>Contig-U11167-1 (Contig-U11167-1Q) /CSM_Contig/Contig-U11167-1Q.Seq.d
AATTTTATTTTTTATTTTTTTTTCTATTAAGTAAACACACAAATAAAAAC
ATATTACATCAATTTTTATTTTATATTTATTTCTTTTTCAACTTTAATTA
AATAGTAACAATAAAAAAATAAAACAAATTTTAAAAAAAAAA--------
--TAAATGGCAAAATACACCACAAGGTAGATTATTTGAAGGTCAATTAGA
TTTATTAACAAAGAAAGAGGATATGTTAAAAGGTATTACATACACTATTG
ATGCACAATTATTTGAACCAACATTTTTACAAAAAACTGCATCATTCTTA
TTATTTGCAACAAATTGGATATTAAAAGTAATCAATCCAAAGAATACACC
ATTACCATTACCATTACCTGCTCCACCACAATTTGCAGCTTTACCAGAGT
TTTGTATTGAGGATATTGTTGATTTCTTTACTTTTGTTATAACTAATTTT
AGTCAAGTTTTACAATATATTAAATTAGAACAATTAATGAAATTTTTTAT
TACAATTTTAGCAACACCAGAATATGTTAAGAATCCATATTTGAAAGCAA
AGATTATTGAAATTATTTCACAATTTGTACCAAGTAAATATTCAAAAGGT
AATCCAATATTGTTAGAGTGTAATCAAGATGTAAAGGATCATATGGTATT
GGCATTAATGAGATTCTATGTGGACATTGAGTTCACTGGTGGTCATAATC
AATTTTATGAAAAGTTTTCATATCGTCATTATAGTAGTTTAATTCTTAAA
TATCTTTGGTCAATTCCAGACTTTAGAAAGAAATTCACTGAAACTCCAAA
GGATCCAATATTTATTAAATTCATTAATATGTTAATCAATGATTCAATTT
ATGTTTTAGATGAAGCACTTGCTAAATTAGCTAAAATTAAAGAAAATCAA
ACTTTATTTGACGATCCAAATTGGGATAAAGATTTAACACCTGAACAAAG
AAAAGAAAAAATTGAACAAAATGATTTAAATGAAAGAATTTGTAAATCAA
ATTTAAGTTTAGCAAATAGTAATATTGATATGATGTTATTTTTATCAAGT
GATAAAACCATTATTAGTGGATTTATGAGACCAGAATTAATTGATAGAAT
TTCAGCAATGATGAATTATTTCTTAGCATTAATTGTTGGTCCAAAATGTA
CAAATCTCAAAGTAAGAGAACCAGAGAAATATCATTTCAATCCAAAGGTA
TTATTGAATCAATTAACAGAGATCTATGTAAACTTTGGTAGAGATCCAAG
ATTCTTACAATCAGTGGTTAGAGATGGTAGATCCTTCAAGAATTCATTGT
TCCAAACTTGTGAAAAGATTCTTCAAAGAGAAAGGTTAAAGAATGACCAT
GAATTGGATGAATTCTCAAAATTGGTCATTAAACTTGAACAAGTCGCCAA
AGAGGAAGAACAAGCTGAAGAAGATCTTGGTGATATTCCAGATGAATTCT
GTGATCCAATCTTATCAACTCTTATGACTGATCCTGTCATTTTACCATCA
AGTAAAACCGTTATCGATAGACAAACTATCCTTAGACATTTACTTAGTGA
TCAAACTGATCCTTTCAATAGATCTCATTTAACCCCTGAAATGTTAATTG
ATGATGTTGAAACAAAGAAAAAAATTGATGAATGGTTAGCTTCAAAGAAA
AAACAATAAAATCATTATTTCCATCCTTTTTTTTTTTTTTGATATAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

est1=VHO789F,-21,142
est2=SFG722F,1,142
est3=SHA482F,7,142
est4=AHA887F,13,142
est5=AHH493F,14,142
est6=VHF810F,14,142
est7=AHJ456F,15,142
est8=SHK880F,23,142
est9=AHC373F,24,142
est10=AHD228F,24,142
est11=AHI389F,24,142
est12=CFH639F,24,142
est13=AHF260F,26,142
est14=VHJ855F,26,142
est15=VSI783F,28,142
est16=AHG701F,33,142
est17=CHO472F,33,142
est18=CFD318F,143,753
est19=AHK419Z,161,713
est20=CHG404Z,164,763
est21=SHK880Z,164,725
est22=AHD228Z,165,727
est23=AHA887Z,169,720
est24=VHO789Z,182,680
est25=SFG722Z,184,851
est26=VHJ855Z,205,728
est27=AFC109F,236,877
est28=CHO472Z,257,735
est29=VHF810Z,273,724
est30=CFJ420F,318,976
est31=AHC373Z,430,724
est32=VFD233F,584,1235
est33=AHM108Z,794,1575
est34=AHQ423Z,875,1480
est35=SSI546Z,1164,1735

ilffiffsik*thk*khitsifilylflfql*LNSNNKKIKQILKKK---

---KWQNTPQGRLFEGQLDLLTKKEDMLKGITYTIDAQLFEPTFLQKTASFLLFATNWIL
KVINPKNTPLPLPLPAPPQFAALPEFCIEDIVDFFTFVITNFSQVLQYIKLEQLMKFFIT
ILATPEYVKNPYLKAKIIEIISQFVPSKYSKGNPILLECNQDVKDHMVLALMRFYVDIEF
TGGHNQFYEKFSYRHYSSLILKYLWSIPDFRKKFTETPKDPIFIKFINMLINDSIYVLDE
ALAKLAKIKENQTLFDDPNWDKDLTPEQRKEKIEQNDLNERICKSNLSLANSNIDMMLFL
SSDKTIISGFMRPELIDRISAMMNYFLALIVGPKCTNLKVREPEKYHFNPKVLLNQLTEI
YVNFGRDPRFLQSVVRDGRSFKNSLFQTCEKILQRERLKNDHELDEFSKLVIKLEQVAKE
EEQAEEDLGDIPDEFCDPILSTLMTDPVILPSSKTVIDRQTILRHLLSDQTDPFNRSHLT
PEMLIDDVETKKKIDEWLASKKKQ*nhyfhpffff*ykkkkkkkkkkkkkkkk

Frame A:
nfifyfffy*vntqiktyyinfyfifisfstlik**q*knktnfkkk---

---*makyttr*ii*rsirfinkergyvkryyihy*ctii*tniftknciiliicnkldi
ksnqskeytitititcstticsftrvly*gyc*flyfcyn*f*ssftiy*irtineifyy
nfsntric*esifeskdy*nyftictk*ifkr*snivrv*srckgsygigineilcgh*v
hwws*sil*kvfissl**fns*islvnsrl*keih*nskgsniy*ih*yvnq*fnlcfr*
stc*is*n*rksnfi*rsklg*rfnt*tkkrkn*tk*fk*knl*ikfkfsk**y*ydvif
ik**nhy*wiyetrin**nfsndelflsincwskmyksqskrtreisfqskgiiesinrd
lcklw*rskiltisg*rw*ilqefivpnl*kdsskrkvke*p*ig*ilkigh*t*tsrqr
grts*rrsw*ysr*il*snlinsyd*schftik*nryr*tnyp*tft**sn*sfq*isfn
p*nvn**c*nkekn**mvsfkektikslfpsffffli*kkkkkkkkkkkkkkk

Frame B:
ilffiffsik*thk*khitsifilylflfql*LNSNNKKIKQILKKK---

---KWQNTPQGRLFEGQLDLLTKKEDMLKGITYTIDAQLFEPTFLQKTASFLLFATNWIL
KVINPKNTPLPLPLPAPPQFAALPEFCIEDIVDFFTFVITNFSQVLQYIKLEQLMKFFIT
ILATPEYVKNPYLKAKIIEIISQFVPSKYSKGNPILLECNQDVKDHMVLALMRFYVDIEF
TGGHNQFYEKFSYRHYSSLILKYLWSIPDFRKKFTETPKDPIFIKFINMLINDSIYVLDE
ALAKLAKIKENQTLFDDPNWDKDLTPEQRKEKIEQNDLNERICKSNLSLANSNIDMMLFL
SSDKTIISGFMRPELIDRISAMMNYFLALIVGPKCTNLKVREPEKYHFNPKVLLNQLTEI
YVNFGRDPRFLQSVVRDGRSFKNSLFQTCEKILQRERLKNDHELDEFSKLVIKLEQVAKE
EEQAEEDLGDIPDEFCDPILSTLMTDPVILPSSKTVIDRQTILRHLLSDQTDPFNRSHLT
PEMLIDDVETKKKIDEWLASKKKQ*nhyfhpffff*ykkkkkkkkkkkkkkkk

Frame C:
fyflfffllskhtnknilhqflfyiyfffnfn*ivtikk*nkf*kk---

---ngkihhkvdylkvn*iy*qrkric*kvlhtllmhnylnqhfykklhhsyylqqigy*
k*siqrihhyhyhyllhhnlqlyqsfvlrillisllll*lilvkfyniln*nn**nfllq
f*qhqnmlrihi*kqrllklfhnlyqvniqkviqyc*svikm*riiwywh**dsmwtlss
lvviinfmksfhiviivv*flnifgqfqtlernslklqriqyllnslic*smiqfmf*mk
hlln*lklkkiklyltiqigiki*hlnkekkklnkmi*mkefvnqi*v*qivili*cyfy
qvikpllvdl*dqn*liefqq**iis*h*llvqnvqisk*enqrniisiqryy*in*qrs
m*tlveiqdsynqwlemvdpsrihcsklvkrffkekg*rmtmnwmnsqnwslnlnkspkr
knklkkilvifqmnsviqsyqll*lilsfyhqvkplsidklsldiylviklilsidli*p
lkc*lmmlkqrkklmng*lqrknnkiiisilffffdikkkkkkkkkkkkkkkk

Query= Contig-U11167-1 (Contig-U11167-1Q)
/CSM_Contig/Contig-U11167-1Q.Seq.d
         (1744 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U11167-1 (Contig-U11167-1Q) /CSM_Contig/Conti...  1564  0.0
Contig-U14635-1 (Contig-U14635-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U12474-1 (Contig-U12474-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U12427-1 (Contig-U12427-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U12319-1 (Contig-U12319-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U11312-1 (Contig-U11312-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U10361-1 (Contig-U10361-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U13348-1 (Contig-U13348-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U13206-1 (Contig-U13206-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U12435-1 (Contig-U12435-1Q) /CSM_Contig/Conti...    40  0.008

>Contig-U11167-1 (Contig-U11167-1Q) /CSM_Contig/Contig-U11167-1Q.Seq.d
          Length = 1744

 Score = 1564 bits (789), Expect = 0.0
 Identities = 789/789 (100%)
 Strand = Plus / Plus

                                                                       
Query: 153 taaatggcaaaatacaccacaaggtagattatttgaaggtcaattagatttattaacaaa 212
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 taaatggcaaaatacaccacaaggtagattatttgaaggtcaattagatttattaacaaa 212

                                                                       
Query: 213 gaaagaggatatgttaaaaggtattacatacactattgatgcacaattatttgaaccaac 272
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gaaagaggatatgttaaaaggtattacatacactattgatgcacaattatttgaaccaac 272

                                                                       
Query: 273 atttttacaaaaaactgcatcattcttattatttgcaacaaattggatattaaaagtaat 332
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 atttttacaaaaaactgcatcattcttattatttgcaacaaattggatattaaaagtaat 332

                                                                       
Query: 333 caatccaaagaatacaccattaccattaccattacctgctccaccacaatttgcagcttt 392
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 caatccaaagaatacaccattaccattaccattacctgctccaccacaatttgcagcttt 392

                                                                       
Query: 393 accagagttttgtattgaggatattgttgatttctttacttttgttataactaattttag 452
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 accagagttttgtattgaggatattgttgatttctttacttttgttataactaattttag 452

                                                                       
Query: 453 tcaagttttacaatatattaaattagaacaattaatgaaattttttattacaattttagc 512
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tcaagttttacaatatattaaattagaacaattaatgaaattttttattacaattttagc 512

                                                                       
Query: 513 aacaccagaatatgttaagaatccatatttgaaagcaaagattattgaaattatttcaca 572
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 aacaccagaatatgttaagaatccatatttgaaagcaaagattattgaaattatttcaca 572

                                                                       
Query: 573 atttgtaccaagtaaatattcaaaaggtaatccaatattgttagagtgtaatcaagatgt 632
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 atttgtaccaagtaaatattcaaaaggtaatccaatattgttagagtgtaatcaagatgt 632

                                                                       
Query: 633 aaaggatcatatggtattggcattaatgagattctatgtggacattgagttcactggtgg 692
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 aaaggatcatatggtattggcattaatgagattctatgtggacattgagttcactggtgg 692

                                                                       
Query: 693 tcataatcaattttatgaaaagttttcatatcgtcattatagtagtttaattcttaaata 752
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 tcataatcaattttatgaaaagttttcatatcgtcattatagtagtttaattcttaaata 752

                                                                       
Query: 753 tctttggtcaattccagactttagaaagaaattcactgaaactccaaaggatccaatatt 812
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 tctttggtcaattccagactttagaaagaaattcactgaaactccaaaggatccaatatt 812

                                                                       
Query: 813 tattaaattcattaatatgttaatcaatgattcaatttatgttttagatgaagcacttgc 872
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 tattaaattcattaatatgttaatcaatgattcaatttatgttttagatgaagcacttgc 872

                                                                       
Query: 873 taaattagctaaaattaaagaaaatcaaactttatttgacgatccaaattgggataaaga 932
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 taaattagctaaaattaaagaaaatcaaactttatttgacgatccaaattgggataaaga 932

                    
Query: 933 tttaacacc 941
           |||||||||
Sbjct: 933 tttaacacc 941


 Score = 1296 bits (654), Expect = 0.0
 Identities = 668/675 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1002 tttaagtttagcaaatagtaatattgatatgatgttatttttatcaagtgataaaaccat 1061
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 tttaagtttagcaaatagtaatattgatatgatgttatttttatcaagtgataaaaccat 1061

                                                                        
Query: 1062 tattagtggatttatgagaccagaattaattgatagaatttcagcaatgatgaattattt 1121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 tattagtggatttatgagaccagaattaattgatagaatttcagcaatgatgaattattt 1121

                                                                        
Query: 1122 cttagcattaattgttggtccaaaatgtacaaatctcaaagtaagagaaccagagaaata 1181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 cttagcattaattgttggtccaaaatgtacaaatctcaaagtaagagaaccagagaaata 1181

                                                                        
Query: 1182 tcatttcaatccaaaggtattattgaatcaattaacagagatctatgtaaactttggtag 1241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1182 tcatttcaatccaaaggtattattgaatcaattaacagagatctatgtaaactttggtag 1241

                                                                        
Query: 1242 agatccaagattcttacaatcagtggttagagatggtagatccttcaagaattcattgtt 1301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 agatccaagattcttacaatcagtggttagagatggtagatccttcaagaattcattgtt 1301

                                                                        
Query: 1302 ccaaacttgtgaaaagattcttcaaagagaaaggttaaagaatgaccatgaattggatga 1361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1302 ccaaacttgtgaaaagattcttcaaagagaaaggttaaagaatgaccatgaattggatga 1361

                                                                        
Query: 1362 attctcaaaattggtcattaaacttgaacaagtcgccaaagaggaagaacaagctgaaga 1421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1362 attctcaaaattggtcattaaacttgaacaagtcgccaaagaggaagaacaagctgaaga 1421

                                                                        
Query: 1422 agatcttggtgatattccagatgaattctgtgatccaatcttatcaactcttatgactga 1481
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1422 agatcttggtgatattccagatgaattctgtgatccaatcttatcaactcttatgactga 1481

                                                                        
Query: 1482 tcctgtcattttaccatcaagtaaaaccgttatcgatagacaaactatccttagacattt 1541
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1482 tcctgtcattttaccatcaagtaaaaccgttatcgatagacaaactatccttagacattt 1541

                                                                        
Query: 1542 acttagtgatcaaactgatcctttcaatagatctcatttaacccctgaaatgttaattga 1601
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1542 acttagtgatcaaactgatcctttcaatagatctcatttaacccctgaaatgttaattga 1601

                                                                        
Query: 1602 tgatgttgaaacaaagnnnnnnnttgatgaatggttagcttcaaagaaaaaacaataaaa 1661
            ||||||||||||||||       |||||||||||||||||||||||||||||||||||||
Sbjct: 1602 tgatgttgaaacaaagaaaaaaattgatgaatggttagcttcaaagaaaaaacaataaaa 1661

                           
Query: 1662 tcattatttccatcc 1676
            |||||||||||||||
Sbjct: 1662 tcattatttccatcc 1676


 Score = 75.8 bits (38), Expect = 1e-13
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                
Query: 24 ctattaagtaaacacacaaataaaaacatattacatca 61
          ||||||||||||||||||||||||||||||||||||||
Sbjct: 24 ctattaagtaaacacacaaataaaaacatattacatca 61


 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 89  caactttaattaaatagtaacaat 112
           ||||||||||||||||||||||||
Sbjct: 89  caactttaattaaatagtaacaat 112


>Contig-U14635-1 (Contig-U14635-1Q) /CSM_Contig/Contig-U14635-1Q.Seq.d
          Length = 352

 Score = 42.1 bits (21), Expect = 0.002
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 348 accattaccattaccattacc 368
           |||||||||||||||||||||
Sbjct: 292 accattaccattaccattacc 272


 Score = 36.2 bits (18), Expect = 0.12
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 348 accattaccattaccatt 365
           ||||||||||||||||||
Sbjct: 286 accattaccattaccatt 269


 Score = 32.2 bits (16), Expect = 1.9
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 353 taccattaccattacc 368
           ||||||||||||||||
Sbjct: 293 taccattaccattacc 278


 Score = 30.2 bits (15), Expect = 7.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                              
Query: 350 cattaccattaccattacc 368
           ||||||||||||| |||||
Sbjct: 260 cattaccattaccgttacc 242


>Contig-U12474-1 (Contig-U12474-1Q) /CSM_Contig/Contig-U12474-1Q.Seq.d
          Length = 1117

 Score = 42.1 bits (21), Expect = 0.002
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 347 caccattaccattaccattac 367
           |||||||||||||||||||||
Sbjct: 452 caccattaccattaccattac 432


 Score = 32.2 bits (16), Expect = 1.9
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                               
Query: 348 accattaccattaccattac 367
           |||||||||||||| |||||
Sbjct: 445 accattaccattactattac 426


 Score = 30.2 bits (15), Expect = 7.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 354 accattaccattacc 368
           |||||||||||||||
Sbjct: 451 accattaccattacc 437


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 24,638
Number of Sequences: 6905
Number of extensions: 24638
Number of successful extensions: 2905
Number of sequences better than 10.0: 327
length of query: 1744
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1728
effective length of database: 5,564,391
effective search space: 9615267648
effective search space used: 9615267648
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U11167-1 (Contig-U11167-1Q) /CSM_Contig/Contig-U11167-1Q.Seq.d
         (1744 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AF044255) Dictyostelium discoideum NOSA (nosA) mRNA, comple...  1556   0.0    1
(BJ324135) Dictyostelium discoideum cDNA clone:dda5a03, 5' e...  1267   0.0    1
(BJ361859) Dictyostelium discoideum cDNA clone:ddc19h06, 5' ...  1217   0.0    1
(BJ360625) Dictyostelium discoideum cDNA clone:ddc7d05, 5' e...  1211   0.0    1
(BJ379200) Dictyostelium discoideum cDNA clone:ddc34h02, 3' ...  1183   0.0    1
(BJ349684) Dictyostelium discoideum cDNA clone:dda37g08, 3' ...  1112   0.0    1
(BJ408479) Dictyostelium discoideum cDNA clone:dds45p20, 3' ...  1108   0.0    1
(BJ348343) Dictyostelium discoideum cDNA clone:dda32n22, 3' ...  1080   0.0    1
(BJ354929) Dictyostelium discoideum cDNA clone:dda55o01, 3' ...  1078   0.0    2
(BJ442689) Dictyostelium discoideum cDNA clone:ddv50n14, 3' ...  1039   0.0    1
(BJ400648) Dictyostelium discoideum cDNA clone:dds14l05, 3' ...  1025   0.0    3
(BJ357326) Dictyostelium discoideum cDNA clone:dda63n06, 3' ...   959   0.0    2
(BJ353677) Dictyostelium discoideum cDNA clone:dda51f06, 3' ...   850   0.0    2
(BJ412176) Dictyostelium discoideum cDNA clone:ddv7a10, 5' e...   690   0.0    3
(BJ445822) Dictyostelium discoideum cDNA clone:ddv60b23, 3' ...   981   0.0    1
(BJ384788) Dictyostelium discoideum cDNA clone:ddc50p18, 3' ...   948   0.0    1
(C90451) Dictyostelium discoideum slug cDNA, clone SSI546.        837   0.0    2
(BJ439911) Dictyostelium discoideum cDNA clone:ddv42d04, 3' ...   874   0.0    1
(BJ349206) Dictyostelium discoideum cDNA clone:dda35b19, 3' ...   428   e-144  2
(BJ391673) Dictyostelium discoideum cDNA clone:dds24d22, 5' ...    76   1e-17  2
(BJ334312) Dictyostelium discoideum cDNA clone:dda45j24, 5' ...    76   1e-17  2
(BJ426941) Dictyostelium discoideum cDNA clone:ddv60b23, 5' ...    74   4e-17  2
(BJ390898) Dictyostelium discoideum cDNA clone:dds14l05, 5' ...    74   4e-17  2
(BJ335306) Dictyostelium discoideum cDNA clone:dda49p14, 5' ...    74   4e-17  2
(BJ397344) Dictyostelium discoideum cDNA clone:dds45p20, 5' ...    74   4e-17  2
(BJ361248) Dictyostelium discoideum cDNA clone:ddc16m10, 5' ...    74   4e-17  2
(BJ334774) Dictyostelium discoideum cDNA clone:dda47b23, 5' ...    74   4e-17  2
(BJ331856) Dictyostelium discoideum cDNA clone:dda37g08, 5' ...    74   4e-17  2
(BJ333139) Dictyostelium discoideum cDNA clone:dda41g16, 5' ...    72   2e-16  2
(BJ330840) Dictyostelium discoideum cDNA clone:dda32n22, 5' ...    74   2e-15  2
(BJ423875) Dictyostelium discoideum cDNA clone:ddv50n14, 5' ...    72   4e-14  2
(BJ421272) Dictyostelium discoideum cDNA clone:ddv42d04, 5' ...    60   5e-13  2
(BJ333778) Dictyostelium discoideum cDNA clone:dda44b01, 5' ...    58   2e-12  2
(BJ369479) Dictyostelium discoideum cDNA clone:ddc50p18, 5' ...    54   3e-11  2
(BJ331524) Dictyostelium discoideum cDNA clone:dda35b19, 5' ...    70   1e-10  2
(AU269224) Dictyostelium discoideum vegetative cDNA clone:VS...    48   2e-09  2
(EH633205) EST4312 LK04 Laupala kohalensis cDNA clone 106102...    60   4e-07  2
(EH633180) EST4287 LK04 Laupala kohalensis cDNA clone 106102...    60   4e-07  2
(AJ761793) Gerbera hybrid cv. 'Terra Regina' EST, clone G000...    40   0.016  2
(AY496805) Lycaeides argyrognomon cytochrome oxidase subunit...    34   0.040  4
(EH740644) CNMS13902.b1_K19.ab1 CNM(LMS) spotted knapweed Ce...    38   0.058  2
(AC177272) Strongylocentrotus purpuratus clone R3-44A7, WORK...    52   0.073  1
(AE017308) Mycoplasma mobile 163K complete genome.                 34   0.13   21
(AY496806) Lycaeides idas anna cytochrome oxidase subunit I ...    34   0.14   4
(CU469464) Candidatus Phytoplasma mali strain AT complete ch...    32   0.17   22
(BX469912) Zebrafish DNA sequence from clone CH211-156L18 in...    38   0.25   10
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    32   0.26   17
(AL117193) Caenorhabditis elegans YAC Y105C5A.                     50   0.29   1
(EL648926) AGENCOURT_98696732 NCI_CGAP_ZEmb3 Danio rerio cDN...    50   0.29   1
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047...    36   0.30   13
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124...    32   0.38   13
(DU409069) 1098486029341 CHORI-243 Ovis aries genomic clone ...    44   0.40   2
(CP000963) Clostridium botulinum A3 str. Loch Maree plasmid ...    42   0.44   13
(EH293820) Q1_Reed_18d_tembryo_06_G05_071.F 14d_emb Meleagri...    34   0.57   3
(EJ144086) 1092343677644 Global-Ocean-Sampling_GS-27-01-01-1...    34   0.78   4
(AM443067) Vitis vinifera contig VV78X068770.5, whole genome...    42   0.89   4
(EL816544) CBWN2491.b1 NICHD_XGC_tropTe1 Xenopus (Silurana) ...    30   0.91   4
(AM431768) Vitis vinifera contig VV78X252278.1, whole genome...    42   0.93   2
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ...    36   1.0    19
(CR925824) Zebrafish DNA sequence from clone DKEYP-66E4 in l...    48   1.1    1
(BV306655) S236P6421FD11.T0 AlaskanMalamute Canis familiaris...    48   1.1    1
(CU468703) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    48   1.1    1
(ER970572) AF__Bc0041C11f AF__Bc Aquilegia formosa genomic, ...    48   1.1    1
(DE980533) Macropus eugenii DNA, BAC clone: MEB1-189B09_F, 5...    48   1.1    1
(FD413179) 1106515120213 Cryptosporidium muris (strain RN66)...    48   1.1    1
(FD388355) 1106121092404 Cryptosporidium muris (strain RN66)...    48   1.1    1
(BX005085) Zebrafish DNA sequence from clone CH211-225F23 in...    36   1.2    7
(AC178731) Strongylocentrotus purpuratus clone R3-3002M6, WO...    42   1.5    5
(AL646091) Mouse DNA sequence from clone RP23-101K9 on chrom...    36   1.6    6
(FF684677) RH_MEa0014aE12 RH_MEa blackberry emerging leaf Ru...    40   1.7    2
(FH720956) CHO_OF5063xh05f1.ab1 CHO_OF5 Nicotiana tabacum ge...    38   1.8    2
(BZ683516) PUBJP04TD ZM_0.6_1.0_KB Zea mays genomic clone ZM...    44   1.8    2
(EX322544) GQ02819.B7_F01 GQ028 - Cambium / phloem scrapping...    42   2.0    2
(AY496720) Agrodiaetus baytopi cytochrome oxidase subunit I ...    34   2.0    3
(AC160694) Bos taurus clone CH240-91O17, WORKING DRAFT SEQUE...    44   2.0    7
(AC189213) Brassica rapa subsp. pekinensis clone KBrB009B09,...    44   2.1    5
(EH284357) Q1_Reed_um_mg_cDNA1_04_36D05.F 14d_emb Meleagris ...    34   2.3    3
(EF641896) Meligethes thalassophilus haplotype ITA2 control ...    40   2.3    2
(EF104620) Agrodiaetus pulcher voucher VL04A005 cytochrome o...    34   2.4    3
(AE014838) Plasmodium falciparum 3D7 chromosome 11 section 3...    36   2.5    10
(AL603792) Mouse DNA sequence from clone RP23-328B4 on chrom...    36   2.6    7
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi...    36   2.8    20
(AC116960) Dictyostelium discoideum chromosome 2 map complem...    40   2.9    12
(EK234384) 1095460194227 Global-Ocean-Sampling_GS-31-01-01-1...    34   3.0    2
(AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2...    38   3.0    10
(AC188299) Macaca mulatta chromosome UNK clone CH250-87H12, ...    34   3.1    10
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041...    38   3.4    15
(EX146977) cr28_P02 Saffron (Crocus sativus) mature stigma l...    44   3.5    2
(EX148295) cr36_J10 Saffron (Crocus sativus) mature stigma l...    44   3.5    2
(EH283426) Q1_Reed_um_Mg_cDNA1_08_33A05.F 14d_emb Meleagris ...    34   3.5    3
(EK153841) 1095456065415 Global-Ocean-Sampling_GS-31-01-01-1...    38   3.8    3
(DQ082786) Delias iltis voucher MFB-00-P108 cytochrome oxida...    42   3.9    2
(X85538) Gallus gallus microsatellite DNA GgaMU143.                46   4.5    1
(CU138575) Zebrafish DNA sequence from clone CH211-159E5.          46   4.5    1
(AC189011) Gallus gallus BAC clone CH261-73O8 from chromosom...    46   4.5    1
(AC188947) Gallus gallus BAC clone CH261-69F24 from chromoso...    46   4.5    1
(BC130015) Mus musculus chitinase 3-like 4, mRNA (cDNA clone...    46   4.5    1
(AY065557) Mus musculus putative secretory protein precursor...    46   4.5    1
(AY049765) Mus musculus secreted protein precursor Ym2 mRNA,...    46   4.5    1
(AM481015) Vitis vinifera contig VV78X047372.5, whole genome...    46   4.5    1

>(AF044255) Dictyostelium discoideum NOSA (nosA) mRNA, complete cds.
          Length = 3451

 Score = 1556 bits (785), Expect = 0.0
 Identities = 788/789 (99%)
 Strand = Plus / Plus


Query: 153  taaatggcaaaatacaccacaaggtagattatttgaaggtcaattagatttattaacaaa 212
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1945 taaatggcaaaatacaccacaaggtagattatttgaaggtcaattagatttattaacaaa 2004


Query: 213  gaaagaggatatgttaaaaggtattacatacactattgatgcacaattatttgaaccaac 272
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2005 gaaagaggatatgttaaaaggtattacatacactattgatgcacaattatttgaaccaac 2064


Query: 273  atttttacaaaaaactgcatcattcttattatttgcaacaaattggatattaaaagtaat 332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2065 atttttacaaaaaactgcatcattcttattatttgcaacaaattggatattaaaagtaat 2124


Query: 333  caatccaaagaatacaccattaccattaccattacctgctccaccacaatttgcagcttt 392
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2125 caatccaaagaatacaccattaccattaccattacctgctccaccacaatttgcagcttt 2184


Query: 393  accagagttttgtattgaggatattgttgatttctttacttttgttataactaattttag 452
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2185 accagagttttgtattgaggatattgttgatttctttacttttgttataactaattttag 2244


Query: 453  tcaagttttacaatatattaaattagaacaattaatgaaattttttattacaattttagc 512
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2245 tcaagttttacaatatattaaattagaacaattaatgaaattttttattacaattttagc 2304


Query: 513  aacaccagaatatgttaagaatccatatttgaaagcaaagattattgaaattatttcaca 572
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2305 aacaccagaatatgttaagaatccatatttgaaagcaaagattattgaaattatttcaca 2364


Query: 573  atttgtaccaagtaaatattcaaaaggtaatccaatattgttagagtgtaatcaagatgt 632
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2365 atttgtaccaagtaaatattcaaaaggtaatccaatattgttagagtgtaatcaagatgt 2424


Query: 633  aaaggatcatatggtattggcattaatgagattctatgtggacattgagttcactggtgg 692
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2425 aaaggatcatatggtattagcattaatgagattctatgtggacattgagttcactggtgg 2484


Query: 693  tcataatcaattttatgaaaagttttcatatcgtcattatagtagtttaattcttaaata 752
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2485 tcataatcaattttatgaaaagttttcatatcgtcattatagtagtttaattcttaaata 2544


Query: 753  tctttggtcaattccagactttagaaagaaattcactgaaactccaaaggatccaatatt 812
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2545 tctttggtcaattccagactttagaaagaaattcactgaaactccaaaggatccaatatt 2604


Query: 813  tattaaattcattaatatgttaatcaatgattcaatttatgttttagatgaagcacttgc 872
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2605 tattaaattcattaatatgttaatcaatgattcaatttatgttttagatgaagcacttgc 2664


Query: 873  taaattagctaaaattaaagaaaatcaaactttatttgacgatccaaattgggataaaga 932
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2665 taaattagctaaaattaaagaaaatcaaactttatttgacgatccaaattgggataaaga 2724


Query: 933  tttaacacc 941
            |||||||||
Sbjct: 2725 tttaacacc 2733

 Score = 1209 bits (610), Expect(2) = 0.0
 Identities = 613/614 (99%)
 Strand = Plus / Plus


Query: 1004 taagtttagcaaatagtaatattgatatgatgttatttttatcaagtgataaaaccatta 1063
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2796 taagtttagcaaatagtaatattgatatgatgttatttttatcaagtgataaaaccatta 2855


Query: 1064 ttagtggatttatgagaccagaattaattgatagaatttcagcaatgatgaattatttct 1123
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2856 ttagtggatttatgagaccagaattaattgatagaatttcagcaatgatgaattatttct 2915


Query: 1124 tagcattaattgttggtccaaaatgtacaaatctcaaagtaagagaaccagagaaatatc 1183
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2916 tagcattaattgttggtccaaaatgtacaaatctcaaagtaagagaaccagagaaatatc 2975


Query: 1184 atttcaatccaaaggtattattgaatcaattaacagagatctatgtaaactttggtagag 1243
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2976 atttcaatccaaaggtattattgaatcaattaacagagatctatgtaaactttggtagag 3035


Query: 1244 atccaagattcttacaatcagtggttagagatggtagatccttcaagaattcattgttcc 1303
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3036 atccaagattcttacaatcagtggttagagatggtagatccttcaagaattcattgttcc 3095


Query: 1304 aaacttgtgaaaagattcttcaaagagaaaggttaaagaatgaccatgaattggatgaat 1363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3096 aaacttgtgaaaagattcttcaaagagaaaggttaaagaatgaccatgaattggatgaat 3155


Query: 1364 tctcaaaattggtcattaaacttgaacaagtcgccaaagaggaagaacaagctgaagaag 1423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3156 tctcaaaattggtcattaaacttgaacaagtcgccaaagaggaagaacaagctgaagaag 3215


Query: 1424 atcttggtgatattccagatgaattctgtgatccaatcttatcaactcttatgactgatc 1483
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3216 atcttggtgatattccagatgaattctgtgatccaatcttatcaactcttatgactgatc 3275


Query: 1484 ctgtcattttaccatcaagtaaaaccgttatcgatagacaaactatccttagacatttac 1543
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3276 ctgtcattttaccatcaagtaaaaccgttatcgatagacaaactatccttagacatttac 3335


Query: 1544 ttagtgatcaaactgatcctttcaatagatctcatttaacccctgaaatgttaattgatg 1603
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3336 ttagtgatcaaactgatcctttcaatagatctcatttaacacctgaaatgttaattgatg 3395


Query: 1604 atgttgaaacaaag 1617
            ||||||||||||||
Sbjct: 3396 atgttgaaacaaag 3409

 Score = 69.9 bits (35), Expect(2) = 0.0
 Identities = 35/35 (100%)
 Strand = Plus / Plus


Query: 1625 ttgatgaatggttagcttcaaagaaaaaacaataa 1659
            |||||||||||||||||||||||||||||||||||
Sbjct: 3417 ttgatgaatggttagcttcaaagaaaaaacaataa 3451

 Score = 73.8 bits (37), Expect(2) = 4e-17
 Identities = 37/37 (100%)
 Strand = Plus / Plus


Query: 25 tattaagtaaacacacaaataaaaacatattacatca 61
          |||||||||||||||||||||||||||||||||||||
Sbjct: 49 tattaagtaaacacacaaataaaaacatattacatca 85

 Score = 48.1 bits (24), Expect(2) = 4e-17
 Identities = 24/24 (100%)
 Strand = Plus / Plus


Query: 89  caactttaattaaatagtaacaat 112
           ||||||||||||||||||||||||
Sbjct: 113 caactttaattaaatagtaacaat 136

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,001,989,200
Number of extensions: 123303581
Number of successful extensions: 10878417
Number of sequences better than 10.0: 161
Length of query: 1744
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1720
Effective length of database: 97,308,875,965
Effective search space: 167371266659800
Effective search space used: 167371266659800
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U11167-1 (Contig-U11167-1Q) /CSM_Contig/Contig-U11167-1Q.Seq.d
         (1744 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF044255_1(AF044255|pid:none) Dictyostelium discoideum NOSA (nos...   941   0.0
DQ683066_1(DQ683066|pid:none) Synthetic construct UFD2 (UFD2) ge...   317   9e-85
BC098986_1(BC098986|pid:none) Xenopus laevis hypothetical protei...   290   9e-77
AM920437_1853(AM920437|pid:none) Penicillium chrysogenum Wiscons...   290   1e-76
(A5PKG6) RecName: Full=Ubiquitin conjugation factor E4 A;  &BC14...   286   2e-75
BT059275_1(BT059275|pid:none) Salmo salar clone ssal-rgf-538-035...   285   3e-75
BC099985_1(BC099985|pid:none) Danio rerio ubiquitination factor ...   285   5e-75
AJ720127_1(AJ720127|pid:none) Gallus gallus mRNA for hypothetica...   283   1e-74
CU638743_488(CU638743|pid:none) Podospora anserina genomic DNA c...   281   4e-74
AK122345_1(AK122345|pid:none) Mus musculus mRNA for mKIAA0684 pr...   281   7e-74
AK029914_1(AK029914|pid:none) Mus musculus adult male testis cDN...   281   7e-74
CR858257_1(CR858257|pid:none) Pongo abelii mRNA; cDNA DKFZp469M2...   280   9e-74
D50916_1(D50916|pid:none) Homo sapiens mRNA for KIAA0126 gene, p...   280   9e-74
AB383757_1(AB383757|pid:none) Synthetic construct DNA, clone: pF...   280   9e-74
(Q5R9G3) RecName: Full=Ubiquitin conjugation factor E4 A;             280   9e-74
AK302328_1(AK302328|pid:none) Homo sapiens cDNA FLJ51394 complet...   280   9e-74
EF445042_1(EF445042|pid:none) Homo sapiens ubiquitin conjugation...   280   9e-74
CR859425_1(CR859425|pid:none) Pongo abelii mRNA; cDNA DKFZp469M2...   279   2e-73
AK292444_1(AK292444|pid:none) Homo sapiens cDNA FLJ78424 complet...   278   6e-73
AB028839_1(AB028839|pid:none) Homo sapiens HDNB1(homzygously del...   278   6e-73
AB014584_1(AB014584|pid:none) Homo sapiens mRNA for KIAA0684 pro...   278   6e-73
(O95155) RecName: Full=Ubiquitin conjugation factor E4 B; AltNam...   278   6e-73
AL807372_10(AL807372|pid:none) Neurospora crassa DNA linkage gro...   277   8e-73
AY325198_1(AY325198|pid:none) Rattus norvegicus Ab2-232 mRNA, co...   276   2e-72
AK304484_1(AK304484|pid:none) Homo sapiens cDNA FLJ50370 complet...   276   2e-72
(Q6P7A2) RecName: Full=Ubiquitin conjugation factor E4 A;  &BC06...   273   1e-71
CP000502_27(CP000502|pid:none) Pichia stipitis CBS 6054 chromoso...   271   7e-71
AF059906_1(AF059906|pid:none) Schizosaccharomyces pombe ubiquiti...   270   2e-70
AE016817_496(AE016817|pid:none) Ashbya gossypii (= Eremothecium ...   269   2e-70
AK296369_1(AK296369|pid:none) Homo sapiens cDNA FLJ61095 partial...   262   3e-68
U22154_1(U22154|pid:none) Saccharomyces cerevisiae ubiquitin fus...   240   1e-61
AK172893_1(AK172893|pid:none) Mus musculus mRNA for mKIAA0126 pr...   238   5e-61
(P54860) RecName: Full=Ubiquitin conjugation factor E4; AltName:...   238   7e-61
BT072747_1(BT072747|pid:none) Salmo salar clone ssal-rgf-539-009...   205   5e-51
BC068936_1(BC068936|pid:none) Xenopus laevis hypothetical protei...   200   2e-49
Z47812_9(Z47812|pid:none) Caenorhabditis elegans Cosmid T05H10, ...   196   2e-48
(Q09349) RecName: Full=Probable ubiquitin conjugation factor E4;...   196   2e-48
Z47812_7(Z47812|pid:none) Caenorhabditis elegans Cosmid T05H10, ...   196   2e-48
CP001326_729(CP001326|pid:none) Micromonas sp. RCC299 chromosome...   173   2e-41
BC006649_1(BC006649|pid:none) Mus musculus ubiquitination factor...   168   7e-40
AK037131_1(AK037131|pid:none) Mus musculus adult female vagina c...   163   2e-38
AF091093_1(AF091093|pid:none) Homo sapiens clone 686 unknown mRN...   145   5e-33
T00358(T00358)hypothetical protein KIAA0684 - human (fragment)        134   1e-29
CR940347_420(CR940347|pid:none) Theileria annulata strain Ankara...   132   5e-29
AL844507_256(AL844507|pid:none) Plasmodium falciparum 3D7 chromo...   123   2e-26
CP001327_453(CP001327|pid:none) Micromonas sp. RCC299 chromosome...    83   3e-14
AB032715_1(AB032715|pid:none) Schizosaccharomyces pombe mRNA for...    83   3e-14
FN357358_7(FN357358|pid:none) Schistosoma mansoni genome sequenc...    81   1e-13
AM502248_138(AM502248|pid:none) Leishmania infantum chromosome 30.     61   1e-07
CR954201_271(CR954201|pid:none) Ostreococcus tauri strain OTTH05...    48   0.001
AY274341_1(AY274341|pid:none) Drosophila simulans strain DSR iso...    48   0.001
AY274339_1(AY274339|pid:none) Drosophila yakuba strain 0261.0 Hs...    44   0.019
AY274342_1(AY274342|pid:none) Drosophila melanogaster strain CAM...    44   0.019
BT051839_1(BT051839|pid:none) Medicago truncatula clone MTYF5_F6...    44   0.024
BC101912_1(BC101912|pid:none) Rattus norvegicus U-box domain con...    43   0.032
(Q925F4) RecName: Full=RING finger protein 37; AltName: Full=Ubi...    43   0.032
BC025068_1(BC025068|pid:none) Mus musculus U box domain containi...    43   0.032
AF360997_1(AF360997|pid:none) Mus musculus UbcM4-interacting pro...    43   0.032
(Q9SRS9) RecName: Full=E3 ubiquitin-protein ligase CHIP;        ...    43   0.032
CU638744_712(CU638744|pid:none) Podospora anserina genomic DNA c...    42   0.070
AM445529_1(AM445529|pid:none) Vitis vinifera contig VV78X008531....    42   0.070
BC114651_1(BC114651|pid:none) Bos taurus U-box domain containing...    42   0.070
(O94941) RecName: Full=RING finger protein 37; AltName: Full=Ubi...    42   0.092
FJ185172_2(FJ185172|pid:none) Callorhinchus milii prosapip1 (pro...    42   0.092
AK022444_1(AK022444|pid:none) Homo sapiens cDNA FLJ12382 fis, cl...    42   0.092
AB020667_1(AB020667|pid:none) Homo sapiens mRNA for KIAA0860 pro...    42   0.092
BX908808_4(BX908808|pid:none) Neurospora crassa DNA linkage grou...    42   0.092
AK222570_1(AK222570|pid:none) Homo sapiens mRNA for ubiquitin co...    41   0.12
AY902351_1(AY902351|pid:none) Mus musculus strain CAST/EiJ ubiqu...    40   0.27
AY223080_1(AY223080|pid:none) Schistosoma japonicum SJCHGC01343 ...    40   0.27
T25874(T25874)hypothetical protein T09B4.10 - Caenorhabditis ele...    40   0.35
BT061287_1(BT061287|pid:none) Zea mays full-length cDNA clone ZM...    40   0.35
AP008214_89(AP008214|pid:none) Oryza sativa (japonica cultivar-g...    40   0.35
DQ440157_1(DQ440157|pid:none) Aedes aegypti clone AET-11011 ubiq...    39   0.60
EU284132_1(EU284132|pid:none) Latimeria menadoensis U-box domain...    39   0.60
AK243317_1(AK243317|pid:none) Oryza sativa Japonica Group cDNA, ...    39   0.60
CP001102_1327(CP001102|pid:none) Candidatus Amoebophilus asiatic...    39   0.60
FN392319_890(FN392319|pid:none) Pichia pastoris GS115 chromosome...    39   0.78
AP008211_34(AP008211|pid:none) Oryza sativa (japonica cultivar-g...    38   1.3
BC121471_1(BC121471|pid:none) Xenopus tropicalis hypothetical pr...    37   1.7
CP000817_301(CP000817|pid:none) Lysinibacillus sphaericus C3-41,...    37   1.7
AP005391_14(AP005391|pid:none) Oryza sativa Japonica Group genom...    37   3.0
EU955511_1(EU955511|pid:none) Zea mays clone 1535124 ubiquitin-p...    37   3.0
FM992690_701(FM992690|pid:none) Candida dubliniensis CD36 chromo...    37   3.0
X91753_1(X91753|pid:none) M.musculus mRNA for transcription fact...    36   3.9
AB173426_1(AB173426|pid:none) Macaca fascicularis brain cDNA clo...    36   3.9
AP007159_475(AP007159|pid:none) Aspergillus oryzae RIB40 genomic...    36   3.9
CP000061_243(CP000061|pid:none) Aster yellows witches'-broom phy...    36   3.9
AP004837_14(AP004837|pid:none) Oryza sativa Japonica Group genom...    36   3.9
X52079_1(X52079|pid:none) H.sapiens transcription factor (ITF-2)...    36   3.9
AE009951_1726(AE009951|pid:none) Fusobacterium nucleatum subsp. ...    36   3.9
(P15884) RecName: Full=Transcription factor 4; AltName: Full=Imm...    36   3.9
I52648(I52648) class A helix-loop-helix transcription factor ME2...    36   3.9
AK081012_1(AK081012|pid:none) Mus musculus 10 days neonate cereb...    36   3.9
AP008208_1287(AP008208|pid:none) Oryza sativa (japonica cultivar...    36   3.9
BC103178_1(BC103178|pid:none) Bos taurus transcription factor 7-...    36   5.0
M74718_1(M74718|pid:none) Human SEF2-1A protein (SEF2-1A) mRNA, ...    36   5.0
AK095041_1(AK095041|pid:none) Homo sapiens cDNA FLJ37722 fis, cl...    36   5.0
AB447354_1(AB447354|pid:none) Bos taurus TCF4 mRNA for transcrip...    36   5.0
AK300038_1(AK300038|pid:none) Homo sapiens cDNA FLJ54545 complet...    36   5.0
AK133885_1(AK133885|pid:none) Mus musculus 8 days embryo whole b...    36   5.0
AY740029_1(AY740029|pid:none) Saccharomyces kudriavzevii IFO 180...    36   5.0
(Q62655) RecName: Full=Transcription factor 4; AltName: Full=Imm...    36   5.0
A53689(A53689) transcription factor ITF2 - rat (fragment)  &U092...    36   5.0
CP001252_2012(CP001252|pid:none) Shewanella baltica OS223, compl...    36   5.0
CP001329_1(CP001329|pid:none) Micromonas sp. RCC299 chromosome 9...    36   5.0
CP000563_2019(CP000563|pid:none) Shewanella baltica OS155, compl...    36   5.0
(Q9STL8) RecName: Full=Probable Ufm1-specific protease;         ...    35   6.6
AL049659_15(AL049659|pid:none) Arabidopsis thaliana DNA chromoso...    35   6.6
FB802585_1(FB802585|pid:none) Sequence 21858 from Patent WO20080...    35   6.6
(Q9ZV31) RecName: Full=U-box domain-containing protein 12;      ...    35   6.6
AY035038_1(AY035038|pid:none) Arabidopsis thaliana unknown prote...    35   6.6
AY058588_1(AY058588|pid:none) Drosophila melanogaster LD28173 fu...    35   8.6
AM920437_2145(AM920437|pid:none) Penicillium chrysogenum Wiscons...    35   8.6
CP001327_698(CP001327|pid:none) Micromonas sp. RCC299 chromosome...    35   8.6
BT001355_1(BT001355|pid:none) Drosophila melanogaster AT27758 fu...    35   8.6
AM429121_2(AM429121|pid:none) Vitis vinifera contig VV78X041468....    35   8.6
AL445563_58(AL445563|pid:none) Mycoplasma pulmonis (strain UAB C...    35   8.6
AP002842_14(AP002842|pid:none) Oryza sativa Japonica Group genom...    35   8.6
AM412317_1054(AM412317|pid:none) Clostridium botulinum A str. AT...    35   8.6
AK067611_1(AK067611|pid:none) Oryza sativa Japonica Group cDNA c...    35   8.6
EF091878_1(EF091878|pid:none) Solanum tuberosum ACRE 276-like pr...    35   8.6

>AF044255_1(AF044255|pid:none) Dictyostelium discoideum NOSA (nosA)
            mRNA, complete cds.  &T14576(T14576)
          Length = 1089

 Score =  941 bits (2432), Expect = 0.0
 Identities = 473/501 (94%), Positives = 473/501 (94%)
 Frame = +1

Query: 154  KWQNTPQGRLFEGQLDLLTKKEDMLKGITYTIDAQLFEPTFLQKTASFLLFATNWILKVI 333
            KWQNTPQGRLFEGQLDLLTKKEDMLKGITYTIDAQLFEPTFLQKTASFLLFATNWILKVI
Sbjct: 589  KWQNTPQGRLFEGQLDLLTKKEDMLKGITYTIDAQLFEPTFLQKTASFLLFATNWILKVI 648

Query: 334  NPKNTXXXXXXXXXXXXXXXXEFCIEDIVDFFTFVITNFSQVLQYIKLEQLMKFFITILA 513
            NPKNT                EFCIEDIVDFFTFVITNFSQVLQYIKLEQLMKFFITILA
Sbjct: 649  NPKNTPLPLPLPAPPQFAALPEFCIEDIVDFFTFVITNFSQVLQYIKLEQLMKFFITILA 708

Query: 514  TPEYVKNPYLKAKIIEIISQFVPSKYSKGNPILLECNQDVKDHMVLALMRFYVDIEFTGG 693
            TPEYVKNPYLKAKIIEIISQFVPSKYSKGNPILLECNQDVKDHMVLALMRFYVDIEFTGG
Sbjct: 709  TPEYVKNPYLKAKIIEIISQFVPSKYSKGNPILLECNQDVKDHMVLALMRFYVDIEFTGG 768

Query: 694  HNQFYEKFSYRHYSSLILKYLWSIPDFRKKFTETPKDPIFIKFINMLINDSIYVLDEALA 873
            HNQFYEKFSYRHYSSLILKYLWSIPDFRKKFTETPKDPIFIKFINMLINDSIYVLDEALA
Sbjct: 769  HNQFYEKFSYRHYSSLILKYLWSIPDFRKKFTETPKDPIFIKFINMLINDSIYVLDEALA 828

Query: 874  KLAKIKENQTLFDDPNWDKDLTPEQRKEKIEQNDLNERICKSNLSLANSNIDMMLFLSSD 1053
            KLAKIKENQTLFDDPNWDKDLTPEQRKEKIEQNDLNERICKSNLSLANSNIDMMLFLSSD
Sbjct: 829  KLAKIKENQTLFDDPNWDKDLTPEQRKEKIEQNDLNERICKSNLSLANSNIDMMLFLSSD 888

Query: 1054 KTIISGFMRPELIDRISAMMNYFLALIVGPKCTNLKVREPEKYHFNPKVLLNQLTEIYVN 1233
            KTIISGFMRPELIDRISAMMNYFLALIVGPKCTNLKVREPEKYHFNPKVLLNQLTEIYVN
Sbjct: 889  KTIISGFMRPELIDRISAMMNYFLALIVGPKCTNLKVREPEKYHFNPKVLLNQLTEIYVN 948

Query: 1234 FGRDPRFLQSVVRDGRSFKNSLFQTCEKILQRERLKNDHELDEFSKLVIKLXXXXXXXXX 1413
            FGRDPRFLQSVVRDGRSFKNSLFQTCEKILQRERLKNDHELDEFSKLVIKL
Sbjct: 949  FGRDPRFLQSVVRDGRSFKNSLFQTCEKILQRERLKNDHELDEFSKLVIKLEQVAKEEEQ 1008

Query: 1414 XXXDLGDIPDEFCDPILSTLMTDPVILPSSKTVIDRQTILRHLLSDQTDPFNRSHLTPEM 1593
               DLGDIPDEFCDPILSTLMTDPVILPSSKTVIDRQTILRHLLSDQTDPFNRSHLTPEM
Sbjct: 1009 AEEDLGDIPDEFCDPILSTLMTDPVILPSSKTVIDRQTILRHLLSDQTDPFNRSHLTPEM 1068

Query: 1594 LIDDVETKKKIDEWLASKKKQ 1656
            LIDDVETKKKIDEWLASKKKQ
Sbjct: 1069 LIDDVETKKKIDEWLASKKKQ 1089

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,114,286,290
Number of extensions: 36501649
Number of successful extensions: 101794
Number of sequences better than 10.0: 122
Number of HSP's gapped: 101511
Number of HSP's successfully gapped: 122
Length of query: 581
Length of database: 1,040,966,779
Length adjustment: 134
Effective length of query: 447
Effective length of database: 611,592,589
Effective search space: 273381887283
Effective search space used: 273381887283
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.43  gvh: 0.38  alm: 0.37  top: 0.53  tms: 0.00  mit: 0.33  mip: 0.05
 nuc: 0.12  erl: 0.00  erm: 0.60  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: nuclear
	 24.0 %: cytoplasmic
	 20.0 %: mitochondrial
	  4.0 %: peroxisomal

>> prediction for Contig-U11167-1 is nuc