Contig-U11114-1
Contig ID Contig-U11114-1
Contig update 2002.12.18
Contig sequence
>Contig-U11114-1 (Contig-U11114-1Q) /CSM_Contig/Contig-U11114-1Q.Seq.d
ATTTTTTTTTTTTATTTTTTATTTAATTTTATCACAAAGGTCCATTTTAA
AAATGGGTTTAGCAGGAGATTCACCATATGATTTTGGAGAAATTAAACCA
GATGATTTAGATAAATCAATTACAAAATTTCAAAATATTTTATCAAATTG
TATTAAAGATTTAGAAACTGATGGAGAAGAAATAATAAAATTAGTGAAAA
CATTAATTTTAACTCAATCACCAGGTGAAAGAACTACAGAATTCATAGAG
GAATATTTGAAAAAGATTAGCAATCTAAGTAATACGGAAGCATTGAATGT
ATCAAGAGTGTTATCACATCTATTGAATTTAATTAATGTTGCAGAACAAC
ATCATTTGGTTAGATCAGTTAGAGAATCATTCCTCAACAATGAAGATGAT
TTAAAGTATTCATGTGAGAATACCATTCAACAATTATTAAATCAAGGTCT
TGACAAGGAGAGTGTTTACAATGCATTAATTCAACAAAAGATCGAACTTG
TTTTAACGGCACATCCAACACAAATTATGAGACGTACTATAATTTCCAAG
AATTCGGCAATGGGTGAAGCATTATCGTCATTGGATAATCAGCAATTGAC
AATGTTTGAACGTGAAGATTATGAAAAGAGATTGATTAGAGAAGTTGGTG
GATCATGGTTAACCGATGAAGTTAGAAGATCAAAAGTTACTGTTGAAATG
GAGGC----------GATTTATGTCATGTTGGGAGTTATTTAAAGCTCAA
GAGAGATTAGCATCATTAACAGAGAAATTCAATGTGAAATTAACTTTATT
CCATGGTAGAGGTGGTACAGCTGCAAGAGGTGGTGGTAATTCACATGAGG
GTATTATGTCACAACCTGGTGGTTCATTGAAATCAGCTTCCACCAGAGTT
ACAATTCAAGGTGAAATGATTGATTCTCATTATGGTCAAATTGGTGCATC
CATTAGAAATTTCGAACTTTTCACAACTGCTCTCTTAAAGCAATCCCTAA
CTCCACCTCCTCCACCAAAGCAACGTTGGAGAGAAATTATGGAGCAACTT
TCCATCACCTCTTGTAAAAAGTATAGATCAGTCGTAAGAGAGAATCCATC
ATTCATTCAATACTTTAGAACTTCAACCAGTCCAACCTGAAATGGTCTAC
CTTAACATTGGTTCTCGTCCTGCCAAAAGAATAGCCGCAAAATCATTTGG
ATTGGAACATTTACGTGCTATTCCTTGGGTATTCAGTTTTTCACAAAATA
GATTAAATTTACCAGTTTGGTTAGGTATTGAAGATGCAATTTTAGAGGCA
AAAACAAAAGGATGGGGATCTGATATCAATGAAATGTACAAAGAATGGCC
ATTCTTTTCATCCACTATTGATTTGGTAGAGATGGTACTCTTGAAAACTG
ATCCTCAAATTTCATTACGTTACAATCAAATGTTAGTACCAGCTCAAGTT
CAACCTTTAGGTATTGAAATGATTGATGAACTCACAAAAACTACAAATGC
AATCTTGGAATTAACAAAACATAAAACTCTTCAACAAGATAATAAAATCC
TTCAACATTTTGTTTCAATTCGTAGAACCTTTATGGATCCAATCAATTAT
ATTCAAGTTGAAACCCTTAAAAGACTTCGTTCAACTCAAAAACCAGATGG
AACAAATGATGATGCTGATCCAATATTAATTGATACTTTAATTATTACTT
TTAATGGTATTTCTGCTGGTATGAAAAATACTGGTTAAATTATAATTATA
AAATTTTAATAATCAATTAATTAATAATAATAAAAATAATAATAATAAAA
ATAATAATAATAGTTCTCCATTATTTCAAAGATGCGAAAAATAAATAAAT
TAAAAATTTAAAATA

Gap gap included
Contig length 1855
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 601656
End point 599801
Strand (PLUS/MINUS) MINUS
Number of clones 61
Number of EST 106
Link to clone list U11114
List of clone(s)

est1=VHK880F,1,510
est2=CHP301F,4,612
est3=AHA505F,14,633
est4=AHB750F,14,633
est5=AHC471F,14,551
est6=AHD404F,14,608
est7=AHI617F,14,676
est8=AHK354F,14,635
est9=CHL774F,14,588
est10=CHO725F,14,506
est11=SHL264F,14,617
est12=VHB884F,14,638
est13=VHF393F,14,549
est14=AHD385F,15,635
est15=AHO848F,15,635
est16=SHB261F,16,629
est17=AHF509F,19,631
est18=AHB443F,20,635
est19=AHA365F,21,634
est20=AHC668F,21,617
est21=AHF680F,21,633
est22=AHG753F,21,543
est23=AHH188F,21,635
est24=AHI865F,21,676
est25=AHP833F,21,620
est26=SHE451F,21,632
est27=VHI841F,21,635
est28=VHK335F,21,632
est29=VHP303F,21,632
est30=SHF584F,22,658
est31=AHK696F,25,584
est32=CHF129F,25,438
est33=VHE718F,25,640
est34=VHK432F,25,702
est35=AHC485F,31,631
est36=AHJ570F,31,630
est37=VHJ177F,31,513
est38=VHB327F,34,675
est39=AHN475F,35,617
est40=AHH115F,40,550
est41=VHI520F,43,701
est42=VHO730F,43,705
est43=AHQ519F,44,676
est44=VHL105F,44,675
est45=AHH561F,45,542
est46=VHO704F,45,675
est47=AHD621F,49,675
est48=SHF259F,49,674
est49=VHJ139F,49,679
est50=AHP566F,120,270
est51=VHP316F,132,702
est52=AHP633F,378,552
est53=SLE769F,706,1345
est54=VHI520Z,999,1716
est55=VHP752Z,1002,1689
est56=SHL264Z,1050,1721
est57=AHF196Z,1056,1812
est58=AHI865Z,1058,1835
est59=AHD621Z,1059,1795
est60=SHB261Z,1059,1847
est61=VHB884Z,1059,1851
est62=VHL105Z,1059,1721
est63=VHO730Z,1135,1776
est64=VHJ139Z,1136,1758
est65=CHL774Z,1137,1817
est66=VHI841Z,1137,1851
est67=AHC668Z,1138,1823
est68=AHF680Z,1138,1822
est69=AHH561Z,1138,1847
est70=AHI617Z,1138,1853
est71=VHB615Z,1138,1823
est72=AHC485Z,1139,1854
est73=AHF509Z,1139,1854
est74=AHK696Z,1139,1853
est75=AHH188Z,1140,1853
est76=VHB327Z,1140,1853
est77=VHK432Z,1140,1829
est78=SHE451Z,1141,1759
est79=AHC471Z,1142,1854
est80=VHK335Z,1142,1851
est81=AHA365Z,1143,1796
est82=AHB443Z,1143,1824
est83=AHJ570Z,1143,1852
est84=AHK354Z,1143,1854
est85=AHO648Z,1143,1854
est86=SHF584Z,1144,1820
est87=AHQ519Z,1148,1841
est88=VHB175Z,1159,1854
est89=SHF259Z,1161,1849
est90=AHD404Z,1163,1847
est91=VHO704Z,1163,1837
est92=CHP301Z,1175,1806
est93=VHJ177Z,1180,1851
est94=VHK880Z,1180,1848
est95=AHN475Z,1181,1821
est96=CHF129Z,1191,1854
est97=VHP316Z,1196,1820
est98=AHP633Z,1219,1847
est99=VHP303Z,1244,1818
est100=AHG753Z,1270,1853
est101=VHH214Z,1290,1791
est102=CHO725Z,1333,1659
est103=VSH492Z,1339,1832
est104=AHQ776Z,1479,1695
est105=VHE718Z,1526,1819
est106=AHB750Z,1724,1857
Translated Amino Acid sequence
FFFFIFYLILSQRSILKMGLAGDSPYDFGEIKPDDLDKSITKFQNILSNCIKDLETDGEE
IIKLVKTLILTQSPGERTTEFIEEYLKKISNLSNTEALNVSRVLSHLLNLINVAEQHHLV
RSVRESFLNNEDDLKYSCENTIQQLLNQGLDKESVYNALIQQKIELVLTAHPTQIMRRTI
ISKNSAMGEALSSLDNQQLTMFEREDYEKRLIREVGGSWLTDEVRRSKVTVEME---

---FMSCWELFKAQERLASLTEKFNVKLTLFHGRGGTAARGGGNSHEGIMSQPGGSLKSA
STRVTIQGEMIDSHYGQIGASIRNFELFTTALLKQSLTPPPPPKQRWREIMEQLSITSCK
KYRSVVRENPSFIQYFRTSTSPT*nglp*hwfsscqknsrkiiwigtftcyslgiqfftk
*ikftslvry*rcnfrgknkrmgi*yq*nvqrmailfihy*fgrdgtlen*ssnfitlqs
nvstsssstfry*nd**thknykcnlginkt*nsstr**npstfcfns*nlygsnqlyss
*np*ktsfnsktrwnk**c*snin*yfnyyf*wyfcwyekywlnynykiliin*liiiki
iiikiiiivlhyfkdaknk*iknlk


Translated Amino Acid sequence (All Frames)
Frame A:
ifffyflfnfitkvhfkngfsrrfti*fwrn*tr*fr*inykiskyfikly*rfrn*wrr
nnkiseninfnsitr*knyrihrgifekd*qsk*ygsieciksvitsiefn*ccrttsfg
*is*riipqq*r*fkvfm*eyhstiiksrs*qgeclqcinstkdrtcfngtsntnyetyy
nfqefgng*siivig*saidnv*t*rl*keid*rswwimvnr*s*kiksyc*ngg---

---dlchvgsylklkrd*hh*qrnsm*n*lysmvevvqlqevvvihmrvlchnlvvh*nq
lppelqfkvk*lilimvklvhpleisnfsqlls*snp*lhllhqsnvgeklwsnfpsplv
ksidqs*erihhsfntlelqpvqpemvylnigsrpakriaaksfglehlraipwvfsfsq
nrlnlpvwlgiedaileaktkgwgsdinemykewpffsstidlvemvllktdpqislryn
qmlvpaqvqplgiemideltkttnaileltkhktlqqdnkilqhfvsirrtfmdpinyiq
vetlkrlrstqkpdgtnddadpilidtliitfngisagmkntg*iiiikf**sin****k
****k****fsiiskmrkinklki*n

Frame B:
FFFFIFYLILSQRSILKMGLAGDSPYDFGEIKPDDLDKSITKFQNILSNCIKDLETDGEE
IIKLVKTLILTQSPGERTTEFIEEYLKKISNLSNTEALNVSRVLSHLLNLINVAEQHHLV
RSVRESFLNNEDDLKYSCENTIQQLLNQGLDKESVYNALIQQKIELVLTAHPTQIMRRTI
ISKNSAMGEALSSLDNQQLTMFEREDYEKRLIREVGGSWLTDEVRRSKVTVEME---

---iyvmlgvi*ssreisiinreiqceinfipw*rwysckrww*ft*gyyvttwwfieis
fhqsynsr*nd*fslwsnwcih*kfrtfhncslkaipnstsstkatlernygatfhhll*
kv*isrkresiihsil*nfnqsnlkwstltlvlvlpke*pqnhldwniyvlflgysvfhk
id*iyqfg*vlkmqf*rqkqkdgdlismkctknghsfhplliw*rwys*klilkfhyvti
kc*yqlkfnl*vlk*lmnsqklqmqswn*qniklfnkiiksfnilfqfveplwiqsiifk
lkplkdfvqlknqmeqmmmliqy*lil*llllmvfllv*kilvkl*l*nfnnqlinnnkn
nnnknnnnssplfqrcek*in*kfki

Frame C:
ffflffi*fyhkgpf*kwv*qeihhmileklnqmi*inqlqnfkifyqivlki*klmekk
**n**kh*f*lnhqvkelqns*rni*krlai*virkh*myqecyhiy*i*lmlqnniiwl
dqlenhsstmkmi*sihvripfnny*ikvltrrvftmh*fnkrsnlf*rhiqhkl*dvl*
fprirqwvkhyrhwiisn*qclnvkimkrd*leklvdhg*pmkledqklllkwr---

---FMSCWELFKAQERLASLTEKFNVKLTLFHGRGGTAARGGGNSHEGIMSQPGGSLKSA
STRVTIQGEMIDSHYGQIGASIRNFELFTTALLKQSLTPPPPPKQRWREIMEQLSITSCK
KYRSVVRENPSFIQYFRTSTSPT*nglp*hwfsscqknsrkiiwigtftcyslgiqfftk
*ikftslvry*rcnfrgknkrmgi*yq*nvqrmailfihy*fgrdgtlen*ssnfitlqs
nvstsssstfry*nd**thknykcnlginkt*nsstr**npstfcfns*nlygsnqlyss
*np*ktsfnsktrwnk**c*snin*yfnyyf*wyfcwyekywlnynykiliin*liiiki
iiikiiiivlhyfkdaknk*iknlk

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U11114-1 (Contig-U11114-1Q)
/CSM_Contig/Contig-U11114-1Q.Seq.d
(1865 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U11114-1 (Contig-U11114-1Q) /CSM_Contig/Conti... 3314 0.0
Contig-U13634-1 (Contig-U13634-1Q) /CSM_Contig/Conti... 278 2e-74
Contig-U11384-1 (Contig-U11384-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U13721-1 (Contig-U13721-1Q) /CSM_Contig/Conti... 40 0.008
Contig-U05732-1 (Contig-U05732-1Q) /CSM_Contig/Conti... 40 0.008
Contig-U13328-1 (Contig-U13328-1Q) /CSM_Contig/Conti... 38 0.034
Contig-U11602-1 (Contig-U11602-1Q) /CSM_Contig/Conti... 38 0.034
Contig-U11444-1 (Contig-U11444-1Q) /CSM_Contig/Conti... 38 0.034
Contig-U11382-1 (Contig-U11382-1Q) /CSM_Contig/Conti... 38 0.034
Contig-U01212-1 (Contig-U01212-1Q) /CSM_Contig/Conti... 38 0.034

>Contig-U11114-1 (Contig-U11114-1Q) /CSM_Contig/Contig-U11114-1Q.Seq.d
Length = 1865

Score = 3314 bits (1672), Expect = 0.0
Identities = 1702/1702 (100%)
Strand = Plus / Plus


Query: 21 atttaattttatcacaaaggtccattttaaaaatgggtttagcaggagattcaccatatg 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 atttaattttatcacaaaggtccattttaaaaatgggtttagcaggagattcaccatatg 80


Query: 81 attttggagaaattaaaccagatgatttagataaatcaattacaaaatttcaaaatattt 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 attttggagaaattaaaccagatgatttagataaatcaattacaaaatttcaaaatattt 140


Query: 141 tatcaaattgtattaaagatttagaaactgatggagaagaaataataaaattagtgaaaa 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 tatcaaattgtattaaagatttagaaactgatggagaagaaataataaaattagtgaaaa 200


Query: 201 cattaattttaactcaatcaccaggtgaaagaactacagaattcatagaggaatatttga 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattaattttaactcaatcaccaggtgaaagaactacagaattcatagaggaatatttga 260


Query: 261 aaaagattagcaatctaagtaatacggaagcattgaatgtatcaagagtgttatcacatc 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaagattagcaatctaagtaatacggaagcattgaatgtatcaagagtgttatcacatc 320


Query: 321 tattgaatttaattaatgttgcagaacaacatcatttggttagatcagttagagaatcat 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattgaatttaattaatgttgcagaacaacatcatttggttagatcagttagagaatcat 380


Query: 381 tcctcaacaatgaagatgatttaaagtattcatgtgagaataccattcaacaattattaa 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctcaacaatgaagatgatttaaagtattcatgtgagaataccattcaacaattattaa 440


Query: 441 atcaaggtcttgacaaggagagtgtttacaatgcattaattcaacaaaagatcgaacttg 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcaaggtcttgacaaggagagtgtttacaatgcattaattcaacaaaagatcgaacttg 500


Query: 501 ttttaacggcacatccaacacaaattatgagacgtactataatttccaagaattcggcaa 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttaacggcacatccaacacaaattatgagacgtactataatttccaagaattcggcaa 560


Query: 561 tgggtgaagcattatcgtcattggataatcagcaattgacaatgtttgaacgtgaagatt 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgggtgaagcattatcgtcattggataatcagcaattgacaatgtttgaacgtgaagatt 620


Query: 621 atgaaaagagattgattagagaagttggtggatcatggttaaccgatgaagttagaagat 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgaaaagagattgattagagaagttggtggatcatggttaaccgatgaagttagaagat 680


Query: 681 caaaagttactgttgaaatggaggcnnnnnnnnnngatttatgtcatgttgggagttatt 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caaaagttactgttgaaatggaggcnnnnnnnnnngatttatgtcatgttgggagttatt 740


Query: 741 taaagctcaagagagattagcatcattaacagagaaattcaatgtgaaattaactttatt 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taaagctcaagagagattagcatcattaacagagaaattcaatgtgaaattaactttatt 800


Query: 801 ccatggtagaggtggtacagctgcaagaggtggtggtaattcacatgagggtattatgtc 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ccatggtagaggtggtacagctgcaagaggtggtggtaattcacatgagggtattatgtc 860


Query: 861 acaacctggtggttcattgaaatcagcttccaccagagttacaattcaaggtgaaatgat 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 acaacctggtggttcattgaaatcagcttccaccagagttacaattcaaggtgaaatgat 920


Query: 921 tgattctcattatggtcaaattggtgcatccattagaaatttcgaacttttcacaactgc 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 tgattctcattatggtcaaattggtgcatccattagaaatttcgaacttttcacaactgc 980


Query: 981 tctcttaaagcaatccctaactccacctcctccaccaaagcaacgttggagagaaattat 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 tctcttaaagcaatccctaactccacctcctccaccaaagcaacgttggagagaaattat 1040


Query: 1041 ggagcaactttccatcacctcttgtaaaaagtatagatcagtcgtaagagagaatccatc 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 ggagcaactttccatcacctcttgtaaaaagtatagatcagtcgtaagagagaatccatc 1100


Query: 1101 attcattcaatactttagaacttcaaccagtccaacctgaaatggtctaccttaacattg 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1101 attcattcaatactttagaacttcaaccagtccaacctgaaatggtctaccttaacattg 1160


Query: 1161 gttctcgtcctgccaaaagaatagccgcaaaatcatttggattggaacatttacgtgcta 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1161 gttctcgtcctgccaaaagaatagccgcaaaatcatttggattggaacatttacgtgcta 1220


Query: 1221 ttccttgggtattcagtttttcacaaaatagattaaatttaccagtttggttaggtattg 1280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1221 ttccttgggtattcagtttttcacaaaatagattaaatttaccagtttggttaggtattg 1280


Query: 1281 aagatgcaattttagaggcaaaaacaaaaggatggggatctgatatcaatgaaatgtaca 1340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1281 aagatgcaattttagaggcaaaaacaaaaggatggggatctgatatcaatgaaatgtaca 1340


Query: 1341 aagaatggccattcttttcatccactattgatttggtagagatggtactcttgaaaactg 1400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1341 aagaatggccattcttttcatccactattgatttggtagagatggtactcttgaaaactg 1400


Query: 1401 atcctcaaatttcattacgttacaatcaaatgttagtaccagctcaagttcaacctttag 1460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1401 atcctcaaatttcattacgttacaatcaaatgttagtaccagctcaagttcaacctttag 1460


Query: 1461 gtattgaaatgattgatgaactcacaaaaactacaaatgcaatcttggaattaacaaaac 1520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1461 gtattgaaatgattgatgaactcacaaaaactacaaatgcaatcttggaattaacaaaac 1520


Query: 1521 ataaaactcttcaacaagataataaaatccttcaacattttgtttcaattcgtagaacct 1580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1521 ataaaactcttcaacaagataataaaatccttcaacattttgtttcaattcgtagaacct 1580


Query: 1581 ttatggatccaatcaattatattcaagttgaaacccttaaaagacttcgttcaactcaaa 1640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1581 ttatggatccaatcaattatattcaagttgaaacccttaaaagacttcgttcaactcaaa 1640


Query: 1641 aaccagatggaacaaatgatgatgctgatccaatattaattgatactttaattattactt 1700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1641 aaccagatggaacaaatgatgatgctgatccaatattaattgatactttaattattactt 1700


Query: 1701 ttaatggtatttctgctggtat 1722
||||||||||||||||||||||
Sbjct: 1701 ttaatggtatttctgctggtat 1722


Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus


Query: 1813 gttctccattatttcaaagatgcg 1836
||||||||||||||||||||||||
Sbjct: 1813 gttctccattatttcaaagatgcg 1836


Score = 36.2 bits (18), Expect = 0.13
Identities = 18/18 (100%)
Strand = Plus / Minus


Query: 1340 aaagaatggccattcttt 1357
||||||||||||||||||
Sbjct: 1357 aaagaatggccattcttt 1340


>Contig-U13634-1 (Contig-U13634-1Q) /CSM_Contig/Contig-U13634-1Q.Seq.d
Length = 602

Score = 278 bits (140), Expect = 2e-74
Identities = 142/143 (99%)
Strand = Plus / Plus


Query: 1579 ctttatggatccaatcaattatattcaagttgaaacccttaaaagacttcgttcaactca 1638
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 402 ctttatggatccaatcaattatattcaagttgaaaccnttaaaagacttcgttcaactca 461


Query: 1639 aaaaccagatggaacaaatgatgatgctgatccaatattaattgatactttaattattac 1698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aaaaccagatggaacaaatgatgatgctgatccaatattaattgatactttaattattac 521


Query: 1699 ttttaatggtatttctgctggta 1721
|||||||||||||||||||||||
Sbjct: 522 ttttaatggtatttctgctggta 544


Score = 153 bits (77), Expect = 8e-37
Identities = 84/85 (98%), Gaps = 1/85 (1%)
Strand = Plus / Plus


Query: 716 gatttatgtcatgttgggagttatttaaagctcaagag-agattagcatcattaacagag 774
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 323 gatttatgtcatgttgggagttatttaaagctcaagaggagattagcatcattaacagag 382


Query: 775 aaattcaatgtgaaattaactttat 799
|||||||||||||||||||||||||
Sbjct: 383 aaattcaatgtgaaattaactttat 407


>Contig-U11384-1 (Contig-U11384-1Q) /CSM_Contig/Contig-U11384-1Q.Seq.d
Length = 1424

Score = 42.1 bits (21), Expect = 0.002
Identities = 30/33 (90%)
Strand = Plus / Plus


Query: 96 aaccagatgatttagataaatcaattacaaaat 128
|||||||| |||| | |||||||||||||||||
Sbjct: 69 aaccagataatttggttaaatcaattacaaaat 101


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 24,476
Number of Sequences: 6905
Number of extensions: 24476
Number of successful extensions: 2416
Number of sequences better than 10.0: 207
length of query: 1865
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1849
effective length of database: 5,564,391
effective search space: 10288558959
effective search space used: 10288558959
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.22
Homology vs DNA
Query= Contig-U11114-1 (Contig-U11114-1Q) /CSM_Contig/Contig-U11114-1Q.Seq.d
(1865 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ424127) Dictyostelium discoideum cDNA clone:ddv51p08, 5' ... 1330 0.0 1
(BJ423105) Dictyostelium discoideum cDNA clone:ddv48g05, 5' ... 1302 0.0 1
(BJ408713) Dictyostelium discoideum cDNA clone:dds46o16, 3' ... 1302 0.0 1
(BJ437625) Dictyostelium discoideum cDNA clone:ddv34h22, 3' ... 1298 0.0 1
(BJ426832) Dictyostelium discoideum cDNA clone:ddv60l07, 5' ... 1298 0.0 1
(BJ349930) Dictyostelium discoideum cDNA clone:dda38i06, 3' ... 1298 0.0 1
(BJ352960) Dictyostelium discoideum cDNA clone:dda48b18, 3' ... 1294 0.0 1
(BJ334837) Dictyostelium discoideum cDNA clone:dda48a06, 5' ... 1277 0.0 1
(BJ334982) Dictyostelium discoideum cDNA clone:dda48b18, 5' ... 1269 0.0 1
(BJ426739) Dictyostelium discoideum cDNA clone:ddv60h01, 5' ... 1251 0.0 1
(BJ423502) Dictyostelium discoideum cDNA clone:ddv49m09, 5' ... 1251 0.0 1
(BJ339080) Dictyostelium discoideum cDNA clone:dda64e05, 5' ... 1247 0.0 1
(BJ424644) Dictyostelium discoideum cDNA clone:ddv53i01, 5' ... 1245 0.0 1
(BJ394291) Dictyostelium discoideum cDNA clone:dds34e16, 5' ... 1241 0.0 1
(BJ332142) Dictyostelium discoideum cDNA clone:dda38i06, 5' ... 1241 0.0 1
(BJ394606) Dictyostelium discoideum cDNA clone:dds35g21, 5' ... 1235 0.0 1
(BJ420661) Dictyostelium discoideum cDNA clone:ddv40d05, 5' ... 1207 0.0 1
(BJ335813) Dictyostelium discoideum cDNA clone:dda51l13, 5' ... 1195 0.0 1
(BJ334329) Dictyostelium discoideum cDNA clone:dda45o21, 5' ... 1195 0.0 1
(BJ332004) Dictyostelium discoideum cDNA clone:dda37j21, 5' ... 1195 0.0 1
(BJ330422) Dictyostelium discoideum cDNA clone:dda31b17, 5' ... 1193 0.0 1
(BJ427033) Dictyostelium discoideum cDNA clone:ddv61f01, 5' ... 1191 0.0 1
(BJ424077) Dictyostelium discoideum cDNA clone:ddv51f09, 5' ... 1191 0.0 1
(BJ393770) Dictyostelium discoideum cDNA clone:dds32f14, 5' ... 1191 0.0 1
(BJ333494) Dictyostelium discoideum cDNA clone:dda42o20, 5' ... 1191 0.0 1
(BJ330592) Dictyostelium discoideum cDNA clone:dda32i01, 5' ... 1191 0.0 1
(BJ423159) Dictyostelium discoideum cDNA clone:ddv48b12, 5' ... 1189 0.0 1
(BJ338199) Dictyostelium discoideum cDNA clone:dda60p12, 5' ... 1187 0.0 1
(BJ333245) Dictyostelium discoideum cDNA clone:dda42a03, 5' ... 1187 0.0 1
(BJ331247) Dictyostelium discoideum cDNA clone:dda34d13, 5' ... 1185 0.0 1
(BJ331555) Dictyostelium discoideum cDNA clone:dda35j22, 5' ... 1183 0.0 1
(BJ351074) Dictyostelium discoideum cDNA clone:dda41o23, 3' ... 1181 0.0 2
(BJ335545) Dictyostelium discoideum cDNA clone:dda50k17, 5' ... 1181 0.0 1
(BJ403883) Dictyostelium discoideum cDNA clone:dds26i16, 3' ... 1168 0.0 2
(BJ397546) Dictyostelium discoideum cDNA clone:dds46o16, 5' ... 1162 0.0 1
(BJ331669) Dictyostelium discoideum cDNA clone:dda36g18, 5' ... 1146 0.0 1
(BJ382755) Dictyostelium discoideum cDNA clone:ddc45d19, 3' ... 1144 0.0 1
(BJ445711) Dictyostelium discoideum cDNA clone:ddv60l07, 3' ... 1142 0.0 1
(BJ441917) Dictyostelium discoideum cDNA clone:ddv48b12, 3' ... 1142 0.0 1
(BJ437408) Dictyostelium discoideum cDNA clone:ddv34m04, 3' ... 1142 0.0 1
(BJ352810) Dictyostelium discoideum cDNA clone:dda48a06, 3' ... 1142 0.0 1
(BJ352394) Dictyostelium discoideum cDNA clone:dda46i15, 3' ... 1142 0.0 1
(BJ332069) Dictyostelium discoideum cDNA clone:dda37h02, 5' ... 1142 0.0 1
(BJ354226) Dictyostelium discoideum cDNA clone:dda52o24, 3' ... 1140 0.0 1
(BJ351079) Dictyostelium discoideum cDNA clone:dda42a03, 3' ... 1140 0.0 1
(BJ349248) Dictyostelium discoideum cDNA clone:dda35j22, 3' ... 1140 0.0 1
(BJ442956) Dictyostelium discoideum cDNA clone:ddv51p08, 3' ... 1136 0.0 1
(BJ337534) Dictyostelium discoideum cDNA clone:dda57f20, 5' ... 1136 0.0 1
(BJ446395) Dictyostelium discoideum cDNA clone:ddv62h13, 3' ... 1134 0.0 2
(BJ351371) Dictyostelium discoideum cDNA clone:dda42o20, 3' ... 1134 0.0 1
(BJ349191) Dictyostelium discoideum cDNA clone:dda35n18, 3' ... 1134 0.0 1
(BJ442904) Dictyostelium discoideum cDNA clone:ddv51f09, 3' ... 1132 0.0 1
(BJ442288) Dictyostelium discoideum cDNA clone:ddv49m09, 3' ... 1132 0.0 1
(BJ356484) Dictyostelium discoideum cDNA clone:dda60o12, 3' ... 1132 0.0 1
(BJ353852) Dictyostelium discoideum cDNA clone:dda51l13, 3' ... 1132 0.0 1
(BJ353559) Dictyostelium discoideum cDNA clone:dda50k17, 3' ... 1132 0.0 1
(BJ348463) Dictyostelium discoideum cDNA clone:dda33f12, 3' ... 1132 0.0 1
(BJ347887) Dictyostelium discoideum cDNA clone:dda31b17, 3' ... 1132 0.0 1
(BJ352188) Dictyostelium discoideum cDNA clone:dda45o21, 3' ... 1130 0.0 1
(BJ349467) Dictyostelium discoideum cDNA clone:dda36g18, 3' ... 1126 0.0 1
(BJ427081) Dictyostelium discoideum cDNA clone:ddv61p03, 5' ... 1124 0.0 1
(BJ406600) Dictyostelium discoideum cDNA clone:dds35g21, 3' ... 1124 0.0 1
(BJ437132) Dictyostelium discoideum cDNA clone:ddv33f07, 3' ... 1122 0.0 1
(BJ357595) Dictyostelium discoideum cDNA clone:dda64e05, 3' ... 1122 0.0 1
(BJ338608) Dictyostelium discoideum cDNA clone:dda62b10, 5' ... 1120 0.0 1
(BJ392158) Dictyostelium discoideum cDNA clone:dds26i16, 5' ... 1112 0.0 2
(BJ336163) Dictyostelium discoideum cDNA clone:dda52o24, 5' ... 1094 0.0 1
(BJ437289) Dictyostelium discoideum cDNA clone:ddv33e19, 3' ... 1092 0.0 1
(BJ349618) Dictyostelium discoideum cDNA clone:dda37h02, 3' ... 1092 0.0 1
(BJ445621) Dictyostelium discoideum cDNA clone:ddv60h01, 3' ... 1090 0.0 1
(BJ406218) Dictyostelium discoideum cDNA clone:dds34e16, 3' ... 1090 0.0 1
(BJ368215) Dictyostelium discoideum cDNA clone:ddc45d19, 5' ... 1080 0.0 1
(BJ330944) Dictyostelium discoideum cDNA clone:dda33f12, 5' ... 1063 0.0 2
(BJ441855) Dictyostelium discoideum cDNA clone:ddv48g05, 3' ... 1059 0.0 3
(BJ443453) Dictyostelium discoideum cDNA clone:ddv52p20, 3' ... 1057 0.0 1
(BJ442429) Dictyostelium discoideum cDNA clone:ddv49i19, 3' ... 1057 0.0 1
(BJ355657) Dictyostelium discoideum cDNA clone:dda57f20, 3' ... 1057 0.0 1
(BJ443496) Dictyostelium discoideum cDNA clone:ddv53i01, 3' ... 1045 0.0 4
(BJ378633) Dictyostelium discoideum cDNA clone:ddc32i07, 3' ... 1037 0.0 1
(BJ421148) Dictyostelium discoideum cDNA clone:ddv41j23, 5' ... 1027 0.0 1
(BJ331512) Dictyostelium discoideum cDNA clone:dda35n18, 5' ... 1023 0.0 1
(BJ370059) Dictyostelium discoideum cDNA clone:ddc52b01, 5' ... 993 0.0 3
(BJ419040) Dictyostelium discoideum cDNA clone:ddv34h22, 5' ... 952 0.0 2
(BJ405683) Dictyostelium discoideum cDNA clone:dds32f14, 3' ... 890 0.0 2
(BJ418584) Dictyostelium discoideum cDNA clone:ddv33f07, 5' ... 823 0.0 2
(AU061598) Dictyostelium discoideum slug cDNA, clone SLE769. 815 0.0 2
(BJ333955) Dictyostelium discoideum cDNA clone:dda44j13, 5' ... 1013 0.0 1
(BJ334111) Dictyostelium discoideum cDNA clone:dda45m03, 5' ... 999 0.0 1
(BJ383139) Dictyostelium discoideum cDNA clone:ddc52b01, 3' ... 858 0.0 4
(BJ357033) Dictyostelium discoideum cDNA clone:dda62a10, 3' ... 981 0.0 1
(BJ334487) Dictyostelium discoideum cDNA clone:dda46i15, 5' ... 965 0.0 1
(BJ369636) Dictyostelium discoideum cDNA clone:ddc51b07, 5' ... 940 0.0 1
(BJ445919) Dictyostelium discoideum cDNA clone:ddv61f01, 3' ... 930 0.0 1
(BJ423622) Dictyostelium discoideum cDNA clone:ddv49i19, 5' ... 930 0.0 1
(BJ445966) Dictyostelium discoideum cDNA clone:ddv61p03, 3' ... 517 0.0 2
(BJ351792) Dictyostelium discoideum cDNA clone:dda44j13, 3' ... 866 0.0 1
(BJ440925) Dictyostelium discoideum cDNA clone:ddv45k04, 3' ... 835 0.0 1
(BJ364619) Dictyostelium discoideum cDNA clone:ddc32i07, 5' ... 793 0.0 1
(AU267535) Dictyostelium discoideum vegetative cDNA clone:VS... 743 0.0 1
(BJ424597) Dictyostelium discoideum cDNA clone:ddv52p20, 5' ... 692 0.0 1

>(BJ424127) Dictyostelium discoideum cDNA clone:ddv51p08, 5' end,
single read.
Length = 678

Score = 1330 bits (671), Expect = 0.0
Identities = 671/671 (100%)
Strand = Plus / Plus


Query: 32 tcacaaaggtccattttaaaaatgggtttagcaggagattcaccatatgattttggagaa 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 tcacaaaggtccattttaaaaatgggtttagcaggagattcaccatatgattttggagaa 67


Query: 92 attaaaccagatgatttagataaatcaattacaaaatttcaaaatattttatcaaattgt 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 attaaaccagatgatttagataaatcaattacaaaatttcaaaatattttatcaaattgt 127


Query: 152 attaaagatttagaaactgatggagaagaaataataaaattagtgaaaacattaatttta 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 attaaagatttagaaactgatggagaagaaataataaaattagtgaaaacattaatttta 187


Query: 212 actcaatcaccaggtgaaagaactacagaattcatagaggaatatttgaaaaagattagc 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 actcaatcaccaggtgaaagaactacagaattcatagaggaatatttgaaaaagattagc 247


Query: 272 aatctaagtaatacggaagcattgaatgtatcaagagtgttatcacatctattgaattta 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aatctaagtaatacggaagcattgaatgtatcaagagtgttatcacatctattgaattta 307


Query: 332 attaatgttgcagaacaacatcatttggttagatcagttagagaatcattcctcaacaat 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 attaatgttgcagaacaacatcatttggttagatcagttagagaatcattcctcaacaat 367


Query: 392 gaagatgatttaaagtattcatgtgagaataccattcaacaattattaaatcaaggtctt 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gaagatgatttaaagtattcatgtgagaataccattcaacaattattaaatcaaggtctt 427


Query: 452 gacaaggagagtgtttacaatgcattaattcaacaaaagatcgaacttgttttaacggca 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gacaaggagagtgtttacaatgcattaattcaacaaaagatcgaacttgttttaacggca 487


Query: 512 catccaacacaaattatgagacgtactataatttccaagaattcggcaatgggtgaagca 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 catccaacacaaattatgagacgtactataatttccaagaattcggcaatgggtgaagca 547


Query: 572 ttatcgtcattggataatcagcaattgacaatgtttgaacgtgaagattatgaaaagaga 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ttatcgtcattggataatcagcaattgacaatgtttgaacgtgaagattatgaaaagaga 607


Query: 632 ttgattagagaagttggtggatcatggttaaccgatgaagttagaagatcaaaagttact 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ttgattagagaagttggtggatcatggttaaccgatgaagttagaagatcaaaagttact 667


Query: 692 gttgaaatgga 702
|||||||||||
Sbjct: 668 gttgaaatgga 678

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,074,357,418
Number of extensions: 125069812
Number of successful extensions: 9822193
Number of sequences better than 10.0: 267
Length of query: 1865
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1841
Effective length of database: 97,308,875,965
Effective search space: 179145640651565
Effective search space used: 179145640651565
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.29
Homology vs Protein
Query= Contig-U11114-1 (Contig-U11114-1Q) /CSM_Contig/Contig-U11114-1Q.Seq.d
(1865 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

FB830099_1(FB830099|pid:none) Sequence 49372 from Patent WO20080... 176 5e-71
EF634318_1(EF634318|pid:none) Ricinus communis phosphoenolpyruva... 177 9e-71
AC011914_12(AC011914|pid:none) Arabidopsis thaliana chromosome 1... 173 4e-70
AC008075_1(AC008075|pid:none) Arabidopsis thaliana chromosome 1 ... 173 4e-70
BT070413_1(BT070413|pid:none) Picea sitchensis clone WS02727_O18... 171 4e-68
AM424873_1(AM424873|pid:none) Vitis vinifera contig VV78X088960.... 174 2e-67
AJ231278_1(AJ231278|pid:none) Anthoceros punctatus partial mRNA ... 171 4e-66
CP000544_2259(CP000544|pid:none) Halorhodospira halophila SL1, c... 154 6e-64
CP001600_3707(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 150 3e-63
(A5W881) RecName: Full=Phosphoenolpyruvate carboxylase; ... 152 6e-63
(Q88MR4) RecName: Full=Phosphoenolpyruvate carboxylase; ... 152 6e-63
(B0KS63) RecName: Full=Phosphoenolpyruvate carboxylase; ... 150 8e-63
(B0UUJ3) RecName: Full=Phosphoenolpyruvate carboxylase; ... 146 9e-62
(Q0I371) RecName: Full=Phosphoenolpyruvate carboxylase; ... 146 9e-62
CP000949_4086(CP000949|pid:none) Pseudomonas putida W619, comple... 152 9e-62
AJ231285_1(AJ231285|pid:none) Funaria hygrometrica partial mRNA ... 145 9e-62
AK066635_1(AK066635|pid:none) Oryza sativa Japonica Group cDNA c... 149 3e-61
(P51062) RecName: Full=Phosphoenolpyruvate carboxylase; ... 142 3e-61
(A8GZ16) RecName: Full=Phosphoenolpyruvate carboxylase; ... 146 4e-61
(A8GL86) RecName: Full=Phosphoenolpyruvate carboxylase; ... 142 4e-61
AJ231298_1(AJ231298|pid:none) Rhytidiadelphus squarrosus partial... 142 4e-61
AJ231289_1(AJ231289|pid:none) Lunularia cruciata partial mRNA fo... 149 4e-61
CP001321_334(CP001321|pid:none) Haemophilus parasuis SH0165, com... 143 6e-61
CP001616_92(CP001616|pid:none) Tolumonas auensis DSM 9187, compl... 140 6e-61
AJ231291_1(AJ231291|pid:none) Leptobryum pyriforme partial mRNA ... 148 6e-61
AJ231301_1(AJ231301|pid:none) Sphagnum palustre partial mRNA for... 148 6e-61
AY663387_1(AY663387|pid:none) Lupinus albus phosphoenolpyruvate ... 140 9e-61
AF495586_1(AF495586|pid:none) Setaria italica putative C4 phosph... 147 9e-61
X03613_1(X03613|pid:none) Maize mRNA for phosphoenolpyruvate car... 145 9e-61
AF271161_1(AF271161|pid:none) Hydrilla verticillata phosphoenolp... 148 1e-60
AF271163_1(AF271163|pid:none) Hydrilla verticillata phosphoenolp... 148 1e-60
(Q4QL71) RecName: Full=Phosphoenolpyruvate carboxylase; ... 143 1e-60
(B0TL90) RecName: Full=Phosphoenolpyruvate carboxylase; ... 144 1e-60
AJ293346_1(AJ293346|pid:none) Saccharum officinarum mRNA for put... 145 2e-60
AJ318338_1(AJ318338|pid:none) Saccharum spontaneum mRNA for puta... 144 2e-60
(A1SRH8) RecName: Full=Phosphoenolpyruvate carboxylase; ... 151 2e-60
(Q4KHK5) RecName: Full=Phosphoenolpyruvate carboxylase; ... 150 2e-60
AJ231300_1(AJ231300|pid:none) Scapania nemorea partial mRNA for ... 148 2e-60
AK073703_1(AK073703|pid:none) Oryza sativa Japonica Group cDNA c... 147 3e-60
AJ231279_1(AJ231279|pid:none) Bartramia pomiformis partial mRNA ... 140 3e-60
AP005802_13(AP005802|pid:none) Oryza sativa Japonica Group genom... 143 4e-60
AC125474_6(AC125474|pid:none) Medicago truncatula clone mth2-16l... 141 4e-60
(P81831) RecName: Full=Phosphoenolpyruvate carboxylase 1; ... 148 5e-60
AY187619_1(AY187619|pid:none) Oryza sativa (indica cultivar-grou... 147 5e-60
AY135709_1(AY135709|pid:none) Saccharum hybrid cultivar putative... 144 5e-60
(A9MI14) RecName: Full=Phosphoenolpyruvate carboxylase; ... 139 5e-60
(Q8Z307) RecName: Full=Phosphoenolpyruvate carboxylase; ... 139 5e-60
CP001127_4024(CP001127|pid:none) Salmonella enterica subsp. ente... 139 5e-60
(B5RF49) RecName: Full=Phosphoenolpyruvate carboxylase; ... 139 5e-60
(Q9CN89) RecName: Full=Phosphoenolpyruvate carboxylase; ... 149 5e-60
(A5UCN0) RecName: Full=Phosphoenolpyruvate carboxylase; ... 142 5e-60
(A0KFU8) RecName: Full=Phosphoenolpyruvate carboxylase; ... 139 5e-60
AF271162_1(AF271162|pid:none) Hydrilla verticillata phosphoenolp... 144 6e-60
CP000789_44(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 chro... 145 8e-60
FB830293_1(FB830293|pid:none) Sequence 49566 from Patent WO20080... 142 8e-60
BT084006_1(BT084006|pid:none) Zea mays full-length cDNA clone ZM... 142 8e-60
AJ231281_1(AJ231281|pid:none) Brachythecium salebrosum partial m... 139 1e-59
AY663388_1(AY663388|pid:none) Lupinus albus phosphoenolpyruvate ... 139 1e-59
AB092820_1(AB092820|pid:none) Lotus japonicus LjPEPC1 mRNA for p... 139 1e-59
(A3MZ57) RecName: Full=Phosphoenolpyruvate carboxylase; ... 141 1e-59
(Q8DCN2) RecName: Full=Phosphoenolpyruvate carboxylase; ... 144 1e-59
AJ231286_1(AJ231286|pid:none) Hypnum cupressiforme partial mRNA ... 139 1e-59
X15642_1(X15642|pid:none) Z.mays gene for phosphoenolpyruvate ca... 146 2e-59
FB830101_1(FB830101|pid:none) Sequence 49374 from Patent WO20080... 143 2e-59
(A4VN44) RecName: Full=Phosphoenolpyruvate carboxylase; ... 153 2e-59
BT053945_1(BT053945|pid:none) Zea mays full-length cDNA clone ZM... 146 2e-59
BT033963_1(BT033963|pid:none) Zea mays full-length cDNA clone ZM... 146 2e-59
BT034180_1(BT034180|pid:none) Zea mays full-length cDNA clone ZM... 146 2e-59
CP000647_4200(CP000647|pid:none) Klebsiella pneumoniae subsp. pn... 137 2e-59
CU468135_133(CU468135|pid:none) Erwinia tasmaniensis strain ET1/... 142 2e-59
(B6EMN4) RecName: Full=Phosphoenolpyruvate carboxylase; ... 145 2e-59
(Q4ZWV3) RecName: Full=Phosphoenolpyruvate carboxylase; ... 148 3e-59
(Q3KHE4) RecName: Full=Phosphoenolpyruvate carboxylase; ... 146 3e-59
AJ231296_1(AJ231296|pid:none) Polytrichum formosum partial mRNA ... 145 4e-59
AJ231282_1(AJ231282|pid:none) Calliergonella cuspidata partial m... 139 4e-59
AK065029_1(AK065029|pid:none) Oryza sativa Japonica Group cDNA c... 140 5e-59
BA000037_3004(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, ch... 142 5e-59
CP000469_3879(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 141 5e-59
(B5Z058) RecName: Full=Phosphoenolpyruvate carboxylase; ... 137 5e-59
(Q83IS7) RecName: Full=Phosphoenolpyruvate carboxylase; ... 137 5e-59
(Q0SY38) RecName: Full=Phosphoenolpyruvate carboxylase; ... 137 5e-59
AB078720_1(AB078720|pid:none) Nicotiana sylvestris Nsppc3 gene f... 140 5e-59
AJ231295_1(AJ231295|pid:none) Kalanchoe petitiana partial mRNA f... 142 5e-59
AJ223496_1(AJ223496|pid:none) Brassica juncea mRNA for phosphoen... 144 7e-59
(P16097) RecName: Full=Phosphoenolpyruvate carboxylase 2; ... 144 7e-59
(B7NU44) RecName: Full=Phosphoenolpyruvate carboxylase; ... 137 7e-59
AM181176_1209(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 144 7e-59
AK227556_1(AK227556|pid:none) Arabidopsis thaliana mRNA for phos... 138 9e-59
(Q84VW9) RecName: Full=Phosphoenolpyruvate carboxylase 3; ... 138 9e-59
(P29194) RecName: Full=Phosphoenolpyruvate carboxylase 2; ... 140 9e-59
(Q5E2E3) RecName: Full=Phosphoenolpyruvate carboxylase; ... 143 9e-59
AK317277_1(AK317277|pid:none) Arabidopsis thaliana AT1G53310 mRN... 141 1e-58
(Q9MAH0) RecName: Full=Phosphoenolpyruvate carboxylase 1; ... 141 1e-58
AM235211_1(AM235211|pid:none) Lupinus luteus mRNA for phosphoeno... 138 1e-58
AB008540_1(AB008540|pid:none) Glycine max mRNA for phosphoenolpy... 137 1e-58
CP000446_3691(CP000446|pid:none) Shewanella sp. MR-4, complete g... 141 1e-58
(A1AID4) RecName: Full=Phosphoenolpyruvate carboxylase; ... 136 1e-58
(B5FBP8) RecName: Full=Phosphoenolpyruvate carboxylase; ... 142 1e-58
AB097088_1(AB097088|pid:none) Glycine max GmPEPC7 gene for phosp... 136 1e-58
(P51063) RecName: Full=Phosphoenolpyruvate carboxylase; ... 139 1e-58
AF159051_1(AF159051|pid:none) Picea abies phosphoenolpyruvate ca... 139 1e-58
CP000507_253(CP000507|pid:none) Shewanella amazonensis SB2B, com... 141 1e-58
CP001323_87(CP001323|pid:none) Micromonas sp. RCC299 chromosome ... 150 2e-58
EF634319_1(EF634319|pid:none) Ricinus communis phosphoenolpyruva... 140 2e-58
CP000444_234(CP000444|pid:none) Shewanella sp. MR-7, complete ge... 140 2e-58
FP236842_155(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/96... 142 2e-58
(Q886R9) RecName: Full=Phosphoenolpyruvate carboxylase; ... 146 2e-58
CP000472_1960(CP000472|pid:none) Shewanella piezotolerans WP3, c... 144 2e-58
AJ243417_1(AJ243417|pid:none) Lycopersicon esculentum mRNA for p... 137 2e-58
(P29195) RecName: Full=Phosphoenolpyruvate carboxylase 1; ... 141 2e-58
AJ231299_1(AJ231299|pid:none) Symphyogyna brongniartii partial m... 142 2e-58
AJ252948_1(AJ252948|pid:none) Vanilla phalaenopsis partial mRNA ... 143 2e-58
AJ231303_1(AJ231303|pid:none) Kalanchoe streptantha partial mRNA... 143 3e-58
AJ231288_1(AJ231288|pid:none) Kalanchoe gracilipes partial mRNA ... 140 3e-58
(P51059) RecName: Full=Phosphoenolpyruvate carboxylase 2; ... 140 4e-58
AY563044_1(AY563044|pid:none) Glycine max phosphoenolpyruvate ca... 139 4e-58
EU069413_1(EU069413|pid:none) Jatropha curcas phosphoenolpyruvat... 141 4e-58
(A8G1A9) RecName: Full=Phosphoenolpyruvate carboxylase; ... 142 4e-58
Y17844_1(Y17844|pid:none) Drosanthemum paxianum mRNA for phospho... 140 4e-58
FB830091_1(FB830091|pid:none) Sequence 49364 from Patent WO20080... 139 5e-58
CP000681_3690(CP000681|pid:none) Shewanella putrefaciens CN-32, ... 141 5e-58
CP000503_3812(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 141 5e-58
(A3Q9C4) RecName: Full=Phosphoenolpyruvate carboxylase; ... 139 5e-58
(P30694) RecName: Full=Phosphoenolpyruvate carboxylase; ... 138 7e-58
(Q42730) RecName: Full=Phosphoenolpyruvate carboxylase; ... 138 7e-58
CP000753_4040(CP000753|pid:none) Shewanella baltica OS185, compl... 141 7e-58
(Q32AB9) RecName: Full=Phosphoenolpyruvate carboxylase; ... 137 7e-58
(A4WG55) RecName: Full=Phosphoenolpyruvate carboxylase; ... 134 7e-58
X95860_1(X95860|pid:none) Pereskia aculeata mRNA for phosphoenol... 139 7e-58
(P10490) RecName: Full=Phosphoenolpyruvate carboxylase 1; ... 137 9e-58
AB012228_1(AB012228|pid:none) Zea mays Ppc1C mRNA for phosphoeno... 139 9e-58
FB830295_1(FB830295|pid:none) Sequence 49568 from Patent WO20080... 139 9e-58
AB085948_1(AB085948|pid:none) Eleocharis vivipara pep1 mRNA for ... 142 1e-57
(Q3IBX6) RecName: Full=Phosphoenolpyruvate carboxylase; ... 147 1e-57
(Q8EK30) RecName: Full=Phosphoenolpyruvate carboxylase; ... 137 1e-57
FM954972_2722(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 142 1e-57
FM211051_10(FM211051|pid:none) Photorhabdus asymbiotica subsp. a... 138 1e-57
(Q01647) RecName: Full=Phosphoenolpyruvate carboxylase; ... 137 2e-57
S52853(S52853) phosphoenolpyruvate carboxylase (EC 4.1.1.31) - F... 137 2e-57
(Q5GM68) RecName: Full=Phosphoenolpyruvate carboxylase 2; ... 141 2e-57
(Q43299) RecName: Full=Phosphoenolpyruvate carboxylase; ... 136 2e-57
AE009952_303(AE009952|pid:none) Yersinia pestis KIM, complete ge... 135 2e-57
(A7FCZ7) RecName: Full=Phosphoenolpyruvate carboxylase; ... 135 2e-57
DQ655705_1(DQ655705|pid:none) Sesuvium portulacastrum phosphoeno... 142 2e-57
EU391629_1(EU391629|pid:none) Arachis hypogaea phosphoenolpyruva... 139 2e-57
(P27154) RecName: Full=Phosphoenolpyruvate carboxylase; ... 140 2e-57
AY210895_1(AY210895|pid:none) Arabidopsis thaliana phosphoenolpy... 140 2e-57
(P29196) RecName: Full=Phosphoenolpyruvate carboxylase; ... 135 2e-57
X90982_1(X90982|pid:none) S.tuberosum ppc1 gene. 135 2e-57
CP000438_1322(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 151 2e-57
AE003852_2609(AE003852|pid:none) Vibrio cholerae O1 biovar eltor... 143 3e-57
(Q9KNT4) RecName: Full=Phosphoenolpyruvate carboxylase; ... 143 3e-57
CP000961_327(CP000961|pid:none) Shewanella woodyi ATCC 51908, co... 137 3e-57
AB078719_1(AB078719|pid:none) Nicotiana sylvestris Nsppc2 gene f... 136 3e-57
AB078718_1(AB078718|pid:none) Nicotiana sylvestris Nsppc1 gene f... 137 3e-57
S68415(S68415;S72558)phosphoenolpyruvate carboxylase (EC 4.1.1.3... 143 3e-57
S68414(S68414;S72557)phosphoenolpyruvate carboxylase (EC 4.1.1.3... 141 3e-57
AY950666_1(AY950666|pid:none) Alternanthera ficoidea phosphoenol... 139 3e-57
AE017042_3010(AE017042|pid:none) Yersinia pestis biovar Microtus... 135 3e-57
CP000627_2164(CP000627|pid:none) Vibrio cholerae O395 chromosome... 142 3e-57
DQ538355_1(DQ538355|pid:none) Suaeda linifolia phosphoenolpyruva... 137 4e-57
AY491400_1(AY491400|pid:none) Setaria italica C3 phosphoenolpyru... 135 5e-57
CP000388_602(CP000388|pid:none) Pseudoalteromonas atlantica T6c,... 144 5e-57
CP000891_4190(CP000891|pid:none) Shewanella baltica OS195, compl... 138 6e-57
(A1U2U4) RecName: Full=Phosphoenolpyruvate carboxylase; ... 130 6e-57
AY950667_1(AY950667|pid:none) Alternanthera sessilis phosphoenol... 138 8e-57
CP000447_189(CP000447|pid:none) Shewanella frigidimarina NCIMB 4... 136 8e-57
(A1JI20) RecName: Full=Phosphoenolpyruvate carboxylase; ... 132 8e-57
FB830121_1(FB830121|pid:none) Sequence 49394 from Patent WO20080... 134 8e-57
AJ011303_1(AJ011303|pid:none) Vicia faba mRNA for phosphoenolpyr... 134 8e-57
AF459644_1(AF459644|pid:none) Lupinus albus phosphoenolpyruvate ... 131 1e-56
D83052_1(D83052|pid:none) Aloe arborescens ppc1 mRNA for phospho... 135 1e-56
AM426708_2(AM426708|pid:none) Vitis vinifera contig VV78X157289.... 132 1e-56
CP000302_247(CP000302|pid:none) Shewanella denitrificans OS217, ... 137 1e-56
AJ312661_1(AJ312661|pid:none) Microcoelia exilis partial mRNA fo... 134 1e-56
AE016827_1017(AE016827|pid:none) Mannheimia succiniciproducens M... 141 1e-56
AM689878_1(AM689878|pid:none) Cyrtococcum patens partial mRNA fo... 134 1e-56
(Q02909) RecName: Full=Phosphoenolpyruvate carboxylase, housekee... 134 2e-56
AF248080_1(AF248080|pid:none) Flaveria trinervia phosphoenolpyru... 137 2e-56
FB830093_1(FB830093|pid:none) Sequence 49366 from Patent WO20080... 140 2e-56
D13987_1(D13987|pid:none) Brassica napus PE3-PEPCase gene for ph... 140 2e-56
AF008939_1(AF008939|pid:none) Gossypium hirsutum phosphoenolpyru... 134 2e-56
AF314923_1(AF314923|pid:none) Phaseolus vulgaris phosphoenolpyru... 136 3e-56
AJ231287_1(AJ231287|pid:none) Jungermannia leiantha partial mRNA... 133 3e-56
AJ252925_1(AJ252925|pid:none) Kalanchoe streptantha partial mRNA... 132 3e-56
EF449771_1(EF449771|pid:none) Microbacterium sp. CQ0110Y PhtY (p... 134 5e-56
CR378663_249(CR378663|pid:none) Photobacterium profundum SS9; se... 142 5e-56
AJ532902_1(AJ532902|pid:none) Arabidopsis thaliana mRNA for phos... 135 6e-56
AJ312663_1(AJ312663|pid:none) Microcoelia exilis partial mRNA fo... 132 7e-56
EU315246_1(EU315246|pid:none) Malus x domestica phosphoenolpyruv... 136 8e-56
AY995212_1(AY995212|pid:none) Echinochloa crus-galli C4 phosphoe... 136 8e-56
(A3MA94) RecName: Full=Phosphoenolpyruvate carboxylase; ... 126 8e-56
CP001172_29(CP001172|pid:none) Acinetobacter baumannii AB307-029... 126 8e-56
AJ300742_1(AJ300742|pid:none) Phalaenopsis amabilis partial ppc ... 132 1e-55
CP001182_3778(CP001182|pid:none) Acinetobacter baumannii AB0057,... 126 1e-55
AJ252915_1(AJ252915|pid:none) Kalanchoe kewensis partial mRNA fo... 130 1e-55
AJ252919_1(AJ252919|pid:none) Kalanchoe pinnata partial mRNA for... 130 1e-55
AJ312635_1(AJ312635|pid:none) Kalanchoe daigremontiana partial m... 130 1e-55
CR954212_292(CR954212|pid:none) Ostreococcus tauri strain OTTH05... 132 1e-55
AJ312613_1(AJ312613|pid:none) Pinus caribaea partial mRNA for ph... 129 1e-55
AJ312647_1(AJ312647|pid:none) Kalanchoe pinnata partial mRNA for... 132 2e-55
AJ312633_1(AJ312633|pid:none) Kalanchoe daigremontiana partial m... 129 2e-55
AM689877_1(AM689877|pid:none) Cyrtococcum patens partial mRNA fo... 128 2e-55
AF512995_1(AF512995|pid:none) Citrus junos phosphoenolpyruvate c... 130 2e-55
AJ312649_1(AJ312649|pid:none) Kalanchoe pinnata partial mRNA for... 132 2e-55
U65227_1(U65227|pid:none) Hydrilla verticillata phosphoenolpyruv... 131 2e-55
AJ312612_1(AJ312612|pid:none) Pinus caribaea partial mRNA for ph... 129 2e-55
AJ231290_1(AJ231290|pid:none) Leucobryum juniperoideum partial m... 128 3e-55
AJ312659_1(AJ312659|pid:none) Euphorbia tirucalli partial mRNA f... 133 3e-55
AJ252926_1(AJ252926|pid:none) Kalanchoe petitiana partial mRNA f... 130 3e-55
AJ312648_1(AJ312648|pid:none) Kalanchoe pinnata partial mRNA for... 129 3e-55
AJ312662_1(AJ312662|pid:none) Microcoelia exilis partial mRNA fo... 129 3e-55
AJ312675_1(AJ312675|pid:none) Pyrrosia longifolia partial mRNA f... 141 3e-55
AJ312680_1(AJ312680|pid:none) Kalanchoe fedtschenkoi partial mRN... 132 4e-55
AJ312682_1(AJ312682|pid:none) Kalanchoe fedtschenkoi partial mRN... 132 4e-55
(Q6F6Q6) RecName: Full=Phosphoenolpyruvate carboxylase; ... 121 7e-55
AJ312657_1(AJ312657|pid:none) Euphorbia tirucalli partial mRNA f... 132 9e-55
AJ312658_1(AJ312658|pid:none) Euphorbia tirucalli partial mRNA f... 132 9e-55
AJ312660_1(AJ312660|pid:none) Euphorbia tirucalli partial mRNA f... 130 9e-55
AJ312643_1(AJ312643|pid:none) Mesembryanthemum crystallinum part... 127 9e-55
AF135371_1(AF135371|pid:none) Lotus corniculatus phosphoenol pyr... 135 1e-54
FB830123_1(FB830123|pid:none) Sequence 49396 from Patent WO20080... 134 1e-54
AJ312641_1(AJ312641|pid:none) Mesembryanthemum crystallinum part... 130 1e-54
AF530570_1(AF530570|pid:none) X Mokara cv. 'Yellow' phosphoenolp... 134 2e-54
AJ312625_1(AJ312625|pid:none) Vanilla planifolia partial mRNA fo... 132 2e-54
AJ252917_1(AJ252917|pid:none) Kalanchoe tomentosa partial mRNA f... 129 2e-54
X87820_1(X87820|pid:none) K.blossfeldiana mRNA for phosphoenolpy... 133 2e-54
AJ312616_1(AJ312616|pid:none) Cycas revoluta partial mRNA for ph... 130 2e-54
JH0381(JH0381;S16455)phosphoenolpyruvate carboxylase (EC 4.1.1.3... 141 3e-54
AM690278_1(AM690278|pid:none) Zuloagaea bulbosa partial ppc-C4 g... 129 3e-54
S68413(S68413)phosphoenolpyruvate carboxylase (EC 4.1.1.31) 1 - ... 138 3e-54
DQ320104_1(DQ320104|pid:none) Clusia hilariana phosphoenolpyruva... 130 3e-54
AJ312634_1(AJ312634|pid:none) Kalanchoe daigremontiana partial m... 129 3e-54
AJ312642_1(AJ312642|pid:none) Mesembryanthemum crystallinum part... 127 3e-54
AJ312654_1(AJ312654|pid:none) Tillandsia usneoides partial mRNA ... 125 6e-54
AJ252938_1(AJ252938|pid:none) Dendrobium crumentatum partial mRN... 134 8e-54
AJ252930_1(AJ252930|pid:none) Vanilla phalaenopsis partial mRNA ... 127 8e-54
CP001103_736(CP001103|pid:none) Alteromonas macleodii 'Deep ecot... 139 1e-53
AM690279_1(AM690279|pid:none) Panicum coloratum partial ppc-C4 g... 119 1e-53
AM690255_1(AM690255|pid:none) Cenchrus echinatus partial ppc-C4 ... 121 1e-53
AJ312651_1(AJ312651|pid:none) Kalanchoe pinnata partial mRNA for... 125 1e-53
AJ312652_1(AJ312652|pid:none) Kalanchoe pinnata partial mRNA for... 125 1e-53
AJ252941_1(AJ252941|pid:none) Dendrobium moschatum partial mRNA ... 131 1e-53
AJ312670_1(AJ312670|pid:none) Leptotes bicolor partial mRNA for ... 127 1e-53
(Q1QX15) RecName: Full=Phosphoenolpyruvate carboxylase; ... 127 2e-53
AM689880_1(AM689880|pid:none) Phragmites australis partial mRNA ... 123 2e-53
AJ252928_1(AJ252928|pid:none) Vanilla aphylla partial mRNA for p... 127 2e-53
AJ310353_1(AJ310353|pid:none) Sticherus bifidus partial mRNA for... 133 2e-53
X95856_1(X95856|pid:none) Neoregelia ampullacea mRNA for phospho... 129 3e-53
X87819_1(X87819|pid:none) K.blossfeldiana mRNA for phosphoenolpy... 128 3e-53
AJ312628_1(AJ312628|pid:none) Ananas comosus partial mRNA for ph... 125 3e-53
DQ320102_1(DQ320102|pid:none) Clusia hilariana phosphoenolpyruva... 125 3e-53
AJ310350_1(AJ310350|pid:none) Gnetum leyboldii partial mRNA for ... 128 3e-53
AJ312676_1(AJ312676|pid:none) Pyrrosia longifolia partial mRNA f... 134 4e-53
AJ252943_1(AJ252943|pid:none) Dendrobium fimbriatum partial mRNA... 132 5e-53
FB830109_1(FB830109|pid:none) Sequence 49382 from Patent WO20080... 122 6e-53
X91406_1(X91406|pid:none) T.usneoides mRNA for phosphoenolpyruva... 122 6e-53
AJ312637_1(AJ312637|pid:none) Clusia uvitana partial mRNA for ph... 124 6e-53
AJ312636_1(AJ312636|pid:none) Clusia uvitana partial mRNA for ph... 124 6e-53
AM690280_1(AM690280|pid:none) Panicum laetum partial ppc-C4 gene... 117 8e-53
FB830111_1(FB830111|pid:none) Sequence 49384 from Patent WO20080... 123 1e-52
AM690293_1(AM690293|pid:none) Setaria palmifolia partial ppc-C4 ... 118 1e-52
DQ320103_1(DQ320103|pid:none) Clusia hilariana phosphoenolpyruva... 121 1e-52
AM689899_1(AM689899|pid:none) Hymenachne amplexicaulis partial p... 120 1e-52
AJ252944_1(AJ252944|pid:none) Dendrobium delicatum partial mRNA ... 132 1e-52
U65226_1(U65226|pid:none) Hydrilla verticillata phosphoenolpyruv... 121 1e-52
AM690296_1(AM690296|pid:none) Spinifex littoreus partial ppc-C4 ... 124 2e-52
AM689890_1(AM689890|pid:none) Arrhenatherum elatius partial ppc-... 120 2e-52
AB055074_1(AB055074|pid:none) Oryza sativa Japonica Group mRNA f... 120 2e-52
AJ252934_1(AJ252934|pid:none) Dendrobium loddigesii partial mRNA... 128 2e-52
AM690286_1(AM690286|pid:none) Pennisetum longissimum partial ppc... 122 2e-52
AM690308_1(AM690308|pid:none) Tripogon minimus partial ppc-C4 ge... 118 2e-52
AJ252929_1(AJ252929|pid:none) Vanilla pompona partial mRNA for p... 123 3e-52
AM689891_1(AM689891|pid:none) Arundinaria sp. PC-2007 partial pp... 119 4e-52
AM689884_1(AM689884|pid:none) Phragmites australis partial ppc-B... 117 4e-52
AJ312631_1(AJ312631|pid:none) Ananas comosus partial mRNA for ph... 123 4e-52
AJ252936_1(AJ252936|pid:none) Dendrobium thyrsifolium partial mR... 128 5e-52
AM690223_1(AM690223|pid:none) Eulalia aurea partial ppc-C4 gene ... 115 7e-52
AJ312672_1(AJ312672|pid:none) Leptotes bicolor partial mRNA for ... 128 7e-52
X91632_1(X91632|pid:none) S.aphylla mRNA for phosphoenolpyruvate... 129 7e-52
AM689898_1(AM689898|pid:none) Hordeum vulgare partial ppc-B1 gen... 117 9e-52
AM690289_1(AM690289|pid:none) Pogonatherum paniceum partial ppc-... 115 9e-52
AM689893_1(AM689893|pid:none) Bromus hordeaceus partial ppc-B1 g... 118 1e-51
AM689888_1(AM689888|pid:none) Aira caryophyllea partial ppc-B1 g... 115 1e-51
AM690254_1(AM690254|pid:none) Capillipedium parviflorum partial ... 114 1e-51
AM690250_1(AM690250|pid:none) Bothriochloa ischaemum partial ppc... 114 1e-51
AJ252933_1(AJ252933|pid:none) Dendrobium loddigesii partial mRNA... 125 1e-51
AJ312671_1(AJ312671|pid:none) Leptotes bicolor partial mRNA for ... 127 1e-51
AM690220_1(AM690220|pid:none) Enteropogon prieurii partial ppc-B... 117 2e-51
AJ252939_1(AJ252939|pid:none) Dendrobium farmeri partial mRNA fo... 127 2e-51
AJ252927_1(AJ252927|pid:none) Vanilla aphylla partial mRNA for p... 123 2e-51
AM689887_1(AM689887|pid:none) Streptochaeta sodiroana partial pp... 114 2e-51
AM690304_1(AM690304|pid:none) Tetrapogon cenchriformis partial p... 117 2e-51
AM689886_1(AM689886|pid:none) Stipa sp. PC-2007 partial ppc-B1 g... 115 2e-51
AM689885_1(AM689885|pid:none) Phyllostachys sp. PC-2007 partial ... 119 3e-51
AM690248_1(AM690248|pid:none) Arthropogon lanceolatus partial pp... 115 3e-51
AM690263_1(AM690263|pid:none) Cynodon dactylon partial ppc-B2 ge... 117 3e-51
FB830107_1(FB830107|pid:none) Sequence 49380 from Patent WO20080... 127 4e-51
AM690212_1(AM690212|pid:none) Bothriochloa saccharoides partial ... 114 4e-51
AM690226_1(AM690226|pid:none) Hymenachne acutigluma partial ppc-... 114 4e-51
AJ252935_1(AJ252935|pid:none) Dendrobium thyrsifolium partial mR... 124 6e-51
AM690309_1(AM690309|pid:none) Tristachya leucothrix partial ppc-... 115 8e-51
X87818_1(X87818|pid:none) K.blossfeldiana mRNA for phosphoenolpy... 127 8e-51
AM690213_1(AM690213|pid:none) Digitaria didactyla partial ppc-C4... 114 1e-50
AM690303_1(AM690303|pid:none) Tetrapogon cenchriformis partial p... 113 1e-50
AM690274_1(AM690274|pid:none) Panicum millegrana partial ppc-B2 ... 113 1e-50
AM690229_1(AM690229|pid:none) Ichnanthus sp. PC-2007 partial ppc... 113 1e-50
AM690306_1(AM690306|pid:none) Tragus racemosus partial ppc-B2 ge... 113 1e-50
AM690230_1(AM690230|pid:none) Ichnanthus vicinus partial ppc-B2 ... 112 1e-50
AE008919_48(AE008919|pid:none) Uncultured marine proteobacterium... 118 2e-50
AM689895_1(AM689895|pid:none) Echinolaena inflexa partial ppc-B1... 116 2e-50
AM690235_1(AM690235|pid:none) Leptocoryphium lanatum partial ppc... 114 2e-50
AM690305_1(AM690305|pid:none) Thysanolaena latifolia partial ppc... 113 2e-50
AM690211_1(AM690211|pid:none) Dactyloctenium aegyptium partial p... 112 2e-50
AM690301_1(AM690301|pid:none) Stipagrostis acutiflora partial pp... 112 2e-50
AM690260_1(AM690260|pid:none) Coix lacryma-jobi partial ppc-C4 g... 115 3e-50
AM689896_1(AM689896|pid:none) Microlaena stipoides partial ppc-B... 114 3e-50
AM690272_1(AM690272|pid:none) Ottochloa nodosa partial ppc-B2 ge... 113 3e-50
X95859_1(X95859|pid:none) Isoetes durieui mRNA for phosphoenolpy... 119 3e-50
X91635_1(X91635|pid:none) M.exilis mRNA for phosphoenolpyruvate ... 125 4e-50
AM690239_1(AM690239|pid:none) Merxmuellera disticha partial ppc-... 114 5e-50
AM690241_1(AM690241|pid:none) Acroceras tonkinense partial ppc-B... 112 5e-50
AM690288_1(AM690288|pid:none) Poecilostachys bromoides partial p... 112 5e-50
AM690238_1(AM690238|pid:none) Melinis minutiflora partial ppc-C4... 116 6e-50
AM690225_1(AM690225|pid:none) Hordeum vulgare partial ppc-B2 gen... 113 6e-50
AM690307_1(AM690307|pid:none) Tragus racemosus partial ppc-C4 ge... 113 6e-50
AM689901_1(AM689901|pid:none) Nardus sp. PC-2007 partial ppc-B1 ... 113 6e-50
AM690271_1(AM690271|pid:none) Otachyrium versicolor partial ppc-... 112 6e-50
AM690218_1(AM690218|pid:none) Eleusine indica partial ppc-B2 gen... 112 6e-50
AM690264_1(AM690264|pid:none) Cynodon dactylon partial ppc-C4 ge... 112 6e-50
AM689883_1(AM689883|pid:none) Pharus latifolius partial ppc-B1 g... 117 8e-50
AM690291_1(AM690291|pid:none) Merxmuellera macowanii partial ppc... 112 8e-50
AM690240_1(AM690240|pid:none) Merxmuellera stricta partial ppc-B... 112 1e-49
AM690252_1(AM690252|pid:none) Brachypodium pinnatum partial ppc-... 111 1e-49
AM689897_1(AM689897|pid:none) Guadua sp. PC-2007 partial ppc-B1 ... 117 1e-49
AM690228_1(AM690228|pid:none) Ichnanthus panicoides partial ppc-... 112 1e-49
FB830125_1(FB830125|pid:none) Sequence 49398 from Patent WO20080... 133 1e-49
AM690257_1(AM690257|pid:none) Centropodia forskalii partial ppc-... 114 1e-49
AM690266_1(AM690266|pid:none) Micraira spiciforma partial ppc-B2... 112 1e-49
AM690285_1(AM690285|pid:none) Paspalum dilatatum partial ppc-C4 ... 119 2e-49
AM690237_1(AM690237|pid:none) Melica uniflora partial ppc-B2 gen... 111 2e-49
AM690262_1(AM690262|pid:none) Crypsis schoenoides partial ppc-C4... 113 3e-49
AM690287_1(AM690287|pid:none) Phragmites australis partial ppc-B... 112 4e-49
AM690292_1(AM690292|pid:none) Sacciolepis indica partial ppc-B2 ... 110 4e-49
AM690251_1(AM690251|pid:none) Brachiaria villosa partial ppc-C4 ... 114 5e-49
(Q0VRS0) RecName: Full=Phosphoenolpyruvate carboxylase; ... 128 7e-49
AM690258_1(AM690258|pid:none) Chasmanthium latifolium partial pp... 113 9e-49
AM690310_1(AM690310|pid:none) Urochloa maxima partial ppc-C4 gen... 113 1e-48
AM690300_1(AM690300|pid:none) Stipa sp. PC-2007 partial ppc-B2 g... 111 1e-48
T06547(T06547) probable phosphoenolpyruvate carboxylase (EC 4.1.... 140 1e-48
AM690261_1(AM690261|pid:none) Cortaderia richardii partial ppc-B... 113 2e-48
AM690233_1(AM690233|pid:none) Isachne arundinacea partial ppc-B2... 113 2e-48
AM690270_1(AM690270|pid:none) Oplismenus undulatifolius partial ... 109 2e-48
X91633_1(X91633|pid:none) C.pusilla mRNA for phosphoenolpyruvate... 114 3e-48
AM690246_1(AM690246|pid:none) Aristida rhiniochloa partial ppc-C... 110 3e-48
X95853_1(X95853|pid:none) Conocephalum conicum mRNA for phosphoe... 123 4e-48
AM690215_1(AM690215|pid:none) Echinochloa utilis partial ppc-C4 ... 108 1e-47
CP000239_801(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, comp... 132 1e-47
CP000056_483(CP000056|pid:none) Streptococcus pyogenes MGAS6180,... 135 5e-47
CP000259_495(CP000259|pid:none) Streptococcus pyogenes MGAS9429,... 135 5e-47
CP000262_524(CP000262|pid:none) Streptococcus pyogenes MGAS10750... 135 5e-47
CP000829_477(CP000829|pid:none) Streptococcus pyogenes NZ131, co... 135 5e-47
AE014074_430(AE014074|pid:none) Streptococcus pyogenes MGAS315, ... 135 5e-47
(Q8K873) RecName: Full=Phosphoenolpyruvate carboxylase; ... 135 5e-47
CP000017_504(CP000017|pid:none) Streptococcus pyogenes MGAS5005,... 135 8e-47
CP000003_526(CP000003|pid:none) Streptococcus pyogenes MGAS10394... 135 8e-47
X95851_1(X95851|pid:none) Chara fragalis mRNA for phosphoenolpyr... 129 8e-47
(Q9A0U7) RecName: Full=Phosphoenolpyruvate carboxylase; ... 134 1e-46
AM690253_1(AM690253|pid:none) Calamovilfa sp. PC-2007 partial pp... 106 1e-46
(Q8P1W7) RecName: Full=Phosphoenolpyruvate carboxylase; ... 135 2e-46
AM946015_590(AM946015|pid:none) Streptococcus uberis 0140J compl... 134 3e-46
CP000240_1794(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-1... 127 5e-46
AF236126_1(AF236126|pid:none) Vitis vinifera PEP carboxylase (GP... 132 5e-46
CP000269_1141(CP000269|pid:none) Janthinobacterium sp. Marseille... 124 1e-45
CU234118_2427(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 120 1e-45
AJ312673_1(AJ312673|pid:none) Aloe vera partial mRNA for phospho... 130 2e-45
CP000089_1747(CP000089|pid:none) Dechloromonas aromatica RCB, co... 122 7e-45
AJ252937_1(AJ252937|pid:none) Dendrobium thyrsifolium partial mR... 108 2e-44
(P28594) RecName: Full=Phosphoenolpyruvate carboxylase; ... 117 2e-44
AB461362_1(AB461362|pid:none) Emiliania huxleyi EhPEPC mRNA for ... 129 2e-44
AE2413(AE2413) phosphoenolpyruvate carboxylase [imported] - Nost... 117 2e-44
CP000494_2750(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 117 3e-44
CP001196_1293(CP001196|pid:none) Oligotropha carboxidovorans OM5... 122 3e-44
(Q3MB82) RecName: Full=Phosphoenolpyruvate carboxylase; ... 117 4e-44
(Q218E3) RecName: Full=Phosphoenolpyruvate carboxylase; ... 120 6e-44
(Q3K1U6) RecName: Full=Phosphoenolpyruvate carboxylase; ... 125 8e-44
(Q89R17) RecName: Full=Phosphoenolpyruvate carboxylase; ... 119 8e-44
AM167938_1(AM167938|pid:none) Streptococcus thermophilus ppC gen... 129 1e-43
(Q5M0E6) RecName: Full=Phosphoenolpyruvate carboxylase; ... 128 1e-43
(Q5M4Z3) RecName: Full=Phosphoenolpyruvate carboxylase; ... 128 1e-43
CP000781_317(CP000781|pid:none) Xanthobacter autotrophicus Py2, ... 120 1e-43
CP000084_773(CP000084|pid:none) Candidatus Pelagibacter ubique H... 114 1e-43
FM204884_1252(FM204884|pid:none) Streptococcus equi subsp. zooep... 124 4e-43
(O32483) RecName: Full=Phosphoenolpyruvate carboxylase; ... 113 5e-43
(Q2IU23) RecName: Full=Phosphoenolpyruvate carboxylase; ... 114 5e-43
FM204883_734(FM204883|pid:none) Streptococcus equi subsp. equi 4... 124 7e-43
X91140_1(X91140|pid:none) S.tuberosum ppc2 gene. 136 7e-43
(P0A3X5) RecName: Full=Phosphoenolpyruvate carboxylase; ... 121 8e-43
CP001096_1932(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 112 8e-43
CP000667_875(CP000667|pid:none) Salinispora tropica CNB-440, com... 131 1e-42
CP001337_391(CP001337|pid:none) Chloroflexus aggregans DSM 9485,... 124 1e-42
X95857_1(X95857|pid:none) Chara fragalis mRNA for phosphoenolpyr... 101 2e-42
(Q9RNU9) RecName: Full=Phosphoenolpyruvate carboxylase; ... 130 2e-42
D89668_1(D89668|pid:none) Rhodopseudomonas palustris gene for ph... 112 3e-42
AJ310349_1(AJ310349|pid:none) Cupressus sp. HHG-2001 partial mRN... 109 3e-42
CP001341_736(CP001341|pid:none) Arthrobacter chlorophenolicus A6... 131 4e-42
CP001280_1779(CP001280|pid:none) Methylocella silvestris BL2, co... 122 4e-42
(Q5P7H5) RecName: Full=Phosphoenolpyruvate carboxylase; ... 123 5e-42
AM260479_2845(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 116 7e-42
CU633749_2346(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 115 7e-42
(Q6R2V6) RecName: Full=Phosphoenolpyruvate carboxylase 2; ... 172 3e-41
AJ312668_1(AJ312668|pid:none) Leptotes bicolor partial mRNA for ... 128 5e-41
(A1K454) RecName: Full=Phosphoenolpyruvate carboxylase; ... 124 6e-41
AJ312629_1(AJ312629|pid:none) Ananas comosus partial mRNA for ph... 104 6e-41
CP001364_3343(CP001364|pid:none) Chloroflexus sp. Y-400-fl, comp... 118 8e-41
(Q8RQL3) RecName: Full=Phosphoenolpyruvate carboxylase; ... 102 8e-41
(Q97QX6) RecName: Full=Phosphoenolpyruvate carboxylase; ... 115 8e-41
(Q04KL8) RecName: Full=Phosphoenolpyruvate carboxylase; ... 115 8e-41
CP000919_953(CP000919|pid:none) Streptococcus pneumoniae JJA, co... 115 8e-41
CP001033_1212(CP001033|pid:none) Streptococcus pneumoniae CGSP14... 115 8e-41
CP001344_1988(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 110 1e-40
CP001281_1392(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 120 1e-40
(Q82WS3) RecName: Full=Phosphoenolpyruvate carboxylase; ... 114 1e-40
CP000920_977(CP000920|pid:none) Streptococcus pneumoniae P1031, ... 114 1e-40
CP000454_612(CP000454|pid:none) Arthrobacter sp. FB24, complete ... 127 2e-40
CP000529_3063(CP000529|pid:none) Polaromonas naphthalenivorans C... 119 3e-40
(A3CP10) RecName: Full=Phosphoenolpyruvate carboxylase; ... 115 3e-40
CP001015_978(CP001015|pid:none) Streptococcus pneumoniae G54, co... 115 3e-40
(A7NLR3) RecName: Full=Phosphoenolpyruvate carboxylase; ... 117 4e-40
(Q8DV10) RecName: Full=Phosphoenolpyruvate carboxylase; ... 124 6e-40
(Q0AH90) RecName: Full=Phosphoenolpyruvate carboxylase; ... 117 1e-39
CP000352_2737(CP000352|pid:none) Ralstonia metallidurans CH34, c... 110 2e-39
AJ312666_1(AJ312666|pid:none) Solenangis aphylla partial mRNA fo... 112 2e-39
CT573213_579(CT573213|pid:none) Frankia alni str. ACN14A chromos... 129 5e-39
CP000413_1040(CP000413|pid:none) Lactobacillus gasseri ATCC 3332... 110 5e-39
CU914168_854(CU914168|pid:none) Ralstonia solanacearum strain IP... 112 5e-39
CP000100_2250(CP000100|pid:none) Synechococcus elongatus PCC 794... 110 7e-39
(Q1GBD4) RecName: Full=Phosphoenolpyruvate carboxylase; ... 112 7e-39
DQ320107_1(DQ320107|pid:none) Clusia articulata phosphoenolpyruv... 103 7e-39
CP000393_719(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 114 9e-39
CP000412_389(CP000412|pid:none) Lactobacillus delbrueckii subsp.... 112 9e-39
CT978603_2090(CT978603|pid:none) Synechococcus sp. RCC307 genomi... 105 1e-38
CP000316_3600(CP000316|pid:none) Polaromonas sp. JS666, complete... 115 2e-38
DQ320119_1(DQ320119|pid:none) Clusia rosea phosphoenolpyruvate c... 102 2e-38
(P74299) RecName: Full=Phosphoenolpyruvate carboxylase; ... 107 2e-38
CP000440_2460(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 115 2e-38
(Q143B6) RecName: Full=Phosphoenolpyruvate carboxylase; ... 106 3e-38
(A1WGR0) RecName: Full=Phosphoenolpyruvate carboxylase; ... 114 3e-38
DQ320115_1(DQ320115|pid:none) Clusia aripoensis phosphoenolpyruv... 101 3e-38
(Q8PP82) RecName: Full=Phosphoenolpyruvate carboxylase; ... 110 3e-38
DQ320112_1(DQ320112|pid:none) Clusia schomburgkiana phosphoenolp... 103 3e-38
(A8YVD9) RecName: Full=Phosphoenolpyruvate carboxylase; ... 110 4e-38
DQ320116_1(DQ320116|pid:none) Clusia alata phosphoenolpyruvate c... 102 4e-38
CP000124_1216(CP000124|pid:none) Burkholderia pseudomallei 1710b... 110 6e-38
CP000572_1069(CP000572|pid:none) Burkholderia pseudomallei 1106a... 110 6e-38
(A4JGV5) RecName: Full=Phosphoenolpyruvate carboxylase; ... 115 6e-38
(A1V5U2) RecName: Full=Phosphoenolpyruvate carboxylase; ... 110 6e-38
CP000820_6451(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 133 6e-38
DQ320108_1(DQ320108|pid:none) Clusia criuva phosphoenolpyruvate ... 101 6e-38
CP001068_2533(CP001068|pid:none) Ralstonia pickettii 12J chromos... 109 7e-38
CP000378_1801(CP000378|pid:none) Burkholderia cenocepacia AU 105... 111 1e-37
DQ320114_1(DQ320114|pid:none) Clusia nemorosa phosphoenolpyruvat... 104 1e-37
(Q8P336) RecName: Full=Phosphoenolpyruvate carboxylase; ... 111 1e-37
(Q4UR00) RecName: Full=Phosphoenolpyruvate carboxylase; ... 111 1e-37
(Q3BXC4) RecName: Full=Phosphoenolpyruvate carboxylase; ... 109 2e-37
CP000381_113(CP000381|pid:none) Neisseria meningitidis 053442, c... 105 4e-37
DQ320117_1(DQ320117|pid:none) Clusia venosa phosphoenolpyruvate ... 100 4e-37
(Q9JXG5) RecName: Full=Phosphoenolpyruvate carboxylase; ... 105 5e-37
CP000951_1387(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 110 6e-37
(A1KWE0) RecName: Full=Phosphoenolpyruvate carboxylase; ... 104 8e-37
(Q9JWH1) RecName: Full=Phosphoenolpyruvate carboxylase; ... 104 8e-37
AB055075_1(AB055075|pid:none) Oryza sativa Japonica Group mRNA f... 136 8e-37
(A2BTF4) RecName: Full=Phosphoenolpyruvate carboxylase; ... 100 1e-36
(A3PF64) RecName: Full=Phosphoenolpyruvate carboxylase; ... 100 1e-36
CR931997_998(CR931997|pid:none) Corynebacterium jeikeium K411 co... 104 1e-36
CS121416_1(CS121416|pid:none) Sequence 137 from Patent WO2005058... 97 1e-36
CP000975_1733(CP000975|pid:none) Methylacidiphilum infernorum V4... 124 1e-36
(P12880) RecName: Full=Phosphoenolpyruvate carboxylase; ... 97 1e-36
(Q93MH3) RecName: Full=Phosphoenolpyruvate carboxylase; ... 97 1e-36
AB115089_1(AB115089|pid:none) Corynebacterium glutamicum ppc gen... 97 1e-36
(A8G779) RecName: Full=Phosphoenolpyruvate carboxylase; ... 100 2e-36
CP001016_137(CP001016|pid:none) Beijerinckia indica subsp. indic... 113 2e-36
CP000360_3685(CP000360|pid:none) Acidobacteria bacterium Ellin34... 105 2e-36
CP000097_1916(CP000097|pid:none) Synechococcus sp. CC9902, compl... 102 3e-36
(Q318G7) RecName: Full=Phosphoenolpyruvate carboxylase; ... 100 3e-36
CP001503_2649(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 106 4e-36
(Q5F5A9) RecName: Full=Phosphoenolpyruvate carboxylase; ... 103 4e-36
(Q7WQB3) RecName: Full=Phosphoenolpyruvate carboxylase; ... 115 5e-36
(Q7P206) RecName: Full=Phosphoenolpyruvate carboxylase; ... 108 5e-36
CP000553_2014(CP000553|pid:none) Prochlorococcus marinus str. NA... 99 7e-36
DQ366723_23(DQ366723|pid:none) Uncultured Prochlorococcus marinu... 100 7e-36
CP000878_1696(CP000878|pid:none) Prochlorococcus marinus str. MI... 98 9e-36
AM902716_4543(AM902716|pid:none) Bordetella petrii strain DSM 12... 114 1e-35
CP000699_3110(CP000699|pid:none) Sphingomonas wittichii RW1, com... 114 1e-35
AM743169_736(AM743169|pid:none) Stenotrophomonas maltophilia K27... 106 2e-35
CP000088_2547(CP000088|pid:none) Thermobifida fusca YX, complete... 126 2e-35
CP000110_390(CP000110|pid:none) Synechococcus sp. CC9605, comple... 101 2e-35
(Q7U4M0) RecName: Full=Phosphoenolpyruvate carboxylase; ... 100 3e-35
CP000554_2253(CP000554|pid:none) Prochlorococcus marinus str. MI... 100 4e-35
AE008692_1496(AE008692|pid:none) Zymomonas mobilis subsp. mobili... 111 4e-35

>FB830099_1(FB830099|pid:none) Sequence 49372 from Patent
WO2008034648. &FB842426_1(FB842426|pid:none)
Length = 909

Score = 176 bits (447), Expect(2) = 5e-71
Identities = 93/202 (46%), Positives = 132/202 (65%), Gaps = 1/202 (0%)
Frame = +2

Query: 1133 QPEMVYLNIGSRPAKRIAAKSFGLEHLRAIPWVFSFSQNRLNLPVWLGIEDAILEAKTKG 1312
Q E+ YLNIGSRPAKR G+ +LRAIPWVF+++Q RL LP WLG+ + +A KG
Sbjct: 718 QAELGYLNIGSRPAKRRTTP--GISNLRAIPWVFAWTQTRLVLPAWLGVGRGLQDACDKG 775

Query: 1313 WGSDINEMYKEWPFFSSTIDLVEMVLLKTDPQISLRYNQMLV-PAQVQPLGIEMIDELTK 1489
++ MY+EWPFF ST+DL+EMV+ K D ++ Y+ +LV A + LG E+ EL +
Sbjct: 776 HTHELRAMYEEWPFFQSTVDLIEMVVAKADAPMAKHYDDVLVHDAGRRTLGAELRQELAR 835

Query: 1490 TTNAILELTKHKTLQQDNKILQHFVSIRRTFMDPINYIQVETLKRLRSTQKPDGTNDDAD 1669
T N +L ++ HK L +N+ L+ + R T+++P+N +QVE L+RLR DD +
Sbjct: 836 TENCVLAVSGHKKLSANNRSLRKLIDSRLTYLNPMNMLQVEVLRRLR--------QDDDN 887

Query: 1670 PILIDTLIITFNGISAGMKNTG 1735
L D L+IT NGI+AGM+NTG
Sbjct: 888 RKLRDALLITINGIAAGMRNTG 909

Score = 117 bits (292), Expect(2) = 5e-71
Identities = 60/148 (40%), Positives = 88/148 (59%), Gaps = 1/148 (0%)
Frame = +1

Query: 688 YC*NGGXXXXFMSCWELFKAQERLASLTEKFNVKLTLFHXXXXXXXXXXXNSHEGIMSQP 867
Y +G F + WEL+KAQE + + F +K+TLFH ++ I SQP
Sbjct: 570 YSDSGKDAGRFTAAWELYKAQEDVVAACNAFGIKVTLFHGRGGSIGRGGGPTYLAIQSQP 629

Query: 868 GGSLKSASTRVTIQGEMIDSHYGQIGASIRNFELFTTALLKQSLTPPPPPKQ-RWREIME 1044
GS+ + R T QGEM+ + +G S+R E++TTA+L +L PP PP+ +WR +ME
Sbjct: 630 PGSVMG-TLRSTEQGEMVQAKFGLPQTSVRQLEIYTTAVLLATLRPPQPPRDDKWRGVME 688

Query: 1045 QLSITSCKKYRSVVRENPSFIQYFRTST 1128
++S SC +YRS V ENP FI+YF+ +T
Sbjct: 689 EISRVSCAQYRSTVYENPEFIKYFQEAT 716

Score = 105 bits (262), Expect = 6e-21
Identities = 63/179 (35%), Positives = 105/179 (58%), Gaps = 2/179 (1%)
Frame = +2

Query: 176 EEIIKLVKTLILTQSPG-ERTTEFIEEYL-KKISNLSNTEALNVSRVLSHLLNLINVAEQ 349
E I L ++ + +S G E T +E+ L +++ +S ++L ++R SH LNL+ +A+
Sbjct: 45 ERITILAQSAVNMRSAGVEDTAVVVEKQLGAELAAMSLEDSLCLARAFSHHLNLMTIADT 104

Query: 350 HHLVRSVRESFLNNEDDLKYSCENTIQQLLNQGLDKESVYNALIQQKIELVLTAHPTQIM 529
+H VR R N DL SC++T +L+ G+ E +Y+ + +Q++E+VLTAHPTQI
Sbjct: 105 YHRVRKAR-----NFADLSKSCDDTFAKLIQSGVSPEELYDTVCKQEVEIVLTAHPTQIN 159

Query: 530 RRTIISKNSAMGEALSSLDNQQLTMFEREDYEKRLIREVGGSWLTDEVRRSKVTVEMEA 706
RRT+ K+ + L + L++ ++E + L+RE+ W TDE+RR K T EA
Sbjct: 160 RRTLQYKHLRIAHLLEFNERADLSLEDKEILIEDLVREITAIWQTDELRRHKPTPVDEA 218

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,730,859,696
Number of extensions: 52124466
Number of successful extensions: 161762
Number of sequences better than 10.0: 677
Number of HSP's gapped: 158930
Number of HSP's successfully gapped: 1607
Length of query: 621
Length of database: 1,040,966,779
Length adjustment: 135
Effective length of query: 486
Effective length of database: 608,388,304
Effective search space: 295676715744
Effective search space used: 295676715744
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 1.00 gvh: 0.49 alm: 0.38 top: 0.47 tms: 0.00 mit: 0.25 mip: 0.03
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: cytoplasmic
24.0 %: nuclear
12.0 %: extracellular, including cell wall
8.0 %: mitochondrial
4.0 %: vacuolar
4.0 %: vesicles of secretory system
4.0 %: endoplasmic reticulum

>> prediction for Contig-U11114-1 is cyt

VS (DIR, S) 1
VH (FL, L) 20
VF (FL, S) 0
AH (FL, L) 30
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 5
SF (FL, S) 0
CH (FL, L) 4
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0