastron multivesiculatum part... 63 7e-08
EU952584_1(EU952584|pid:none) Zea mays clone 1283821 40S ribosom... 63 7e-08
AJ965272_1(AJ965272|pid:none) Polyplastron multivesiculatum part... 63 7e-08
I45964(I45964) polyubiquitin - bovine (fragment) &M62428_1(M624... 63 7e-08
(P49634) RecName: Full=Ubiquitin; 63 7e-08
D83208_1(D83208|pid:none) Cavia cobaya mRNA for ubiquitin, compl... 63 7e-08
AJ965274_1(AJ965274|pid:none) Polyplastron multivesiculatum part... 63 7e-08
AY251802_1(AY251802|pid:none) Gymnochlora stellata ubiquitin/act... 63 7e-08
X87156_1(X87156|pid:none) Acanthamoeba sp. 4b3 polyubiquitin gene. 63 7e-08
AM442845_1(AM442845|pid:none) Vitis vinifera contig VV78X064871.... 63 7e-08
AJ965271_1(AJ965271|pid:none) Polyplastron multivesiculatum part... 63 7e-08
AM502227_95(AM502227|pid:none) Leishmania infantum chromosome 9. 62 9e-08
AF064593_1(AF064593|pid:none) Schistosoma japonicum ubiquitin/ri... 62 9e-08
Y17004_1(Y17004|pid:none) Suberites domuncula mRNA for monoubiqu... 62 9e-08
A29456(A29456;B29456;S48386;S38172) ubiquitin / ribosomal protei... 62 9e-08
EF070483_1(EF070483|pid:none) Maconellicoccus hirsutus clone WHM... 62 9e-08
FN315483_1(FN315483|pid:none) Schistosoma japonicum isolate Anhu... 62 9e-08
AF502575_1(AF502575|pid:none) Musa acuminata ubiquitin (UBQ1) ge... 62 9e-08
DQ011576_1(DQ011576|pid:none) Euphorbia characias polyubiquitin ... 62 9e-08
BT074005_1(BT074005|pid:none) Oncorhynchus mykiss clone omyk-evo... 62 9e-08
AF116772_1(AF116772|pid:none) Lilium longiflorum polyubiquitin m... 62 9e-08
CU928179_267(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 62 9e-08
AF104021_1(AF104021|pid:none) Bovine viral diarrhea virus-2 subg... 62 9e-08
S55244(S55244;S61069)polyubiquitin 4 - Arabidopsis thaliana 62 9e-08
AY748811_1(AY748811|pid:none) Thaumatomonas sp. DDM-2005 polyubi... 62 9e-08
AY961507_1(AY961507|pid:none) Lysiphlebus testaceipes ribosomal ... 62 9e-08
AE017341_332(AE017341|pid:none) Cryptococcus neoformans var. neo... 62 9e-08
DQ673413_1(DQ673413|pid:none) Diaphorina citri putative ubiquiti... 62 9e-08
U45317_1(U45317|pid:none) Litomosoides sigmodontis ubiquitin c-t... 62 9e-08
S11248(S11248)ubiquitin / ribosomal protein CEP52 - mouse (fragm... 62 1e-07
BC049473_1(BC049473|pid:none) Danio rerio zgc:172187, mRNA (cDNA... 62 1e-07
BC127395_1(BC127395|pid:none) Danio rerio zgc:153686, mRNA (cDNA... 62 1e-07
CU928169_242(CU928169|pid:none) Kluyveromyces thermotolerans str... 62 1e-07
AB036060_1(AB036060|pid:none) Oncorhynchus mykiss mRNA for ubiqu... 62 1e-07
AP003725_1(AP003725|pid:none) Oryza sativa Japonica Group genomi... 62 1e-07
EU959003_1(EU959003|pid:none) Zea mays clone 208868 40S ribosoma... 62 1e-07
AB032025_1(AB032025|pid:none) Canis lupus familiaris mRNA for ub... 62 1e-07
D63791_1(D63791|pid:none) Homo sapiens UbC gene for polyubiquiti... 62 1e-07
S25154(S25154)ubiquitin / ribosomal protein CEP52 - Leishmania m... 62 1e-07
BT079002_1(BT079002|pid:none) Esox lucius clone eluc-evq-516-246... 62 1e-07
AY072292_1(AY072292|pid:none) Spodoptera frugiperda ribosomal pr... 62 1e-07
DQ286557_1(DQ286557|pid:none) Helicoverpa assulta ubiquitin-53aa... 62 1e-07
BC167447_1(BC167447|pid:none) Danio rerio zgc:172187, mRNA (cDNA... 62 1e-07
X07451_1(X07451|pid:none) Trypanosoma cruzi ubiquitin gene. &X0... 62 1e-07
BT073985_1(BT073985|pid:none) Oncorhynchus mykiss clone omyk-evo... 62 1e-07
AB018107_9(AB018107|pid:none) Arabidopsis thaliana genomic DNA, ... 62 1e-07
DQ413222_1(DQ413222|pid:none) Acyrthosiphon pisum isolate WHAP02... 62 1e-07
AJ388512_1(AJ388512|pid:none) Canis familiaris mRNA for ubiquiti... 62 1e-07
AE016819_518(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 62 1e-07
BT073019_1(BT073019|pid:none) Oncorhynchus mykiss clone omyk-evn... 62 1e-07
BT043771_1(BT043771|pid:none) Salmo salar clone HM6_1209 ubiquit... 62 1e-07
AY961529_1(AY961529|pid:none) Lysiphlebus testaceipes ribosomal ... 62 1e-07
AY857455_1(AY857455|pid:none) Suberites domuncula L40-ubiquitin ... 62 1e-07
AY318871_96(AY318871|pid:none) Canarypox virus strain ATCC VR-11... 62 1e-07
UQWO7A(S13136) ubiquitin / ribosomal protein S27a - tobacco horn... 62 1e-07
AC149642_19(AC149642|pid:none) Medicago truncatula chromosome 2 ... 62 1e-07
AK228265_1(AK228265|pid:none) Arabidopsis thaliana mRNA for poly... 62 1e-07
CR380953_349(CR380953|pid:none) Candida glabrata strain CBS138 c... 62 1e-07
AM259605_1(AM259605|pid:none) Salmo salar partial mRNA for ubiqu... 62 1e-07
S55245(S55245)polyubiquitin 5 - Arabidopsis thaliana 62 1e-07
AJ965259_1(AJ965259|pid:none) Dasytricha ruminantium partial mRN... 62 1e-07
BT073122_1(BT073122|pid:none) Oncorhynchus mykiss clone omyk-evn... 62 1e-07
CP000139_1874(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 62 1e-07
AJ007936_1(AJ007936|pid:none) Gibberella pulicaris ubi1 gene. &... 62 1e-07
AM494963_268(AM494963|pid:none) Leishmania braziliensis chromoso... 62 1e-07
AE016816_144(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 62 1e-07
L31492_1(L31492|pid:none) Caenorhabditis elegans ubiquitin/ribos... 62 1e-07
AF395864_1(AF395864|pid:none) Branchiostoma belcheri ubiquitin m... 62 1e-07
AF056624_1(AF056624|pid:none) Magnaporthe grisea strain Guy-11 u... 62 1e-07
EF145452_1(EF145452|pid:none) Populus trichocarpa clone WS01124_... 62 1e-07
BT078470_1(BT078470|pid:none) Lepeophtheirus salmonis clone lsal... 62 1e-07
AJ698912_1(AJ698912|pid:none) Fusarium fujikuroi partial mRNA fo... 62 1e-07
CR380950_216(CR380950|pid:none) Candida glabrata strain CBS138 c... 62 1e-07
CS362623_1(CS362623|pid:none) Sequence 3 from Patent WO2006073320. 62 1e-07
X01474_1(X01474|pid:none) Yeast gene fragment for polyubiquitin ... 62 1e-07
EU677732_1(EU677732|pid:none) Caenorhabditis brenneri clone 13D4... 62 1e-07
AJ965268_1(AJ965268|pid:none) Eudiplodinium maggii partial mRNA ... 62 1e-07
AY286305_1(AY286305|pid:none) Heterodera schachtii ubiquitin ext... 62 1e-07
FN392322_794(FN392322|pid:none) Pichia pastoris GS115 chromosome... 62 1e-07
AK291539_1(AK291539|pid:none) Homo sapiens cDNA FLJ75516 complet... 62 1e-07
FJ527489_1(FJ527489|pid:none) Plutella xylostella isolate Ub1 ub... 62 1e-07
AF056625_1(AF056625|pid:none) Magnaporthe grisea strain Guy-11 p... 62 1e-07
CU928179_320(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 62 1e-07
DQ914562_1(DQ914562|pid:none) Porphyra yezoensis polyubiquitin (... 62 1e-07
AJ965276_1(AJ965276|pid:none) Epidinium ecaudatum partial mRNA f... 62 1e-07
AJ965269_1(AJ965269|pid:none) Metadinium medium partial mRNA for... 62 1e-07
BT061197_1(BT061197|pid:none) Zea mays full-length cDNA clone ZM... 62 1e-07
AP007155_1027(AP007155|pid:none) Aspergillus oryzae RIB40 genomi... 62 1e-07
AY303168_2(AY303168|pid:none) Degron tagging vector pSMUG2+ beta... 62 1e-07
Y17558_1(Y17558|pid:none) Candida albicans UB14 gene. 62 1e-07
CP001327_692(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 62 1e-07
AF060232_1(AF060232|pid:none) Botryotinia fuckeliana monoubiquit... 62 1e-07
AJ243800_3(AJ243800|pid:none) Kluyveromyces lactis rim101 (parti... 62 1e-07
AJ937550_1(AJ937550|pid:none) Bathysiphon sp. 3980 partial pub g... 62 1e-07
AF285161_1(AF285161|pid:none) Mus musculus cell-line C3H/He poly... 62 1e-07
CS362629_1(CS362629|pid:none) Sequence 9 from Patent WO2006073320. 62 1e-07
BT083357_1(BT083357|pid:none) Anoplopoma fimbria clone afim-evh-... 62 1e-07
AJ965257_1(AJ965257|pid:none) Dasytricha ruminantium partial mRN... 62 1e-07
DQ837165_21(DQ837165|pid:none) Ecotropis obliqua NPV strain A1, ... 62 1e-07
AF175521_1(AF175521|pid:none) Emericella nidulans UBI1 (ubi1) mR... 62 1e-07
AB047855_1(AB047855|pid:none) Oryza sativa Ub-CEP52-1 gene for u... 62 1e-07
U32627_1(U32627|pid:none) Candida albicans ubiquitin precursor (... 62 1e-07
BT051346_1(BT051346|pid:none) Medicago truncatula clone MTYF1_F2... 62 1e-07
DQ104334_1(DQ104334|pid:none) Morus mongolica ubiquitin monomer ... 62 1e-07
UQBY(D29456;S64790;B22696;A22696) polyubiquitin 5 - yeast (Sacch... 62 1e-07
FM992690_680(FM992690|pid:none) Candida dubliniensis CD36 chromo... 62 1e-07
AY771321_1(AY771321|pid:none) Scleronephthya gracillimum ubuiqui... 62 1e-07
X98063_1(X98063|pid:none) P.sylvestris mRNA for polyubiquitin. 62 1e-07
AM441378_1(AM441378|pid:none) Vitis vinifera contig VV78X123789.... 62 1e-07
M31426_1(M31426|pid:none) Synthetic yeast (S.cerevisiae) ubiquit... 62 1e-07
DQ914563_1(DQ914563|pid:none) Porphyra yezoensis polyubiquitin (... 62 1e-07
CR382131_778(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 62 1e-07
EU967930_1(EU967930|pid:none) Zea mays clone 311453 40S ribosoma... 62 1e-07
L21898_1(L21898|pid:none) Brassica rapa ubiquitin/ribosomal prot... 62 1e-07
S62680(S62680)ubiquitin/ribosomal protein S27a fusion protein - ... 62 1e-07
EF145408_1(EF145408|pid:none) Populus trichocarpa clone WS01124_... 62 1e-07
AJ965263_1(AJ965263|pid:none) Isotricha prostoma partial mRNA fo... 62 1e-07
BT076736_1(BT076736|pid:none) Caligus rogercresseyi clone crog-e... 62 1e-07
AL031854_8(AL031854|pid:none) S.pombe chromosome II cosmid c337.... 62 1e-07
AJ965277_1(AJ965277|pid:none) Epidinium ecaudatum partial mRNA f... 62 1e-07
AB045755_1(AB045755|pid:none) Physarum polycephalum ppub1 mRNA f... 62 1e-07
AB021974_1(AB021974|pid:none) Bombyx mori UBI3 mRNA for polyubiq... 61 2e-07
BC168051_1(BC168051|pid:none) Xenopus tropicalis cDNA clone MGC:... 61 2e-07
AK010964_1(AK010964|pid:none) Mus musculus 13 days embryo liver ... 61 2e-07
AY552058_1(AY552058|pid:none) Aedes aegypti ribosomal protein S2... 61 2e-07
AM494972_376(AM494972|pid:none) Leishmania braziliensis chromoso... 61 2e-07
AB003730_1(AB003730|pid:none) Homo sapiens gene for polyubiquiti... 61 2e-07
(P19848) RecName: Full=Ubiquitin; &AB210844_1(AB210844|pid:none... 61 2e-07
AF506022_1(AF506022|pid:none) Tribolium castaneum isolate pCPUb ... 61 2e-07
AJ416499_1(AJ416499|pid:none) Pleurotus ostreatus partial mRNA f... 61 2e-07
DQ320121_3(DQ320121|pid:none) Binary vector pBINPLUS/ARS, comple... 61 2e-07
BC045004_1(BC045004|pid:none) Xenopus laevis similar to ubiquiti... 61 2e-07
AY118702_1(AY118702|pid:none) Drosophila melanogaster AT20865 fu... 61 2e-07
DQ019224_1(DQ019224|pid:none) Gracilaria lemaneiformis ubiquitin... 61 2e-07
BC006680_1(BC006680|pid:none) Mus musculus ubiquitin C, mRNA (cD... 61 2e-07
FN316698_1(FN316698|pid:none) Schistosoma japonicum isolate Anhu... 61 2e-07
BT057945_1(BT057945|pid:none) Salmo salar clone ssal-rgf-504-035... 61 2e-07
AB005240_15(AB005240|pid:none) Arabidopsis thaliana genomic DNA,... 61 2e-07
EU007433_1(EU007433|pid:none) Catharanthus roseus ubiquitin (UBQ... 61 2e-07
BC021837_1(BC021837|pid:none) Mus musculus ubiquitin C, mRNA (cD... 61 2e-07
AY086062_1(AY086062|pid:none) Arabidopsis thaliana clone 20908 m... 61 2e-07
AB122067_1(AB122067|pid:none) Crassostrea gigas mRNA for polyubi... 61 2e-07
AY813866_1(AY813866|pid:none) Schistosoma japonicum clone SJCHGC... 61 2e-07
AB098891_1(AB098891|pid:none) Bos taurus mRNA for similar to ubi... 61 2e-07
AL117514_1(AL117514|pid:none) Homo sapiens mRNA; cDNA DKFZp434K0... 61 2e-07
BC114001_1(BC114001|pid:none) Bos taurus polyubiquitin, mRNA (cD... 61 2e-07
BC093445_1(BC093445|pid:none) Homo sapiens ubiquitin C, mRNA (cD... 61 2e-07
AK007273_1(AK007273|pid:none) Mus musculus adult male testis cDN... 61 2e-07
AB009010_1(AB009010|pid:none) Homo sapiens UbC1 mRNA for polyubi... 61 2e-07
EU139240_1(EU139240|pid:none) Flustra foliacea ubiquinated putat... 61 2e-07
D63782_1(D63782|pid:none) Cricetulus sp. gene for polyubiquitin,... 61 2e-07
DQ216246_1(DQ216246|pid:none) Taeniopygia guttata clone 0058P001... 61 2e-07
BC054976_1(BC054976|pid:none) Xenopus laevis ubiquitin C, mRNA (... 61 2e-07
AP005393_13(AP005393|pid:none) Oryza sativa Japonica Group genom... 61 2e-07
BT058428_1(BT058428|pid:none) Salmo salar clone Contig656 Ubiqui... 61 2e-07
FN323948_1(FN323948|pid:none) Schistosoma japonicum isolate Anhu... 61 2e-07
DQ216239_1(DQ216239|pid:none) Taeniopygia guttata clone 0058P004... 61 2e-07
AM269955_93(AM269955|pid:none) Aspergillus niger contig An01c008... 61 2e-07
AF045474_1(AF045474|pid:none) Schistosoma mansoni polyubiquitin ... 61 2e-07
AY254344_1(AY254344|pid:none) Schistosoma japonicum polyubiquiti... 61 2e-07
M17597_1(M17597|pid:none) Human poly-ubiquitin mRNA, complete cds. 61 2e-07
BC080583_1(BC080583|pid:none) Homo sapiens cDNA clone IMAGE:2822... 61 2e-07
AF060501_1(AF060501|pid:none) Botryotinia fuckeliana polyubiquit... 61 2e-07
S34332(A72790;S34332) ubiquitin / ribosomal protein CEP52 (b) - ... 61 2e-07
AF528710_1(AF528710|pid:none) Arabidopsis thaliana ecotype Ita-0... 61 2e-07
AE014134_744(AE014134|pid:none) Drosophila melanogaster chromoso... 61 2e-07
BT048991_1(BT048991|pid:none) Salmo salar clone ssal-evf-534-259... 61 2e-07
AF361365_1(AF361365|pid:none) Oncorhynchus mykiss polyubiquitin ... 61 2e-07
D17296_1(D17296|pid:none) Rattus norvegicus mRNA for polyubiquit... 61 2e-07
AM049143_1(AM049143|pid:none) Dascillus cervinus mRNA for riboso... 61 2e-07
AF031628_1(AF031628|pid:none) Schizophyllum commune polyubiquiti... 61 2e-07
AM270080_13(AM270080|pid:none) Aspergillus niger contig An04c019... 61 2e-07
AB089615_1(AB089615|pid:none) Gorilla gorilla UbC gene for polyu... 61 2e-07
EF667355_1(EF667355|pid:none) Trypanosoma carassii ubiquitin-fus... 61 2e-07
UQKM(S06598;S19543;S21687) ubiquitin / ribosomal protein CEP52 -... 61 2e-07
U43128_1(U43128|pid:none) Naegleria fowleri ubiquitin mRNA, part... 61 2e-07
A29584(A29584) ubiquitin precursor - pig (fragment) &M18159_1(M... 61 2e-07
EU302560_1(EU302560|pid:none) Lineus viridis ribosomal protein r... 61 2e-07
DQ216252_1(DQ216252|pid:none) Taeniopygia guttata clone 0058P000... 61 2e-07
AB003731_1(AB003731|pid:none) Cricetulus griseus gene for polyub... 61 2e-07
FN316687_1(FN316687|pid:none) Schistosoma japonicum isolate Anhu... 61 2e-07
AE017351_259(AE017351|pid:none) Cryptococcus neoformans var. neo... 61 2e-07
AE014296_755(AE014296|pid:none) Drosophila melanogaster chromoso... 61 2e-07
FN357410_6(FN357410|pid:none) Schistosoma mansoni genome sequenc... 61 2e-07
U29158_1(U29158|pid:none) Zea mays polyubiquitin (MubC5) mRNA, c... 61 2e-07
BC103477_1(BC103477|pid:none) Rattus norvegicus ubiquitin C, mRN... 61 2e-07
FN315485_1(FN315485|pid:none) Schistosoma japonicum isolate Anhu... 61 2e-07
AF061807_1(AF061807|pid:none) Elaeagnus umbellata polyubiquitin ... 61 3e-07
AJ309010_1(AJ309010|pid:none) Nicotiana tabacum mRNA for polyubi... 61 3e-07
UQSY(S02222)ubiquitin precursor - soybean (fragment) 61 3e-07
EU348739_1(EU348739|pid:none) Adonis aestivalis var. palaestina ... 61 3e-07
AB045758_1(AB045758|pid:none) Physarum polycephalum ppub4 mRNA f... 61 3e-07
M23750_1(M23750|pid:none) D.discoideum ubiquitin mRNA, complete ... 61 3e-07
AF093505_1(AF093505|pid:none) Saccharum hybrid cultivar H32-8560... 61 3e-07
M74156_1(M74156|pid:none) Nicotiana sylvestris (clone 6PU4) pent... 61 3e-07
UQFS(S03599)ubiquitin precursor - common sunflower (fragment) 61 3e-07
EU125031_1(EU125031|pid:none) Eurythoe complanata ribosomal prot... 61 3e-07
DQ336883_1(DQ336883|pid:none) Zinnia elegans putative pentameric... 61 3e-07
S12161(S12161)polyubiquitin - large-leaved lupine (fragment) 61 3e-07
EU953492_1(EU953492|pid:none) Zea mays clone 1424191 unknown mRNA. 61 3e-07
S53719(S53719;S73107;S71069)polyubiquitin 6 - red alga (Gracilar... 61 3e-07
FN315482_1(FN315482|pid:none) Schistosoma japonicum isolate Anhu... 61 3e-07
AM466823_1(AM466823|pid:none) Vitis vinifera contig VV78X042351.... 61 3e-07
AL161503_16(AL161503|pid:none) Arabidopsis thaliana DNA chromoso... 61 3e-07
AP008215_960(AP008215|pid:none) Oryza sativa (japonica cultivar-... 61 3e-07
DQ813662_27(DQ813662|pid:none) Anticarsia gemmatalis nucleopolyh... 61 3e-07
CP000592_120(CP000592|pid:none) Ostreococcus lucimarinus CCE9901... 61 3e-07
JH0226(JH0226) ubiquitin / ribosomal protein S27a.1 - barley &M... 61 3e-07
AC115584_9(AC115584|pid:none) Dictyostelium discoideum chromosom... 61 3e-07
AF517848_1(AF517848|pid:none) Griffithsia japonica isolate Gj526... 61 3e-07
AB033601_1(AB033601|pid:none) Cucumis melo mRNA for polyubiquiti... 61 3e-07
AB045756_1(AB045756|pid:none) Physarum polycephalum ppub2 mRNA f... 61 3e-07
DQ517325_1(DQ517325|pid:none) Pectinaria gouldii ubiquitin/ribos... 61 3e-07
CP001037_2919(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 61 3e-07
EU328536_1(EU328536|pid:none) Lolium temulentum ubiquitin (UBQ) ... 61 3e-07
JQ1728(JQ1728)ubiquitin precursor - Arabidopsis thaliana (fragme... 61 3e-07
EU436761_1(EU436761|pid:none) Sandersonia aurantiaca clone SAND7... 61 3e-07
EU586198_1(EU586198|pid:none) Malus x domestica cultivar Fuji po... 61 3e-07
DQ118117_1(DQ118117|pid:none) Lupinus albus polyubiquitin mRNA, ... 61 3e-07
BT052956_1(BT052956|pid:none) Medicago truncatula clone MTYFL_FM... 61 3e-07
BT051458_1(BT051458|pid:none) Medicago truncatula clone MTYF1_F2... 61 3e-07
U29160_1(U29160|pid:none) Zea mays clone MubG10 ubiquitin fusion... 61 3e-07
AC152972_3(AC152972|pid:none) Oryza sativa (japonica cultivar-gr... 61 3e-07
UQJNI(S17740;S14579) ubiquitin precursor - Phytophthora infestan... 61 3e-07
AP007155_821(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 61 3e-07
DQ353761_1(DQ353761|pid:none) Ictalurus punctatus isolate C16JH0... 61 3e-07
U84969_1(U84969|pid:none) Arabidopsis thaliana ubiquitin (UBQ11)... 61 3e-07
S42643(S42643)ubiquitin / ribosomal protein S27a - potato (fragm... 61 3e-07
BC019850_1(BC019850|pid:none) Mus musculus ubiquitin B, mRNA (cD... 61 3e-07
CR954212_116(CR954212|pid:none) Ostreococcus tauri strain OTTH05... 61 3e-07
EU081898_1(EU081898|pid:none) Triticum aestivum polyubiquitin (W... 61 3e-07
AY375335_1(AY375335|pid:none) Gossypium barbadense fiber polyubi... 61 3e-07
AF502576_1(AF502576|pid:none) Musa acuminata ubiquitin (UBQ2) ge... 61 3e-07
AY042884_1(AY042884|pid:none) Arabidopsis thaliana Unknown prote... 61 3e-07
AF528678_1(AF528678|pid:none) Arabidopsis lyrata putative polyub... 61 3e-07
AF035383_1(AF035383|pid:none) Arabidopsis thaliana polyubiquitin... 61 3e-07
DQ887067_1(DQ887067|pid:none) Arachis hypogaea polyubiquitin 10 ... 61 3e-07
AL662988_4(AL662988|pid:none) Oryza sativa genomic DNA, chromoso... 61 3e-07
EF147813_1(EF147813|pid:none) Populus trichocarpa clone WS0125_D... 61 3e-07
T12035(T12035) polyubiquitin 4.4 - kidney bean &U77939_1(U77939... 61 3e-07
EU952265_1(EU952265|pid:none) Zea mays clone 1273639 unknown mRNA. 61 3e-07
AY954394_1(AY954394|pid:none) Oryza sativa (japonica cultivar-gr... 61 3e-07
DQ267236_1(DQ267236|pid:none) Tragopogon dubius clone TDUBUBQ pu... 61 3e-07
AF429429_1(AF429429|pid:none) Olea europaea polyubiquitin OUB1 m... 61 3e-07
U03705_1(U03705|pid:none) Elphidium clavatum incertum ubiquitin ... 61 3e-07
DQ793132_1(DQ793132|pid:none) Arabidopsis thaliana ubiquitin (UB... 61 3e-07
AY785814_1(AY785814|pid:none) Oryza sativa (indica cultivar-grou... 61 3e-07
AF240445_1(AF240445|pid:none) Populus tremula x Populus tremuloi... 61 3e-07
EU586196_1(EU586196|pid:none) Malus x domestica cultivar Fuji po... 61 3e-07
AF528705_1(AF528705|pid:none) Arabidopsis thaliana ecotype Lisse... 61 3e-07
U26831_1(U26831|pid:none) Solanum tuberosum polyubiquitin gene, ... 61 3e-07
FN320998_1(FN320998|pid:none) Schistosoma japonicum isolate Anhu... 61 3e-07
AJ437537_1(AJ437537|pid:none) Oryza sativa partial mRNA for poly... 61 3e-07
BT000701_1(BT000701|pid:none) Arabidopsis thaliana clone RAFL08-... 61 3e-07
CP001333_164(CP001333|pid:none) Micromonas sp. RCC299 chromosome... 61 3e-07
AY478418_1(AY478418|pid:none) Clusia minor polyubiquitin (Ubq1) ... 61 3e-07
(P42740) RecName: Full=Ubiquitin; 61 3e-07
AJ844617_1(AJ844617|pid:none) Plantago major mRNA for polyubiqui... 61 3e-07
DQ445914_1(DQ445914|pid:none) Gladiolus grandiflorus polyubiquit... 61 3e-07
S17436(S17436) ubiquitin precursor UbB2 - common sunflower (frag... 61 3e-07
EF676128_1(EF676128|pid:none) Picea sitchensis clone WS02711_O04... 61 3e-07
AY957885_1(AY957885|pid:none) Gracilaria lemaneiformis polyubiqu... 61 3e-07
DQ830978_1(DQ830978|pid:none) Nicotiana tabacum ubiquitin (UB1) ... 61 3e-07
AB045757_1(AB045757|pid:none) Physarum polycephalum ppub3 mRNA f... 61 3e-07
AB090878_1(AB090878|pid:none) Aster tripolium mRNA for polyubiqu... 61 3e-07
AF184279_1(AF184279|pid:none) Oryza sativa polyubiquitin (RUBQ1)... 61 3e-07
AF436850_1(AF436850|pid:none) Cucumis melo polyubiquitin mRNA, p... 61 3e-07
AF517849_1(AF517849|pid:none) Griffithsia japonica isolate Gj532... 61 3e-07
AY117055_1(AY117055|pid:none) Gossypium herbaceum putative polyu... 61 3e-07
AP008212_1813(AP008212|pid:none) Oryza sativa (japonica cultivar... 61 3e-07
AY098526_1(AY098526|pid:none) Ananas comosus tetrameric ubiquiti... 61 3e-07
L81141_1(L81141|pid:none) Pisum sativum (Alaska) ubiquitin (PUB3... 61 3e-07
(P22589) RecName: Full=Ubiquitin; 61 3e-07
AY275680_1(AY275680|pid:none) Hevea brasiliensis ubiquitin mRNA,... 61 3e-07
AF088848_1(AF088848|pid:none) Capsicum chinense polyubiquitin (U... 61 3e-07
AY297059_1(AY297059|pid:none) Triticum aestivum ubiquitin (WUB1)... 61 3e-07
EU972519_1(EU972519|pid:none) Zea mays clone 382655 unknown mRNA. 61 3e-07
DQ793134_1(DQ793134|pid:none) Arabidopsis thaliana ubiquitin (UB... 61 3e-07
BT052981_1(BT052981|pid:none) Medicago truncatula clone MTYFL_FM... 61 3e-07
AC004512_13(AC004512|pid:none) Arabidopsis thaliana chromosome 1... 61 3e-07
EF576109_1(EF576109|pid:none) Oryza sativa (indica cultivar-grou... 61 3e-07
D12776_1(D12776|pid:none) Oryza sativa Japonica Group mRNA for p... 61 3e-07
EF145885_1(EF145885|pid:none) Populus trichocarpa clone WS0114_A... 61 3e-07
AY751539_1(AY751539|pid:none) Cloning vector pHUE, complete sequ... 61 3e-07
A25062(A25062) ubiquitin precursor - barley (fragment) &X04133_... 61 3e-07
AJ277169_1(AJ277169|pid:none) Galdieria sulphuraria mRNA for ubi... 61 3e-07
S30151(S30151;S30152) polyubiquitin 6 - parsley &X64344_1(X6434... 61 3e-07
AJ937554_1(AJ937554|pid:none) Collozoum inerme partial pub gene,... 61 3e-07
EF470423_1(EF470423|pid:none) Lolium perenne ubiquitin (UBQ) mRN... 61 3e-07
EU952980_1(EU952980|pid:none) Zea mays clone 1372904 unknown mRNA. 61 3e-07
S17435(S17435;S17437) polyubiquitin 6 - common sunflower &X5700... 61 3e-07
S34285(S34285) polyubiquitin - tomato &X73156_1(X73156|pid:none) 61 3e-07
EF576130_1(EF576130|pid:none) Oryza sativa (indica cultivar-grou... 61 3e-07
BT071477_1(BT071477|pid:none) Picea sitchensis clone WS02916_A12... 61 3e-07
AP005190_3(AP005190|pid:none) Oryza sativa Japonica Group genomi... 61 3e-07
FN315480_1(FN315480|pid:none) Schistosoma japonicum isolate Anhu... 60 3e-07
FN316690_1(FN316690|pid:none) Schistosoma japonicum isolate Anhu... 60 3e-07
FJ438516_1(FJ438516|pid:none) Epinephelus coioides ubiquitin C v... 60 3e-07
S40611(S40611;S34707) polyubiquitin 5 - Volvox carteri &X74214_... 60 3e-07
M22214_1(M22214|pid:none) Synthetic human ubiquitin gene (Phe4- ... 60 3e-07
AY752852_1(AY752852|pid:none) Culicoides sonorensis clone CsUB1 ... 60 3e-07
AB170649_1(AB170649|pid:none) Macaca fascicularis brain cDNA clo... 60 3e-07
FN323957_1(FN323957|pid:none) Schistosoma japonicum isolate Anhu... 60 3e-07
FN315486_1(FN315486|pid:none) Schistosoma japonicum isolate Anhu... 60 3e-07
AK300882_1(AK300882|pid:none) Homo sapiens cDNA FLJ51326 complet... 60 3e-07
FN316688_1(FN316688|pid:none) Schistosoma japonicum isolate Anhu... 60 3e-07
AF104020_1(AF104020|pid:none) Bovine viral diarrhea virus-2 subg... 60 3e-07
BT058181_1(BT058181|pid:none) Salmo salar clone Contig1385 Ubiqu... 60 3e-07
AY819759_1(AY819759|pid:none) Homo sapiens ubiquitin C splice va... 60 3e-07
AM117573_1(AM117573|pid:none) Paralvinella grasslei partial gene... 60 3e-07
AF321441_1(AF321441|pid:none) Galleria mellonella polyubiquitin ... 60 3e-07
Z28649_1(Z28649|pid:none) Acetabularia cliftonii gene for polyub... 60 3e-07
AK003190_1(AK003190|pid:none) Mus musculus 18-day embryo whole b... 60 3e-07
BT058174_1(BT058174|pid:none) Salmo salar clone Contig1232 Ubiqu... 60 3e-07
FN316689_1(FN316689|pid:none) Schistosoma japonicum isolate Anhu... 60 3e-07
S34334(C72790;S34334) ubiquitin - Leishmania tarentolae &X73120... 60 3e-07
AY048769_1(AY048769|pid:none) Choristoneura fumiferana granulovi... 60 3e-07
DQ216251_1(DQ216251|pid:none) Taeniopygia guttata clone 0063P002... 60 3e-07
BT073770_1(BT073770|pid:none) Oncorhynchus mykiss clone omyk-evo... 60 3e-07
S11296(S11296)polyubiquitin (clone arf3) - mouse (fragment) 60 3e-07
DQ673439_1(DQ673439|pid:none) Diaphorina citri putative ubiquiti... 60 3e-07
AY394942_1(AY394942|pid:none) Danio rerio clone RK046A2G11 ubiqu... 60 3e-07
AK013873_1(AK013873|pid:none) Mus musculus 12 days embryo head c... 60 3e-07
AF104026_1(AF104026|pid:none) Bovine viral diarrhea virus-2 subg... 60 3e-07
EF473650_1(EF473650|pid:none) Sus scrofa ubiquitin B (UBB) gene,... 60 3e-07
AK168448_1(AK168448|pid:none) Mus musculus 17 days embryo kidney... 60 3e-07
AB099083_1(AB099083|pid:none) Bos taurus mRNA for similar to pol... 60 3e-07
FN316697_1(FN316697|pid:none) Schistosoma japonicum isolate Anhu... 60 3e-07
FN322451_1(FN322451|pid:none) Schistosoma japonicum isolate Anhu... 60 3e-07
DQ216234_1(DQ216234|pid:none) Taeniopygia guttata clone 0058P001... 60 3e-07
AY732488_1(AY732488|pid:none) Homo sapiens ubiquitin C splice va... 60 3e-07
BC157791_1(BC157791|pid:none) Xenopus tropicalis hypothetical pr... 60 3e-07
(P0C274) RecName: Full=Ubiquitin; &(P62972) RecName: Fu &(P6297... 60 3e-07
FN323949_1(FN323949|pid:none) Schistosoma japonicum isolate Anhu... 60 3e-07
AY452182_1(AY452182|pid:none) Plasmodiophora brassicae polyubiqu... 60 3e-07
CR940347_507(CR940347|pid:none) Theileria annulata strain Ankara... 60 3e-07
AF104023_1(AF104023|pid:none) Bovine viral diarrhea virus-2 subg... 60 3e-07
AY571670_1(AY571670|pid:none) Gromia oviformis polyubiquitin gen... 60 3e-07
L13783_1(L13783|pid:none) Bovine viral diarrhea virus p125 prote... 60 3e-07
BT075650_1(BT075650|pid:none) Osmerus mordax clone omor-rgc-508-... 60 3e-07
AF104024_1(AF104024|pid:none) Bovine viral diarrhea virus-2 subg... 60 3e-07
X94621_1(X94621|pid:none) C.alpestris ubiquitin gene. 60 3e-07
X08013_1(X08013|pid:none) Chinese hamster mRNA for ubiquitin. 60 3e-07
UQUTC(S00510) ubiquitin precursor - Trypanosoma cruzi (fragment)... 60 3e-07
DQ216250_1(DQ216250|pid:none) Taeniopygia guttata clone 0058P002... 60 3e-07
A62334_1(A62334|pid:none) Sequence 22 from Patent WO9712992. &A... 60 3e-07
DQ420617_1(DQ420617|pid:none) Anser anser ubiquitin C II mRNA, c... 60 3e-07
AB098769_1(AB098769|pid:none) Bos taurus mRNA for similar to pol... 60 3e-07
FN323968_1(FN323968|pid:none) Schistosoma japonicum isolate Anhu... 60 3e-07
X02650_1(X02650|pid:none) Chicken mRNA for ubiquitin. 60 3e-07
M62429_1(M62429|pid:none) Bovine polyubiquitin mRNA, 3' end, clo... 60 3e-07
U61404_1(U61404|pid:none) Manduca sexta polyubiquitin gene, 5' r... 60 3e-07
AJ937553_1(AJ937553|pid:none) Collozoum inerme partial pub gene,... 60 3e-07
AB111967_1(AB111967|pid:none) Bovine viral diarrhea virus T-20 g... 60 3e-07
M11691_1(M11691|pid:none) Synthetic beta-galactosidase/mouse ubi... 60 3e-07
FN316696_1(FN316696|pid:none) Schistosoma japonicum isolate Anhu... 60 3e-07
S32020(S32020) polyubiquitin 6 - Geodia cydonium &X70917_1(X709... 60 3e-07
AB099044_1(AB099044|pid:none) Bos taurus mRNA for similar to pol... 60 3e-07
AF104025_1(AF104025|pid:none) Bovine viral diarrhea virus-2 subg... 60 3e-07
BT058528_1(BT058528|pid:none) Salmo salar clone Contig1643 Ubiqu... 60 3e-07
(Q05550) RecName: Full=Ubiquitin; &Z14232_1(Z14232|pid:none) 60 3e-07
(P42739) RecName: Full=Ubiquitin; 60 3e-07
FN357410_7(FN357410|pid:none) Schistosoma mansoni genome sequenc... 60 3e-07
DQ216243_1(DQ216243|pid:none) Taeniopygia guttata clone 0058P001... 60 3e-07
EU306853_1(EU306853|pid:none) Drosophila silvestris clone sv3E-T... 60 3e-07
AK056939_1(AK056939|pid:none) Homo sapiens cDNA FLJ32377 fis, cl... 60 3e-07
AF104022_1(AF104022|pid:none) Bovine viral diarrhea virus-2 subg... 60 3e-07
DQ216232_1(DQ216232|pid:none) Taeniopygia guttata clone 0058P006... 60 3e-07
AY891423_1(AY891423|pid:none) Synthetic construct Homo sapiens c... 60 3e-07
FN323975_1(FN323975|pid:none) Schistosoma japonicum isolate Anhu... 60 3e-07
DQ278173_1(DQ278173|pid:none) Theileria lestoquardi clone 34 unk... 60 3e-07
A31560(A31560) polyuciquitin - fruit fly (Drosophila melanogaste... 60 3e-07
DQ216235_1(DQ216235|pid:none) Taeniopygia guttata clone 0058P004... 60 3e-07
U03701_1(U03701|pid:none) Stephanodiscus yellowstonensis ubiquit... 60 3e-07
FN321000_1(FN321000|pid:none) Schistosoma japonicum isolate Anhu... 60 3e-07
BT076264_1(BT076264|pid:none) Caligus rogercresseyi clone crog-e... 60 3e-07
S18535(S18535) ubiquitin / ribosomal protein CEP52 - Tetrahymena... 60 4e-07
AF034789_1(AF034789|pid:none) Amoeba proteus polyubiquitin mRNA,... 60 4e-07
Y12081_1(Y12081|pid:none) Suberites domuncula mRNA for polyubiqu... 60 4e-07
AM040013_1(AM040013|pid:none) Curculio glandium partial mRNA for... 60 4e-07
(P0C033) RecName: Full=Ubiquitin-like protein 1; 60 4e-07
AY099126_1(AY099126|pid:none) Lotharella globosa isolate pub1 po... 60 4e-07
AY862433_1(AY862433|pid:none) Navicula pelliculosa polyubiquitin... 60 4e-07
AJ871355_1(AJ871355|pid:none) Nyctotherus ovalis partial gene fo... 60 4e-07
AM910995_106(AM910995|pid:none) Plasmodium knowlesi strain H chr... 60 4e-07
DQ115333_1(DQ115333|pid:none) Caenorhabditis remanei ubiquitin p... 60 4e-07
JC5226(JC5226) ubiquitin / ribosomal protein CEP52 - Acropora mi... 60 4e-07
S43306(S43306)polyubiquitin 6 - Geodia cydonium 60 4e-07
EF101928_203(EF101928|pid:none) Acanthocystis turfacea Chlorella... 60 4e-07
DQ413200_1(DQ413200|pid:none) Acyrthosiphon pisum isolate WHAP00... 60 4e-07
EU428780_1(EU428780|pid:none) Plutella xylostella ubiquitin gene... 60 4e-07
(P23324) RecName: Full=Ubiquitin; 60 4e-07
AY251801_1(AY251801|pid:none) Lotharella globosa ubiquitin/actin... 60 4e-07
(P14792) RecName: Full=Ubiquitin; &(P59669) RecName: Fu &EF1015... 60 4e-07
AY485340_1(AY485340|pid:none) Schistosoma mansoni ubiquitin mRNA... 60 4e-07
BT073733_1(BT073733|pid:none) Oncorhynchus mykiss clone omyk-evo... 60 4e-07
Y12082_1(Y12082|pid:none) Suberites domuncula mRNA for polyubiqu... 60 4e-07
DQ504428_22(DQ504428|pid:none) Clanis bilineata nucleopolyhedros... 60 4e-07
AY251796_1(AY251796|pid:none) Lotharella amoeboformis ubiquitin/... 60 4e-07
T16144(T16144) ubiquitin - Caenorhabditis elegans &U23172_1(U23... 60 4e-07
AF469060_1(AF469060|pid:none) Heterodera glycines ubiquitin exte... 60 4e-07
>AE016820_243(AE016820|pid:none) Ashbya gossypii (= Eremothecium
gossypii) ATCC 10895 chromosome VII, complete sequence.
Length = 152
Score = 72.4 bits (176), Expect = 8e-11
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Frame = +2
Query: 2150 INIKYMAGRIIQLKVSDETTIGELQQMIMDRDGLPPSSQRLFYLNKQIDSNATMKLKEFS 2329
I +K + G+ I L+V TI ++ I D++G+PP QRL + KQ++ T L +++
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT--LSDYN 60
Query: 2330 IVNKATLNLVIRLHGGTNTPPSDDKPLAQDLNKPIRVRSNFMPLAYFGSLNTNQDGKVT- 2506
I ++TL+LV+RL GG K K I+ + + LA G N + +GKVT
Sbjct: 61 IQKESTLHLVLRLRGG----GKKRKKKVYTTPKKIKHKHKKVKLAILGLFNVDAEGKVTK 116
Query: 2507 FTYKLPDNLSTFRVMALVHYGKDQFGSCEHTFI 2605
+ P + H + G C TF+
Sbjct: 117 LRRECPTETCGAGIFLADHKTRHYCGKCHATFM 149
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 4,150,912,914
Number of extensions: 80961902
Number of successful extensions: 183845
Number of sequences better than 10.0: 809
Number of HSP's gapped: 183720
Number of HSP's successfully gapped: 1722
Length of query: 919
Length of database: 1,040,966,779
Length adjustment: 138
Effective length of query: 781
Effective length of database: 598,775,449
Effective search space: 467643625669
Effective search space used: 467643625669
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
2 |
| VF (FL, S) |
0 |
| AH (FL, L) |
4 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
1 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |