>Contig-U11082-1 (Contig-U11082-1Q) /CSM_Contig/Contig-U11082-1Q.Seq.d
CACTGTTGGCCTACTGGNATTAATATTATTGTTTTTTTTTATAAATTAAT
TATTTTTATCTATTTCTTTAAGACAAATTATATAAATCAATTATATAAAT
AGATAATATAAAGAAAAATAGGAATAATAAAATAAATAAAAAAATAAAAT
AAAAAGATGTCAGCATTAACACAATCAGGATCAATAGAGAAACCATGTAC
AATTTTAATCAACTATGATAAAGGTGATCCACCACAAGTCAATGAATTCA
AACAAAACTTCGAACATGGTACAACTGAACAAAAGATTGAAACATTAAAA
AAGGTTATTCTCTATACAATCAATGGTGAACCAATTCCACAATTACTTAT
GCCAATCATTCTTTATGTTATGCCATCAAATGATCATACCATTAAAAAAC
TATTACTCATCTATTGGGAAGTAATTGAAAAAAACTCATCTTGGTAAATT
AAAATCCGAAATGATTTTAGTATGTAATTCATTATTAAATGATTTAAATC
ATCCAAATGAATTTGTACGTGGTAGTACATTAAGATTTTTATGTAAATTA
AGAGAAGCAGAAGTTTTAGAACCATTAGTCCCATCTGTTCGTTCAAACCT
TGAGAATAGACATGCATATTGTAGAAGAAATGCAGTTTTAGCAATCTATA
ATATCTATAGTCACTTTGATTATTTAATTCCAGATGCACCAGAATTAATT
TACAACTTTTTATTACAAGAAAAAGATGCATCATGTAAAAGAAATGCATT
TATTATGTTATTTAATTGTGCACCAGAAAAAGCTGTTGAATATCTTTCAT
CAGTTTTAGATGAAGTACCATCATTTGGTGATATGCTTCAATTTATTGTT
GTTGAATTAATTAGAAAAGTTTGTAAAACTTCACCATCAGAAAGATCAAA
ATATATTAAATGTATTTTTACATTATTAAATTCATCATCACCAGCAGTTA
AATATGAAAGTGCAGGTACATTATTATCATTATCATCAGCACCAACAGCA
GTACGTGGAGCAGCAAGTGCATATATTGATTTATTATGTAATGAAAGTGA
TAACAATGTAAAGATGATTGTATTGGATAAACTTATTGAAATCAAAAAGA
ATCATAGTAAGATTATGGAGGAGTTGGTTATGGATATTTTAAGAGCATTA
TCAAGTCCAAACATTGATATCTGTAAAAAGGTATTGAATATTGTTTTAGA
TTCAGTCACACCAAAGAATATCGATGAGATCATTTTGTTTTTAAAGAAAG
AGATCAACAAAACTCAATCCAAAGAATTTGATAAAGGTTTAGAGTATCGT
CATATTTTAATTCGTACCATTCATGTCTCCTCGTTGAAA----------T
CAAAGAAAGCCTTTGGTCCAGTCGATACAGAGGATGATTTAATTAAAGCA
GTTGGTAACACTGGTGAAGCCAATAAAGATCAAAATGAATACTCAAAGAT
CTCTCAATTGTCTGGTTTCTCTGATCCAATTTACGTCGAAGCTTACGTTA
GAGTTCATCAATATGATATCGTTTTGGATATCTCTGTGTTCAATCAAACC
AATGATACCCTTCAAAACGTTACATTGGAATTGGTCACTTTGGGTGACTT
GAAGATTTGCGAACGTGTCCCACCATTTACAATGGCTCCACGTGAAAAAA
CTTCAGCCAAAGCTTCAATCAAAGTCTCTTCAACTGATAATGGTGTAATT
ATGGGTACAATTGCTTTCGATATCGCTGGTTCCGTCAGTAGTATGTCTGA
TAAGAATTGTGTCATCCTTAATGAACTTCATATTGATGTTATCGATTATA
TTCTTCCAGCTAATCATCAATACACTGATGTTCTTTTCAGAAATCATTGG
CTCGAATTTGAATGGGAAAATAAAATACCAGTCAATACAAATATTACCGA
TTTAGTTAAATACGTTCATCACATTAGTAAAGTCACCAACATGGGTATCT
TAACACCAGAAGTTCATCTTTCAAATGATACTGGTATCCTCTCTGCTAAT
CTTTGTGCTAAAAGTGTTTTCGGTGAAGACGCACTTGCTAATATTTGTAT
TGAAAAACAAGCTGATGGTAAAATTTCTGGTTATATTAGAATTAGAGCTA
AAGTTCAATCAATTGCTGTTACATTAGGTGAAAAGATTGGTAATATGGGT
ATGAAAGCTTAAAAAAAAAAAAATTGCAATAAATAGTAAAAAGAATAATA
ATAATAATACAATTAAATTAAAAATCAATNGATATCATTGTAATGNGATT
TTAAA

est1=AHD247F,1,543
est2=SHF658F,2,156
est3=SHJ865F,2,604
est4=SHB531F,8,605
est5=AHF115F,15,600
est6=AHD120F,18,554
est7=AHP355F,18,515
est8=SHD203F,19,624
est9=VHP864F,19,624
est10=VHD732F,21,546
est11=AHE821F,24,620
est12=SHH135F,25,665
est13=VHM178F,25,553
est14=VHC463F,26,663
est15=VHN408F,26,603
est16=VHC701F,28,568
est17=VHG540F,28,624
est18=VHL265F,28,619
est19=VHM650F,28,659
est20=VHN554F,28,624
est21=AFO882F,37,702
est22=AHL266F,38,671
est23=SHF158F,41,673
est24=VHB891F,41,662
est25=VHC243F,41,572
est26=VHI801F,41,674
est27=VHA685F,43,627
est28=AHF848F,49,678
est29=AHC759F,55,669
est30=VHP390F,70,662
est31=AHP756F,88,549
est32=VHB841F,112,681
est33=AHA639F,154,765
est34=AHN773F,282,514
est35=VHE259F,314,939
est36=VHC457F,315,964
est37=VHO864F,346,945
est38=VHG654F,639,1194
est39=VHD551F,731,1284
est40=VFN710F,766,1339
est41=VHO864Z,1340,2117
est42=VHB891Z,1359,2119
est43=VHC701Z,1364,2119
est44=AHC759Z,1458,2118
est45=AHD247Z,1458,2118
est46=AHF471Z,1459,2118
est47=AHQ161Z,1459,2118
est48=VHC243Z,1459,2119
est49=VHP390Z,1459,2117
est50=SHF684Z,1460,2118
est51=VHA685Z,1460,2119
est52=AHA639Z,1461,2118
est53=AHF848Z,1461,2118
est54=AHL376Z,1461,2118
est55=VHL265Z,1461,2142
est56=VHM178Z,1461,2117
est57=VHE259Z,1462,2119
est58=VHM440Z,1462,2126
est59=VHB841Z,1467,2118
est60=VHG540Z,1477,2118
est61=SHH135Z,1481,2118
est62=AFO882Z,1524,2017
est63=VHM650Z,1540,2125
est64=VHG654Z,1557,2120
est65=AHP355Z,1572,2118
est66=SHB531Z,1587,2118
est67=AHP756Z,1598,2064
est68=AHN773Z,1674,2011
est69=SFE555Z,1740,2228
est70=VFE858Z,1824,2014
est71=SHF658Z,1876,2181
est72=AHD120Z,2123,2247
est73=VHI801Z,2138,2246
est74=SHJ865Z,2141,2243

tvgllxlillfffin*lflsislrqii*inyinr*ykek*e**nk*knkikrcqh*hnqd
q*rnhvqf*stmikvihhksmnsnktsnmvqlnkrlkh*krlfsiqsmvnqfhnylcqsf
fmlchqmiiplknyyssigk*LKKTHLGKLKSEMILVCNSLLNDLNHPNEFVRGSTLRFL
CKLREAEVLEPLVPSVRSNLENRHAYCRRNAVLAIYNIYSHFDYLIPDAPELIYNFLLQE
KDASCKRNAFIMLFNCAPEKAVEYLSSVLDEVPSFGDMLQFIVVELIRKVCKTSPSERSK
YIKCIFTLLNSSSPAVKYESAGTLLSLSSAPTAVRGAASAYIDLLCNESDNNVKMIVLDK
LIEIKKNHSKIMEELVMDILRALSSPNIDICKKVLNIVLDSVTPKNIDEIILFLKKEINK
TQSKEFDKGLEYRHILIRTIHVSSLK---

---SKKAFGPVDTEDDLIKAVGNTGEANKDQNEYSKISQLSGFSDPIYVEAYVRVHQYDI
VLDISVFNQTNDTLQNVTLELVTLGDLKICERVPPFTMAPREKTSAKASIKVSSTDNGVI
MGTIAFDIAGSVSSMSDKNCVILNELHIDVIDYILPANHQYTDVLFRNHWLEFEWENKIP
VNTNITDLVKYVHHISKVTNMGILTPEVHLSNDTGILSANLCAKSVFGEDALANICIEKQ
ADGKISGYIRIRAKVQSIAVTLGEKIGNMGMKA*kkkncnk**ke****yn*iknqxisl
*xdfk

Frame A:
hcwptginiivffykliifiyffktnyinqlyk*ii*rkigiik*ikk*nkkmsaltqsg
siekpctilinydkgdppqvnefkqnfehgtteqkietlkkvilytingepipqllmpii
lyvmpsndhtikkllliywevieknssw*ikirndfsm*fiik*fkssk*ictw*yikif
m*ikrsrsfrtispicsfkp*e*tcil*kkcsfsnl*yl*sl*lfnsrctrinlqlfitr
krcim*kkciyyvi*lctrksc*isfisfr*stiiw*yasiycc*in*ksl*nftirkik
iy*myfyiikfiitss*i*kcryiiiiiistnsstwsskciy*fim**k**qckddcig*
ty*nqkes**dyggvgygyfksiikskh*yl*kgieycfrfshtkeyr*dhfvfkerdqq
nsiqri**rfrvssyfnsyhscllve---

---SKKAFGPVDTEDDLIKAVGNTGEANKDQNEYSKISQLSGFSDPIYVEAYVRVHQYDI
VLDISVFNQTNDTLQNVTLELVTLGDLKICERVPPFTMAPREKTSAKASIKVSSTDNGVI
MGTIAFDIAGSVSSMSDKNCVILNELHIDVIDYILPANHQYTDVLFRNHWLEFEWENKIP
VNTNITDLVKYVHHISKVTNMGILTPEVHLSNDTGILSANLCAKSVFGEDALANICIEKQ
ADGKISGYIRIRAKVQSIAVTLGEKIGNMGMKA*kkkncnk**ke****yn*iknqxisl
*xdfk

Frame B:
tvgllxlillfffin*lflsislrqii*inyinr*ykek*e**nk*knkikrcqh*hnqd
q*rnhvqf*stmikvihhksmnsnktsnmvqlnkrlkh*krlfsiqsmvnqfhnylcqsf
fmlchqmiiplknyyssigk*LKKTHLGKLKSEMILVCNSLLNDLNHPNEFVRGSTLRFL
CKLREAEVLEPLVPSVRSNLENRHAYCRRNAVLAIYNIYSHFDYLIPDAPELIYNFLLQE
KDASCKRNAFIMLFNCAPEKAVEYLSSVLDEVPSFGDMLQFIVVELIRKVCKTSPSERSK
YIKCIFTLLNSSSPAVKYESAGTLLSLSSAPTAVRGAASAYIDLLCNESDNNVKMIVLDK
LIEIKKNHSKIMEELVMDILRALSSPNIDICKKVLNIVLDSVTPKNIDEIILFLKKEINK
TQSKEFDKGLEYRHILIRTIHVSSLK---

---qrkplvqsiqrmi*lkqlvtlvkpikikmntqrslnclvsliqftskltlefinmis
fwislcsikpmipfktlhwnwslwvt*rfanvshhlqwlhvkklqpklqskslqlimv*l
wvqllsislvpsvvclirivsslmnfilmlsiiffqliintlmffseiigsnlngkikyq
siqilpi*lntfitlvksptwvs*hqkfifqmilvssllifvlkvfsvkthllifvlknk
lmvkflvilelelkfnqlllh*vkrlviwv*klkkkkiainskknnnnntiklkinxyhc
nxil

Frame C:
llaywx*yycffl*inyfylfl*dklyksii*idnikknrnnkinkkik*kdvsintiri
nretmynfnql**r*sttsq*iqtklrtwyn*tkd*nikkgyslynqw*tnstityanhs
lcyaik*syh*ktithllgsn*kklilvn*npk*f*yvihy*mi*iiqmnlyvvvh*dfy
vn*ekqkf*nh*shlfvqtlridmhiveemqf*qsiisivtlii*fqmhqn*fttfyykk
kmhhvkemhllcylivhqkkllnifhqf*mkyhhlvicfnlllln*lekfvklhhqkdqn
ilnvflhy*ihhhqqlnmkvqvhyyhyhqhqqqyveqqvhiliyyvmkvitm*r*lywin
llkskriivrlwrswlwif*ehyqvqtlisvkry*ilf*iqshqrismrsfcf*rkrstk
lnpknlikv*sivif*fvpfmspr*---

---keslwssryrg*fn*ssw*hw*sq*rsk*ilkdlsivwfl*snlrrslr*sssi*yr
fgylcvqsnq*ypskryigighfg*ledlrtcptiyngst*knfsqsfnqslfn**wcny
gyncfryrwfrq*yv**elchp**tsy*cyrlysss*ssih*csfqkslari*mgk*nts
qykyyrfs*irssh**shqhgylntrsssfk*ywyplc*slc*kcfr*rrtc*yly*kts
*w*nfwly*n*s*ssinccyir*kdw*ygyeslkkkklq*ivkriiiiiqln*ksxdiiv
mxf*

Query= Contig-U11082-1 (Contig-U11082-1Q)
/CSM_Contig/Contig-U11082-1Q.Seq.d
         (2255 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U11082-1 (Contig-U11082-1Q) /CSM_Contig/Conti...  3874  0.0
Contig-U12922-1 (Contig-U12922-1Q) /CSM_Contig/Conti...    44  7e-04
Contig-U12301-1 (Contig-U12301-1Q) /CSM_Contig/Conti...    44  7e-04
Contig-U08024-1 (Contig-U08024-1Q) /CSM_Contig/Conti...    42  0.003
Contig-U12626-1 (Contig-U12626-1Q) /CSM_Contig/Conti...    40  0.010
Contig-U11796-1 (Contig-U11796-1Q) /CSM_Contig/Conti...    40  0.010
Contig-U10963-1 (Contig-U10963-1Q) /CSM_Contig/Conti...    40  0.010
Contig-U10382-1 (Contig-U10382-1Q) /CSM_Contig/Conti...    40  0.010
Contig-U10341-1 (Contig-U10341-1Q) /CSM_Contig/Conti...    40  0.010
Contig-U08163-1 (Contig-U08163-1Q) /CSM_Contig/Conti...    40  0.010

>Contig-U11082-1 (Contig-U11082-1Q) /CSM_Contig/Contig-U11082-1Q.Seq.d
          Length = 2255

 Score = 3874 bits (1954), Expect = 0.0
 Identities = 1998/2005 (99%)
 Strand = Plus / Plus

                                                                        
Query: 156  gatgtcagcattaacacaatcaggatcaatagagaaaccatgtacaattttaatcaacta 215
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156  gatgtcagcattaacacaatcaggatcaatagagaaaccatgtacaattttaatcaacta 215

                                                                        
Query: 216  tgataaaggtgatccaccacaagtcaatgaattcaaacaaaacttcgaacatggtacaac 275
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216  tgataaaggtgatccaccacaagtcaatgaattcaaacaaaacttcgaacatggtacaac 275

                                                                        
Query: 276  tgaacaaaagattgaaacattaaaaaaggttattctctatacaatcaatggtgaaccaat 335
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276  tgaacaaaagattgaaacattaaaaaaggttattctctatacaatcaatggtgaaccaat 335

                                                                        
Query: 336  tccacaattacttatgccaatcattctttatgttatgccatcaaatgatcataccattaa 395
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336  tccacaattacttatgccaatcattctttatgttatgccatcaaatgatcataccattaa 395

                                                                        
Query: 396  aaaactattactcatctattgggaagtaattgnnnnnnnctcatcttggtaaattaaaat 455
            ||||||||||||||||||||||||||||||||       |||||||||||||||||||||
Sbjct: 396  aaaactattactcatctattgggaagtaattgaaaaaaactcatcttggtaaattaaaat 455

                                                                        
Query: 456  ccgaaatgattttagtatgtaattcattattaaatgatttaaatcatccaaatgaatttg 515
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456  ccgaaatgattttagtatgtaattcattattaaatgatttaaatcatccaaatgaatttg 515

                                                                        
Query: 516  tacgtggtagtacattaagatttttatgtaaattaagagaagcagaagttttagaaccat 575
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516  tacgtggtagtacattaagatttttatgtaaattaagagaagcagaagttttagaaccat 575

                                                                        
Query: 576  tagtcccatctgttcgttcaaaccttgagaatagacatgcatattgtagaagaaatgcag 635
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576  tagtcccatctgttcgttcaaaccttgagaatagacatgcatattgtagaagaaatgcag 635

                                                                        
Query: 636  ttttagcaatctataatatctatagtcactttgattatttaattccagatgcaccagaat 695
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636  ttttagcaatctataatatctatagtcactttgattatttaattccagatgcaccagaat 695

                                                                        
Query: 696  taatttacaactttttattacaagaaaaagatgcatcatgtaaaagaaatgcatttatta 755
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696  taatttacaactttttattacaagaaaaagatgcatcatgtaaaagaaatgcatttatta 755

                                                                        
Query: 756  tgttatttaattgtgcaccagaaaaagctgttgaatatctttcatcagttttagatgaag 815
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756  tgttatttaattgtgcaccagaaaaagctgttgaatatctttcatcagttttagatgaag 815

                                                                        
Query: 816  taccatcatttggtgatatgcttcaatttattgttgttgaattaattagaaaagtttgta 875
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816  taccatcatttggtgatatgcttcaatttattgttgttgaattaattagaaaagtttgta 875

                                                                        
Query: 876  aaacttcaccatcagaaagatcaaaatatattaaatgtatttttacattattaaattcat 935
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876  aaacttcaccatcagaaagatcaaaatatattaaatgtatttttacattattaaattcat 935

                                                                        
Query: 936  catcaccagcagttaaatatgaaagtgcaggtacattattatcattatcatcagcaccaa 995
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936  catcaccagcagttaaatatgaaagtgcaggtacattattatcattatcatcagcaccaa 995

                                                                        
Query: 996  cagcagtacgtggagcagcaagtgcatatattgatttattatgtaatgaaagtgataaca 1055
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996  cagcagtacgtggagcagcaagtgcatatattgatttattatgtaatgaaagtgataaca 1055

                                                                        
Query: 1056 atgtaaagatgattgtattggataaacttattgaaatcaaaaagaatcatagtaagatta 1115
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 atgtaaagatgattgtattggataaacttattgaaatcaaaaagaatcatagtaagatta 1115

                                                                        
Query: 1116 tggaggagttggttatggatattttaagagcattatcaagtccaaacattgatatctgta 1175
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1116 tggaggagttggttatggatattttaagagcattatcaagtccaaacattgatatctgta 1175

                                                                        
Query: 1176 aaaaggtattgaatattgttttagattcagtcacaccaaagaatatcgatgagatcattt 1235
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1176 aaaaggtattgaatattgttttagattcagtcacaccaaagaatatcgatgagatcattt 1235

                                                                        
Query: 1236 tgtttttaaagaaagagatcaacaaaactcaatccaaagaatttgataaaggtttagagt 1295
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1236 tgtttttaaagaaagagatcaacaaaactcaatccaaagaatttgataaaggtttagagt 1295

                                                                        
Query: 1296 atcgtcatattttaattcgtaccattcatgtctcctcgttgaaannnnnnnnnntcaaag 1355
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1296 atcgtcatattttaattcgtaccattcatgtctcctcgttgaaannnnnnnnnntcaaag 1355

                                                                        
Query: 1356 aaagcctttggtccagtcgatacagaggatgatttaattaaagcagttggtaacactggt 1415
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1356 aaagcctttggtccagtcgatacagaggatgatttaattaaagcagttggtaacactggt 1415

                                                                        
Query: 1416 gaagccaataaagatcaaaatgaatactcaaagatctctcaattgtctggtttctctgat 1475
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1416 gaagccaataaagatcaaaatgaatactcaaagatctctcaattgtctggtttctctgat 1475

                                                                        
Query: 1476 ccaatttacgtcgaagcttacgttagagttcatcaatatgatatcgttttggatatctct 1535
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1476 ccaatttacgtcgaagcttacgttagagttcatcaatatgatatcgttttggatatctct 1535

                                                                        
Query: 1536 gtgttcaatcaaaccaatgatacccttcaaaacgttacattggaattggtcactttgggt 1595
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1536 gtgttcaatcaaaccaatgatacccttcaaaacgttacattggaattggtcactttgggt 1595

                                                                        
Query: 1596 gacttgaagatttgcgaacgtgtcccaccatttacaatggctccacgtgaaaaaacttca 1655
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1596 gacttgaagatttgcgaacgtgtcccaccatttacaatggctccacgtgaaaaaacttca 1655

                                                                        
Query: 1656 gccaaagcttcaatcaaagtctcttcaactgataatggtgtaattatgggtacaattgct 1715
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1656 gccaaagcttcaatcaaagtctcttcaactgataatggtgtaattatgggtacaattgct 1715

                                                                        
Query: 1716 ttcgatatcgctggttccgtcagtagtatgtctgataagaattgtgtcatccttaatgaa 1775
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1716 ttcgatatcgctggttccgtcagtagtatgtctgataagaattgtgtcatccttaatgaa 1775

                                                                        
Query: 1776 cttcatattgatgttatcgattatattcttccagctaatcatcaatacactgatgttctt 1835
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1776 cttcatattgatgttatcgattatattcttccagctaatcatcaatacactgatgttctt 1835

                                                                        
Query: 1836 ttcagaaatcattggctcgaatttgaatgggaaaataaaataccagtcaatacaaatatt 1895
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1836 ttcagaaatcattggctcgaatttgaatgggaaaataaaataccagtcaatacaaatatt 1895

                                                                        
Query: 1896 accgatttagttaaatacgttcatcacattagtaaagtcaccaacatgggtatcttaaca 1955
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1896 accgatttagttaaatacgttcatcacattagtaaagtcaccaacatgggtatcttaaca 1955

                                                                        
Query: 1956 ccagaagttcatctttcaaatgatactggtatcctctctgctaatctttgtgctaaaagt 2015
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1956 ccagaagttcatctttcaaatgatactggtatcctctctgctaatctttgtgctaaaagt 2015

                                                                        
Query: 2016 gttttcggtgaagacgcacttgctaatatttgtattgaaaaacaagctgatggtaaaatt 2075
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2016 gttttcggtgaagacgcacttgctaatatttgtattgaaaaacaagctgatggtaaaatt 2075

                                                                        
Query: 2076 tctggttatattagaattagagctaaagttcaatcaattgctgttacattaggtgaaaag 2135
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2076 tctggttatattagaattagagctaaagttcaatcaattgctgttacattaggtgaaaag 2135

                                     
Query: 2136 attggtaatatgggtatgaaagctt 2160
            |||||||||||||||||||||||||
Sbjct: 2136 attggtaatatgggtatgaaagctt 2160


 Score = 87.7 bits (44), Expect = 5e-17
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                      
Query: 1  cactgttggcctactggnattaatattattgnnnnnnnnnataaattaattatttttatc 60
          |||||||||||||||||||||||||||||||         ||||||||||||||||||||
Sbjct: 1  cactgttggcctactggnattaatattattgtttttttttataaattaattatttttatc 60

                        
Query: 61 tatttctttaagac 74
          ||||||||||||||
Sbjct: 61 tatttctttaagac 74


 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                          
Query: 2226 caatngatatcattgtaatgngattttaaa 2255
            ||||||||||||||||||||||||||||||
Sbjct: 2226 caatngatatcattgtaatgngattttaaa 2255


 Score = 30.2 bits (15), Expect = 9.9
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 1882 tcaatacaaatatta 1896
            |||||||||||||||
Sbjct: 2053 tcaatacaaatatta 2039


 Score = 30.2 bits (15), Expect = 9.9
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 2039 taatatttgtattga 2053
            |||||||||||||||
Sbjct: 1896 taatatttgtattga 1882


>Contig-U12922-1 (Contig-U12922-1Q) /CSM_Contig/Contig-U12922-1Q.Seq.d
          Length = 1530

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 2  actgttggcctactggnattaatattatt 30
          ||||||||||||||||||||| |||||||
Sbjct: 1  actgttggcctactggnattattattatt 29


>Contig-U12301-1 (Contig-U12301-1Q) /CSM_Contig/Contig-U12301-1Q.Seq.d
          Length = 1692

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 276  tgaacaaaagattgaaacatta 297
            ||||||||||||||||||||||
Sbjct: 999  tgaacaaaagattgaaacatta 1020


 Score = 32.2 bits (16), Expect = 2.5
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 2   actgttggcctactgg 17
           ||||||||||||||||
Sbjct: 519 actgttggcctactgg 534


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 33,162
Number of Sequences: 6905
Number of extensions: 33162
Number of successful extensions: 4053
Number of sequences better than 10.0: 775
length of query: 2255
length of database: 5,674,871
effective HSP length: 16
effective length of query: 2239
effective length of database: 5,564,391
effective search space: 12458671449
effective search space used: 12458671449
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U11082-1 (Contig-U11082-1Q) /CSM_Contig/Contig-U11082-1Q.Seq.d
         (2255 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AF247143) Dictyostelium discoideum beta-COP protein mRNA, c...  1786   0.0    2
(U62960) Dictyostelium discoideum CopB (copB) mRNA, partial ...  1608   0.0    1
(BJ445812) Dictyostelium discoideum cDNA clone:ddv60p16, 3' ...  1544   0.0    1
(BJ437617) Dictyostelium discoideum cDNA clone:ddv34f24, 3' ...  1507   0.0    1
(BJ437982) Dictyostelium discoideum cDNA clone:ddv36b01, 3' ...  1497   0.0    1
(BJ349719) Dictyostelium discoideum cDNA clone:dda37m12, 3' ...  1310   0.0    1
(BJ349461) Dictyostelium discoideum cDNA clone:dda36f15, 3' ...  1310   0.0    1
(BJ446142) Dictyostelium discoideum cDNA clone:ddv61d23, 3' ...  1308   0.0    1
(BJ357452) Dictyostelium discoideum cDNA clone:dda63i15, 3' ...  1308   0.0    1
(BJ350999) Dictyostelium discoideum cDNA clone:dda41n18, 3' ...  1308   0.0    1
(BJ436994) Dictyostelium discoideum cDNA clone:ddv32i22, 3' ...  1306   0.0    1
(BJ406601) Dictyostelium discoideum cDNA clone:dds35g22, 3' ...  1306   0.0    1
(BJ354504) Dictyostelium discoideum cDNA clone:dda53h19, 3' ...  1304   0.0    1
(BJ351225) Dictyostelium discoideum cDNA clone:dda42p12, 3' ...  1304   0.0    1
(BJ439136) Dictyostelium discoideum cDNA clone:ddv39e16, 3' ...  1302   0.0    1
(BJ437436) Dictyostelium discoideum cDNA clone:ddv34b12, 3' ...  1273   0.0    1
(BJ407355) Dictyostelium discoideum cDNA clone:dds38e09, 3' ...  1265   0.0    1
(BJ444288) Dictyostelium discoideum cDNA clone:ddv55k19, 3' ...  1203   0.0    2
(BJ348178) Dictyostelium discoideum cDNA clone:dda32m10, 3' ...  1203   0.0    2
(BJ443608) Dictyostelium discoideum cDNA clone:ddv53a18, 3' ...  1150   0.0    2
(BJ444164) Dictyostelium discoideum cDNA clone:ddv55p10, 3' ...  1148   0.0    3
(BJ417565) Dictyostelium discoideum cDNA clone:ddv28d03, 5' ...  1138   0.0    1
(BJ440691) Dictyostelium discoideum cDNA clone:ddv44o09, 3' ...  1118   0.0    2
(BJ440757) Dictyostelium discoideum cDNA clone:ddv44k14, 3' ...  1114   0.0    1
(BJ422041) Dictyostelium discoideum cDNA clone:ddv44k14, 5' ...  1102   0.0    1
(BJ420196) Dictyostelium discoideum cDNA clone:ddv38e13, 5' ...  1098   0.0    1
(BJ419249) Dictyostelium discoideum cDNA clone:ddv35b16, 5' ...  1053   0.0    2
(BJ426931) Dictyostelium discoideum cDNA clone:ddv60p16, 5' ...  1005   0.0    2
(BJ420513) Dictyostelium discoideum cDNA clone:ddv39e16, 5' ...  1003   0.0    2
(BJ444481) Dictyostelium discoideum cDNA clone:ddv56c14, 3' ...   948   0.0    4
(BJ356860) Dictyostelium discoideum cDNA clone:dda61n13, 3' ...   930   0.0    2
(BJ437761) Dictyostelium discoideum cDNA clone:ddv35e12, 3' ...   672   0.0    2
(BJ330690) Dictyostelium discoideum cDNA clone:dda32m10, 5' ...   638   0.0    2
(BJ329098) Dictyostelium discoideum cDNA clone:dda30d22, 5' ...   539   0.0    2
(BJ333369) Dictyostelium discoideum cDNA clone:dda42p12, 5' ...   539   0.0    2
(BJ418858) Dictyostelium discoideum cDNA clone:ddv34b12, 5' ...   539   0.0    2
(BJ404121) Dictyostelium discoideum cDNA clone:dds27m07, 3' ...  1001   0.0    1
(BJ336330) Dictyostelium discoideum cDNA clone:dda53c18, 5' ...   539   0.0    2
(BJ423079) Dictyostelium discoideum cDNA clone:ddv48b02, 5' ...   539   0.0    2
(BJ331662) Dictyostelium discoideum cDNA clone:dda36f15, 5' ...   539   0.0    2
(BJ394283) Dictyostelium discoideum cDNA clone:dds34c15, 5' ...   539   0.0    2
(BJ419305) Dictyostelium discoideum cDNA clone:ddv35n16, 5' ...   539   0.0    2
(BJ395278) Dictyostelium discoideum cDNA clone:dds38e09, 5' ...   537   0.0    2
(BJ419033) Dictyostelium discoideum cDNA clone:ddv34f24, 5' ...   539   0.0    2
(BJ427244) Dictyostelium discoideum cDNA clone:ddv61d23, 5' ...   539   0.0    2
(BJ425684) Dictyostelium discoideum cDNA clone:ddv56c14, 5' ...   539   0.0    2
(BJ418467) Dictyostelium discoideum cDNA clone:ddv32i22, 5' ...   539   0.0    2
(BJ427531) Dictyostelium discoideum cDNA clone:ddv62p16, 5' ...   539   0.0    2
(BJ421981) Dictyostelium discoideum cDNA clone:ddv44o09, 5' ...   539   0.0    2
(BJ332865) Dictyostelium discoideum cDNA clone:dda40j06, 5' ...   539   0.0    2
(BJ426333) Dictyostelium discoideum cDNA clone:ddv58k13, 5' ...   539   0.0    2
(BJ393083) Dictyostelium discoideum cDNA clone:dds30e02, 5' ...   533   0.0    2
(BJ424760) Dictyostelium discoideum cDNA clone:ddv53a18, 5' ...   539   0.0    2
(BJ396667) Dictyostelium discoideum cDNA clone:dds43b18, 5' ...   537   0.0    3
(BJ357179) Dictyostelium discoideum cDNA clone:dda62p13, 3' ...   864   0.0    1
(BJ333009) Dictyostelium discoideum cDNA clone:dda41m03, 5' ...   539   0.0    2
(BJ426116) Dictyostelium discoideum cDNA clone:ddv57p02, 5' ...   539   0.0    2
(BJ392373) Dictyostelium discoideum cDNA clone:dds27m07, 5' ...   539   0.0    3
(BJ419184) Dictyostelium discoideum cDNA clone:ddv35e12, 5' ...   539   0.0    2
(BJ346394) Dictyostelium discoideum cDNA clone:dda30d22, 3' ...   789   0.0    1
(BJ419400) Dictyostelium discoideum cDNA clone:ddv36b01, 5' ...   539   0.0    2
(BJ425489) Dictyostelium discoideum cDNA clone:ddv55k19, 5' ...   539   0.0    2
(BJ338714) Dictyostelium discoideum cDNA clone:dda62p13, 5' ...   539   0.0    2
(BJ332066) Dictyostelium discoideum cDNA clone:dda37g05, 5' ...   539   0.0    2
(BJ331886) Dictyostelium discoideum cDNA clone:dda37m12, 5' ...   539   0.0    3
(BJ420170) Dictyostelium discoideum cDNA clone:ddv38p07, 5' ...   539   0.0    2
(BJ355947) Dictyostelium discoideum cDNA clone:dda58b19, 3' ...   654   0.0    1
(BJ338478) Dictyostelium discoideum cDNA clone:dda61n13, 5' ...   515   e-180  2
(BJ398026) Dictyostelium discoideum cDNA clone:dds10m13, 3' ...   527   e-145  1
(BJ406510) Dictyostelium discoideum cDNA clone:dds35c16, 3' ...   381   e-101  1
(BJ339620) Dictyostelium discoideum cDNA clone:dda58b19, 5' ...   270   2e-99  2
(BJ428033) Dictyostelium discoideum cDNA clone:ddv10d16, 3' ...   248   8e-61  1
(EC825794) SME00007153 esmbsro2 Sawyeria marylandensis cDNA,...    60   3e-20  4
(AB261041) Entamoeba histolytica gene for beta1-COP, complet...    52   1e-08  4
(X57228) Rat mRNA for beta COP.                                    44   3e-08  4
(DD317446) Primary Rat Hepatocyte Toxicity Modeling.               44   3e-08  4
(DD270496) Molecular Hepatotoxicology Modeling.                    44   3e-08  4
(BC061882) Rattus norvegicus coatomer protein complex, subun...    44   3e-08  4
(DY890578) CeleSEQ9632 Cunninghamella elegans pBluescript (E...    56   4e-08  3
(DY892567) CeleSEQ11131 Cunninghamella elegans pBluescript (...    56   4e-08  3
(BC126502) Bos taurus coatomer protein complex, subunit beta...    48   4e-08  5
(DY894270) CeleSEQ13804 Cunninghamella elegans pBluescript (...    56   5e-08  3
(DY892831) CeleSEQ11848 Cunninghamella elegans pBluescript (...    56   2e-07  3
(EL569893) Physarum09077 Physarum polycephalum starvation st...    66   4e-07  2
(EX354877) GQ03115.B7_M07 GQ031 - Xylem Scrapings (Normalize...    46   6e-07  3
(DV977319) GQ00610.B3.1_L03 GQ006: Cambium and phloem from m...    46   3e-05  3
(EX317058) GQ02811.B7_D08 GQ028 - Cambium / phloem scrapping...    46   3e-05  3
(EX312195) GQ02804.B7_A02 GQ028 - Cambium / phloem scrapping...    46   3e-05  3
(EX313127) GQ02805.B7_M12 GQ028 - Cambium / phloem scrapping...    46   3e-05  3
(EX353066) GQ03112.B7_M07 GQ031 - Xylem Scrapings (Normalize...    46   3e-05  3
(DR569740) WS02625.BR_J06 WS-PP-N-A-12 Picea glauca cDNA clo...    46   3e-05  3
(EX357278) GQ03122.B7_E14 GQ031 - Xylem Scrapings (Normalize...    46   3e-05  3
(EX317077) GQ02811.B7_E03 GQ028 - Cambium / phloem scrapping...    46   3e-05  3
(DV872558) LB02518.CR_E23 GC_BGC-25 Bos taurus cDNA clone IM...    48   8e-05  3
(AF231925) Mus musculus COPI coatomer complex, beta subunit ...    44   1e-04  3
(EH208923) LB02752.CR_I05 GC_BGC-27 Bos taurus cDNA clone IM...    48   1e-04  3
(AK172214) Mus musculus activated spleen cDNA, RIKEN full-le...    44   1e-04  3
(DY491803) sh2P0004D15_F.ab1 adult sheep fracture callus 7d ...    48   1e-04  3
(AK135168) Mus musculus 12 days embryo female ovary cDNA, RI...    44   1e-04  3
(DV818562) LB01726.CR_G15 GC_BGC-17 Bos taurus cDNA clone IM...    48   1e-04  3

>(AF247143) Dictyostelium discoideum beta-COP protein mRNA, complete
            cds.
          Length = 2739

 Score = 1786 bits (901), Expect(2) = 0.0
 Identities = 904/905 (99%)
 Strand = Plus / Plus


Query: 435  ctcatcttggtaaattaaaatccgaaatgattttagtatgtaattcattattaaatgatt 494
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278  ctcatcttggtaaattaaaatccgaaatgattttagtatgtaattcattattaaatgatt 337


Query: 495  taaatcatccaaatgaatttgtacgtggtagtacattaagatttttatgtaaattaagag 554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338  taaatcatccaaatgaatttgtacgtggtagtacattaagatttttatgtaaattaagag 397


Query: 555  aagcagaagttttagaaccattagtcccatctgttcgttcaaaccttgagaatagacatg 614
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398  aagcagaagttttagaaccattagtcccatctgttcgttcaaaccttgagaatagacatg 457


Query: 615  catattgtagaagaaatgcagttttagcaatctataatatctatagtcactttgattatt 674
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 458  catattgtagaagaaatgcagttttggcaatctataatatctatagtcactttgattatt 517


Query: 675  taattccagatgcaccagaattaatttacaactttttattacaagaaaaagatgcatcat 734
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518  taattccagatgcaccagaattaatttacaactttttattacaagaaaaagatgcatcat 577


Query: 735  gtaaaagaaatgcatttattatgttatttaattgtgcaccagaaaaagctgttgaatatc 794
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578  gtaaaagaaatgcatttattatgttatttaattgtgcaccagaaaaagctgttgaatatc 637


Query: 795  tttcatcagttttagatgaagtaccatcatttggtgatatgcttcaatttattgttgttg 854
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638  tttcatcagttttagatgaagtaccatcatttggtgatatgcttcaatttattgttgttg 697


Query: 855  aattaattagaaaagtttgtaaaacttcaccatcagaaagatcaaaatatattaaatgta 914
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698  aattaattagaaaagtttgtaaaacttcaccatcagaaagatcaaaatatattaaatgta 757


Query: 915  tttttacattattaaattcatcatcaccagcagttaaatatgaaagtgcaggtacattat 974
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758  tttttacattattaaattcatcatcaccagcagttaaatatgaaagtgcaggtacattat 817


Query: 975  tatcattatcatcagcaccaacagcagtacgtggagcagcaagtgcatatattgatttat 1034
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818  tatcattatcatcagcaccaacagcagtacgtggagcagcaagtgcatatattgatttat 877


Query: 1035 tatgtaatgaaagtgataacaatgtaaagatgattgtattggataaacttattgaaatca 1094
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878  tatgtaatgaaagtgataacaatgtaaagatgattgtattggataaacttattgaaatca 937


Query: 1095 aaaagaatcatagtaagattatggaggagttggttatggatattttaagagcattatcaa 1154
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938  aaaagaatcatagtaagattatggaggagttggttatggatattttaagagcattatcaa 997


Query: 1155 gtccaaacattgatatctgtaaaaaggtattgaatattgttttagattcagtcacaccaa 1214
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998  gtccaaacattgatatctgtaaaaaggtattgaatattgttttagattcagtcacaccaa 1057


Query: 1215 agaatatcgatgagatcattttgtttttaaagaaagagatcaacaaaactcaatccaaag 1274
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1058 agaatatcgatgagatcattttgtttttaaagaaagagatcaacaaaactcaatccaaag 1117


Query: 1275 aatttgataaaggtttagagtatcgtcatattttaattcgtaccattcatgtctcctcgt 1334
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1118 aatttgataaaggtttagagtatcgtcatattttaattcgtaccattcatgtctcctcgt 1177


Query: 1335 tgaaa 1339
            |||||
Sbjct: 1178 tgaaa 1182

 Score = 1608 bits (811), Expect = 0.0
 Identities = 811/811 (100%)
 Strand = Plus / Plus


Query: 1350 tcaaagaaagcctttggtccagtcgatacagaggatgatttaattaaagcagttggtaac 1409
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1927 tcaaagaaagcctttggtccagtcgatacagaggatgatttaattaaagcagttggtaac 1986


Query: 1410 actggtgaagccaataaagatcaaaatgaatactcaaagatctctcaattgtctggtttc 1469
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1987 actggtgaagccaataaagatcaaaatgaatactcaaagatctctcaattgtctggtttc 2046


Query: 1470 tctgatccaatttacgtcgaagcttacgttagagttcatcaatatgatatcgttttggat 1529
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2047 tctgatccaatttacgtcgaagcttacgttagagttcatcaatatgatatcgttttggat 2106


Query: 1530 atctctgtgttcaatcaaaccaatgatacccttcaaaacgttacattggaattggtcact 1589
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2107 atctctgtgttcaatcaaaccaatgatacccttcaaaacgttacattggaattggtcact 2166


Query: 1590 ttgggtgacttgaagatttgcgaacgtgtcccaccatttacaatggctccacgtgaaaaa 1649
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2167 ttgggtgacttgaagatttgcgaacgtgtcccaccatttacaatggctccacgtgaaaaa 2226


Query: 1650 acttcagccaaagcttcaatcaaagtctcttcaactgataatggtgtaattatgggtaca 1709
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2227 acttcagccaaagcttcaatcaaagtctcttcaactgataatggtgtaattatgggtaca 2286


Query: 1710 attgctttcgatatcgctggttccgtcagtagtatgtctgataagaattgtgtcatcctt 1769
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2287 attgctttcgatatcgctggttccgtcagtagtatgtctgataagaattgtgtcatcctt 2346


Query: 1770 aatgaacttcatattgatgttatcgattatattcttccagctaatcatcaatacactgat 1829
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2347 aatgaacttcatattgatgttatcgattatattcttccagctaatcatcaatacactgat 2406


Query: 1830 gttcttttcagaaatcattggctcgaatttgaatgggaaaataaaataccagtcaataca 1889
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2407 gttcttttcagaaatcattggctcgaatttgaatgggaaaataaaataccagtcaataca 2466


Query: 1890 aatattaccgatttagttaaatacgttcatcacattagtaaagtcaccaacatgggtatc 1949
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2467 aatattaccgatttagttaaatacgttcatcacattagtaaagtcaccaacatgggtatc 2526


Query: 1950 ttaacaccagaagttcatctttcaaatgatactggtatcctctctgctaatctttgtgct 2009
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2527 ttaacaccagaagttcatctttcaaatgatactggtatcctctctgctaatctttgtgct 2586


Query: 2010 aaaagtgttttcggtgaagacgcacttgctaatatttgtattgaaaaacaagctgatggt 2069
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2587 aaaagtgttttcggtgaagacgcacttgctaatatttgtattgaaaaacaagctgatggt 2646


Query: 2070 aaaatttctggttatattagaattagagctaaagttcaatcaattgctgttacattaggt 2129
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2647 aaaatttctggttatattagaattagagctaaagttcaatcaattgctgttacattaggt 2706


Query: 2130 gaaaagattggtaatatgggtatgaaagctt 2160
            |||||||||||||||||||||||||||||||
Sbjct: 2707 gaaaagattggtaatatgggtatgaaagctt 2737

 Score =  537 bits (271), Expect(2) = 0.0
 Identities = 271/271 (100%)
 Strand = Plus / Plus


Query: 157 atgtcagcattaacacaatcaggatcaatagagaaaccatgtacaattttaatcaactat 216
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgtcagcattaacacaatcaggatcaatagagaaaccatgtacaattttaatcaactat 60


Query: 217 gataaaggtgatccaccacaagtcaatgaattcaaacaaaacttcgaacatggtacaact 276
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gataaaggtgatccaccacaagtcaatgaattcaaacaaaacttcgaacatggtacaact 120


Query: 277 gaacaaaagattgaaacattaaaaaaggttattctctatacaatcaatggtgaaccaatt 336
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaacaaaagattgaaacattaaaaaaggttattctctatacaatcaatggtgaaccaatt 180


Query: 337 ccacaattacttatgccaatcattctttatgttatgccatcaaatgatcataccattaaa 396
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccacaattacttatgccaatcattctttatgttatgccatcaaatgatcataccattaaa 240


Query: 397 aaactattactcatctattgggaagtaattg 427
           |||||||||||||||||||||||||||||||
Sbjct: 241 aaactattactcatctattgggaagtaattg 271

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,514,711,807
Number of extensions: 149252646
Number of successful extensions: 12037329
Number of sequences better than 10.0: 338
Length of query: 2255
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 2231
Effective length of database: 97,308,875,965
Effective search space: 217096102277915
Effective search space used: 217096102277915
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

Query= Contig-U11082-1 (Contig-U11082-1Q) /CSM_Contig/Contig-U11082-1Q.Seq.d
         (2255 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q23924) RecName: Full=Coatomer subunit beta; AltName: Full=Beta...   578   0.0
U62960_1(U62960|pid:none) Dictyostelium discoideum CopB (copB) m...   520   e-146
AF084457_1(AF084457|pid:none) Homo sapiens beta-cop homolog mRNA...   372   e-119
(Q9JIF7) RecName: Full=Coatomer subunit beta; AltName: Full=Beta...   372   e-119
AK161544_1(AK161544|pid:none) Mus musculus adult male pituitary ...   372   e-119
(Q5R922) RecName: Full=Coatomer subunit beta; AltName: Full=Beta...   370   e-118
BT070792_1(BT070792|pid:none) Picea sitchensis clone WS02750_E10...   352   e-118
(P23514) RecName: Full=Coatomer subunit beta; AltName: Full=Beta...   370   e-118
BC081657_1(BC081657|pid:none) Danio rerio coatomer protein compl...   369   e-118
AY294010_1(AY294010|pid:none) Danio rerio coatomer protein compl...   369   e-118
BC168594_1(BC168594|pid:none) Xenopus tropicalis cDNA clone MGC:...   369   e-117
BC100179_1(BC100179|pid:none) Xenopus laevis hypothetical protei...   368   e-117
BC073438_1(BC073438|pid:none) Xenopus laevis MGC80934 protein, m...   367   e-117
BT045694_1(BT045694|pid:none) Salmo salar clone ssal-rgf-528-379...   364   e-116
AL080283_6(AL080283|pid:none) Arabidopsis thaliana DNA chromosom...   341   e-113
(Q9SV20) RecName: Full=Coatomer subunit beta-2; AltName: Full=Be...   341   e-113
AF125459_7(AF125459|pid:none) Caenorhabditis elegans cosmid Y25C...   361   e-113
FJ629580_1(FJ629580|pid:none) Synthetic construct Drosophila mel...   353   e-113
(P45437) RecName: Full=Coatomer subunit beta; AltName: Full=Beta...   353   e-113
(Q9SV21) RecName: Full=Coatomer subunit beta-1; AltName: Full=Be...   337   e-112
L31852_1(L31852|pid:none) Drosophila melanogaster (bcop) gene, c...   345   e-110
AP008217_366(AP008217|pid:none) Oryza sativa (japonica cultivar-...   321   e-108
AP002862_22(AP002862|pid:none) Oryza sativa Japonica Group genom...   327   e-108
(Q53PC7) RecName: Full=Coatomer subunit beta-1; AltName: Full=Be...   321   e-107
AB080596_1(AB080596|pid:none) Botryococcus braunii bCOP mRNA for...   329   e-104
CP001325_660(CP001325|pid:none) Micromonas sp. RCC299 chromosome...   317   e-101
FN314202_1(FN314202|pid:none) Schistosoma japonicum isolate Anhu...   320   e-100
FN357297_14(FN357297|pid:none) Schistosoma mansoni genome sequen...   320   e-100
AE017347_289(AE017347|pid:none) Cryptococcus neoformans var. neo...   312   3e-99
CU638744_549(CU638744|pid:none) Podospora anserina genomic DNA c...   300   5e-94
CR954204_280(CR954204|pid:none) Ostreococcus tauri strain OTTH05...   283   2e-91
AM920428_1355(AM920428|pid:none) Penicillium chrysogenum Wiscons...   287   2e-90
CR382132_796(CR382132|pid:none) Yarrowia lipolytica strain CLIB1...   283   5e-88
CR382138_832(CR382138|pid:none) Debaryomyces hansenii strain CBS...   271   2e-85
CP000502_178(CP000502|pid:none) Pichia stipitis CBS 6054 chromos...   265   5e-85
BT069342_1(BT069342|pid:none) Zea mays full-length cDNA clone ZM...   303   1e-80
AY811658_1(AY811658|pid:none) Schistosoma japonicum SJCHGC04385 ...   247   6e-78
CR382123_662(CR382123|pid:none) Kluyveromyces lactis strain NRRL...   245   2e-77
(P41810) RecName: Full=Coatomer subunit beta; AltName: Full=Beta...   243   6e-77
U11236_1(U11236|pid:none) Saccharomyces cerevisiae beta COP (sec...   243   6e-77
CR380957_471(CR380957|pid:none) Candida glabrata strain CBS138 c...   242   1e-76
CU928169_449(CU928169|pid:none) Kluyveromyces thermotolerans str...   242   2e-76
(Q9UUF7) RecName: Full=Coatomer subunit beta; AltName: Full=Beta...   236   2e-72
AL031854_1(AL031854|pid:none) S.pombe chromosome II cosmid c337.      236   2e-72
CT005259_134(CT005259|pid:none) Leishmania major strain Friedlin...   221   4e-68
DQ334191_1(DQ334191|pid:none) Drosophila miranda CG6223 gene, pa...   201   7e-50
AB261041_1(AB261041|pid:none) Entamoeba histolytica gene for bet...   187   1e-45
AB261043_1(AB261043|pid:none) Entamoeba histolytica gene for bet...   179   4e-43
AE014187_275(AE014187|pid:none) Plasmodium falciparum 3D7 chromo...   156   3e-36
BT084339_1(BT084339|pid:none) Zea mays full-length cDNA clone ZM...   152   4e-35
CR940347_545(CR940347|pid:none) Theileria annulata strain Ankara...   137   1e-33
EF215135_1(EF215135|pid:none) Callithrix jacchus clone N04-52.4_...   147   2e-33
DQ897406_1(DQ897406|pid:none) Caenorhabditis remanei strain PB20...   133   3e-29
DQ897405_1(DQ897405|pid:none) Caenorhabditis remanei strain PB20...   132   7e-29
DQ897401_1(DQ897401|pid:none) Caenorhabditis remanei strain CR10...   132   7e-29
AY815332_1(AY815332|pid:none) Schistosoma japonicum SJCHGC04770 ...   109   4e-22
DQ632004_1(DQ632004|pid:none) Caenorhabditis briggsae strain VT8...   104   2e-20
AC154090_10(AC154090|pid:none) Medicago truncatula clone mth2-92...    96   6e-18
AX884940_1(AX884940|pid:none) Sequence 803 from Patent EP1033401...    80   2e-13
AY193845_1(AY193845|pid:none) Spironucleus barkhanus coatomer-li...    54   1e-09
EU956640_1(EU956640|pid:none) Zea mays clone 1568667 AP-1 comple...    68   2e-09
BC154680_1(BC154680|pid:none) Xenopus tropicalis adaptor-related...    67   4e-09
BC080909_1(BC080909|pid:none) Xenopus tropicalis adaptor-related...    67   4e-09
BC005142_1(BC005142|pid:none) Homo sapiens adaptor-related prote...    65   8e-09
AC005545_3(AC005545|pid:none) Homo sapiens chromosome 19, cosmid...    65   8e-09
AK141789_1(AK141789|pid:none) Mus musculus 9 days embryo whole b...    65   8e-09
AF130042_1(AF130042|pid:none) Homo sapiens clone FLB0124 PRO0039...    65   8e-09
AK155518_1(AK155518|pid:none) Mus musculus NOD-derived CD11c +ve...    65   8e-09
AB384738_1(AB384738|pid:none) Synthetic construct DNA, clone: pF...    65   8e-09
(O54774) RecName: Full=AP-3 complex subunit delta-1; AltName: Fu...    65   8e-09
(O14617) RecName: Full=AP-3 complex subunit delta-1; AltName: Fu...    65   8e-09
BC037477_1(BC037477|pid:none) Mus musculus adaptor-related prote...    65   8e-09
AM269955_67(AM269955|pid:none) Aspergillus niger contig An01c008...    64   2e-08
BC010065_1(BC010065|pid:none) Homo sapiens adaptor-related prote...    64   2e-08
F88101(F88101)protein W09G10.4 [imported] - Caenorhabditis elegans     64   2e-08
AF016671_5(AF016671|pid:none) Caenorhabditis elegans cosmid W09G...    64   2e-08
AB015979_1(AB015979|pid:none) Bos taurus mRNA for adaptor relate...    64   3e-08
AF002164_1(AF002164|pid:none) Drosophila melanogaster AP-3 delta...    62   9e-08
BT011188_1(BT011188|pid:none) Drosophila melanogaster RE06749 fu...    62   9e-08
AE014298_2035(AE014298|pid:none) Drosophila melanogaster chromos...    62   9e-08
AP008208_2858(AP008208|pid:none) Oryza sativa (japonica cultivar...    60   4e-07
AC069158_21(AC069158|pid:none) Genomic Sequence for Oryza sativa...    60   4e-07
AJ133777_1(AJ133777|pid:none) Arabidopsis thaliana mRNA for gamm...    59   1e-06
BT004307_1(BT004307|pid:none) Arabidopsis thaliana clone RAFL16-...    59   1e-06
AM920428_179(AM920428|pid:none) Penicillium chrysogenum Wisconsi...    59   1e-06
AC002423_7(AC002423|pid:none) Genomic sequence for Arabidopsis t...    59   1e-06
AC154090_9(AC154090|pid:none) Medicago truncatula clone mth2-92k...    57   2e-06
AM910984_149(AM910984|pid:none) Plasmodium knowlesi strain H chr...    45   3e-06
CR382139_65(CR382139|pid:none) Debaryomyces hansenii strain CBS7...    57   4e-06
(Q54R84) RecName: Full=AP-4 complex subunit beta; AltName: Full=...    46   6e-06
CP001330_100(CP001330|pid:none) Micromonas sp. RCC299 chromosome...    56   6e-06
FM992695_250(FM992695|pid:none) Candida dubliniensis CD36 chromo...    54   2e-05
AE017341_195(AE017341|pid:none) Cryptococcus neoformans var. neo...    54   3e-05
CR382132_5(CR382132|pid:none) Yarrowia lipolytica strain CLIB122...    53   4e-05
CP000584_399(CP000584|pid:none) Ostreococcus lucimarinus CCE9901...    53   4e-05
AC134521_1(AC134521|pid:none) Medicago truncatula clone mth2-31k...    53   5e-05
AX179659_1(AX179659|pid:none) Sequence 3 from Patent WO0146423. ...    52   7e-05
CR382134_483(CR382134|pid:none) Debaryomyces hansenii strain CBS...    52   9e-05
AC005966_12(AC005966|pid:none) Arabidopsis thaliana chromosome 1...    52   9e-05
AE014298_1328(AE014298|pid:none) Drosophila melanogaster chromos...    52   1e-04
BC045070_1(BC045070|pid:none) Xenopus laevis similar to adaptor ...    52   1e-04
(O43747) RecName: Full=AP-1 complex subunit gamma-1; AltName: Fu...    52   1e-04
BT023757_1(BT023757|pid:none) Drosophila melanogaster RE56180 fu...    52   1e-04
(P22892) RecName: Full=AP-1 complex subunit gamma-1; AltName: Fu...    52   1e-04
BC073198_1(BC073198|pid:none) Xenopus laevis similar to adaptor ...    52   1e-04
AC073555_7(AC073555|pid:none) Arabidopsis thaliana chromosome 1 ...    52   1e-04
AK145821_1(AK145821|pid:none) Mus musculus 14 days pregnant adul...    52   1e-04
BC036283_1(BC036283|pid:none) Homo sapiens adaptor-related prote...    51   2e-04
AK036387_1(AK036387|pid:none) Mus musculus adult male bone cDNA,...    51   2e-04
Y12226_1(Y12226|pid:none) H.sapiens mRNA for gamma-adaptin.            51   2e-04
AM463501_1(AM463501|pid:none) Vitis vinifera contig VV78X085385....    51   2e-04
AC159455_21(AC159455|pid:none) Trypanosoma brucei chromosome 5 c...    51   2e-04
BC047823_1(BC047823|pid:none) Danio rerio adaptor-related protei...    51   2e-04
BC135628_1(BC135628|pid:none) Xenopus tropicalis adaptor-related...    50   3e-04
CR382125_533(CR382125|pid:none) Kluyveromyces lactis strain NRRL...    50   3e-04
(Q5R5M2) RecName: Full=AP-1 complex subunit gamma-1; AltName: Fu...    50   4e-04
AK022934_1(AK022934|pid:none) Homo sapiens cDNA FLJ12872 fis, cl...    50   4e-04
AC146746_8(AC146746|pid:none) Medicago truncatula clone mth2-108...    50   4e-04
FN357358_10(FN357358|pid:none) Schistosoma mansoni genome sequen...    50   4e-04
AF216385_1(AF216385|pid:none) Arabidopsis thaliana beta-adaptin-...    49   6e-04
(Q99128) RecName: Full=AP-1 complex subunit gamma-1; AltName: Fu...    49   6e-04
CR382128_855(CR382128|pid:none) Yarrowia lipolytica strain CLIB1...    49   8e-04
(Q9UBF2) RecName: Full=Coatomer subunit gamma-2; AltName: Full=G...    49   8e-04
EU971310_1(EU971310|pid:none) Zea mays clone 361891 adaptin N te...    49   8e-04
BC110796_1(BC110796|pid:none) Homo sapiens coatomer protein comp...    49   8e-04
BC061661_1(BC061661|pid:none) Xenopus laevis hypothetical protei...    49   8e-04
AK151844_1(AK151844|pid:none) Mus musculus bone marrow macrophag...    49   0.001
AK147177_1(AK147177|pid:none) Mus musculus 16 days embryo kidney...    49   0.001
S49876(S49876) gamma-adaptin - smut fungus (Ustilago maydis)  &Z...    48   0.001
BT067720_1(BT067720|pid:none) Zea mays full-length cDNA clone ZM...    48   0.002
CP000393_1567(CP000393|pid:none) Trichodesmium erythraeum IMS101...    48   0.002
CP000497_69(CP000497|pid:none) Pichia stipitis CBS 6054 chromoso...    47   0.002
AK088492_1(AK088492|pid:none) Mus musculus 2 days neonate thymus...    47   0.003
(Q9QXK3) RecName: Full=Coatomer subunit gamma-2; AltName: Full=G...    47   0.003
AB385090_1(AB385090|pid:none) Synthetic construct DNA, clone: pF...    47   0.003
BT055935_1(BT055935|pid:none) Zea mays full-length cDNA clone ZM...    47   0.003
AB209817_1(AB209817|pid:none) Homo sapiens mRNA for adaptor-rela...    47   0.003
AK314641_1(AK314641|pid:none) Homo sapiens cDNA, FLJ95484, highl...    47   0.003
(A2VE21) RecName: Full=Coatomer subunit gamma-2; AltName: Full=G...    47   0.004
BT045480_1(BT045480|pid:none) Salmo salar clone ssal-rgf-522-272...    46   0.005
(Q9I8E6) RecName: Full=Coatomer subunit gamma-2; AltName: Full=G...    46   0.007
FN392320_570(FN392320|pid:none) Pichia pastoris GS115 chromosome...    46   0.007
CU210953_4(CU210953|pid:none) Mouse DNA sequence from clone DN-3...    46   0.007
BC054092_1(BC054092|pid:none) Mus musculus adaptor-related prote...    46   0.007
CU210953_5(CU210953|pid:none) Mouse DNA sequence from clone DN-3...    46   0.007
AP007160_1(AP007160|pid:none) Aspergillus oryzae RIB40 genomic D...    45   0.009
AK001724_1(AK001724|pid:none) Homo sapiens cDNA FLJ10862 fis, cl...    45   0.011
AB172937_1(AB172937|pid:none) Macaca fascicularis brain cDNA clo...    45   0.011
CP001141_67(CP001141|pid:none) Phaeodactylum tricornutum CCAP 10...    45   0.011
(Q9Y678) RecName: Full=Coatomer subunit gamma; AltName: Full=Gam...    45   0.011
BC056200_1(BC056200|pid:none) Mus musculus adaptor-related prote...    45   0.011
CR857717_1(CR857717|pid:none) Pongo abelii mRNA; cDNA DKFZp459E0...    45   0.011
AK291693_1(AK291693|pid:none) Homo sapiens cDNA FLJ77708 complet...    45   0.011
(O75843) RecName: Full=AP-1 complex subunit gamma-like 2; AltNam...    45   0.015
AY810338_1(AY810338|pid:none) Schistosoma japonicum SJCHGC05448 ...    44   0.019
(Q9QZE5) RecName: Full=Coatomer subunit gamma; AltName: Full=Gam...    44   0.025
U91930_1(U91930|pid:none) Homo sapiens AP-3 complex delta subuni...    44   0.025
AK077461_1(AK077461|pid:none) Mus musculus 8 days embryo whole b...    44   0.025
(Q9PUE4) RecName: Full=Coatomer subunit gamma-2; AltName: Full=G...    44   0.025
(Q4AEF8) RecName: Full=Coatomer subunit gamma; AltName: Full=Gam...    44   0.025
AF191561_1(AF191561|pid:none) Danio rerio clone fc02e12 coatomer...    44   0.025
BC096860_1(BC096860|pid:none) Danio rerio coatomer protein compl...    44   0.033
AK007733_1(AK007733|pid:none) Mus musculus 10 day old male pancr...    43   0.043
T24169(T24169)hypothetical protein R11A5.1b - Caenorhabditis ele...    43   0.043
(P53620) RecName: Full=Coatomer subunit gamma; AltName: Full=Gam...    43   0.056
AC002423_12(AC002423|pid:none) Genomic sequence for Arabidopsis ...    42   0.096
T24166(T24166)hypothetical protein R11A5.1a - Caenorhabditis ele...    42   0.096
AJ224112_1(AJ224112|pid:none) Homo sapiens gamma-adaptin gene, e...    41   0.16
CR382125_578(CR382125|pid:none) Kluyveromyces lactis strain NRRL...    41   0.21
(Q32PG1) RecName: Full=AP-3 complex subunit beta-1; AltName: Ful...    41   0.21
(P36000) RecName: Full=AP-1 complex subunit beta-1; AltName: Ful...    41   0.21
BC053128_1(BC053128|pid:none) Danio rerio adaptor-related protei...    41   0.21
AY623424_1(AY623424|pid:none) Homo sapiens adaptor-related prote...    40   0.28
T50652(T50652) AP-3 complex beta3A chain [imported] - human  &U9...    40   0.28
(Q8H852) RecName: Full=Coatomer subunit gamma-1; AltName: Full=G...    40   0.28
AY113545_1(AY113545|pid:none) Drosophila melanogaster RE62270 fu...    40   0.36
AK163957_1(AK163957|pid:none) Mus musculus ES cells cDNA, RIKEN ...    40   0.36
BC015068_1(BC015068|pid:none) Mus musculus adaptor-related prote...    40   0.36
BT053959_1(BT053959|pid:none) Zea mays full-length cDNA clone ZM...    40   0.36
(Q9Z1T1) RecName: Full=AP-3 complex subunit beta-1; AltName: Ful...    40   0.36
CR380950_86(CR380950|pid:none) Candida glabrata strain CBS138 ch...    40   0.36
AK291201_1(AK291201|pid:none) Homo sapiens cDNA FLJ76822 complet...    40   0.48
AF255316_1(AF255316|pid:none) Drosophila yakuba AP-3 delta-adapt...    39   0.62
AF044287_1(AF044287|pid:none) Drosophila melanogaster delta adap...    39   0.62
(Q0WW26) RecName: Full=Coatomer subunit gamma; AltName: Full=Gam...    39   0.81
(Q80V94) RecName: Full=AP-4 complex subunit epsilon-1; AltName: ...    39   1.1
AL928590_2(AL928590|pid:none) Mouse DNA sequence from clone RP23...    39   1.1
AF191563_1(AF191563|pid:none) Drosophila melanogaster coatomer p...    39   1.1
CU928179_839(CU928179|pid:none) Zygosaccharomyces rouxii strain ...    39   1.1
AK039257_1(AK039257|pid:none) Mus musculus adult male spinal cor...    39   1.1
AF252686_1(AF252686|pid:none) Drosophila simulans strain sim8 AP...    38   1.4
CP000114_666(CP000114|pid:none) Streptococcus agalactiae A909, c...    38   1.4
AE010299_3513(AE010299|pid:none) Methanosarcina acetivorans str....    37   2.4
(A8EZT5) RecName: Full=DNA ligase;          EC=6.5.1.2; AltName:...    37   2.4
(Q9UPM8) RecName: Full=AP-4 complex subunit epsilon-1; AltName: ...    37   3.1
CP000745_284(CP000745|pid:none) Methanococcus maripaludis C7, co...    37   3.1
AK297290_1(AK297290|pid:none) Homo sapiens cDNA FLJ60689 complet...    37   3.1
AE017354_1195(AE017354|pid:none) Legionella pneumophila subsp. p...    37   3.1
DQ167748_1(DQ167748|pid:none) Drosophila simulans putative AP-3 ...    37   4.0
DQ167750_1(DQ167750|pid:none) Drosophila yakuba putative AP-3 de...    37   4.0
CR628337_1236(CR628337|pid:none) Legionella pneumophila str. Len...    37   4.0
AK294546_1(AK294546|pid:none) Homo sapiens cDNA FLJ52990 complet...    37   4.0
CR749604_1(CR749604|pid:none) Homo sapiens mRNA; cDNA DKFZp686L1...    37   4.0
DQ167747_1(DQ167747|pid:none) Drosophila orena putative AP-3 del...    37   4.0
AB030653_1(AB030653|pid:none) Homo sapiens mRNA for epsilon-adap...    37   4.0
AB210577_1(AB210577|pid:none) Ciona intestinalis Ci-NAB1/2 mRNA,...    36   5.3
CP000817_4305(CP000817|pid:none) Lysinibacillus sphaericus C3-41...    36   6.9
CR628336_1230(CR628336|pid:none) Legionella pneumophila str. Par...    36   6.9
AF252684_1(AF252684|pid:none) Drosophila simulans strain sim5 AP...    35   9.0

>(Q23924) RecName: Full=Coatomer subunit beta; AltName: Full=Beta-coat
            protein;          Short=Beta-COP;
            &AF247143_1(AF247143|pid:none)
          Length = 912

 Score =  578 bits (1491), Expect(2) = 0.0
 Identities = 295/295 (100%), Positives = 295/295 (100%)
 Frame = +2

Query: 455  SEMILVCNSLLNDLNHPNEFVRGSTLRFLCKLREAEVLEPLVPSVRSNLENRHAYCRRNA 634
            SEMILVCNSLLNDLNHPNEFVRGSTLRFLCKLREAEVLEPLVPSVRSNLENRHAYCRRNA
Sbjct: 100  SEMILVCNSLLNDLNHPNEFVRGSTLRFLCKLREAEVLEPLVPSVRSNLENRHAYCRRNA 159

Query: 635  VLAIYNIYSHFDYLIPDAPELIYNFLLQEKDASCKRNAFIMLFNCAPEKAVEYLSSVLDE 814
            VLAIYNIYSHFDYLIPDAPELIYNFLLQEKDASCKRNAFIMLFNCAPEKAVEYLSSVLDE
Sbjct: 160  VLAIYNIYSHFDYLIPDAPELIYNFLLQEKDASCKRNAFIMLFNCAPEKAVEYLSSVLDE 219

Query: 815  VPSFGDMLQFIVVELIRKVCKTSPSERSKYIKCIFTLLNSSSPAVKYESAGTLLSLSSAP 994
            VPSFGDMLQFIVVELIRKVCKTSPSERSKYIKCIFTLLNSSSPAVKYESAGTLLSLSSAP
Sbjct: 220  VPSFGDMLQFIVVELIRKVCKTSPSERSKYIKCIFTLLNSSSPAVKYESAGTLLSLSSAP 279

Query: 995  TAVRGAASAYIDLLCNESDNNVKMIVLDKLIEIKKNHSKIMEELVMDILRALSSPNIDIC 1174
            TAVRGAASAYIDLLCNESDNNVKMIVLDKLIEIKKNHSKIMEELVMDILRALSSPNIDIC
Sbjct: 280  TAVRGAASAYIDLLCNESDNNVKMIVLDKLIEIKKNHSKIMEELVMDILRALSSPNIDIC 339

Query: 1175 KKVLNIVLDSVTPKNIDEIILFLKKEINKTQSKEFDKGLEYRHILIRTIHVSSLK 1339
            KKVLNIVLDSVTPKNIDEIILFLKKEINKTQSKEFDKGLEYRHILIRTIHVSSLK
Sbjct: 340  KKVLNIVLDSVTPKNIDEIILFLKKEINKTQSKEFDKGLEYRHILIRTIHVSSLK 394

 Score =  189 bits (481), Expect(2) = 0.0
 Identities = 92/92 (100%), Positives = 92/92 (100%)
 Frame = +1

Query: 157 MSALTQSGSIEKPCTILINYDKGDPPQVNEFKQNFEHGTTEQKIETLKKVILYTINGEPI 336
           MSALTQSGSIEKPCTILINYDKGDPPQVNEFKQNFEHGTTEQKIETLKKVILYTINGEPI
Sbjct: 1   MSALTQSGSIEKPCTILINYDKGDPPQVNEFKQNFEHGTTEQKIETLKKVILYTINGEPI 60

Query: 337 PQLLMPIILYVMPSNDHTIKKLLLIYWEVIEK 432
           PQLLMPIILYVMPSNDHTIKKLLLIYWEVIEK
Sbjct: 61  PQLLMPIILYVMPSNDHTIKKLLLIYWEVIEK 92

 Score =  520 bits (1339), Expect = e-146
 Identities = 261/261 (100%), Positives = 261/261 (100%)
 Frame = +3

Query: 1350 SKKAFGPVDTEDDLIKAVGNTGEANKDQNEYSKISQLSGFSDPIYVEAYVRVHQYDIVLD 1529
            SKKAFGPVDTEDDLIKAVGNTGEANKDQNEYSKISQLSGFSDPIYVEAYVRVHQYDIVLD
Sbjct: 643  SKKAFGPVDTEDDLIKAVGNTGEANKDQNEYSKISQLSGFSDPIYVEAYVRVHQYDIVLD 702

Query: 1530 ISVFNQTNDTLQNVTLELVTLGDLKICERVPPFTMAPREKTSAKASIKVSSTDNGVIMGT 1709
            ISVFNQTNDTLQNVTLELVTLGDLKICERVPPFTMAPREKTSAKASIKVSSTDNGVIMGT
Sbjct: 703  ISVFNQTNDTLQNVTLELVTLGDLKICERVPPFTMAPREKTSAKASIKVSSTDNGVIMGT 762

Query: 1710 IAFDIAGSVSSMSDKNCVILNELHIDVIDYILPANHQYTDVLFRNHWLEFEWENKIPVNT 1889
            IAFDIAGSVSSMSDKNCVILNELHIDVIDYILPANHQYTDVLFRNHWLEFEWENKIPVNT
Sbjct: 763  IAFDIAGSVSSMSDKNCVILNELHIDVIDYILPANHQYTDVLFRNHWLEFEWENKIPVNT 822

Query: 1890 NITDLVKYVHHISKVTNMGILTPEVHLSNDTGILSANLCAKSVFGEDALANICIEKQADG 2069
            NITDLVKYVHHISKVTNMGILTPEVHLSNDTGILSANLCAKSVFGEDALANICIEKQADG
Sbjct: 823  NITDLVKYVHHISKVTNMGILTPEVHLSNDTGILSANLCAKSVFGEDALANICIEKQADG 882

Query: 2070 KISGYIRIRAKVQSIAVTLGE 2132
            KISGYIRIRAKVQSIAVTLGE
Sbjct: 883  KISGYIRIRAKVQSIAVTLGE 903

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 3,070,489,613
Number of extensions: 58276212
Number of successful extensions: 197376
Number of sequences better than 10.0: 209
Number of HSP's gapped: 197077
Number of HSP's successfully gapped: 307
Length of query: 751
Length of database: 1,040,966,779
Length adjustment: 136
Effective length of query: 615
Effective length of database: 605,184,019
Effective search space: 372188171685
Effective search space used: 372188171685
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.77  gvh: 0.49  alm: 0.38  top: 0.53  tms: 0.00  mit: 0.21  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 56.0 %: cytoplasmic
	 36.0 %: nuclear
	  8.0 %: peroxisomal

>> prediction for Contig-U11082-1 is cyt