| Homology vs DNA |
 Query= Contig-U11162-1 (Contig-U11162-1Q) /CSM_Contig/Contig-U11162-1Q.Seq.d
(1342 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ348102) Dictyostelium discoideum cDNA clone:dda32n06, 3' ... 1515 0.0 1
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 1481 0.0 2
(BJ330624) Dictyostelium discoideum cDNA clone:dda32n06, 5' ... 238 4e-58 1
(EK505743) 1095506310401 Global-Ocean-Sampling_GS-32-01-01-1... 50 3e-05 3
(EK177858) 1095458106150 Global-Ocean-Sampling_GS-31-01-01-1... 50 6e-05 2
(EF089389) Uncultured marine bacterium HOT0_02H05 genomic se... 40 8e-04 2
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 46 0.010 15
(EK320564) 1095462427625 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.020 2
(DU322552) 1098448213826 CHORI-243 Ovis aries genomic clone ... 52 0.056 1
(DU240262) 1098574176060 CHORI-243 Ovis aries genomic clone ... 52 0.056 1
(DU239489) 1098574171860 CHORI-243 Ovis aries genomic clone ... 52 0.056 1
(EJ867764) 1093018291049 Global-Ocean-Sampling_GS-30-02-01-1... 36 0.068 4
(EJ790066) 1093017372402 Global-Ocean-Sampling_GS-30-02-01-1... 36 0.070 4
(EK016294) 1092955235430 Global-Ocean-Sampling_GS-31-01-01-1... 40 0.072 2
(EK521242) 1095515520354 Global-Ocean-Sampling_GS-32-01-01-1... 50 0.082 2
(EJ989539) 1093023037470 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.19 2
(AC084502) Caenorhabditis briggsae cosmid G14F21, complete s... 50 0.22 1
(AM412317) Clostridium botulinum A str. ATCC 3502 complete g... 34 0.23 20
(EK515538) 1095515497765 Global-Ocean-Sampling_GS-32-01-01-1... 38 0.29 2
(EJ208031) 1092345108662 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.34 2
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 36 0.78 12
(BD428955) Method and nucleic acids for pharmacogenomic meth... 46 0.82 3
(AX348434) Sequence 129 from Patent WO0202806. 46 0.82 3
(AX346758) Sequence 1829 from Patent WO0200928. 46 0.82 3
(AC115972) Mus musculus chromosome 5, clone RP24-79A6, compl... 48 0.87 1
(AC199586) Rhesus Macaque BAC CH250-101H7 () complete seque... 48 0.87 1
(AC142563) Bos taurus clone RP42-462M18, WORKING DRAFT SEQUE... 48 0.87 1
(AC142562) Bos taurus clone RP42-371H23, WORKING DRAFT SEQUE... 48 0.87 1
(CU570872) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.87 1
(AC221916) Bos taurus clone CH240-378B8, WORKING DRAFT SEQUE... 48 0.87 1
(BH074042) RPCI-24-391G18.TJ RPCI-24 Mus musculus genomic cl... 48 0.87 1
(ER803685) PPTI417TR Solanum tuberosum RHPOTKEY BAC ends Sol... 48 0.87 1
(ER442898) 1092963819588 Global-Ocean-Sampling_GS-35-01-01-1... 48 0.87 1
(ER425232) 1092963744598 Global-Ocean-Sampling_GS-35-01-01-1... 48 0.87 1
(EJ950189) 1093018939866 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.87 1
(EJ066121) 1095458041008 Global-Ocean-Sampling_GS-26-01-01-1... 48 0.87 1
(CE616013) tigr-gss-dog-17000327628449 Dog Library Canis lup... 48 0.87 1
(DN740121) Pp1640 Phakopsora pachyrhizi germinating uredinio... 48 0.87 1
(FE694339) Pv017C_M13F_B05.ab1 Phaseolus vulgaris cv Early g... 48 0.87 1
(EK068808) 1092960161953 Global-Ocean-Sampling_GS-31-01-01-1... 44 0.96 2
(EK354002) 1095468342966 Global-Ocean-Sampling_GS-31-01-01-1... 44 1.1 2
(EK072623) 1092961004409 Global-Ocean-Sampling_GS-31-01-01-1... 44 1.2 2
(AM478011) Vitis vinifera contig VV78X225466.8, whole genome... 36 1.3 3
(AC186078) Canis familiaris chromosome 5, clone XX-98N3, com... 34 1.7 2
(AC186051) Canis Familiaris chromosome 5, clone XX-212F17, c... 34 1.7 2
(AM475851) Vitis vinifera contig VV78X193560.11, whole genom... 34 1.8 4
(AM480077) Vitis vinifera contig VV78X005448.11, whole genom... 38 2.0 3
(ER461764) 1092963898667 Global-Ocean-Sampling_GS-35-01-01-1... 34 2.1 4
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 36 2.5 17
(CT956003) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 2.8 5
(EJ700176) 1092956032597 Global-Ocean-Sampling_GS-30-02-01-1... 44 2.8 2
(AM482406) Vitis vinifera contig VV78X123948.6, whole genome... 40 2.9 3
(EK405926) 1095505002649 Global-Ocean-Sampling_GS-31-01-01-1... 38 2.9 2
(EK480677) 1095469515127 Global-Ocean-Sampling_GS-32-01-01-1... 34 2.9 3
(AZ682971) ENTIJ34TF Entamoeba histolytica Sheared DNA Entam... 36 2.9 3
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 34 3.0 15
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 36 3.1 20
(CT311711) Sus scrofa genomic clone CH242-11D15, genomic sur... 38 3.1 2
(EJ296409) 1095388042949 Global-Ocean-Sampling_GS-27-01-01-1... 40 3.1 2
(CU467736) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 3.3 8
(CT027682) Zebrafish DNA sequence from clone CH211-53M15 in ... 46 3.4 1
(BV556738) S222P61224RE2.T0 Karlien Pan troglodytes verus ST... 46 3.4 1
(AL450395) Mouse DNA sequence from clone RP23-145O4 on chrom... 46 3.4 1
(AC160936) Mus musculus BAC clone RP23-300E17 from chromosom... 46 3.4 1
(AC103353) Mus musculus chromosome 12, clone RP23-450G14, co... 46 3.4 1
(AM442751) Vitis vinifera contig VV79X000681.2, whole genome... 46 3.4 1
(AC037473) Homo sapiens chromosome 18, clone CTD-2130O13, co... 46 3.4 1
(AC026898) Homo sapiens chromosome 18, clone RP11-767C4, com... 46 3.4 1
(AC130145) Rattus norvegicus clone CH230-147G14, *** SEQUENC... 46 3.4 1
(AC127144) Rattus norvegicus clone CH230-167K14, *** SEQUENC... 46 3.4 1
(AC115774) Mus musculus clone RP23-122D18, LOW-PASS SEQUENCE... 46 3.4 1
(AC109008) Rattus norvegicus clone CH230-40H22, *** SEQUENCI... 46 3.4 1
(AC106406) Rattus norvegicus clone CH230-131L15, *** SEQUENC... 46 3.4 1
(AC098520) Rattus norvegicus clone CH230-68L8, *** SEQUENCIN... 46 3.4 1
(AP010005) Lotus japonicus genomic DNA, chromosome 1, clone:... 46 3.4 1
(AC225045) Tupaia belangeri clone CH275-252K8, WORKING DRAFT... 46 3.4 1
(AC196583) Macaca mulatta clone CH250-66M21, WORKING DRAFT S... 46 3.4 1
(BH419318) BOGSX30TR BOGS Brassica oleracea genomic clone BO... 46 3.4 1
(AZ923673) 4908.gf21n05.s1 Saccharomyces cariocanus UFRJ 507... 46 3.4 1
(AZ673146) ENTKO28TR Entamoeba histolytica Sheared DNA Entam... 46 3.4 1
(ER632846) 1093018519634 Global-Ocean-Sampling_GS-36-01-01-2... 46 3.4 1
(EK095689) 1092962034685 Global-Ocean-Sampling_GS-31-01-01-1... 46 3.4 1
(EK091376) 1092962003388 Global-Ocean-Sampling_GS-31-01-01-1... 46 3.4 1
(AM638293) Entamoeba dispar GSS, clone dispar51e08.q1k. 46 3.4 1
(EJ254360) 1095347006866 Global-Ocean-Sampling_GS-27-01-01-1... 46 3.4 1
(EJ065785) 1095458038873 Global-Ocean-Sampling_GS-26-01-01-1... 46 3.4 1
(DU501854) 1098538164791 CHORI-243 Ovis aries genomic clone ... 46 3.4 1
(CL637921) CH243-8L14.T7 CHORI-243 Ovis aries genomic clone ... 46 3.4 1
(EV100830) 0093153 Brassica napus Leaf library Brassica napu... 46 3.4 1
(EV099199) 0178879 Brassica napus Leaf library Brassica napu... 46 3.4 1
(ES973026) EX20LIB6_UP_071_G10_12MAY2004_068 Brassica napus ... 46 3.4 1
(ES972760) EX20LIB6_UP_062_H06_30APR2004_034 Brassica napus ... 46 3.4 1
(ES972297) EX20LIB6_UP_046_G09_08APR2004_067 Brassica napus ... 46 3.4 1
(ES972246) EX20LIB6_UP_045_B12_14APR2004_094 Brassica napus ... 46 3.4 1
(ES972229) EX20LIB6_UP_044_F04_14APR2004_022 Brassica napus ... 46 3.4 1
(ES971539) EX20LIB6_UP_020_F08_19MAR2004_054 Brassica napus ... 46 3.4 1
(ES971484) EX20LIB6_UP_018_F08_18MAR2004_054 Brassica napus ... 46 3.4 1
(DY227822) ID0AAK2YE09CM1 ApHL3SD Acyrthosiphon pisum cDNA c... 46 3.4 1
(CO354805) DR_ATE_NRM01_B10 adult testis normalized (TLL) Da... 46 3.4 1
(CN751642) ApHL3SD-XIV-B3 ApHL3SD Acyrthosiphon pisum cDNA c... 46 3.4 1
>(BJ348102) Dictyostelium discoideum cDNA clone:dda32n06, 3' end,
single read.
Length = 768
Score = 1515 bits (764), Expect = 0.0
Identities = 767/767 (100%)
Strand = Plus / Minus
Query: 576 attatcagcagattatagtcaattggaattgagaattttaacacattattcaaaggatcc 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 attatcagcagattatagtcaattggaattgagaattttaacacattattcaaaggatcc 709
Query: 636 aaatttaattgaaatgtttaactatagtagagaattagatgttttcaaatgtatcgctca 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 aaatttaattgaaatgtttaactatagtagagaattagatgttttcaaatgtatcgctca 649
Query: 696 tcaattaagtggtgttgattatgaaaaggtatcagatgaagaaagaaatttcgctaaaca 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 tcaattaagtggtgttgattatgaaaaggtatcagatgaagaaagaaatttcgctaaaca 589
Query: 756 tttagtttatggtattctttatggtatgggtataaattcaattgcttcagaattaaaagt 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 tttagtttatggtattctttatggtatgggtataaattcaattgcttcagaattaaaagt 529
Query: 816 tgataaagaaaaagcaaaagtacaattggaaagatttaaaaatacctatcgtactttaat 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tgataaagaaaaagcaaaagtacaattggaaagatttaaaaatacctatcgtactttaat 469
Query: 876 agatttcttagagtcaattgaagatagagttttcattgatgcttatattaaaactttatt 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 agatttcttagagtcaattgaagatagagttttcattgatgcttatattaaaactttatt 409
Query: 936 tggtagaattagaaatttctcggcaattcatgatccaaaaactttaccaaaagatattgg 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tggtagaattagaaatttctcggcaattcatgatccaaaaactttaccaaaagatattgg 349
Query: 996 taaaattaaaagaggtgctcgtaattctgttcctcaaggtactgctgccgatattacaaa 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 taaaattaaaagaggtgctcgtaattctgttcctcaaggtactgctgccgatattacaaa 289
Query: 1056 attagcaatgattaatattcaatcacaatttgatcaattatcaatcaatgttcatatggt 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 attagcaatgattaatattcaatcacaatttgatcaattatcaatcaatgttcatatggt 229
Query: 1116 attacaacttcatgatgaattactctttgaagtacctttaactgatatcgaccaatcagc 1175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 attacaacttcatgatgaattactctttgaagtacctttaactgatatcgaccaatcagc 169
Query: 1176 aaaaattataaaagagtcaatggaaaatgttgttaaattgaatgttcctttgccaattaa 1235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 aaaaattataaaagagtcaatggaaaatgttgttaaattgaatgttcctttgccaattaa 109
Query: 1236 aatgtctattggcactaattggggttctttagaatcttttaattttaattttacttattc 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 aatgtctattggcactaattggggttctttagaatcttttaattttaattttacttattc 49
Query: 1296 tcaacaaccaaaaaataaatatccaaanattaataaaaatttttcaa 1342
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 tcaacaaccaaaaaataaatatccaaanattaataaaaatttttcaa 2
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,288,937,221
Number of extensions: 86867870
Number of successful extensions: 7432461
Number of sequences better than 10.0: 134
Length of query: 1342
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1318
Effective length of database: 97,308,875,965
Effective search space: 128253098521870
Effective search space used: 128253098521870
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| Homology vs Protein |
Query= Contig-U11162-1 (Contig-U11162-1Q) /CSM_Contig/Contig-U11162-1Q.Seq.d
(1342 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ630550_1(DQ630550|pid:none) Danio rerio DNA polymerase nu (POL... 158 5e-37
AE016828_1548(AE016828|pid:none) Coxiella burnetii RSA 493, comp... 157 6e-37
AP008957_3322(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 156 1e-36
AY338826_1(AY338826|pid:none) Homo sapiens DNA polymerase theta ... 156 2e-36
CP001019_162(CP001019|pid:none) Coxiella burnetii CbuG_Q212, com... 156 2e-36
CP000487_223(CP000487|pid:none) Campylobacter fetus subsp. fetus... 156 2e-36
CP000890_1718(CP000890|pid:none) Coxiella burnetii RSA 331, comp... 156 2e-36
(O75417) RecName: Full=DNA polymerase theta; Short=DNA ... 155 2e-36
AF038543_1(AF038543|pid:none) Rhodococcus sp. ATCC15963 DNA poly... 155 2e-36
CP001020_79(CP001020|pid:none) Coxiella burnetii CbuK_Q154, comp... 155 4e-36
CP000361_1242(CP000361|pid:none) Arcobacter butzleri RM4018, com... 154 9e-36
CP000360_4474(CP000360|pid:none) Acidobacteria bacterium Ellin34... 154 9e-36
AJ749949_111(AJ749949|pid:none) Francisella tularensis subsp. tu... 153 1e-35
AY247648_1(AY247648|pid:none) Spirochaeta thermophila strain Z-1... 153 2e-35
CP000111_1353(CP000111|pid:none) Prochlorococcus marinus str. MI... 152 2e-35
DQ267496_8(DQ267496|pid:none) Uncultured delta proteobacterium D... 152 2e-35
CP000246_2198(CP000246|pid:none) Clostridium perfringens ATCC 13... 152 2e-35
AP009179_1315(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic ... 152 3e-35
AK139505_1(AK139505|pid:none) Mus musculus 2 cells egg cDNA, RIK... 152 3e-35
AY074936_1(AY074936|pid:none) Mus musculus DNA polymerase theta ... 152 3e-35
AY147862_1(AY147862|pid:none) Mus musculus DNA polymerase theta ... 152 3e-35
CP000555_1147(CP000555|pid:none) Methylibium petroleiphilum PM1,... 152 3e-35
CP000312_1920(CP000312|pid:none) Clostridium perfringens SM101, ... 152 3e-35
CP000551_1312(CP000551|pid:none) Prochlorococcus marinus str. AS... 152 3e-35
AF043628_1(AF043628|pid:none) Homo sapiens DNA polymerase eta (P... 152 3e-35
AP011115_719(AP011115|pid:none) Rhodococcus opacus B4 DNA, compl... 151 6e-35
AP009389_1976(AP009389|pid:none) Pelotomaculum thermopropionicum... 151 6e-35
CP001472_1660(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 150 1e-34
CP000511_3307(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 150 1e-34
AE017226_1626(AE017226|pid:none) Treponema denticola ATCC 35405,... 149 2e-34
CP001185_213(CP001185|pid:none) Thermosipho africanus TCF52B, co... 149 2e-34
CP000325_1332(CP000325|pid:none) Mycobacterium ulcerans Agy99, c... 149 3e-34
BT021359_1(BT021359|pid:none) Drosophila melanogaster LP14642 fu... 148 4e-34
CP000480_3707(CP000480|pid:none) Mycobacterium smegmatis str. MC... 148 5e-34
CP000027_1345(CP000027|pid:none) Dehalococcoides ethenogenes 195... 148 5e-34
(P46835) RecName: Full=DNA polymerase I; Short=POL I; ... 148 5e-34
AE014297_1625(AE014297|pid:none) Drosophila melanogaster chromos... 147 6e-34
CP000854_2411(CP000854|pid:none) Mycobacterium marinum M, comple... 147 6e-34
AM180355_1166(AM180355|pid:none) Clostridium difficile 630 compl... 147 6e-34
AY247643_1(AY247643|pid:none) Thermoanaerobacterium sp. AZ3B.1 D... 147 8e-34
CP000393_466(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 147 8e-34
CP000140_2885(CP000140|pid:none) Parabacteroides distasonis ATCC... 147 1e-33
EF089389_12(EF089389|pid:none) Uncultured marine bacterium HOT0_... 147 1e-33
A80873_1(A80873|pid:none) Sequence 10 from Patent EP0921196. &A... 147 1e-33
CP000141_1599(CP000141|pid:none) Carboxydothermus hydrogenoforma... 147 1e-33
AY247647_1(AY247647|pid:none) Tepidomonas sp. HM1 DNA polymerase... 147 1e-33
CP000384_2996(CP000384|pid:none) Mycobacterium sp. MCS, complete... 146 1e-33
CP000139_1167(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 146 1e-33
AM285301_40(AM285301|pid:none) Spiroplasma citri GII3-3X chromos... 145 3e-33
CP000103_567(CP000103|pid:none) Nitrosospira multiformis ATCC 25... 145 4e-33
CP000806_2253(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 144 5e-33
CP000860_1343(CP000860|pid:none) Candidatus Desulforudis audaxvi... 144 9e-33
CP000090_870(CP000090|pid:none) Ralstonia eutropha JMP134 chromo... 144 9e-33
AE016853_331(AE016853|pid:none) Pseudomonas syringae pv. tomato ... 143 1e-32
CP000947_1102(CP000947|pid:none) Haemophilus somnus 2336, comple... 143 1e-32
CP000612_1575(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 143 1e-32
CP000552_1303(CP000552|pid:none) Prochlorococcus marinus str. MI... 143 2e-32
CP001392_2615(CP001392|pid:none) Diaphorobacter sp. TPSY, comple... 142 2e-32
AE017143_1048(AE017143|pid:none) Haemophilus ducreyi strain 3500... 142 2e-32
CP000804_1466(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 142 3e-32
CP000112_3442(CP000112|pid:none) Desulfovibrio desulfuricans G20... 142 3e-32
CP001213_1467(CP001213|pid:none) Bifidobacterium animalis subsp.... 142 3e-32
CP000702_1157(CP000702|pid:none) Thermotoga petrophila RKU-1, co... 142 3e-32
AE000512_1592(AE000512|pid:none) Thermotoga maritima MSB8, compl... 142 3e-32
(Q9HT80) RecName: Full=DNA polymerase I; Short=POL I; ... 142 3e-32
CP000034_3585(CP000034|pid:none) Shigella dysenteriae Sd197, com... 142 4e-32
CP000744_6208(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 142 4e-32
CP000655_1702(CP000655|pid:none) Polynucleobacter necessarius su... 142 4e-32
CP000438_5815(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 142 4e-32
CP000885_2772(CP000885|pid:none) Clostridium phytofermentans ISD... 142 4e-32
AE001437_1085(AE001437|pid:none) Clostridium acetobutylicum ATCC... 142 4e-32
CP000923_2104(CP000923|pid:none) Thermoanaerobacter sp. X514, co... 142 4e-32
AX936058_1(AX936058|pid:none) Sequence 15 from Patent EP1361275. 141 5e-32
FM209186_5889(FM209186|pid:none) Pseudomonas aeruginosa LESB58 c... 141 5e-32
AE014295_629(AE014295|pid:none) Bifidobacterium longum NCC2705, ... 141 5e-32
CP000605_738(CP000605|pid:none) Bifidobacterium longum DJO10A, c... 141 5e-32
CP000937_1014(CP000937|pid:none) Francisella philomiragia subsp.... 141 6e-32
CP000284_358(CP000284|pid:none) Methylobacillus flagellatus KT, ... 141 6e-32
(Q7TQ07) RecName: Full=DNA polymerase nu; EC=2.7.7.7; 141 6e-32
CP001095_1682(CP001095|pid:none) Bifidobacterium longum subsp. i... 141 6e-32
CP001357_2537(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 141 6e-32
CP000478_1595(CP000478|pid:none) Syntrophobacter fumaroxidans MP... 141 6e-32
BC145378_1(BC145378|pid:none) Mus musculus DNA polymerase N, mRN... 141 6e-32
AY135562_1(AY135562|pid:none) Mus musculus DNA polymerase N mRNA... 141 6e-32
CP000109_44(CP000109|pid:none) Thiomicrospira crunogena XCL-2, c... 141 6e-32
CP000680_153(CP000680|pid:none) Pseudomonas mendocina ymp, compl... 140 8e-32
BX294155_239(BX294155|pid:none) Rhodopirellula baltica SH 1 comp... 140 8e-32
CP001581_3215(CP001581|pid:none) Clostridium botulinum A2 str. K... 140 1e-31
AP009256_680(AP009256|pid:none) Bifidobacterium adolescentis ATC... 140 1e-31
AM412317_3021(AM412317|pid:none) Clostridium botulinum A str. AT... 140 1e-31
CP000728_2920(CP000728|pid:none) Clostridium botulinum F str. La... 140 1e-31
CU928158_3492(CU928158|pid:none) Escherichia fergusonii ATCC 354... 140 1e-31
A79145_1(A79145|pid:none) Sequence 7 from Patent EP0835935. 140 1e-31
CP000350_2234(CP000350|pid:none) Leptospira borgpetersenii serov... 140 1e-31
CP000352_2615(CP000352|pid:none) Ralstonia metallidurans CH34, c... 140 1e-31
CP000970_4074(CP000970|pid:none) Escherichia coli SMS-3-5, compl... 140 1e-31
CP000802_3867(CP000802|pid:none) Escherichia coli HS, complete g... 140 1e-31
CU928164_3118(CU928164|pid:none) Escherichia coli IAI39 chromoso... 140 1e-31
CU928163_4286(CU928163|pid:none) Escherichia coli UMN026 chromos... 140 1e-31
NRL(1KFD2) Dna polymerase i (klenow fragment) (EC 2.7.7.7) compl... 140 1e-31
CP000247_4034(CP000247|pid:none) Escherichia coli 536, complete ... 140 1e-31
CU207366_138(CU207366|pid:none) Gramella forsetii KT0803 complet... 140 1e-31
CP000554_864(CP000554|pid:none) Prochlorococcus marinus str. MIT... 140 1e-31
BX248583_578(BX248583|pid:none) Blochmannia floridanus complete ... 139 2e-31
AE016823_570(AE016823|pid:none) Leptospira interrogans serovar C... 139 2e-31
CP000107_48(CP000107|pid:none) Ehrlichia canis str. Jake, comple... 139 2e-31
CU928162_4438(CU928162|pid:none) Escherichia coli ED1a chromosom... 139 2e-31
AE016958_1322(AE016958|pid:none) Mycobacterium avium subsp. para... 139 2e-31
CU651637_3749(CU651637|pid:none) Escherichia coli LF82 chromosom... 139 2e-31
CP000116_2453(CP000116|pid:none) Thiobacillus denitrificans ATCC... 139 2e-31
CP000348_500(CP000348|pid:none) Leptospira borgpetersenii serova... 139 2e-31
CP001083_3145(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 139 2e-31
CP000776_1615(CP000776|pid:none) Campylobacter hominis ATCC BAA-... 139 2e-31
CP000316_1698(CP000316|pid:none) Polaromonas sp. JS666, complete... 139 2e-31
BX640428_237(BX640428|pid:none) Bordetella parapertussis strain ... 139 2e-31
CP000686_3330(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 139 2e-31
CP001197_1697(CP001197|pid:none) Desulfovibrio vulgaris str. 'Mi... 139 2e-31
A40597(A40597;E75363;S42112;S42235) DNA-directed DNA polymerase ... 139 2e-31
CP001154_2965(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 139 2e-31
BX640414_251(BX640414|pid:none) Bordetella pertussis strain Toha... 139 2e-31
X98575_1(X98575|pid:none) A.thermophilum pol gene for DNA polyme... 139 2e-31
CP000127_518(CP000127|pid:none) Nitrosococcus oceani ATCC 19707,... 139 2e-31
FM180568_4170(FM180568|pid:none) Escherichia coli 0127:H6 E2348/... 139 3e-31
CP000875_69(CP000875|pid:none) Herpetosiphon aurantiacus ATCC 23... 139 3e-31
CP000976_528(CP000976|pid:none) Borrelia duttonii Ly, complete g... 139 3e-31
AY236419_1(AY236419|pid:none) Thermomicrobium roseum DNA polymer... 139 3e-31
CP000949_5075(CP000949|pid:none) Pseudomonas putida W619, comple... 139 3e-31
AF050678_1(AF050678|pid:none) Thermomicrobium roseum DNA polymer... 139 3e-31
CP000058_250(CP000058|pid:none) Pseudomonas syringae pv. phaseol... 138 4e-31
AE014073_3281(AE014073|pid:none) Shigella flexneri 2a str. 2457T... 138 4e-31
AP009247_81(AP009247|pid:none) Candidatus Vesicomyosocius okutan... 138 4e-31
CU207211_254(CU207211|pid:none) Herminiimonas arsenicoxydans chr... 138 4e-31
AP008955_1405(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 138 4e-31
CU458896_2593(CU458896|pid:none) Mycobacterium abscessus chromos... 138 4e-31
AE005674_3936(AE005674|pid:none) Shigella flexneri 2a str. 301, ... 138 4e-31
CP000724_3021(CP000724|pid:none) Alkaliphilus metalliredigens QY... 138 5e-31
AP008231_1317(AP008231|pid:none) Synechococcus elongatus PCC 630... 138 5e-31
BX950851_21(BX950851|pid:none) Erwinia carotovora subsp. atrosep... 138 5e-31
CP000100_194(CP000100|pid:none) Synechococcus elongatus PCC 7942... 138 5e-31
AM946015_1672(AM946015|pid:none) Streptococcus uberis 0140J comp... 138 5e-31
CP000687_475(CP000687|pid:none) Actinobacillus pleuropneumoniae ... 138 5e-31
AM181176_79(AM181176|pid:none) Pseudomonas fluorescens SBW25 com... 138 5e-31
(Q55971) RecName: Full=DNA polymerase I; Short=POL I; ... 138 5e-31
CP000076_82(CP000076|pid:none) Pseudomonas fluorescens Pf-5, com... 137 7e-31
CP000749_278(CP000749|pid:none) Marinomonas sp. MWYL1, complete ... 137 7e-31
CP000304_113(CP000304|pid:none) Pseudomonas stutzeri A1501, comp... 137 7e-31
CP000783_3914(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 137 7e-31
CP001344_643(CP001344|pid:none) Cyanothece sp. PCC 7425, complet... 137 7e-31
BX548175_1510(BX548175|pid:none) Prochlorococcus marinus MIT9313... 137 9e-31
AM260479_2668(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 137 9e-31
AC127429_22(AC127429|pid:none) Medicago truncatula clone mth2-9o... 137 9e-31
(P0A550) RecName: Full=DNA polymerase I; Short=POL I; ... 137 9e-31
AY247640_1(AY247640|pid:none) Caldicellulosiruptor saccharolytic... 137 1e-30
CT573073_10(CT573073|pid:none) Kuenenia stuttgartiensis genome f... 137 1e-30
AE014613_3377(AE014613|pid:none) Salmonella enterica subsp. ente... 137 1e-30
CP001504_1445(CP001504|pid:none) Burkholderia glumae BGR1 chromo... 137 1e-30
CP000814_313(CP000814|pid:none) Campylobacter jejuni subsp. jeju... 137 1e-30
CP001111_3935(CP001111|pid:none) Stenotrophomonas maltophilia R5... 137 1e-30
CP001034_1864(CP001034|pid:none) Natranaerobius thermophilus JW/... 137 1e-30
AM933172_3774(AM933172|pid:none) Salmonella enterica subsp. ente... 137 1e-30
AY247638_1(AY247638|pid:none) Caldicellulosiruptor saccharolytic... 137 1e-30
AP006840_848(AP006840|pid:none) Symbiobacterium thermophilum IAM... 137 1e-30
CP001138_3941(CP001138|pid:none) Salmonella enterica subsp. ente... 137 1e-30
CP000767_1536(CP000767|pid:none) Campylobacter curvus 525.92, co... 137 1e-30
AM942759_2802(AM942759|pid:none) Proteus mirabilis strain HI4320... 137 1e-30
AL111168_308(AL111168|pid:none) Campylobacter jejuni subsp. jeju... 136 1e-30
AE015928_3259(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 136 1e-30
CP000382_784(CP000382|pid:none) Clostridium novyi NT, complete g... 136 1e-30
AM743169_4327(AM743169|pid:none) Stenotrophomonas maltophilia K2... 136 1e-30
CP000409_957(CP000409|pid:none) Rickettsia canadensis str. McKie... 136 1e-30
CP000822_3061(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 136 2e-30
AM167904_2385(AM167904|pid:none) Bordetella avium 197N complete ... 136 2e-30
CP000094_56(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, co... 136 2e-30
CP001251_822(CP001251|pid:none) Dictyoglomus turgidum DSM 6724, ... 136 2e-30
CP000025_373(CP000025|pid:none) Campylobacter jejuni RM1221, com... 136 2e-30
A86567(A86567) DNA polymerase I [imported] - Chlamydophila pneum... 136 2e-30
CP000712_138(CP000712|pid:none) Pseudomonas putida F1, complete ... 135 3e-30
CP001127_3912(CP001127|pid:none) Salmonella enterica subsp. ente... 135 3e-30
AX763696_1(AX763696|pid:none) Sequence 3 from Patent WO03040180.... 135 3e-30
AP009510_13(AP009510|pid:none) Uncultured Termite group 1 bacter... 135 3e-30
CP001098_481(CP001098|pid:none) Halothermothrix orenii H 168, co... 135 3e-30
(Q7Z5Q5) RecName: Full=DNA polymerase nu; EC=2.7.7.7; ... 135 3e-30
BX927152_26(BX927152|pid:none) Corynebacterium glutamicum ATCC 1... 135 3e-30
A84044(A84044) DNA polymerase I polA [imported] - Bacillus halod... 135 3e-30
AP009552_1810(AP009552|pid:none) Microcystis aeruginosa NIES-843... 135 3e-30
CP000448_1953(CP000448|pid:none) Syntrophomonas wolfei subsp. wo... 135 3e-30
AE017354_98(AE017354|pid:none) Legionella pneumophila subsp. pne... 135 3e-30
CU633749_2187(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 135 3e-30
CP000880_3516(CP000880|pid:none) Salmonella enterica subsp. ariz... 135 3e-30
AE015451_123(AE015451|pid:none) Pseudomonas putida KT2440 comple... 135 4e-30
CP000423_1616(CP000423|pid:none) Lactobacillus casei ATCC 334, c... 135 4e-30
CP000964_5372(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 135 4e-30
CP000153_1240(CP000153|pid:none) Sulfurimonas denitrificans DSM ... 135 4e-30
AF044578_1(AF044578|pid:none) Homo sapiens putative DNA polymera... 135 4e-30
CP000085_603(CP000085|pid:none) Burkholderia thailandensis E264 ... 134 6e-30
CP001574_768(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 134 6e-30
CP000571_2533(CP000571|pid:none) Burkholderia pseudomallei 668 c... 134 6e-30
CP000089_163(CP000089|pid:none) Dechloromonas aromatica RCB, com... 134 6e-30
CP000450_755(CP000450|pid:none) Nitrosomonas eutropha C91, compl... 134 6e-30
CP000011_307(CP000011|pid:none) Burkholderia mallei ATCC 23344 c... 134 6e-30
AP009493_5527(AP009493|pid:none) Streptomyces griseus subsp. gri... 134 6e-30
CP000813_2511(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 134 6e-30
CP000125_850(CP000125|pid:none) Burkholderia pseudomallei 1710b ... 134 6e-30
CP000884_5307(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 134 7e-30
CP000057_901(CP000057|pid:none) Haemophilus influenzae 86-028NP,... 134 7e-30
BA000045_636(BA000045|pid:none) Gloeobacter violaceus PCC 7421 D... 134 7e-30
U57757_1(U57757|pid:none) Treponema pallidum PolA gene, partial ... 134 7e-30
CP001037_5680(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 134 7e-30
AM778944_20(AM778944|pid:none) Microcystis aeruginosa PCC 7806 g... 134 7e-30
CP000826_4869(CP000826|pid:none) Serratia proteamaculans 568, co... 134 1e-29
CP001291_4127(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 134 1e-29
CS161661_1(CS161661|pid:none) Sequence 19 from Patent WO20050830... 134 1e-29
AE016825_779(AE016825|pid:none) Chromobacterium violaceum ATCC 1... 134 1e-29
CR628337_99(CR628337|pid:none) Legionella pneumophila str. Lens ... 134 1e-29
AP006618_1885(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 134 1e-29
CP000252_584(CP000252|pid:none) Syntrophus aciditrophicus SB, co... 134 1e-29
CP001616_336(CP001616|pid:none) Tolumonas auensis DSM 9187, comp... 134 1e-29
CP000359_1652(CP000359|pid:none) Deinococcus geothermalis DSM 11... 133 1e-29
CP000878_1215(CP000878|pid:none) Prochlorococcus marinus str. MI... 133 1e-29
AE017198_1444(AE017198|pid:none) Lactobacillus johnsonii NCC 533... 133 1e-29
AM884176_748(AM884176|pid:none) Chlamydia trachomatis strain L2/... 133 1e-29
BX569690_348(BX569690|pid:none) Synechococcus sp. WH8102 complet... 133 1e-29
CP000721_795(CP000721|pid:none) Clostridium beijerinckii NCIMB 8... 133 1e-29
CP000961_60(CP000961|pid:none) Shewanella woodyi ATCC 51908, com... 133 2e-29
CP001056_2568(CP001056|pid:none) Clostridium botulinum B str. Ek... 133 2e-29
CR954246_2691(CR954246|pid:none) Pseudoalteromonas haloplanktis ... 133 2e-29
AJ238760_2(AJ238760|pid:none) Rickettsia montana ftsY (partial),... 133 2e-29
CR626927_103(CR626927|pid:none) Bacteroides fragilis NCTC 9343, ... 133 2e-29
AY945938_1(AY945938|pid:none) Thermus aquaticus DNA polymerase l... 133 2e-29
CP001078_2313(CP001078|pid:none) Clostridium botulinum E3 str. A... 133 2e-29
CP001147_1430(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 132 2e-29
AE004439_1065(AE004439|pid:none) Pasteurella multocida subsp. mu... 132 2e-29
AM180252_102(AM180252|pid:none) Lawsonia intracellularis PHE/MN1... 132 2e-29
AM849034_1970(AM849034|pid:none) Clavibacter michiganensis subsp... 132 2e-29
FJ358544_1(FJ358544|pid:none) Thermus sp. OH.A2 PolI (polI) gene... 132 2e-29
BX571860_59(BX571860|pid:none) Photorhabdus luminescens subsp. l... 132 2e-29
AE016827_225(AE016827|pid:none) Mannheimia succiniciproducens MB... 132 3e-29
AY142940_1(AY142940|pid:none) Heliobacillus mobilis DNA polymera... 132 3e-29
FJ358545_1(FJ358545|pid:none) Thermus sp. Tok23.A1 PolI (polI) g... 132 3e-29
CP001053_2708(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 132 3e-29
(O52225) RecName: Full=DNA polymerase I, thermostable; ... 132 3e-29
CP000746_21(CP000746|pid:none) Actinobacillus succinogenes 130Z,... 132 3e-29
CP000683_854(CP000683|pid:none) Rickettsia massiliae MTU5, compl... 132 3e-29
AJ238758_2(AJ238758|pid:none) Rickettsia rickettsii (strain 84-2... 132 3e-29
(O08307) RecName: Full=DNA polymerase I; Short=POL I; ... 132 4e-29
FN357439_3(FN357439|pid:none) Schistosoma mansoni genome sequenc... 132 4e-29
CP000847_1103(CP000847|pid:none) Rickettsia akari str. Hartford,... 132 4e-29
CP001227_374(CP001227|pid:none) Rickettsia peacockii str. Rustic... 132 4e-29
CS161738_1(CS161738|pid:none) Sequence 96 from Patent WO20050830... 132 4e-29
AM286690_2659(AM286690|pid:none) Alcanivorax borkumensis SK2, co... 132 4e-29
CS161718_1(CS161718|pid:none) Sequence 76 from Patent WO20050830... 132 4e-29
CS161728_1(CS161728|pid:none) Sequence 86 from Patent WO20050830... 132 4e-29
CS161722_1(CS161722|pid:none) Sequence 80 from Patent WO20050830... 132 4e-29
AM286415_21(AM286415|pid:none) Yersinia enterocolitica subsp. en... 132 4e-29
CS161716_1(CS161716|pid:none) Sequence 74 from Patent WO20050830... 131 5e-29
CT971583_1617(CT971583|pid:none) Synechococcus WH7803 complete g... 131 5e-29
CP000553_1582(CP000553|pid:none) Prochlorococcus marinus str. NA... 131 5e-29
CS161714_1(CS161714|pid:none) Sequence 72 from Patent WO20050830... 131 5e-29
AE001273_505(AE001273|pid:none) Chlamydia trachomatis D/UW-3/CX,... 131 5e-29
CP001157_62(CP001157|pid:none) Azotobacter vinelandii DJ, comple... 131 5e-29
CS800132_1(CS800132|pid:none) Sequence 3 from Patent EP1832652. 131 6e-29
AE016795_858(AE016795|pid:none) Vibrio vulnificus CMCP6 chromoso... 131 6e-29
JX0359(JX0359)DNA-directed DNA polymerase (EC 2.7.7.7) - Thermus... 131 6e-29
CP000653_4066(CP000653|pid:none) Enterobacter sp. 638, complete ... 131 6e-29
CS161724_1(CS161724|pid:none) Sequence 82 from Patent WO20050830... 131 6e-29
AX093145_1(AX093145|pid:none) Sequence 3 from Patent WO0118213. 131 6e-29
CS161667_1(CS161667|pid:none) Sequence 25 from Patent WO20050830... 131 6e-29
CP000240_125(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-13... 131 6e-29
CS018149_1(CS018149|pid:none) Sequence 1 from Patent EP1507002. 131 6e-29
BA000037_186(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, chr... 131 6e-29
CP000817_3931(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 131 6e-29
D32013_1(D32013|pid:none) Thermus aquaticus gene for DNA polymer... 131 6e-29
CP001068_2402(CP001068|pid:none) Ralstonia pickettii 12J chromos... 131 6e-29
BX897699_6(BX897699|pid:none) Bartonella henselae strain Houston... 131 6e-29
CP000117_579(CP000117|pid:none) Anabaena variabilis ATCC 29413, ... 131 6e-29
AJ238761_2(AJ238761|pid:none) Rickettsia rhipicephali ftsY (part... 130 8e-29
CR954209_389(CR954209|pid:none) Ostreococcus tauri strain OTTH05... 130 8e-29
CS161665_1(CS161665|pid:none) Sequence 23 from Patent WO20050830... 130 8e-29
CT573326_73(CT573326|pid:none) Pseudomonas entomophila str. L48 ... 130 8e-29
CP001359_2622(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 130 8e-29
CP000931_4184(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 130 8e-29
AM260525_6(AM260525|pid:none) Bartonella tribocorum CIP 105476 c... 130 8e-29
CP001279_353(CP001279|pid:none) Nautilia profundicola AmH, compl... 130 8e-29
CP001114_1673(CP001114|pid:none) Deinococcus deserti VCD115, com... 130 1e-28
(P43741) RecName: Full=DNA polymerase I; Short=POL I; ... 130 1e-28
CP000395_552(CP000395|pid:none) Borrelia afzelii PKo, complete g... 130 1e-28
CS161708_1(CS161708|pid:none) Sequence 66 from Patent WO20050830... 130 1e-28
FM211053_58(FM211053|pid:none) Photorhabdus asymbiotica subsp. a... 130 1e-28
AM420293_5317(AM420293|pid:none) Saccharopolyspora erythraea NRR... 130 1e-28
CP001337_3475(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 130 1e-28
CP000088_1187(CP000088|pid:none) Thermobifida fusca YX, complete... 130 1e-28
CP000388_15(CP000388|pid:none) Pseudoalteromonas atlantica T6c, ... 130 1e-28
CP000030_844(CP000030|pid:none) Anaplasma marginale str. St. Mar... 130 1e-28
CP000412_1224(CP000412|pid:none) Lactobacillus delbrueckii subsp... 130 1e-28
CT978603_1669(CT978603|pid:none) Synechococcus sp. RCC307 genomi... 130 1e-28
CP000407_1370(CP000407|pid:none) Streptococcus suis 05ZYH33, com... 130 1e-28
(P30313) RecName: Full=DNA polymerase I, thermostable; ... 130 1e-28
CP000517_1252(CP000517|pid:none) Lactobacillus helveticus DPC 45... 130 1e-28
CP000235_1(CP000235|pid:none) Anaplasma phagocytophilum HZ, comp... 130 1e-28
AY247637_1(AY247637|pid:none) Caldibacillus cellulovorans strain... 130 1e-28
AE017321_721(AE017321|pid:none) Wolbachia endosymbiont strain TR... 129 2e-28
AE004969_1931(AE004969|pid:none) Neisseria gonorrhoeae FA 1090, ... 129 2e-28
CP001612_909(CP001612|pid:none) Rickettsia africae ESF-5, comple... 129 2e-28
CS161732_1(CS161732|pid:none) Sequence 90 from Patent WO20050830... 129 2e-28
CP001620_770(CP001620|pid:none) Corynebacterium kroppenstedtii D... 129 2e-28
FJ384791_1(FJ384791|pid:none) Uncultured bacterium clone pCS5 DN... 129 2e-28
CS161736_1(CS161736|pid:none) Sequence 94 from Patent WO20050830... 129 2e-28
CP001050_2570(CP001050|pid:none) Neisseria gonorrhoeae NCCP11945... 129 2e-28
CS161677_1(CS161677|pid:none) Sequence 35 from Patent WO20050830... 129 2e-28
FJ384787_2(FJ384787|pid:none) Uncultured bacterium clone pCS1 tr... 129 2e-28
CP000441_24(CP000441|pid:none) Burkholderia ambifaria AMMD chrom... 129 2e-28
CP000381_209(CP000381|pid:none) Neisseria meningitidis 053442, c... 129 2e-28
EU708319_1(EU708319|pid:none) Thermus thermophilus strain HJ6 DN... 129 2e-28
CP000488_74(CP000488|pid:none) Candidatus Ruthia magnifica str. ... 129 2e-28
AE017126_1232(AE017126|pid:none) Prochlorococcus marinus subsp. ... 129 2e-28
CP000615_926(CP000615|pid:none) Burkholderia vietnamiensis G4 ch... 129 2e-28
CP000394_1965(CP000394|pid:none) Granulibacter bethesdensis CGDN... 129 2e-28
CP000472_4839(CP000472|pid:none) Shewanella piezotolerans WP3, c... 129 2e-28
CP000379_1494(CP000379|pid:none) Burkholderia cenocepacia AU 105... 129 2e-28
CP001339_86(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, co... 129 2e-28
(Q92GB7) RecName: Full=DNA polymerase I; Short=POL I; ... 129 2e-28
CP001358_1046(CP001358|pid:none) Desulfovibrio desulfuricans sub... 129 2e-28
CS277145_1(CS277145|pid:none) Sequence 65 from Patent EP1634890.... 129 2e-28
CP001026_659(CP001026|pid:none) Burkholderia ambifaria MC40-6 ch... 129 3e-28
BA000035_1453(BA000035|pid:none) Corynebacterium efficiens YS-31... 129 3e-28
AM494475_1022(AM494475|pid:none) Orientia tsutsugamushi Boryong ... 129 3e-28
CP000671_1362(CP000671|pid:none) Haemophilus influenzae PittEE, ... 129 3e-28
CP000110_1925(CP000110|pid:none) Synechococcus sp. CC9605, compl... 129 3e-28
AP009324_1677(AP009324|pid:none) Staphylococcus aureus subsp. au... 129 3e-28
AF193842_1(AF193842|pid:none) Staphylococcus aureus DNA polymera... 129 3e-28
CP000155_6077(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 129 3e-28
CP000672_1281(CP000672|pid:none) Haemophilus influenzae PittGG, ... 129 3e-28
FM204884_158(FM204884|pid:none) Streptococcus equi subsp. zooepi... 129 3e-28
CP001013_1055(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 129 3e-28
CS277150_1(CS277150|pid:none) Sequence 70 from Patent EP1634890.... 128 4e-28
FJ358542_1(FJ358542|pid:none) Thermus sp. YSP2A.A1 PolI (polI) g... 128 4e-28
CP000485_3956(CP000485|pid:none) Bacillus thuringiensis str. Al ... 128 4e-28
CP000387_91(CP000387|pid:none) Streptococcus sanguinis SK36, com... 128 4e-28
CP001601_1370(CP001601|pid:none) Corynebacterium aurimucosum ATC... 128 4e-28
AE017355_4272(AE017355|pid:none) Bacillus thuringiensis serovar ... 128 4e-28
CP000003_205(CP000003|pid:none) Streptococcus pyogenes MGAS10394... 128 4e-28
AB275482_1(AB275482|pid:none) Bacillus smithii polA gene for DNA... 128 4e-28
CP001407_4507(CP001407|pid:none) Bacillus cereus 03BB102, comple... 128 4e-28
CP001252_4214(CP001252|pid:none) Shewanella baltica OS223, compl... 128 5e-28
AE016879_4462(AE016879|pid:none) Bacillus anthracis str. Ames, c... 128 5e-28
CP000753_4286(CP000753|pid:none) Shewanella baltica OS185, compl... 128 5e-28
CP001186_4599(CP001186|pid:none) Bacillus cereus G9842, complete... 128 5e-28
CP000435_902(CP000435|pid:none) Synechococcus sp. CC9311, comple... 128 5e-28
AE017282_2440(AE017282|pid:none) Methylococcus capsulatus str. B... 128 5e-28
FJ215762_1(FJ215762|pid:none) Anoxybacillus sp. NB DNA polymeras... 128 5e-28
FJ384792_1(FJ384792|pid:none) Uncultured bacterium clone pCS6 DN... 128 5e-28
AF051319_1(AF051319|pid:none) Streptomyces griseus DNA polymeras... 128 5e-28
(O51498) RecName: Full=DNA polymerase I; Short=POL I; ... 128 5e-28
FJ215760_1(FJ215760|pid:none) Geobacillus anatolicus strain C4 D... 128 5e-28
AE016877_4384(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 128 5e-28
AJ938182_1549(AJ938182|pid:none) Staphylococcus aureus RF122 com... 127 7e-28
CP000453_2841(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-... 127 7e-28
AE017221_690(AE017221|pid:none) Thermus thermophilus HB27, compl... 127 7e-28
AM295250_1287(AM295250|pid:none) Staphylococcus carnosus subsp. ... 127 7e-28
AM295007_152(AM295007|pid:none) Streptococcus pyogenes Manfredo ... 127 9e-28
AP006627_2701(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 127 9e-28
CP000262_165(CP000262|pid:none) Streptococcus pyogenes MGAS10750... 127 9e-28
CP000056_156(CP000056|pid:none) Streptococcus pyogenes MGAS6180,... 127 9e-28
CP001177_4513(CP001177|pid:none) Bacillus cereus AH187, complete... 127 9e-28
BX571658_72(BX571658|pid:none) Wolinella succinogenes, complete ... 127 9e-28
CS161706_1(CS161706|pid:none) Sequence 64 from Patent WO20050830... 127 9e-28
CP000227_4287(CP000227|pid:none) Bacillus cereus Q1, complete ge... 127 9e-28
CS161663_1(CS161663|pid:none) Sequence 21 from Patent WO20050830... 127 9e-28
BX571856_1732(BX571856|pid:none) Staphylococcus aureus subsp. au... 127 9e-28
CP000260_161(CP000260|pid:none) Streptococcus pyogenes MGAS10270... 127 9e-28
AE009951_1281(AE009951|pid:none) Fusobacterium nucleatum subsp. ... 127 1e-27
(O05949) RecName: Full=DNA polymerase I; Short=POL I; ... 127 1e-27
AE002160_764(AE002160|pid:none) Chlamydia muridarum Nigg, comple... 127 1e-27
(Q1RH76) RecName: Full=DNA polymerase I; Short=POL I; ... 127 1e-27
(P80194) RecName: Full=DNA polymerase I, thermostable; ... 127 1e-27
AM942444_1143(AM942444|pid:none) Corynebacterium urealyticum DSM... 127 1e-27
CP001139_71(CP001139|pid:none) Vibrio fischeri MJ11 chromosome I... 127 1e-27
AE017285_494(AE017285|pid:none) Desulfovibrio vulgaris subsp. vu... 127 1e-27
AE004092_140(AE004092|pid:none) Streptococcus pyogenes M1 GAS, c... 127 1e-27
AL939111_40(AL939111|pid:none) Streptomyces coelicolor A3(2) com... 127 1e-27
AL022537_10(AL022537|pid:none) Arabidopsis thaliana DNA chromoso... 127 1e-27
AB0003(AB0003) DNA-directed DNA polymerase (EC 2.7.7.7) [importe... 126 2e-27
EF488810_1(EF488810|pid:none) Bacillus caldolyticus strain XM DN... 126 2e-27
CR931997_818(CR931997|pid:none) Corynebacterium jeikeium K411 co... 126 2e-27
CP001029_2365(CP001029|pid:none) Methylobacterium populi BJ001, ... 126 2e-27
AM039952_4200(AM039952|pid:none) Xanthomonas campestris pv. vesi... 126 2e-27
CP001132_2623(CP001132|pid:none) Acidithiobacillus ferrooxidans ... 126 2e-27
(P52028) RecName: Full=DNA polymerase I, thermostable; ... 126 2e-27
AP008981_506(AP008981|pid:none) Orientia tsutsugamushi str. Iked... 126 2e-27
CP001349_1441(CP001349|pid:none) Methylobacterium nodulans ORS 2... 126 2e-27
(Q04957) RecName: Full=DNA polymerase I; Short=POL I; ... 126 2e-27
CP000720_18(CP000720|pid:none) Yersinia pseudotuberculosis IP 31... 126 2e-27
AP008971_343(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 126 2e-27
CR378674_100(CR378674|pid:none) Photobacterium profundum SS9; se... 126 2e-27
CP001298_2563(CP001298|pid:none) Methylobacterium chloromethanic... 126 2e-27
DQ340803_1(DQ340803|pid:none) Geobacillus caldoxylosilyticus DNA... 126 2e-27
CR522870_1087(CR522870|pid:none) Desulfotalea psychrophila LSv54... 126 2e-27
AE014133_268(AE014133|pid:none) Streptococcus mutans UA159, comp... 126 2e-27
AP009484_1359(AP009484|pid:none) Macrococcus caseolyticus JCSC54... 126 2e-27
CR555306_2255(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 126 2e-27
CP000261_170(CP000261|pid:none) Streptococcus pyogenes MGAS2096,... 126 2e-27
CP000725_144(CP000725|pid:none) Streptococcus gordonii str. Chal... 126 2e-27
CP001055_485(CP001055|pid:none) Elusimicrobium minutum Pei191, c... 126 2e-27
AE017283_765(AE017283|pid:none) Propionibacterium acnes KPA17120... 126 2e-27
AE002098_1897(AE002098|pid:none) Neisseria meningitidis MC58, co... 126 2e-27
EF198253_1(EF198253|pid:none) Bacillus sp. G(2006) DNA polymeras... 125 3e-27
AP010656_268(AP010656|pid:none) Candidatus Azobacteroides pseudo... 125 3e-27
AE014299_4541(AE014299|pid:none) Shewanella oneidensis MR-1, com... 125 3e-27
CP000628_201(CP000628|pid:none) Agrobacterium radiobacter K84 ch... 125 3e-27
FJ215758_1(FJ215758|pid:none) Geobacillus bogazici strain NT DNA... 125 3e-27
CP000013_536(CP000013|pid:none) Borrelia garinii PBi, complete g... 125 3e-27
CP000503_45(CP000503|pid:none) Shewanella sp. W3-18-1, complete ... 125 3e-27
CP000681_3876(CP000681|pid:none) Shewanella putrefaciens CN-32, ... 125 3e-27
CP001089_2772(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 125 3e-27
FJ215757_1(FJ215757|pid:none) Geobacillus kaue strain NB DNA pol... 125 3e-27
CP000083_4835(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 125 3e-27
AJ242630_1(AJ242630|pid:none) Methylobacterium dichloromethanicu... 125 3e-27
AE009949_148(AE009949|pid:none) Streptococcus pyogenes MGAS8232,... 125 3e-27
FM178379_227(FM178379|pid:none) Aliivibrio salmonicida LFI1238 c... 125 3e-27
CP001001_3486(CP001001|pid:none) Methylobacterium radiotolerans ... 125 3e-27
BA000031_107(BA000031|pid:none) Vibrio parahaemolyticus RIMD 221... 125 3e-27
AM263198_1578(AM263198|pid:none) Listeria welshimeri serovar 6b ... 125 3e-27
CR543861_2731(CR543861|pid:none) Acinetobacter sp. ADP1 complete... 125 3e-27
CP001100_2613(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 125 5e-27
DQ244056_1(DQ244056|pid:none) Geobacillus sp. MKK-2005 thermosta... 125 5e-27
CP000829_148(CP000829|pid:none) Streptococcus pyogenes NZ131, co... 125 5e-27
CP000411_605(CP000411|pid:none) Oenococcus oeni PSU-1, complete ... 125 5e-27
CP000425_2251(CP000425|pid:none) Lactococcus lactis subsp. cremo... 125 5e-27
AB275481_1(AB275481|pid:none) Alicyclobacillus acidocaldarius su... 125 5e-27
AP006861_878(AP006861|pid:none) Chlamydophila felis Fe/C-56 DNA,... 125 5e-27
CP000447_3906(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 125 5e-27
(O34996) RecName: Full=DNA polymerase I; Short=POL I; ... 125 5e-27
CP000446_3886(CP000446|pid:none) Shewanella sp. MR-4, complete g... 125 5e-27
U86402_1(U86402|pid:none) Bacillus subtilis DNA polymerase I gen... 125 5e-27
CP000850_3238(CP000850|pid:none) Salinispora arenicola CNS-205, ... 124 6e-27
AE003852_108(AE003852|pid:none) Vibrio cholerae O1 biovar eltor ... 124 6e-27
CP000920_84(CP000920|pid:none) Streptococcus pneumoniae P1031, c... 124 6e-27
CP000936_119(CP000936|pid:none) Streptococcus pneumoniae Hungary... 124 6e-27
CP000123_604(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 124 6e-27
CP001485_539(CP001485|pid:none) Vibrio cholerae MJ-1236 chromoso... 124 6e-27
AL646052_2228(AL646052|pid:none) Ralstonia solanacearum GMI1000 ... 124 6e-27
AE016830_802(AE016830|pid:none) Enterococcus faecalis V583, comp... 124 6e-27
CP000302_3598(CP000302|pid:none) Shewanella denitrificans OS217,... 124 6e-27
AP009380_1771(AP009380|pid:none) Porphyromonas gingivalis ATCC 3... 124 6e-27
FM211187_42(FM211187|pid:none) Streptococcus pneumoniae ATCC 700... 124 6e-27
AE015924_1536(AE015924|pid:none) Porphyromonas gingivalis W83, c... 124 6e-27
(P59200) RecName: Full=DNA polymerase I; Short=POL I; ... 124 6e-27
CP000263_242(CP000263|pid:none) Buchnera aphidicola str. Cc (Cin... 124 8e-27
AE008688_104(AE008688|pid:none) Agrobacterium tumefaciens str. C... 124 8e-27
CP000921_61(CP000921|pid:none) Streptococcus pneumoniae Taiwan19... 124 8e-27
U78771_2(U78771|pid:none) Lactococcus lactis DNA polymerase I (p... 124 8e-27
CP001033_32(CP001033|pid:none) Streptococcus pneumoniae CGSP14, ... 124 8e-27
CP000918_85(CP000918|pid:none) Streptococcus pneumoniae 70585, c... 124 8e-27
(O32801) RecName: Full=DNA polymerase I; Short=POL I; ... 124 8e-27
FJ384788_1(FJ384788|pid:none) Uncultured bacterium clone pCS2 DN... 124 1e-26
FM242711_1548(FM242711|pid:none) Listeria monocytogenes Clip8145... 124 1e-26
AE017262_1572(AE017262|pid:none) Listeria monocytogenes str. 4b ... 124 1e-26
CP000082_378(CP000082|pid:none) Psychrobacter arcticus 273-4, co... 124 1e-26
CP000589_355(CP000589|pid:none) Ostreococcus lucimarinus CCE9901... 124 1e-26
(P52026) RecName: Full=DNA polymerase I; Short=POL I; ... 124 1e-26
AC116957_15(AC116957|pid:none) Dictyostelium discoideum chromoso... 124 1e-26
L42111_1(L42111|pid:none) Bacillus stearothermophilus DNA polyme... 124 1e-26
AE008923_4053(AE008923|pid:none) Xanthomonas axonopodis pv. citr... 124 1e-26
CP000821_96(CP000821|pid:none) Shewanella sediminis HAW-EB3, com... 123 1e-26
CP000560_2523(CP000560|pid:none) Bacillus amyloliquefaciens FZB4... 123 1e-26
CP000943_650(CP000943|pid:none) Methylobacterium sp. 4-46, compl... 123 1e-26
CP000481_1084(CP000481|pid:none) Acidothermus cellulolyticus 11B... 123 1e-26
CP000023_1630(CP000023|pid:none) Streptococcus thermophilus LMG ... 123 1e-26
CP000758_136(CP000758|pid:none) Ochrobactrum anthropi ATCC 49188... 123 1e-26
AE015925_127(AE015925|pid:none) Chlamydophila caviae GPIC, compl... 123 2e-26
CP000386_3091(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 123 2e-26
(Q9RLA0) RecName: Full=DNA polymerase I; Short=POL I; ... 123 2e-26
CP000698_3833(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 123 2e-26
CP000585_34(CP000585|pid:none) Ostreococcus lucimarinus CCE9901 ... 122 2e-26
CU459003_2292(CU459003|pid:none) Magnetospirillum gryphiswaldens... 122 2e-26
CP000454_2042(CP000454|pid:none) Arthrobacter sp. FB24, complete... 122 3e-26
A32949(A32949) DNA-directed DNA polymerase (EC 2.7.7.7) - Strept... 122 3e-26
AE017223_113(AE017223|pid:none) Brucella abortus biovar 1 str. 9... 122 3e-26
CP000910_2273(CP000910|pid:none) Renibacterium salmoninarum ATCC... 122 3e-26
AF063186_1(AF063186|pid:none) Arthrobacter paraffineus DNA polym... 122 3e-26
EF106972_80(EF106972|pid:none) Uncultured marine Nitrospinaceae ... 122 3e-26
CP000474_1976(CP000474|pid:none) Arthrobacter aurescens TC1, com... 122 3e-26
CP000024_1660(CP000024|pid:none) Streptococcus thermophilus CNRZ... 122 3e-26
AE014291_121(AE014291|pid:none) Brucella suis 1330 chromosome I,... 122 3e-26
BA000012_2540(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 122 3e-26
CP000769_2436(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 122 4e-26
CP001016_2657(CP001016|pid:none) Beijerinckia indica subsp. indi... 122 4e-26
CP000820_2011(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 122 4e-26
CP000323_418(CP000323|pid:none) Psychrobacter cryohalolentis K5,... 122 4e-26
U93028_1(U93028|pid:none) Bacillus stearothermophilus DNA polyme... 121 5e-26
AE008922_3964(AE008922|pid:none) Xanthomonas campestris pv. camp... 121 5e-26
CP001196_3516(CP001196|pid:none) Oligotropha carboxidovorans OM5... 121 5e-26
CP000029_1227(CP000029|pid:none) Staphylococcus epidermidis RP62... 121 5e-26
CP001182_702(CP001182|pid:none) Acinetobacter baumannii AB0057, ... 121 7e-26
CP000863_616(CP000863|pid:none) Acinetobacter baumannii ACICU, c... 121 7e-26
CP000521_594(CP000521|pid:none) Acinetobacter baumannii ATCC 179... 121 7e-26
AE015929_1367(AE015929|pid:none) Staphylococcus epidermidis ATCC... 120 8e-26
CP001390_1390(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 120 8e-26
CP001096_5129(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 120 8e-26
CP000738_3342(CP000738|pid:none) Sinorhizobium medicae WSM419, c... 120 8e-26
>DQ630550_1(DQ630550|pid:none) Danio rerio DNA polymerase nu (POLN)
mRNA, complete cds.
Length = 1146
Score = 158 bits (399), Expect = 5e-37
Identities = 94/245 (38%), Positives = 141/245 (57%), Gaps = 7/245 (2%)
Frame = +1
Query: 577 LSADYSQLELRILTHYSKDPNLIEMFNYSRELDVFKCIAHQLSGVDYEKVSDEERNFAKH 756
LSAD+ Q+ELR+L H S DP L+ +F S E D F +A Q GV ++VS E+R AK
Sbjct: 899 LSADFCQVELRLLAHLSADPQLLRIFQ-SPEADAFTMLAAQWKGVSEDRVSLEDREQAKR 957
Query: 757 LVYGILYGMGINSIASELKVDKEKAKVQLERFKNTYRTLIDFLESIEDRVFIDAYIKTLF 936
+VY ++YG G ++ L V E+A + F TYR + F++ +++++
Sbjct: 958 IVYSVVYGAGRERLSGILGVSAEEASRFQDSFLKTYREVPAFIQHTIQHCQSHGFVRSIM 1017
Query: 937 GRIRNFSAIHDPKTLPKDIGKIKRGARNSVPQGTAADITKLAMINIQSQFDQLSINVHMV 1116
GR R IH ++ + +R A N V QG+AAD+ KLAMI I SQ S +V
Sbjct: 1018 GRRRFLPHIHSADWSLRN--QAERQAVNFVLQGSAADLAKLAMIRICSQVSSDSQTARLV 1075
Query: 1117 LQLHDELLFEVPLTDIDQSAKIIKESMENV-------VKLNVPLPIKMSIGTNWGSLESF 1275
Q+HDELLFEV ++ +DQ A ++K++ME++ V L+VPL + +S G +WGS+
Sbjct: 1076 AQIHDELLFEVEISQLDQFAALVKKTMESLQHIEYLNVNLSVPLKVLLSTGRSWGSMYEM 1135
Query: 1276 NFNFT 1290
N + T
Sbjct: 1136 NLSCT 1140
Lambda K H
0.317 0.135 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,205,542,254
Number of extensions: 23756749
Number of successful extensions: 56287
Number of sequences better than 10.0: 739
Number of HSP's gapped: 54847
Number of HSP's successfully gapped: 749
Length of query: 447
Length of database: 1,040,966,779
Length adjustment: 132
Effective length of query: 315
Effective length of database: 618,001,159
Effective search space: 194670365085
Effective search space used: 194670365085
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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