Contig-U11059-1
Contig ID Contig-U11059-1
Contig update 2002.12.18
Contig sequence
>Contig-U11059-1 (Contig-U11059-1Q) /CSM_Contig/Contig-U11059-1Q.Seq.d
AAAAAAAAAAAGGNAATTGTTTTATTTTAAAACATGAATAACAAACAAGA
AGAAATAGACCAATTTCTTTCTTCAACGTCGACATCACCATCACCATCAT
CTTCTTCATCGCCATCGAATAACGATTCAACATCATTAAAATCTATGATA
TCGGGAATAGAGAATTTAAATGTTCATTCCAAAGGAAATGACAACAAAAA
TAACAACAACAATAACAACAACAACAACAGTAATAACAACGAAAAACAAA
AAGATATTGTATCATTAGAAAATAATAGTAGCAGTAATAACACTACAACA
ACAACTACAACAACTACCACCAGTAATCATAATAGTAATAATAATAGTAA
CAACAATAATAATAATATTAATAATAATAATATTAATAATAATAATTATG
AACCATTAGTCAATGGTCATAATAATGGATTTGGAGACAAATTGAACGAC
CAACCATCTCCATCTTCTCATAGAGTATCGGATTTTTCTGATGAGTATAG
TCCATCAAAAGTTAGGATTTTAGTTGCAGATGATGACGATGTTCAAAGAA
AGATTTTAAATAATTTACTTAAAAAATTTCATTATAATGTTACATTAGTA
CCAAATGGAGAAATAGCATGGGAATATATAAATAAAGGTCAACAAAAATA
TGATTTAGTATTAACAGATGTAATGATGCCACATATTACAGGCTTTGATT
TATTACAAAGAATTAATGATCATCCAGTTCACAGACATATACCAGTTATT
TTAATGTCAGGAACAGCAGTAGATTATAAATATGCAAATGATACAATTAA
AATTGGTGGACAAGATTTTTTAACAAAACCAATTGCAAAGGAATTATTAA
AGAAAAAGATTGATACAGTTTTACAAAGTATTTGGCAAAGAAGAAAAGAG
GAAGAATATAAAGCAACGTTGGCACAAGAAAGAGAGAAAGGTAATAAATT
AGCAAAGGAGATGGAATTGAAAGAACATGAGATTGGAGAGTTAACCAAAA
AAGTATCGAAAATGTCTTCAATCTCAAAGGAAGCAATGGAATCACCATTG
GTATCAGTCACAAGAAACATTGAGGAGCTATTGAAGCAAAGTAGTTGGTC
TCATTATGAATCAGAGATCAAGGAGAAACTAAGCTCAATTTTAAAGGAGT
TGGGTTCTTCAAATATTTACAGACCAAGTTTTGAAAAGTTGATAAAGAAT
GATTCAGTTGACCCAGTTACAAAGAGTTTCTTGGTTTCAGAGTTTTCGTC
AACTACAAGTCGTAGAAATTCAATACCAACTTTCCCTCAAACTACATATA
ATCGTGATACCAAAGAAGTGATCAAAGGTTGGGAGTTTGATGTTTTCAAA
TACTCTGAAGATGATTTAATGCCATTATTGGTGGATATGTTTGAAAA---
-------GTTAATGCTCAAACTGAATTATCATTAGAATATAATGATATTT
CTGTATTAGAGAATCATCATGCTATGTTAACATTTAAAATTTTAAGAAAT
AGTGAGTGTAATATATTAGAAGGTTTAAATGAAGATCAATACAAAGAATT
AAGAAGATCAGTAGTTCAATTGATTTTAGCAACTGATATGCAAAATCATT
TTGAACATACTAATAAATTTCAACATCATTTAAATAATTTACCATTTGAT
AGAAATAAAAAAGAAGATAGACAAATGATTTTAAATTTCTTAATAAAGTG
CGGTGATATTTCAAATATTGCAAGACCATGGCATTTAAATTTTGAATGGT
CTTTAAGAGTTTCAGATGAATTTTTCCAACAATCACATTATGAAACTATT
TGTGGTTATCCAGTTACACCATTTATGGATAAAACCAAAACCACAAGAGC
AAGAATCGCAGCGGATTTCATAGATTTCGTTGCATCACCTCTTTTCCAAA
GTATGGCAAAGTTCTTAAAAGAAAGTCAATTCCTATTAAAGGTAATTAGT
AAAAATCGTGAAAATTGGCAAGCATACATGGAATTACAAAAAGAAGGTAA
ATGTAATGATGATGATCTCCAATTTATGGAAGATCCAACAATTTTGGTTA
AATCAAAATTACCAAAAATTGATGAAGAAGAAAATAGAGATAAAGTTTCT
TCATCATCATCTTCTTCGACCGCTCCTTTAACTTCAACTTCTTCTTCAAA
TAATGAAACTTCATCATCATAAAAAAATTAACAAAAAAAAAAACAAAACT
AAACACTAAACACTAAACAGTGAACAAATCAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAATGCTATTT

Gap gap included
Contig length 2259
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 1963256
End point 1960996
Strand (PLUS/MINUS) MINUS
Number of clones 14
Number of EST 19
Link to clone list U11059
List of clone(s)

est1=SHJ705F,1,571
est2=CHO868F,19,612
est3=CHE574F,24,633
est4=CHN464F,34,627
est5=VHH728F,228,877
est6=AHN608F,312,901
est7=AFO157F,752,1398
est8=AFO157Z,1399,2155
est9=VHH728Z,1403,2118
est10=SHF214Z,1414,1783
est11=CHO868Z,1416,2169
est12=VHC772Z,1417,2059
est13=CHE574Z,1487,2167
est14=SSC864Z,1544,2173
est15=CHN464Z,1557,2212
est16=CHG467Z,1563,1960
est17=CHH750Z,1582,1781
est18=CHJ113Z,1584,1771
est19=SSK150F,2011,2261
Translated Amino Acid sequence
kkkkxivlf*NMNNKQEEIDQFLSSTSTSPSPSSSSSPSNNDSTSLKSMISGIENLNVHS
KGNDNKNNNNNNNNNNSNNNEKQKDIVSLENNSSSNNTTTTTTTTTTSNHNSNNNSNNNN
NNINNNNINNNNYEPLVNGHNNGFGDKLNDQPSPSSHRVSDFSDEYSPSKVRILVADDDD
VQRKILNNLLKKFHYNVTLVPNGEIAWEYINKGQQKYDLVLTDVMMPHITGFDLLQRIND
HPVHRHIPVILMSGTAVDYKYANDTIKIGGQDFLTKPIAKELLKKKIDTVLQSIWQRRKE
EEYKATLAQEREKGNKLAKEMELKEHEIGELTKKVSKMSSISKEAMESPLVSVTRNIEEL
LKQSSWSHYESEIKEKLSSILKELGSSNIYRPSFEKLIKNDSVDPVTKSFLVSEFSSTTS
RRNSIPTFPQTTYNRDTKEVIKGWEFDVFKYSEDDLMPLLVDMFE---

---VNAQTELSLEYNDISVLENHHAMLTFKILRNSECNILEGLNEDQYKELRRSVVQLIL
ATDMQNHFEHTNKFQHHLNNLPFDRNKKEDRQMILNFLIKCGDISNIARPWHLNFEWSLR
VSDEFFQQSHYETICGYPVTPFMDKTKTTRARIAADFIDFVASPLFQSMAKFLKESQFLL
KVISKNRENWQAYMELQKEGKCNDDDLQFMEDPTILVKSKLPKIDEEENRDKVSSSSSSS
TAPLTSTSSSNNETSSS*kn*qkkkqn*tlntkq*tnqkkkkkkkkknai


Translated Amino Acid sequence (All Frames)
Frame A:
kkkkxivlf*NMNNKQEEIDQFLSSTSTSPSPSSSSSPSNNDSTSLKSMISGIENLNVHS
KGNDNKNNNNNNNNNNSNNNEKQKDIVSLENNSSSNNTTTTTTTTTTSNHNSNNNSNNNN
NNINNNNINNNNYEPLVNGHNNGFGDKLNDQPSPSSHRVSDFSDEYSPSKVRILVADDDD
VQRKILNNLLKKFHYNVTLVPNGEIAWEYINKGQQKYDLVLTDVMMPHITGFDLLQRIND
HPVHRHIPVILMSGTAVDYKYANDTIKIGGQDFLTKPIAKELLKKKIDTVLQSIWQRRKE
EEYKATLAQEREKGNKLAKEMELKEHEIGELTKKVSKMSSISKEAMESPLVSVTRNIEEL
LKQSSWSHYESEIKEKLSSILKELGSSNIYRPSFEKLIKNDSVDPVTKSFLVSEFSSTTS
RRNSIPTFPQTTYNRDTKEVIKGWEFDVFKYSEDDLMPLLVDMFE---

---VNAQTELSLEYNDISVLENHHAMLTFKILRNSECNILEGLNEDQYKELRRSVVQLIL
ATDMQNHFEHTNKFQHHLNNLPFDRNKKEDRQMILNFLIKCGDISNIARPWHLNFEWSLR
VSDEFFQQSHYETICGYPVTPFMDKTKTTRARIAADFIDFVASPLFQSMAKFLKESQFLL
KVISKNRENWQAYMELQKEGKCNDDDLQFMEDPTILVKSKLPKIDEEENRDKVSSSSSSS
TAPLTSTSSSNNETSSS*kn*qkkkqn*tlntkq*tnqkkkkkkkkknai

Frame B:
kkkrxlfyfkt*itnkkk*tnfflqrrhhhhhhllhrhritiqhh*nl*yre*ri*mfip
kemttkitttitttttvittknkkilyh*kiivavitlqqqlqqlppviiiviiivttii
iiliiiiliiiimnh*smviimdletn*ttnhlhllieyriflmsivhqklgf*lqmmtm
fkerf*iiylknfiimlh*yqmek*hgni*ikvnknmi*y*qm**chilqaliyykelmi
iqftdiyqlf*cqeqq*iinmqmiqlklvdkif*qnqlqrny*rkrliqfykvfgkeekr
knikqrwhkkerkvin*qrrwn*knmrles*pkkyrkclqsqrkqwnhhwyqsqetlrsy
*skvvglimnqrsrrn*aqf*rswvlqiftdqvlks**rmiqltqlqrvswfqsfrqlqv
veiqyqlslklhiivipkk*skvgslmfsntlkmi*chywwiclk---

---lmlklnyh*nimifly*riimlc*hlkf*eivsviy*kv*mkintkn*edq*fn*f*
qlickiilnilinfnii*iiyhlieikkkidk*f*is**savifqilqdhgi*ilngl*e
fqmnfsnnhimklfvviqlhhlwikpkpqeqesqris*islhhlfskvwqss*kkvnsy*
r*lvkivkigkhtwnykkkvnvmmmisnlwkiqqfwlnqnyqklmkkkieikflhhhllr
pll*lqlllqimklhhhkkinkkknktkh*tlnseqikkkkkkkkkkmlf

Frame C:
kkkgncfilkhe*qtrrnrpisffnvdititiiffiaie*rfniikiydignrefkcsfq
rk*qqk*qqq*qqqqq**qrktkryciirk***q**hynnnynnyhq*s*******qq**
*y****y****l*tisqws**wiwrqierptisifs*sigff**v*siks*dfscr**rc
skkdfk*ft*kisl*cyistkwrnsmgiyk*rstki*fsinrcndatyyrl*fitkn**s
sssqtytsyfnvrnssrl*ick*yn*nwwtrffnktnckgiikekd*ysftkylakkkrg
ri*snvgtrkrer**iskgdgiert*dwrvnqksienvfnlkgsngitigishkkh*gai
eak*lvsl*irdqgetklnfkgvgffkylqtkf*kvdke*fs*psykeflgfrvfvnyks
*kfntnfpsnyi*s*yqrsdqrlgv*cfqil*r*fnaiiggyv*k---

---*csn*iiiri**yfciresscyvni*nfkk**v*yirrfk*rsiqrikkisssidfs
n*yaksf*ty**istsfk*fti**k*krr*tndfkflnkvr*yfkycktmafkf*mvfks
fr*ifptitl*nylwlssytiyg*nqnhksknrsgfhrfrcitsfpkygkvlkrksipik
gn**ks*klasihgitkrr*m****spiygrsnnfg*ikitkn**rrk*r*sffiiiffd
rsfnfnfffk**nfiiikkltkkktklntkh*tvnkskkkkkkkkkkcy

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U11059-1 (Contig-U11059-1Q)
/CSM_Contig/Contig-U11059-1Q.Seq.d
(2269 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U11059-1 (Contig-U11059-1Q) /CSM_Contig/Conti... 3457 0.0
Contig-U13346-1 (Contig-U13346-1Q) /CSM_Contig/Conti... 48 4e-05
Contig-U04418-1 (Contig-U04418-1Q) /CSM_Contig/Conti... 48 4e-05
Contig-U14479-1 (Contig-U14479-1Q) /CSM_Contig/Conti... 46 2e-04
Contig-U14133-1 (Contig-U14133-1Q) /CSM_Contig/Conti... 46 2e-04
Contig-U12305-1 (Contig-U12305-1Q) /CSM_Contig/Conti... 46 2e-04
Contig-U12197-1 (Contig-U12197-1Q) /CSM_Contig/Conti... 46 2e-04
Contig-U14508-1 (Contig-U14508-1Q) /CSM_Contig/Conti... 44 7e-04
Contig-U13824-1 (Contig-U13824-1Q) /CSM_Contig/Conti... 44 7e-04
Contig-U11587-1 (Contig-U11587-1Q) /CSM_Contig/Conti... 44 7e-04

>Contig-U11059-1 (Contig-U11059-1Q) /CSM_Contig/Contig-U11059-1Q.Seq.d
Length = 2269

Score = 3457 bits (1744), Expect = 0.0
Identities = 1774/1774 (100%)
Strand = Plus / Plus


Query: 397 tatgaaccattagtcaatggtcataataatggatttggagacaaattgaacgaccaacca 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tatgaaccattagtcaatggtcataataatggatttggagacaaattgaacgaccaacca 456


Query: 457 tctccatcttctcatagagtatcggatttttctgatgagtatagtccatcaaaagttagg 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tctccatcttctcatagagtatcggatttttctgatgagtatagtccatcaaaagttagg 516


Query: 517 attttagttgcagatgatgacgatgttcaaagaaagattttaaataatttacttaaaaaa 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 attttagttgcagatgatgacgatgttcaaagaaagattttaaataatttacttaaaaaa 576


Query: 577 tttcattataatgttacattagtaccaaatggagaaatagcatgggaatatataaataaa 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tttcattataatgttacattagtaccaaatggagaaatagcatgggaatatataaataaa 636


Query: 637 ggtcaacaaaaatatgatttagtattaacagatgtaatgatgccacatattacaggcttt 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 ggtcaacaaaaatatgatttagtattaacagatgtaatgatgccacatattacaggcttt 696


Query: 697 gatttattacaaagaattaatgatcatccagttcacagacatataccagttattttaatg 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 gatttattacaaagaattaatgatcatccagttcacagacatataccagttattttaatg 756


Query: 757 tcaggaacagcagtagattataaatatgcaaatgatacaattaaaattggtggacaagat 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 tcaggaacagcagtagattataaatatgcaaatgatacaattaaaattggtggacaagat 816


Query: 817 tttttaacaaaaccaattgcaaaggaattattaaagaaaaagattgatacagttttacaa 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 tttttaacaaaaccaattgcaaaggaattattaaagaaaaagattgatacagttttacaa 876


Query: 877 agtatttggcaaagaagaaaagaggaagaatataaagcaacgttggcacaagaaagagag 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 agtatttggcaaagaagaaaagaggaagaatataaagcaacgttggcacaagaaagagag 936


Query: 937 aaaggtaataaattagcaaaggagatggaattgaaagaacatgagattggagagttaacc 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937 aaaggtaataaattagcaaaggagatggaattgaaagaacatgagattggagagttaacc 996


Query: 997 aaaaaagtatcgaaaatgtcttcaatctcaaaggaagcaatggaatcaccattggtatca 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 997 aaaaaagtatcgaaaatgtcttcaatctcaaaggaagcaatggaatcaccattggtatca 1056


Query: 1057 gtcacaagaaacattgaggagctattgaagcaaagtagttggtctcattatgaatcagag 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1057 gtcacaagaaacattgaggagctattgaagcaaagtagttggtctcattatgaatcagag 1116


Query: 1117 atcaaggagaaactaagctcaattttaaaggagttgggttcttcaaatatttacagacca 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1117 atcaaggagaaactaagctcaattttaaaggagttgggttcttcaaatatttacagacca 1176


Query: 1177 agttttgaaaagttgataaagaatgattcagttgacccagttacaaagagtttcttggtt 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1177 agttttgaaaagttgataaagaatgattcagttgacccagttacaaagagtttcttggtt 1236


Query: 1237 tcagagttttcgtcaactacaagtcgtagaaattcaataccaactttccctcaaactaca 1296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1237 tcagagttttcgtcaactacaagtcgtagaaattcaataccaactttccctcaaactaca 1296


Query: 1297 tataatcgtgataccaaagaagtgatcaaaggttgggagtttgatgttttcaaatactct 1356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1297 tataatcgtgataccaaagaagtgatcaaaggttgggagtttgatgttttcaaatactct 1356


Query: 1357 gaagatgatttaatgccattattggtggatatgtttgaaaannnnnnnnnngttaatgct 1416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1357 gaagatgatttaatgccattattggtggatatgtttgaaaannnnnnnnnngttaatgct 1416


Query: 1417 caaactgaattatcattagaatataatgatatttctgtattagagaatcatcatgctatg 1476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1417 caaactgaattatcattagaatataatgatatttctgtattagagaatcatcatgctatg 1476


Query: 1477 ttaacatttaaaattttaagaaatagtgagtgtaatatattagaaggtttaaatgaagat 1536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1477 ttaacatttaaaattttaagaaatagtgagtgtaatatattagaaggtttaaatgaagat 1536


Query: 1537 caatacaaagaattaagaagatcagtagttcaattgattttagcaactgatatgcaaaat 1596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1537 caatacaaagaattaagaagatcagtagttcaattgattttagcaactgatatgcaaaat 1596


Query: 1597 cattttgaacatactaataaatttcaacatcatttaaataatttaccatttgatagaaat 1656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1597 cattttgaacatactaataaatttcaacatcatttaaataatttaccatttgatagaaat 1656


Query: 1657 aaaaaagaagatagacaaatgattttaaatttcttaataaagtgcggtgatatttcaaat 1716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1657 aaaaaagaagatagacaaatgattttaaatttcttaataaagtgcggtgatatttcaaat 1716


Query: 1717 attgcaagaccatggcatttaaattttgaatggtctttaagagtttcagatgaatttttc 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1717 attgcaagaccatggcatttaaattttgaatggtctttaagagtttcagatgaatttttc 1776


Query: 1777 caacaatcacattatgaaactatttgtggttatccagttacaccatttatggataaaacc 1836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1777 caacaatcacattatgaaactatttgtggttatccagttacaccatttatggataaaacc 1836


Query: 1837 aaaaccacaagagcaagaatcgcagcggatttcatagatttcgttgcatcacctcttttc 1896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1837 aaaaccacaagagcaagaatcgcagcggatttcatagatttcgttgcatcacctcttttc 1896


Query: 1897 caaagtatggcaaagttcttaaaagaaagtcaattcctattaaaggtaattagtaaaaat 1956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1897 caaagtatggcaaagttcttaaaagaaagtcaattcctattaaaggtaattagtaaaaat 1956


Query: 1957 cgtgaaaattggcaagcatacatggaattacaaaaagaaggtaaatgtaatgatgatgat 2016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1957 cgtgaaaattggcaagcatacatggaattacaaaaagaaggtaaatgtaatgatgatgat 2016


Query: 2017 ctccaatttatggaagatccaacaattttggttaaatcaaaattaccaaaaattgatgaa 2076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2017 ctccaatttatggaagatccaacaattttggttaaatcaaaattaccaaaaattgatgaa 2076


Query: 2077 gaagaaaatagagataaagtttcttcatcatcatcttcttcgaccgctcctttaacttca 2136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2077 gaagaaaatagagataaagtttcttcatcatcatcttcttcgaccgctcctttaacttca 2136


Query: 2137 acttcttcttcaaataatgaaacttcatcatcat 2170
||||||||||||||||||||||||||||||||||
Sbjct: 2137 acttcttcttcaaataatgaaacttcatcatcat 2170


Score = 349 bits (176), Expect = 8e-96
Identities = 176/176 (100%)
Strand = Plus / Plus


Query: 15 aattgttttattttaaaacatgaataacaaacaagaagaaatagaccaatttctttcttc 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 aattgttttattttaaaacatgaataacaaacaagaagaaatagaccaatttctttcttc 74


Query: 75 aacgtcgacatcaccatcaccatcatcttcttcatcgccatcgaataacgattcaacatc 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 aacgtcgacatcaccatcaccatcatcttcttcatcgccatcgaataacgattcaacatc 134


Query: 135 attaaaatctatgatatcgggaatagagaatttaaatgttcattccaaaggaaatg 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 attaaaatctatgatatcgggaatagagaatttaaatgttcattccaaaggaaatg 190


Score = 137 bits (69), Expect = 6e-32
Identities = 69/69 (100%)
Strand = Plus / Plus


Query: 253 gatattgtatcattagaaaataatagtagcagtaataacactacaacaacaactacaaca 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gatattgtatcattagaaaataatagtagcagtaataacactacaacaacaactacaaca 312


Query: 313 actaccacc 321
|||||||||
Sbjct: 313 actaccacc 321


Score = 63.9 bits (32), Expect = 7e-10
Identities = 32/32 (100%)
Strand = Plus / Plus


Query: 2199 ctaaacactaaacactaaacagtgaacaaatc 2230
||||||||||||||||||||||||||||||||
Sbjct: 2199 ctaaacactaaacactaaacagtgaacaaatc 2230


Score = 30.2 bits (15), Expect = 10.0
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 2205 actaaacactaaaca 2219
|||||||||||||||
Sbjct: 2198 actaaacactaaaca 2212


>Contig-U13346-1 (Contig-U13346-1Q) /CSM_Contig/Contig-U13346-1Q.Seq.d
Length = 1364

Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus


Query: 291 cactacaacaacaactacaacaac 314
||||||||||||||||||||||||
Sbjct: 593 cactacaacaacaactacaacaac 616


Score = 32.2 bits (16), Expect = 2.5
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 295 acaacaacaactacaacaac 314
||||||||||| ||||||||
Sbjct: 1015 acaacaacaacaacaacaac 1034


Score = 32.2 bits (16), Expect = 2.5
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 295 acaacaacaactacaacaac 314
||||||||||| ||||||||
Sbjct: 1018 acaacaacaacaacaacaac 1037


Score = 32.2 bits (16), Expect = 2.5
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 295 acaacaacaactacaacaac 314
||||||||||| ||||||||
Sbjct: 1009 acaacaacaacaacaacaac 1028


Score = 32.2 bits (16), Expect = 2.5
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 295 acaacaacaactacaacaac 314
||||||||||| ||||||||
Sbjct: 1012 acaacaacaacaacaacaac 1031


Score = 30.2 bits (15), Expect = 10.0
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 301 acaactacaacaactacca 319
|||||||||||||| ||||
Sbjct: 1142 acaactacaacaacaacca 1160


>Contig-U04418-1 (Contig-U04418-1Q) /CSM_Contig/Contig-U04418-1Q.Seq.d
Length = 1187

Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus


Query: 1570 ttgattttagcaactgatatgcaaaatcattt 1601
||||||||||||||||||||| | ||||||||
Sbjct: 548 ttgattttagcaactgatatggagaatcattt 579


Score = 30.2 bits (15), Expect = 10.0
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 1456 ttagagaatcatcat 1470
|||||||||||||||
Sbjct: 431 ttagagaatcatcat 445


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 45,198
Number of Sequences: 6905
Number of extensions: 45198
Number of successful extensions: 8063
Number of sequences better than 10.0: 1151
length of query: 2269
length of database: 5,674,871
effective HSP length: 16
effective length of query: 2253
effective length of database: 5,564,391
effective search space: 12536572923
effective search space used: 12536572923
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.22
Homology vs DNA
Query= Contig-U11059-1 (Contig-U11059-1Q) /CSM_Contig/Contig-U11059-1Q.Seq.d
(2269 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ378382) Dictyostelium discoideum cDNA clone:ddc31c19, 3' ... 1304 0.0 2
(BJ441316) Dictyostelium discoideum cDNA clone:ddv46h07, 3' ... 1300 0.0 2
(BJ328783) Dictyostelium discoideum cDNA clone:dda29a15, 5' ... 1281 0.0 1
(BJ385037) Dictyostelium discoideum cDNA clone:ddc51h18, 3' ... 1277 0.0 3
(U60170) Dictyostelium discoideum RegA (regA) gene, complete... 1273 0.0 1
(AJ005398) Dictyostelium discoideum regA gene. 1273 0.0 1
(BJ438215) Dictyostelium discoideum cDNA clone:ddv36p17, 3' ... 1265 0.0 1
(C93964) Dictyostelium discoideum slug cDNA, clone SSC864. 1189 0.0 2
(BJ345911) Dictyostelium discoideum cDNA clone:dda29a15, 3' ... 1055 0.0 2
(BJ422560) Dictyostelium discoideum cDNA clone:ddv46h07, 5' ... 946 0.0 2
(BJ337644) Dictyostelium discoideum cDNA clone:dda58o02, 5' ... 1001 0.0 1
(BJ384234) Dictyostelium discoideum cDNA clone:ddc48p16, 3' ... 997 0.0 1
(BJ364449) Dictyostelium discoideum cDNA clone:ddc31c19, 5' ... 470 0.0 3
(BJ368956) Dictyostelium discoideum cDNA clone:ddc48p16, 5' ... 458 0.0 3
(BJ369741) Dictyostelium discoideum cDNA clone:ddc51h18, 5' ... 428 0.0 3
(BJ396562) Dictyostelium discoideum cDNA clone:dds43j01, 5' ... 349 0.0 3
(BJ406097) Dictyostelium discoideum cDNA clone:dds34k04, 3' ... 728 0.0 1
(BJ379348) Dictyostelium discoideum cDNA clone:ddc34f18, 3' ... 682 0.0 1
(BJ380247) Dictyostelium discoideum cDNA clone:ddc37d13, 3' ... 391 e-104 1
(BJ381028) Dictyostelium discoideum cDNA clone:ddc40i03, 3' ... 367 1e-96 1
(AU074252) Dictyostelium discoideum slug cDNA, clone SSK150. 299 2e-76 1
(AY162269) Dictyostelium discoideum cGMP-specific phosphodie... 48 8e-09 5
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 46 1e-07 12
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 40 2e-05 15
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595... 46 4e-05 10
(C84066) Dictyostelium discoideum slug cDNA, clone SSC594. 48 5e-05 3
(CP000102) Methanosphaera stadtmanae DSM 3091, complete genome. 42 5e-05 22
(AC116551) Dictyostelium discoideum chromosome 2 map complem... 38 3e-04 13
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 40 3e-04 16
(EK548018) 1095516103118 Global-Ocean-Sampling_GS-32-01-01-1... 44 4e-04 3
(EK007323) 1092955116682 Global-Ocean-Sampling_GS-31-01-01-1... 40 5e-04 3
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 34 8e-04 14
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 38 0.001 22
(EY313000) CAWX24713.rev CAWX Helobdella robusta Primary Ear... 42 0.001 3
(EY358069) CAWZ5590.rev CAWZ Helobdella robusta Primary Late... 42 0.001 3
(EK046128) 1092959551722 Global-Ocean-Sampling_GS-31-01-01-1... 40 0.001 2
(EY358070) CAWZ5590.fwd CAWZ Helobdella robusta Primary Late... 42 0.001 3
(EY303297) CAWX16633.fwd CAWX Helobdella robusta Primary Ear... 42 0.001 3
(AC118385) Rattus norvegicus clone CH230-42B13, WORKING DRAF... 48 0.002 9
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 38 0.002 11
(AL034558) Plasmodium falciparum MAL3P2. 42 0.002 10
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 44 0.003 17
(EY337300) CAWY8237.rev CAWY Helobdella robusta Subtracted E... 42 0.003 2
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 38 0.003 22
(EY356833) CAWZ4572.rev CAWZ Helobdella robusta Primary Late... 42 0.004 2
(EV845662) FTSCC92TF Tetrahymena thermophila SB210 cDNA libr... 40 0.004 3
(EY314989) CAWX25809.rev CAWX Helobdella robusta Primary Ear... 42 0.004 2
(EY302852) CAWX16383.rev CAWX Helobdella robusta Primary Ear... 42 0.004 2
(EY356834) CAWZ4572.fwd CAWZ Helobdella robusta Primary Late... 42 0.004 2
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 40 0.004 13
(EY337301) CAWY8237.fwd CAWY Helobdella robusta Subtracted E... 42 0.004 2
(EY314990) CAWX25809.fwd CAWX Helobdella robusta Primary Ear... 42 0.004 2
(AL844509) Plasmodium falciparum chromosome 13. 42 0.004 19
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 40 0.004 10
(EY302853) CAWX16383.fwd CAWX Helobdella robusta Primary Ear... 42 0.004 2
(AE014841) Plasmodium falciparum 3D7 chromosome 11 section 6... 36 0.004 16
(BX248504) Zebrafish DNA sequence from clone CH211-72K22 in ... 56 0.006 1
(CS225095) Sequence 1410 from Patent WO2005111217. 56 0.006 1
(FI061367) CHO_OF6649xn13f1.ab1 CHO_OF6 Nicotiana tabacum ge... 56 0.006 1
(FH503826) CHO_OF4828xm02f1.ab1 CHO_OF4 Nicotiana tabacum ge... 56 0.006 1
(ET793115) CHO_OF656xc21r1.ab1 CHO_OF Nicotiana tabacum geno... 56 0.006 1
(ET793064) CHO_OF656xc21f1.ab1 CHO_OF Nicotiana tabacum geno... 56 0.006 1
(EH624063) CHO_SL019xd24f1.ab1 CHO_SL Nicotiana tabacum cDNA... 56 0.006 1
(EH622517) CHO_SL024xo11f1.ab1 CHO_SL Nicotiana tabacum cDNA... 56 0.006 1
(EG649941) D145-AG10 Ethylene Induced Tobacco Leaf cDNA Libr... 56 0.006 1
(EB695495) NecGex_068B09 Ornamental tobacco (LxS8) Stage 12 ... 56 0.006 1
(EB695484) NecGex_068A09 Ornamental tobacco (LxS8) Stage 12 ... 56 0.006 1
(EB695314) NecGex_065H02 Ornamental tobacco (LxS8) Stage 12 ... 56 0.006 1
(EB683852) KR3B.113L01F.060119T7 KR3B Nicotiana tabacum cDNA... 56 0.006 1
(EB678088) KG9B.103I22F.051128T7 KG9B Nicotiana tabacum cDNA... 56 0.006 1
(EB677995) KG9B.103E22F.051128T7 KG9B Nicotiana tabacum cDNA... 56 0.006 1
(EB445418) KR2B.108C07F.051229T7 KR2B Nicotiana tabacum cDNA... 56 0.006 1
(EB441264) KN6B.108L09F.060106T7 KN6B Nicotiana tabacum cDNA... 56 0.006 1
(EB434262) TL13.106J04F.060315T7 TL13 Nicotiana tabacum cDNA... 56 0.006 1
(DW001891) KR3B.101G15F.051107T7 KR3B Nicotiana tabacum cDNA... 56 0.006 1
(DV162249) KP1B.110I22F.050727T7 KP1B Nicotiana tabacum cDNA... 56 0.006 1
(AM807337) Nicotiana tabacum EST, clone nt002064030. 56 0.006 1
(AM794093) Nicotiana tabacum EST, clone nt006207038. 56 0.006 1
(AM782108) Nicotiana tabacum EST, clone nt002010047. 56 0.006 1
(CV017586) tbt_010537 Normalized Nicotiana tabacum cDNA libr... 56 0.006 1
(BP752646) Nicotiana sylvestris mRNA, expressed in root, clo... 56 0.006 1
(FG640827) TT-08_C04 K326 trichome library Nicotiana tabacum... 56 0.006 1
(FG635072) TT-30_L03 tobacco leaf library Nicotiana tabacum ... 56 0.006 1
(FG192694) AGN_PNL219br1_f7.trimmed.seq AGN_PNL Nicotiana ta... 56 0.006 1
(FG192321) AGN_PNL218dr1_f11.trimmed.seq AGN_PNL Nicotiana t... 56 0.006 1
(FG154345) AGN_RNC104xj14r1.ab1 AGN_RNC Nicotiana tabacum cD... 56 0.006 1
(AF362374) Dictyostelium discoideum histidine kinase DhkM (d... 38 0.007 3
(AE014825) Plasmodium falciparum 3D7 chromosome 14 section 1... 36 0.009 14
(CR361558) Zebrafish DNA sequence from clone DKEY-22K11 in l... 38 0.010 10
(AU086474) Plasmodium falciparum 3D7 cDNA clone from Sugano ... 42 0.011 3
(AE017194) Bacillus cereus ATCC 10987, complete genome. 38 0.012 25
(AC116922) Dictyostelium discoideum chromosome 2 map 6061442... 32 0.013 11
(AC171131) Helobdella robusta clone CH306-1A2, complete sequ... 38 0.014 11
(G37798) GARP Plasmodium falciparum haploid Plasmodium falci... 42 0.017 3
(AL929353) Plasmodium falciparum strain 3D7, chromosome 5, s... 40 0.017 18
(AZ551618) ENTDV54TR Entamoeba histolytica Sheared DNA Entam... 42 0.019 3
(AL049184) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 36 0.019 17
(AZ531291) ENTBQ34TR Entamoeba histolytica Sheared DNA Entam... 42 0.020 3
(AZ669474) ENTIY88TR Entamoeba histolytica Sheared DNA Entam... 42 0.021 3
(AZ548467) ENTEK30TR Entamoeba histolytica Sheared DNA Entam... 42 0.022 3

>(BJ378382) Dictyostelium discoideum cDNA clone:ddc31c19, 3' end,
single read.
Length = 680

Score = 1304 bits (658), Expect(2) = 0.0
Identities = 658/658 (100%)
Strand = Plus / Minus


Query: 1496 gaaatagtgagtgtaatatattagaaggtttaaatgaagatcaatacaaagaattaagaa 1555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gaaatagtgagtgtaatatattagaaggtttaaatgaagatcaatacaaagaattaagaa 621


Query: 1556 gatcagtagttcaattgattttagcaactgatatgcaaaatcattttgaacatactaata 1615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gatcagtagttcaattgattttagcaactgatatgcaaaatcattttgaacatactaata 561


Query: 1616 aatttcaacatcatttaaataatttaccatttgatagaaataaaaaagaagatagacaaa 1675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aatttcaacatcatttaaataatttaccatttgatagaaataaaaaagaagatagacaaa 501


Query: 1676 tgattttaaatttcttaataaagtgcggtgatatttcaaatattgcaagaccatggcatt 1735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgattttaaatttcttaataaagtgcggtgatatttcaaatattgcaagaccatggcatt 441


Query: 1736 taaattttgaatggtctttaagagtttcagatgaatttttccaacaatcacattatgaaa 1795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taaattttgaatggtctttaagagtttcagatgaatttttccaacaatcacattatgaaa 381


Query: 1796 ctatttgtggttatccagttacaccatttatggataaaaccaaaaccacaagagcaagaa 1855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctatttgtggttatccagttacaccatttatggataaaaccaaaaccacaagagcaagaa 321


Query: 1856 tcgcagcggatttcatagatttcgttgcatcacctcttttccaaagtatggcaaagttct 1915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tcgcagcggatttcatagatttcgttgcatcacctcttttccaaagtatggcaaagttct 261


Query: 1916 taaaagaaagtcaattcctattaaaggtaattagtaaaaatcgtgaaaattggcaagcat 1975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 taaaagaaagtcaattcctattaaaggtaattagtaaaaatcgtgaaaattggcaagcat 201


Query: 1976 acatggaattacaaaaagaaggtaaatgtaatgatgatgatctccaatttatggaagatc 2035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 acatggaattacaaaaagaaggtaaatgtaatgatgatgatctccaatttatggaagatc 141


Query: 2036 caacaattttggttaaatcaaaattaccaaaaattgatgaagaagaaaatagagataaag 2095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 caacaattttggttaaatcaaaattaccaaaaattgatgaagaagaaaatagagataaag 81


Query: 2096 tttcttcatcatcatcttcttcgaccgctcctttaacttcaacttcttcttcaaataa 2153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 tttcttcatcatcatcttcttcgaccgctcctttaacttcaacttcttcttcaaataa 23

Score = 30.2 bits (15), Expect(2) = 0.0
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 2156 aaacttcatcatcat 2170
|||||||||||||||
Sbjct: 21 aaacttcatcatcat 7

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,887,393,469
Number of extensions: 194641784
Number of successful extensions: 18257229
Number of sequences better than 10.0: 1354
Length of query: 2269
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 2245
Effective length of database: 97,308,875,965
Effective search space: 218458426541425
Effective search space used: 218458426541425
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 6.29
Homology vs Protein
Query= Contig-U11059-1 (Contig-U11059-1Q) /CSM_Contig/Contig-U11059-1Q.Seq.d
(2269 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q23917) RecName: Full=3',5'-cyclic-nucleotide phosphodiesterase... 870 0.0
(O70628) RecName: Full=High affinity cGMP-specific 3',5'-cyclic ... 151 1e-34
AX876461_1(AX876461|pid:none) Sequence 11366 from Patent EP10746... 150 3e-34
AK168143_1(AK168143|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 149 4e-34
AY196312_1(AY196312|pid:none) Homo sapiens phosphodiesterase PDE... 148 7e-34
FJ914626_1(FJ914626|pid:none) Macaca mulatta cGMP-specific phosp... 148 7e-34
AY196301_1(AY196301|pid:none) Homo sapiens phosphodiesterase PDE... 148 7e-34
AY196300_1(AY196300|pid:none) Homo sapiens phosphodiesterase PDE... 148 7e-34
BT007749_1(BT007749|pid:none) Synthetic construct Homo sapiens p... 148 7e-34
AF067226_1(AF067226|pid:none) Homo sapiens cGMP phosphodiesteras... 148 7e-34
AF067225_1(AF067225|pid:none) Homo sapiens cGMP phosphodiesteras... 148 7e-34
AK294112_1(AK294112|pid:none) Homo sapiens cDNA FLJ55527 complet... 148 7e-34
AY196305_1(AY196305|pid:none) Homo sapiens phosphodiesterase PDE... 148 7e-34
AY196303_1(AY196303|pid:none) Homo sapiens phosphodiesterase PDE... 148 7e-34
AY196304_1(AY196304|pid:none) Homo sapiens phosphodiesterase PDE... 148 7e-34
AF372654_1(AF372654|pid:none) Rattus norvegicus cGMP phosphodies... 144 1e-32
BX548038_4(BX548038|pid:none) Zebrafish DNA sequence from clone ... 142 4e-32
EU344791_1(EU344791|pid:none) Euprymna scolopes light organ phos... 141 9e-32
FN357551_23(FN357551|pid:none) Schistosoma mansoni genome sequen... 140 3e-31
AM910996_202(AM910996|pid:none) Plasmodium knowlesi strain H chr... 137 2e-30
CR361548_1(CR361548|pid:none) Zebrafish DNA sequence from clone ... 136 3e-30
AE014298_1895(AE014298|pid:none) Drosophila melanogaster chromos... 130 3e-28
BC048317_1(BC048317|pid:none) Homo sapiens phosphodiesterase 8A,... 127 2e-27
(O60658) RecName: Full=High affinity cAMP-specific and IBMX-inse... 127 2e-27
AF388185_1(AF388185|pid:none) Homo sapiens cAMP phosphodiesteras... 127 2e-27
DQ231561_1(DQ231561|pid:none) Trypanosoma cruzi cAMP phosphodies... 126 3e-27
CP000080_251(CP000080|pid:none) Leishmania major strain Friedlin... 126 3e-27
AM502247_279(AM502247|pid:none) Leishmania infantum chromosome 29. 126 3e-27
AL831924_1(AL831924|pid:none) Homo sapiens mRNA; cDNA DKFZp761F1... 126 4e-27
AB085827_1(AB085827|pid:none) Homo sapiens HSPDE8B4 mRNA for pho... 126 4e-27
EF644173_1(EF644173|pid:none) Mus musculus IBMX-insensitive phos... 126 4e-27
AB085825_1(AB085825|pid:none) Homo sapiens HSPDE8B2 mRNA for pho... 126 4e-27
AK083166_1(AK083166|pid:none) Mus musculus adult male hippocampu... 126 4e-27
AK138301_1(AK138301|pid:none) Mus musculus adult male hypothalam... 126 4e-27
JE0293(JE0293)3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.... 126 4e-27
AY129948_1(AY129948|pid:none) Homo sapiens cAMP-specific phospho... 126 4e-27
AB092697_1(AB092697|pid:none) Rattus norvegicus RNPDE8B mRNA for... 126 4e-27
(P14644) RecName: Full=cAMP-specific 3',5'-cyclic phosphodiester... 126 4e-27
AY423729_1(AY423729|pid:none) Homo sapiens proliferation-inducin... 126 4e-27
(O95263) RecName: Full=High affinity cAMP-specific and IBMX-inse... 126 4e-27
BC035144_1(BC035144|pid:none) Homo sapiens phosphodiesterase 8B,... 125 5e-27
AK002074_1(AK002074|pid:none) Homo sapiens cDNA FLJ11212 fis, cl... 125 7e-27
JC7898(JC7898)3',5'-cyclic nucleotide phosphodiesterase (EC 3.1.... 125 7e-27
(Q3UEI1) RecName: Full=cAMP-specific 3',5'-cyclic phosphodiester... 125 9e-27
M25347_1(M25347|pid:none) Rat cyclic nucleotide phosphodiesteras... 123 3e-26
AB092696_1(AB092696|pid:none) Rattus norvegicus RNPDE8A mRNA for... 122 4e-26
CP000583_470(CP000583|pid:none) Ostreococcus lucimarinus CCE9901... 122 7e-26
AC159446_18(AC159446|pid:none) Trypanosoma brucei chromosome 3 c... 122 7e-26
AF157816_1(AF157816|pid:none) Homo sapiens cAMP specific phospho... 121 1e-25
AC005759_3(AC005759|pid:none) Homo sapiens chromosome 19, cosmid... 121 1e-25
U66347_1(U66347|pid:none) Homo sapiens cAMP phosphodiesterase (P... 121 1e-25
(Q08493) RecName: Full=cAMP-specific 3',5'-cyclic phosphodiester... 121 1e-25
AC005759_4(AC005759|pid:none) Homo sapiens chromosome 19, cosmid... 121 1e-25
AF157816_2(AF157816|pid:none) Homo sapiens cAMP specific phospho... 121 1e-25
U66346_1(U66346|pid:none) Homo sapiens cAMP phosphodiesterase (P... 121 1e-25
AC005759_5(AC005759|pid:none) Homo sapiens chromosome 19, cosmid... 121 1e-25
BC109068_1(BC109068|pid:none) Homo sapiens phosphodiesterase 4C,... 121 1e-25
U88713_1(U88713|pid:none) Human phosphodiesterase 4C mRNA, parti... 121 1e-25
A52075_1(A52075|pid:none) Sequence 31 from Patent WO9620281. &U... 121 1e-25
U66349_1(U66349|pid:none) Homo sapiens cAMP phosphodiesterase (P... 121 1e-25
AF157816_3(AF157816|pid:none) Homo sapiens cAMP specific phospho... 121 1e-25
AE014134_2187(AE014134|pid:none) Drosophila melanogaster chromos... 121 1e-25
AE014134_2186(AE014134|pid:none) Drosophila melanogaster chromos... 121 1e-25
AY084186_1(AY084186|pid:none) Drosophila melanogaster RE69157 fu... 121 1e-25
AE014134_2185(AE014134|pid:none) Drosophila melanogaster chromos... 121 1e-25
AE014134_2184(AE014134|pid:none) Drosophila melanogaster chromos... 121 1e-25
BC129238_1(BC129238|pid:none) Danio rerio zgc:158458, mRNA (cDNA... 120 2e-25
(O88502) RecName: Full=High affinity cAMP-specific and IBMX-inse... 120 3e-25
AB017024_1(AB017024|pid:none) Ephydatia fluviatilis mRNA for EFP... 120 3e-25
AK160843_1(AK160843|pid:none) Mus musculus adult male brain cDNA... 119 5e-25
(O89084) RecName: Full=cAMP-specific 3',5'-cyclic phosphodiester... 119 5e-25
AY462262_1(AY462262|pid:none) Leishmania major cAMP-specific pho... 119 6e-25
BX510928_1(BX510928|pid:none) Zebrafish DNA sequence from clone ... 118 8e-25
AF012074_1(AF012074|pid:none) Homo sapiens cAMP-specific phospho... 118 8e-25
U50157_1(U50157|pid:none) Human cAMP-specific phosphodiesterase ... 118 8e-25
AK081466_1(AK081466|pid:none) Mus musculus 16 days embryo head c... 118 8e-25
AX283135_1(AX283135|pid:none) Sequence 23 from Patent WO0179526. 118 8e-25
AF536975_1(AF536975|pid:none) Homo sapiens cAMP-specific phospho... 118 8e-25
DQ665897_1(DQ665897|pid:none) Mus musculus cAMP-specific phospho... 118 8e-25
CS490440_1(CS490440|pid:none) Sequence 25 from Patent WO20060267... 118 8e-25
CT033775_1(CT033775|pid:none) Mouse DNA sequence from clone RP24... 118 8e-25
(Q01063) RecName: Full=cAMP-specific 3',5'-cyclic phosphodiester... 118 8e-25
DQ665896_1(DQ665896|pid:none) Mus musculus cAMP-specific phospho... 118 8e-25
BC027224_1(BC027224|pid:none) Mus musculus phosphodiesterase 4A,... 118 8e-25
AX024032_1(AX024032|pid:none) Sequence 1 from Patent WO0023091. 118 8e-25
U50159_1(U50159|pid:none) Human cAMP-specific phosphodiesterase ... 118 8e-25
AY388962_1(AY388962|pid:none) Mus musculus cAMP-specific phospho... 118 8e-25
AF012073_1(AF012073|pid:none) Homo sapiens cAMP-specific phospho... 118 8e-25
AF536977_1(AF536977|pid:none) Homo sapiens cAMP-specific phospho... 118 1e-24
(Q61481) RecName: Full=Calcium/calmodulin-dependent 3',5'-cyclic... 117 1e-24
AL928607_4(AL928607|pid:none) Mouse DNA sequence from clone RP23... 117 1e-24
AL928607_3(AL928607|pid:none) Mouse DNA sequence from clone RP23... 117 1e-24
AK043647_1(AK043647|pid:none) Mus musculus 10 days neonate corte... 117 1e-24
AM502236_110(AM502236|pid:none) Leishmania infantum chromosome 18. 117 2e-24
FN357336_6(FN357336|pid:none) Schistosoma mansoni genome sequenc... 117 2e-24
U01280_2(U01280|pid:none) Rattus norvegicus Wistar 3',5'-cyclic ... 117 2e-24
I61259(I61259;A53678;I67943)3',5'-cyclic-nucleotide phosphodiest... 117 2e-24
L27059_1(L27059|pid:none) Rattus norvegicus phosphodiesterase mR... 117 2e-24
U09456_1(U09456|pid:none) Rattus norvegicus 3',5'-cyclic AMP pho... 117 2e-24
(Q01061) RecName: Full=Calcium/calmodulin-dependent 3',5'-cyclic... 117 2e-24
AF536974_1(AF536974|pid:none) Rattus norvegicus cAMP-specific ph... 117 2e-24
AK004772_1(AK004772|pid:none) Mus musculus adult male lung cDNA,... 117 2e-24
L27060_1(L27060|pid:none) Rattus norvegicus phosphodiesterase mR... 117 2e-24
U09457_1(U09457|pid:none) Rattus norvegicus 3',5'-cyclic AMP pho... 117 2e-24
(Q01065) RecName: Full=Calcium/calmodulin-dependent 3',5'-cyclic... 117 2e-24
BC058531_1(BC058531|pid:none) Mus musculus phosphodiesterase 1B,... 117 2e-24
AF536979_1(AF536979|pid:none) Rattus norvegicus cAMP-specific ph... 117 2e-24
B53109(B53109;A34414;C33904;I67944) 3',5'-cyclic-nucleotide phos... 117 2e-24
AY388961_1(AY388961|pid:none) Rattus norvegicus cAMP-specific ph... 117 2e-24
AE013599_3875(AE013599|pid:none) Drosophila melanogaster chromos... 116 3e-24
(Q01066) RecName: Full=Calcium/calmodulin-dependent 3',5'-cyclic... 116 3e-24
AE013599_3873(AE013599|pid:none) Drosophila melanogaster chromos... 116 3e-24
AB060237_1(AB060237|pid:none) Macaca fascicularis brain cDNA clo... 116 3e-24
AE013599_3870(AE013599|pid:none) Drosophila melanogaster chromos... 116 3e-24
(Q9N2V9) RecName: Full=Probable 3',5'-cyclic phosphodiesterase p... 116 3e-24
(Q01064) RecName: Full=Calcium/calmodulin-dependent 3',5'-cyclic... 116 4e-24
AK295657_1(AK295657|pid:none) Homo sapiens cDNA FLJ59536 complet... 116 4e-24
AK302899_1(AK302899|pid:none) Homo sapiens cDNA FLJ54120 complet... 116 4e-24
AL132949_1(AL132949|pid:none) Caenorhabditis elegans YAC Y53F4B,... 116 4e-24
AL132949_2(AL132949|pid:none) Caenorhabditis elegans YAC Y53F4B,... 116 4e-24
AB038224_2(AB038224|pid:none) Homo sapiens HSPDE1A gene for calm... 116 4e-24
(Q8I0P7) RecName: Full=Probable 3',5'-cyclic phosphodiesterase p... 116 4e-24
AK126899_1(AK126899|pid:none) Homo sapiens cDNA FLJ44951 fis, cl... 116 4e-24
CR859715_1(CR859715|pid:none) Pongo abelii mRNA; cDNA DKFZp469I1... 116 4e-24
AK301720_1(AK301720|pid:none) Homo sapiens cDNA FLJ54988 complet... 116 4e-24
AK294239_1(AK294239|pid:none) Homo sapiens cDNA FLJ56062 complet... 116 4e-24
AB038224_7(AB038224|pid:none) Homo sapiens HSPDE1A gene for calm... 116 4e-24
AL132949_4(AL132949|pid:none) Caenorhabditis elegans YAC Y53F4B,... 116 4e-24
AB038224_4(AB038224|pid:none) Homo sapiens HSPDE1A gene for calm... 116 4e-24
AF327838_1(AF327838|pid:none) Rattus norvegicus phosphodiesteras... 115 5e-24
AF252536_1(AF252536|pid:none) Canis familiaris calmodulin-activa... 115 5e-24
B33904(B33904)cAMP phosphodiesterase 2 - rat (fragment) 115 5e-24
AX283113_1(AX283113|pid:none) Sequence 1 from Patent WO0179526. 115 7e-24
AX283141_1(AX283141|pid:none) Sequence 29 from Patent WO0179526. 115 7e-24
M26715_1(M26715|pid:none) Rat cAMP phosphodiesterase mRNA, compl... 115 7e-24
S75213_1(S75213|pid:none) type-IVA cyclic AMP specific phosphodi... 115 7e-24
AF073745_1(AF073745|pid:none) Homo sapiens cyclic AMP-specific p... 115 7e-24
(P54748) RecName: Full=cAMP-specific 3',5'-cyclic phosphodiester... 115 7e-24
U18087_1(U18087|pid:none) Human 3',5'-cyclic AMP phosphodiestera... 115 7e-24
AY593872_1(AY593872|pid:none) Homo sapiens cAMP-specific phospho... 115 7e-24
(P27815) RecName: Full=cAMP-specific 3',5'-cyclic phosphodiester... 115 7e-24
AX283115_1(AX283115|pid:none) Sequence 3 from Patent WO0179526. 115 7e-24
L36467_1(L36467|pid:none) Rattus norvegicus 3',5'-cyclic AMP pho... 115 7e-24
I67946(I67946;A32558;B32558;C32558) 3',5'-cyclic-nucleotide phos... 115 7e-24
AL732551_4(AL732551|pid:none) Mouse DNA sequence from clone RP23... 115 9e-24
AF208023_1(AF208023|pid:none) Mus musculus cAMP-specific phospho... 115 9e-24
BC007155_1(BC007155|pid:none) Mus musculus phosphodiesterase 4B,... 115 9e-24
AF326555_1(AF326555|pid:none) Mus musculus C57BL/6J phosphodiest... 115 9e-24
AF202733_1(AF202733|pid:none) Rattus norvegicus cAMP-specific ph... 115 9e-24
M25350_1(M25350|pid:none) Rat cAMP phosphodiesterase (PDE4) mRNA... 115 9e-24
A40949(A40949;D33904;A53109;I67942) cyclic-AMP phosphodiesterase... 115 9e-24
AL732551_1(AL732551|pid:none) Mouse DNA sequence from clone RP23... 115 9e-24
AF202732_1(AF202732|pid:none) Rattus norvegicus cAMP-specific ph... 115 9e-24
AK161341_1(AK161341|pid:none) Mus musculus adult male testis cDN... 115 9e-24
CR859240_1(CR859240|pid:none) Pongo abelii mRNA; cDNA DKFZp459K0... 115 9e-24
(P14646) RecName: Full=cAMP-specific 3',5'-cyclic phosphodiester... 115 9e-24
BC085704_1(BC085704|pid:none) Rattus norvegicus phosphodiesteras... 115 9e-24
AJ632303_4(AJ632303|pid:none) Sus scrofa partial ICAM3 gene, TYK... 114 1e-23
BC135159_1(BC135159|pid:none) Xenopus tropicalis phosphodiestera... 114 2e-23
Z81114_6(Z81114|pid:none) Caenorhabditis elegans Cosmid T04D3, c... 114 2e-23
(O18696) RecName: Full=Probable 3',5'-cyclic phosphodiesterase p... 114 2e-23
BC136144_1(BC136144|pid:none) Xenopus tropicalis hypothetical pr... 113 3e-23
CS490428_1(CS490428|pid:none) Sequence 13 from Patent WO20060267... 113 3e-23
(Q07343) RecName: Full=cAMP-specific 3',5'-cyclic phosphodiester... 113 3e-23
AB209081_1(AB209081|pid:none) Homo sapiens mRNA for phosphodiest... 113 3e-23
AK294441_1(AK294441|pid:none) Homo sapiens cDNA FLJ56619 complet... 113 3e-23
L12686_1(L12686|pid:none) Homo sapiens 3',5'-cyclic AMP phosphod... 113 3e-23
AK290006_1(AK290006|pid:none) Homo sapiens cDNA FLJ75521 complet... 113 3e-23
AK290206_1(AK290206|pid:none) Homo sapiens cDNA FLJ75295 complet... 113 3e-23
BC123449_1(BC123449|pid:none) Bos taurus nucleotide phosphodiest... 113 3e-23
(P14100) RecName: Full=Calcium/calmodulin-dependent 3',5'-cyclic... 113 3e-23
AY233464_1(AY233464|pid:none) Trypanosoma cruzi cAMP phosphodies... 112 4e-23
AY372760_1(AY372760|pid:none) Trypanosoma cruzi cyclic nucleotid... 112 4e-23
U28729_1(U28729|pid:none) Caenorhabditis elegans cosmid R153, co... 112 6e-23
U28729_2(U28729|pid:none) Caenorhabditis elegans cosmid R153, co... 112 6e-23
BC129010_1(BC129010|pid:none) Xenopus tropicalis hypothetical pr... 112 6e-23
U28729_3(U28729|pid:none) Caenorhabditis elegans cosmid R153, co... 112 6e-23
T16769(T16769) hypothetical protein R153.1 - Caenorhabditis eleg... 112 6e-23
(Q22000) RecName: Full=Probable 3',5'-cyclic phosphodiesterase p... 112 6e-23
AM494952_125(AM494952|pid:none) Leishmania braziliensis chromoso... 112 8e-23
AY162269_1(AY162269|pid:none) Dictyostelium discoideum cGMP-spec... 112 8e-23
X55167_1(X55167|pid:none) D.melanogaster dunce gene, exon 5. 112 8e-23
(B0G0Y8) RecName: Full=cGMP-specific 3',5'-cGMP phosphodiesteras... 112 8e-23
M14982_1(M14982|pid:none) Drosophila melanogaster learning/memor... 112 8e-23
(Q8IRU4) RecName: Full=cAMP-specific 3',5'-cyclic phosphodiester... 111 1e-22
AE014298_525(AE014298|pid:none) Drosophila melanogaster chromoso... 111 1e-22
AE014298_533(AE014298|pid:none) Drosophila melanogaster chromoso... 111 1e-22
(Q9NF62) RecName: Full=cAMP-specific 3',5'-cyclic phosphodiester... 111 1e-22
AY119147_1(AY119147|pid:none) Drosophila melanogaster RE53611 fu... 111 1e-22
(Q9W4T0) RecName: Full=cAMP-specific 3',5'-cyclic phosphodiester... 111 1e-22
AE014298_529(AE014298|pid:none) Drosophila melanogaster chromoso... 111 1e-22
BC099362_1(BC099362|pid:none) Xenopus laevis hypothetical protei... 111 1e-22
(Q9W4S9) RecName: Full=cAMP-specific 3',5'-cyclic phosphodiester... 111 1e-22
AE014298_531(AE014298|pid:none) Drosophila melanogaster chromoso... 111 1e-22
AE014298_524(AE014298|pid:none) Drosophila melanogaster chromoso... 111 1e-22
AY702616_1(AY702616|pid:none) Leishmania braziliensis cyclic nuc... 109 4e-22
AM502233_147(AM502233|pid:none) Leishmania infantum chromosome 15. 109 5e-22
AM494952_148(AM494952|pid:none) Leishmania braziliensis chromoso... 108 6e-22
AF263280_1(AF263280|pid:none) Trypanosoma brucei cyclic nucleoti... 108 6e-22
AM502233_146(AM502233|pid:none) Leishmania infantum chromosome 15. 108 8e-22
AY462263_1(AY462263|pid:none) Leishmania major class I phosphodi... 108 1e-21
AM910995_82(AM910995|pid:none) Plasmodium knowlesi strain H chro... 106 4e-21
(Q9QXQ1) RecName: Full=cAMP-specific 3',5'-cyclic phosphodiester... 105 5e-21
FN357313_10(FN357313|pid:none) Schistosoma mansoni genome sequen... 105 7e-21
AK094180_1(AK094180|pid:none) Homo sapiens cDNA FLJ36861 fis, cl... 105 7e-21
AK014887_1(AK014887|pid:none) Mus musculus adult male testis cDN... 105 7e-21
AK029531_1(AK029531|pid:none) Mus musculus adult male testis cDN... 105 7e-21
L76946_1(L76946|pid:none) Mus musculus calmodulin-dependent phos... 105 7e-21
(Q63421) RecName: Full=Calcium/calmodulin-dependent 3',5'-cyclic... 105 7e-21
BC022479_1(BC022479|pid:none) Homo sapiens phosphodiesterase 1C,... 105 9e-21
CR857930_1(CR857930|pid:none) Pongo abelii mRNA; cDNA DKFZp469O2... 105 9e-21
U40371_1(U40371|pid:none) Human 3',5' cyclic nucleotide phosphod... 105 9e-21
AK091734_1(AK091734|pid:none) Homo sapiens cDNA FLJ34415 fis, cl... 105 9e-21
(Q14123) RecName: Full=Calcium/calmodulin-dependent 3',5'-cyclic... 105 9e-21
U40372_1(U40372|pid:none) Human 3',5' cyclic nucleotide phosphod... 105 9e-21
AC006377_1(AC006377|pid:none) Homo sapiens BAC clone RP11-450H7 ... 105 9e-21
BC087549_1(BC087549|pid:none) Xenopus laevis hypothetical LOC496... 104 1e-20
AB057411_1(AB057411|pid:none) Rattus norvegicus RNPDE7B mRNA for... 104 2e-20
AB057410_1(AB057410|pid:none) Rattus norvegicus RNPDE7B mRNA for... 104 2e-20
AF161582_1(AF161582|pid:none) Sus scrofa cyclic nucleotide phosp... 103 2e-20
EF673785_1(EF673785|pid:none) Plasmodium falciparum 3D7 cyclic n... 103 3e-20
AE014188_95(AE014188|pid:none) Plasmodium falciparum 3D7 chromos... 103 3e-20
(Q9Z0X4) RecName: Full=cGMP-inhibited 3',5'-cyclic phosphodieste... 103 4e-20
AB384352_1(AB384352|pid:none) Synthetic construct DNA, clone: pF... 102 5e-20
(Q9NP56) RecName: Full=cAMP-specific 3',5'-cyclic phosphodiester... 102 5e-20
(Q62865) RecName: Full=cGMP-inhibited 3',5'-cyclic phosphodieste... 102 5e-20
AB209990_1(AB209990|pid:none) Homo sapiens mRNA for PDE7B varian... 102 5e-20
AJ005036_1(AJ005036|pid:none) Homo sapiens mRNA for phosphodiest... 102 6e-20
A44093(A44093;S43517)cGMP-inhibited cAMP phosphodiesterase (EC 3... 102 6e-20
FN357376_9(FN357376|pid:none) Schistosoma mansoni genome sequenc... 102 6e-20
U36798_1(U36798|pid:none) Homo sapiens platelet cGI-PDE mRNA, co... 102 6e-20
(Q14432) RecName: Full=cGMP-inhibited 3',5'-cyclic phosphodieste... 102 6e-20
AY099403_1(AY099403|pid:none) Trypanosoma cruzi cyclic nucleotid... 102 8e-20
AJ851613_1(AJ851613|pid:none) Gallus gallus mRNA for hypothetica... 101 1e-19
AX298143_1(AX298143|pid:none) Sequence 1 from Patent WO0183772. 100 2e-19
AB169096_1(AB169096|pid:none) Macaca fascicularis testis cDNA, c... 100 2e-19
(P70453) RecName: Full=High affinity cAMP-specific 3',5'-cyclic ... 100 2e-19
AK154521_1(AK154521|pid:none) Mus musculus NOD-derived CD11c +ve... 100 2e-19
(Q13946) RecName: Full=High affinity cAMP-specific 3',5'-cyclic ... 100 2e-19
AK168957_1(AK168957|pid:none) Mus musculus 17 days pregnant adul... 100 2e-19
AY028446_1(AY028446|pid:none) Trypanosoma brucei class 1 phospho... 100 2e-19
(O08593) RecName: Full=High affinity cAMP-specific 3',5'-cyclic ... 100 3e-19
AX235181_1(AX235181|pid:none) Sequence 3 from Patent WO0162940. 100 4e-19
AC024877_4(AC024877|pid:none) Caenorhabditis elegans cosmid Y95B... 100 4e-19
(Q61409) RecName: Full=cGMP-inhibited 3',5'-cyclic phosphodieste... 99 5e-19
(Q63085) RecName: Full=cGMP-inhibited 3',5'-cyclic phosphodieste... 99 5e-19
BC094486_1(BC094486|pid:none) Xenopus laevis hypothetical protei... 99 7e-19
AF192755_1(AF192755|pid:none) Trypanosoma brucei cyclic nucleoti... 99 7e-19
D50640_1(D50640|pid:none) Homo sapiens gene for phosphodiesteras... 98 1e-18
X95520_1(X95520|pid:none) H.sapiens mRNA for cyclic nucleotide p... 98 1e-18
(Q13370) RecName: Full=cGMP-inhibited 3',5'-cyclic phosphodieste... 98 1e-18
FN357296_80(FN357296|pid:none) Schistosoma mansoni genome sequen... 97 3e-18
AK051102_1(AK051102|pid:none) Mus musculus 9 days embryo whole b... 97 3e-18
CP000875_601(CP000875|pid:none) Herpetosiphon aurantiacus ATCC 2... 93 5e-17
AK122689_1(AK122689|pid:none) Homo sapiens cDNA FLJ16150 fis, cl... 92 6e-17
AL109778_1(AL109778|pid:none) Homo sapiens mRNA full length inse... 92 1e-16
CP001160_357(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 91 2e-16
AY157498_35(AY157498|pid:none) Synechococcus sp. PCC 7942 cosmid... 90 3e-16
AB169454_1(AB169454|pid:none) Macaca fascicularis testis cDNA, c... 90 4e-16
CP001328_108(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 89 5e-16
AP008231_2279(AP008231|pid:none) Synechococcus elongatus PCC 630... 89 7e-16
(A2XFB7) RecName: Full=Two-component response regulator-like PRR... 89 9e-16
AB189043_1(AB189043|pid:none) Oryza sativa Indica Group OsPRR73 ... 89 9e-16
DQ985553_1(DQ985553|pid:none) Sus scrofa cGMP-dependent 3',5'-cy... 88 1e-15
(A2YQ93) RecName: Full=Two-component response regulator-like PRR... 88 2e-15
(Q0D3B6) RecName: Full=Two-component response regulator-like PRR... 88 2e-15
EU971093_1(EU971093|pid:none) Zea mays clone 357381 two-componen... 88 2e-15
AB189042_1(AB189042|pid:none) Oryza sativa Indica Group OsPRR37 ... 88 2e-15
AE017342_116(AE017342|pid:none) Cryptococcus neoformans var. neo... 87 2e-15
AB017022_1(AB017022|pid:none) Ephydatia fluviatilis mRNA for EFP... 87 3e-15
CP000393_3492(CP000393|pid:none) Trichodesmium erythraeum IMS101... 87 3e-15
BC030873_1(BC030873|pid:none) Mus musculus phosphodiesterase 4C,... 86 4e-15
AM910996_203(AM910996|pid:none) Plasmodium knowlesi strain H chr... 86 4e-15
AY810539_1(AY810539|pid:none) Schistosoma japonicum SJCHGC07646 ... 86 4e-15
(Q9VFI9) RecName: Full=cGMP-specific 3',5'-cyclic phosphodiester... 86 6e-15
(B3LVW5) RecName: Full=cGMP-specific 3',5'-cyclic phosphodiester... 86 6e-15
(B4PSS5) RecName: Full=cGMP-specific 3',5'-cyclic phosphodiester... 86 6e-15
(B4QZU1) RecName: Full=cGMP-specific 3',5'-cyclic phosphodiester... 86 6e-15
(B4K9L4) RecName: Full=cGMP-specific 3',5'-cyclic phosphodiester... 86 8e-15
(B4NAL6) RecName: Full=cGMP-specific 3',5'-cyclic phosphodiester... 86 8e-15
AB243684_1(AB243684|pid:none) Lemna gibba LgPRRH37 mRNA for pseu... 85 1e-14
AB243683_1(AB243683|pid:none) Lemna paucicostata LpPRRH95 mRNA f... 84 2e-14
(B4JXX2) RecName: Full=cGMP-specific 3',5'-cyclic phosphodiester... 84 2e-14
(Q1KKS3) RecName: Full=Dual 3',5'-cyclic-AMP and -GMP phosphodie... 84 2e-14
AB243681_1(AB243681|pid:none) Lemna paucicostata LpPRRH37 mRNA f... 84 2e-14
BC149135_1(BC149135|pid:none) Bos taurus phosphodiesterase 7B, m... 84 3e-14
AL844509_216(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 83 4e-14
(Q64395) RecName: Full=Calcium/calmodulin-dependent 3',5'-cyclic... 83 4e-14
AM269963_2(AM269963|pid:none) Aspergillus niger contig An01c0160... 83 5e-14
AC149306_24(AC149306|pid:none) Medicago truncatula clone mth2-88... 82 6e-14
AY811612_1(AY811612|pid:none) Schistosoma japonicum SJCHGC06481 ... 82 6e-14
(O00408) RecName: Full=cGMP-dependent 3',5'-cyclic phosphodieste... 82 8e-14
AK312434_1(AK312434|pid:none) Homo sapiens cDNA, FLJ92780, highl... 82 8e-14
(P16586) RecName: Full=Cone cGMP-specific 3',5'-cyclic phosphodi... 82 8e-14
(Q01062) RecName: Full=cGMP-dependent 3',5'-cyclic phosphodieste... 82 8e-14
AK131525_1(AK131525|pid:none) Homo sapiens cDNA FLJ16750 fis, cl... 82 8e-14
CP001344_543(CP001344|pid:none) Cyanothece sp. PCC 7425, complet... 82 1e-13
(Q6LA42) RecName: Full=Two-component response regulator-like APR... 81 1e-13
M26061_1(M26061|pid:none) Human cGMP phosphodiesterase alpha sub... 81 1e-13
AB046955_1(AB046955|pid:none) Arabidopsis thaliana APRR5 mRNA fo... 81 1e-13
BC029810_1(BC029810|pid:none) Mus musculus phosphodiesterase 2A,... 81 2e-13
(Q922S4) RecName: Full=cGMP-dependent 3',5'-cyclic phosphodieste... 81 2e-13
JC4520(S63688;JC4520) 3',5'-cyclic-GMP phosphodiesterase (EC 3.1... 80 2e-13
AB059361_1(AB059361|pid:none) Rattus norvegicus RNPDE11A3 mRNA f... 80 2e-13
AM746676_3601(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 80 2e-13
U31973_1(U31973|pid:none) Human phosphodiesterase A' subunit (PD... 80 2e-13
(Q8VID6) RecName: Full=Dual 3',5'-cyclic-AMP and -GMP phosphodie... 80 2e-13
BC158125_1(BC158125|pid:none) Mus musculus phosphodiesterase 11A... 80 3e-13
DQ129867_1(DQ129867|pid:none) Uta stansburiana phosphodiesterase... 80 3e-13
(Q91ZQ1) RecName: Full=Cone cGMP-specific 3',5'-cyclic phosphodi... 80 3e-13
AK170395_1(AK170395|pid:none) Mus musculus NOD-derived CD11c +ve... 80 3e-13
(P0C1Q2) RecName: Full=Dual 3',5'-cyclic-AMP and -GMP phosphodie... 80 3e-13
S24462(S41041;S24462)probable 3',5'-cyclic-nucleotide phosphodie... 80 4e-13
Z12017_7(Z12017|pid:none) Caenorhabditis elegans Cosmid R08D7, c... 80 4e-13
Z12017_9(Z12017|pid:none) Caenorhabditis elegans Cosmid R08D7, c... 80 4e-13
CP001032_772(CP001032|pid:none) Opitutus terrae PB90-1, complete... 80 4e-13
(Q8L500) RecName: Full=Two-component response regulator-like APR... 80 4e-13
D88544(D88544)protein R08D7.6 [imported] - Caenorhabditis elegans 80 4e-13
CT573071_2291(CT573071|pid:none) Kuenenia stuttgartiensis genome... 80 4e-13
(Q28263) RecName: Full=Rod cGMP-specific 3',5'-cyclic phosphodie... 80 4e-13
U52868_1(U52868|pid:none) Canis familiaris retinal cyclic-GMP ph... 80 4e-13
(P14099) RecName: Full=cGMP-dependent 3',5'-cyclic phosphodieste... 79 5e-13
L49503_1(L49503|pid:none) Bos taurus cGMP-stimulated phosphodies... 79 5e-13
AC150443_18(AC150443|pid:none) Medicago truncatula chromosome 7 ... 79 5e-13
FP312976_1(FP312976|pid:none) uncultured bacterial clone mtbb227... 79 5e-13
AM910994_347(AM910994|pid:none) Plasmodium knowlesi strain H chr... 79 7e-13
AM392687_1(AM392687|pid:none) Synthetic construct Homo sapiens c... 79 7e-13
AM393814_1(AM393814|pid:none) Synthetic construct Homo sapiens c... 79 7e-13
FJ515452_1(FJ515452|pid:none) Hordeum vulgare subsp. spontaneum ... 79 7e-13
BC122985_1(BC122985|pid:none) Xenopus tropicalis phosphodiestera... 79 7e-13
AM392945_1(AM392945|pid:none) Synthetic construct Homo sapiens c... 79 7e-13
(Q93WK5) RecName: Full=Two-component response regulator-like APR... 79 7e-13
BX842650_37(BX842650|pid:none) Bdellovibrio bacteriovorus comple... 79 9e-13
EU117149_1(EU117149|pid:none) Triticum turgidum genotype GS-105 ... 79 9e-13
BC126233_1(BC126233|pid:none) Homo sapiens phosphodiesterase 5A,... 79 9e-13
DQ885753_1(DQ885753|pid:none) Triticum aestivum cultivar Chinese... 79 9e-13
BC084276_1(BC084276|pid:none) Xenopus laevis hypothetical LOC495... 79 9e-13
L13262_1(L13262|pid:none) Canis familiaris rod cGMP phosphodiest... 79 9e-13
AM393036_1(AM393036|pid:none) Synthetic construct Homo sapiens c... 79 9e-13
AX024038_1(AX024038|pid:none) Sequence 7 from Patent WO0023091. 79 9e-13
A47451(A47451;S34290)3',5'-cyclic-GMP phosphodiesterase (EC 3.1.... 79 9e-13
DQ885754_1(DQ885754|pid:none) Triticum aestivum cultivar Cappell... 79 9e-13
AM393171_1(AM393171|pid:none) Synthetic construct Homo sapiens c... 79 9e-13
AB015656_1(AB015656|pid:none) Homo sapiens mRNA for cGMP-binding... 79 9e-13
AM393270_1(AM393270|pid:none) Synthetic construct Homo sapiens c... 79 9e-13
AJ277995_1(AJ277995|pid:none) Canis familiaris partial pde6B gen... 79 9e-13
FJ515569_1(FJ515569|pid:none) Hordeum vulgare subsp. vulgare cul... 78 1e-12
FJ515499_1(FJ515499|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
AY970705_1(AY970705|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
FJ515422_1(FJ515422|pid:none) Hordeum vulgare subsp. vulgare cul... 78 1e-12
FJ515419_1(FJ515419|pid:none) Hordeum vulgare subsp. vulgare cul... 78 1e-12
FJ515467_1(FJ515467|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
FJ515577_1(FJ515577|pid:none) Hordeum vulgare subsp. vulgare cul... 78 1e-12
FJ515336_1(FJ515336|pid:none) Hordeum vulgare subsp. vulgare cul... 78 1e-12
FJ515431_1(FJ515431|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
FJ515453_1(FJ515453|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
FJ515469_1(FJ515469|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
FJ515539_1(FJ515539|pid:none) Hordeum vulgare subsp. vulgare cul... 78 1e-12
FJ515421_1(FJ515421|pid:none) Hordeum vulgare subsp. vulgare cul... 78 1e-12
FJ515507_1(FJ515507|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
FJ515441_1(FJ515441|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
FJ515464_1(FJ515464|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
(Q8CG03) RecName: Full=cGMP-specific 3',5'-cyclic phosphodiester... 78 1e-12
FJ515510_1(FJ515510|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
FJ515329_1(FJ515329|pid:none) Hordeum vulgare subsp. vulgare cul... 78 1e-12
FJ515458_1(FJ515458|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
FJ515475_1(FJ515475|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
FJ515343_1(FJ515343|pid:none) Hordeum vulgare subsp. vulgare cul... 78 1e-12
FJ515501_1(FJ515501|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
DQ073640_1(DQ073640|pid:none) Strongylocentrotus purpuratus sper... 78 1e-12
BC119137_1(BC119137|pid:none) Mus musculus phosphodiesterase 5A,... 78 1e-12
FJ515430_1(FJ515430|pid:none) Hordeum vulgare subsp. vulgare cul... 78 1e-12
FJ515455_1(FJ515455|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
FJ515511_1(FJ515511|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
FJ515434_1(FJ515434|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
FJ515420_1(FJ515420|pid:none) Hordeum vulgare subsp. vulgare cul... 78 1e-12
FJ515418_1(FJ515418|pid:none) Hordeum vulgare subsp. vulgare cul... 78 1e-12
FJ515423_1(FJ515423|pid:none) Hordeum vulgare subsp. vulgare cul... 78 1e-12
FJ515498_1(FJ515498|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
FJ515432_1(FJ515432|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
FJ515446_1(FJ515446|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
FJ515461_1(FJ515461|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
FJ515437_1(FJ515437|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
BC121494_1(BC121494|pid:none) Xenopus tropicalis phosphodiestera... 78 1e-12
FJ515470_1(FJ515470|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
FJ515443_1(FJ515443|pid:none) Hordeum vulgare subsp. spontaneum ... 78 1e-12
(P52731) RecName: Full=Cone cGMP-specific 3',5'-cyclic phosphodi... 78 2e-12
CP001087_3379(CP001087|pid:none) Desulfobacterium autotrophicum ... 78 2e-12
AB008468_1(AB008468|pid:none) Canis lupus familiaris PDE5 mRNA f... 78 2e-12
CR382136_335(CR382136|pid:none) Debaryomyces hansenii strain CBS... 78 2e-12
DQ885771_1(DQ885771|pid:none) Aegilops tauschii chromosome 2D ps... 77 2e-12
DQ885759_1(DQ885759|pid:none) Triticum aestivum cultivar Cappell... 77 2e-12
DQ885758_1(DQ885758|pid:none) Triticum aestivum cultivar Chinese... 77 2e-12
DQ885766_1(DQ885766|pid:none) Triticum aestivum cultivar Chinese... 77 2e-12
DQ885767_1(DQ885767|pid:none) Triticum aestivum cultivar Ciano 6... 77 2e-12
CP000117_1084(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 77 2e-12
AM393432_1(AM393432|pid:none) Synthetic construct Homo sapiens c... 77 2e-12
DQ885757_1(DQ885757|pid:none) Triticum aestivum cultivar Chinese... 77 2e-12
(Q28156) RecName: Full=cGMP-specific 3',5'-cyclic phosphodiester... 77 3e-12
EU117146_1(EU117146|pid:none) Triticum turgidum genotype GS-100 ... 77 3e-12
CP000590_342(CP000590|pid:none) Ostreococcus lucimarinus CCE9901... 77 3e-12
CP000943_2647(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 77 3e-12
CP000282_665(CP000282|pid:none) Saccharophagus degradans 2-40, c... 77 3e-12
A48719(A48719;A35807)3',5'-cyclic-GMP phosphodiesterase (EC 3.1.... 77 3e-12
DQ060154_1(DQ060154|pid:none) Arabidopsis thaliana ecotype Lands... 77 4e-12
CR522870_645(CR522870|pid:none) Desulfotalea psychrophila LSv54 ... 77 4e-12
(Q9LVG4) RecName: Full=Two-component response regulator-like APR... 77 4e-12
CP000254_955(CP000254|pid:none) Methanospirillum hungatei JF-1, ... 77 4e-12
CP001229_1291(CP001229|pid:none) Sulfurihydrogenibium azorense A... 77 4e-12
CT573071_2292(CT573071|pid:none) Kuenenia stuttgartiensis genome... 77 4e-12
AM393311_1(AM393311|pid:none) Synthetic construct Homo sapiens c... 77 4e-12
AM392735_1(AM392735|pid:none) Synthetic construct Homo sapiens c... 77 4e-12
AK044364_1(AK044364|pid:none) Mus musculus adult retina cDNA, RI... 76 5e-12
BC129923_1(BC129923|pid:none) Mus musculus phosphodiesterase 6B,... 76 5e-12
CP000583_310(CP000583|pid:none) Ostreococcus lucimarinus CCE9901... 76 5e-12
(P23440) RecName: Full=Rod cGMP-specific 3',5'-cyclic phosphodie... 76 5e-12
CP000142_2292(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 76 5e-12
(P62598) RecName: Full=Two-component response regulator ARR12; 76 6e-12
AY044174_1(AY044174|pid:none) Rana pipiens retinal PDE6 alpha su... 76 6e-12
CP000393_571(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 76 6e-12
EF432251_1(EF432251|pid:none) Petromyzon marinus retinal photore... 76 6e-12
CP000749_1074(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 76 6e-12
CP001337_2315(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 76 6e-12
CP000148_2532(CP000148|pid:none) Geobacter metallireducens GS-15... 75 8e-12
AP006841_2131(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 75 8e-12
(B4G4E5) RecName: Full=cGMP-specific 3',5'-cyclic phosphodiester... 75 1e-11
CP001287_3613(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 75 1e-11
CP001230_1464(CP001230|pid:none) Persephonella marina EX-H1, com... 75 1e-11
AY088149_1(AY088149|pid:none) Arabidopsis thaliana clone 41875 m... 75 1e-11
CP001053_3018(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 75 1e-11
CP001291_1977(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 75 1e-11
AM458594_2(AM458594|pid:none) Vitis vinifera contig VV78X201737.... 75 1e-11
AP007255_1840(AP007255|pid:none) Magnetospirillum magneticum AMB... 75 1e-11
(P35913) RecName: Full=Rod cGMP-specific 3',5'-cyclic phosphodie... 75 1e-11
BX663604_5(BX663604|pid:none) Zebrafish DNA sequence from clone ... 75 1e-11
AK295285_1(AK295285|pid:none) Homo sapiens cDNA FLJ50521 complet... 75 1e-11
A42828(A42828;S34590;S18715) 3',5'-cyclic-GMP phosphodiesterase ... 75 1e-11
X90587_1(X90587|pid:none) H.sapiens DNA for Rod cG-PDE gene (exo... 75 1e-11
CP000909_1637(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 75 1e-11
AF534891_1(AF534891|pid:none) Catharanthus roseus type-B respons... 75 1e-11
CP000471_239(CP000471|pid:none) Magnetococcus sp. MC-1, complete... 74 2e-11
AL109687_1(AL109687|pid:none) Homo sapiens mRNA full length inse... 74 2e-11
CR954246_1111(CR954246|pid:none) Pseudoalteromonas haloplanktis ... 74 2e-11
CP000393_2383(CP000393|pid:none) Trichodesmium erythraeum IMS101... 74 2e-11
CP001389_3364(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 74 2e-11
AY889441_1(AY889441|pid:none) Synthetic construct Homo sapiens c... 74 2e-11
DQ683568_1(DQ683568|pid:none) Oryza sativa (japonica cultivar-gr... 74 2e-11
(O54735) RecName: Full=cGMP-specific 3',5'-cyclic phosphodiester... 74 2e-11
DQ431683_1(DQ431683|pid:none) Striga asiatica SRR384 mRNA, compl... 74 3e-11
AP009178_601(AP009178|pid:none) Nitratiruptor sp. SB155-2 genomi... 74 3e-11
CP000407_1902(CP000407|pid:none) Streptococcus suis 05ZYH33, com... 74 3e-11
CP000316_3827(CP000316|pid:none) Polaromonas sp. JS666, complete... 74 3e-11
CP000408_1912(CP000408|pid:none) Streptococcus suis 98HAH33, com... 74 3e-11
CP000777_1462(CP000777|pid:none) Leptospira biflexa serovar Pato... 73 4e-11
CP000776_604(CP000776|pid:none) Campylobacter hominis ATCC BAA-3... 73 4e-11
AE008691_1025(AE008691|pid:none) Thermoanaerobacter tengcongensi... 73 4e-11
CP001089_2760(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 73 4e-11
AP008955_5851(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 73 5e-11
CP000721_4383(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 73 5e-11
DQ431688_1(DQ431688|pid:none) Striga asiatica SRR200 mRNA, compl... 73 5e-11
CP000393_570(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 73 5e-11
CP000139_15(CP000139|pid:none) Bacteroides vulgatus ATCC 8482, c... 73 5e-11
CU459003_1863(CU459003|pid:none) Magnetospirillum gryphiswaldens... 73 5e-11
AF534888_1(AF534888|pid:none) Catharanthus roseus type-A respons... 72 7e-11
CP000909_402(CP000909|pid:none) Chloroflexus aurantiacus J-10-fl... 72 7e-11
CP001390_1700(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 72 7e-11
CP001358_319(CP001358|pid:none) Desulfovibrio desulfuricans subs... 72 7e-11
CP000721_2852(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 72 7e-11
AC151805_12(AC151805|pid:none) Medicago truncatula clone mth2-59... 72 7e-11
CP000127_1216(CP000127|pid:none) Nitrosococcus oceani ATCC 19707... 72 7e-11
CP001124_789(CP001124|pid:none) Geobacter bemidjiensis Bem, comp... 72 7e-11
EF078889_1(EF078889|pid:none) Phaseolus vulgaris type A response... 72 7e-11
(Q9SB04) RecName: Full=Two-component response regulator ARR5; Al... 72 9e-11
AE007317_578(AE007317|pid:none) Streptococcus pneumoniae R6, com... 72 9e-11
CP000494_5448(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 72 9e-11
CP001037_1482(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 72 9e-11
CP000240_1104(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-1... 72 9e-11
CP000921_640(CP000921|pid:none) Streptococcus pneumoniae Taiwan1... 72 9e-11
CP001033_617(CP001033|pid:none) Streptococcus pneumoniae CGSP14,... 72 9e-11
U80032_1(U80032|pid:none) Caenorhabditis elegans cosmid C32E12, ... 72 9e-11
(P91119) RecName: Full=Probable 3',5'-cyclic phosphodiesterase p... 72 9e-11
CP000909_3031(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 72 9e-11
CP000117_3954(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 72 9e-11
AM431252_2(AM431252|pid:none) Vitis vinifera contig VV78X234702.... 72 9e-11
CP000471_3126(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 72 1e-10
AM460059_1(AM460059|pid:none) Vitis vinifera contig VV78X220569.... 72 1e-10
AY874131_1(AY874131|pid:none) Cryptococcus neoformans var. grubi... 72 1e-10
CP001124_2776(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 72 1e-10
BA000039_1664(BA000039|pid:none) Thermosynechococcus elongatus B... 72 1e-10
CP000909_1490(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 72 1e-10
CP001147_2001(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 72 1e-10
AP006838_3(AP006838|pid:none) Oryza sativa Japonica Group genomi... 72 1e-10
CP001037_2637(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 72 1e-10
FJ717710_1(FJ717710|pid:none) Pinus pinea response regulator 1 m... 72 1e-10
CP000254_474(CP000254|pid:none) Methanospirillum hungatei JF-1, ... 72 1e-10
AP008230_460(AP008230|pid:none) Desulfitobacterium hafniense Y51... 72 1e-10
CR954246_918(CR954246|pid:none) Pseudoalteromonas haloplanktis s... 71 1e-10
CP001322_2954(CP001322|pid:none) Desulfatibacillum alkenivorans ... 71 1e-10
CP000749_2002(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 71 1e-10
AF057281_1(AF057281|pid:none) Arabidopsis thaliana two-component... 71 1e-10

>(Q23917) RecName: Full=3',5'-cyclic-nucleotide phosphodiesterase
regA; Short=PDEase regA; EC=3.1.4.53;
AltName: Full=cAMP-specific 3',5'-cAMP phosphodiesterase
2; AltName: Full=Phosphodiesterase 2;
Short=DdPDE2; &AJ005398_1(AJ005398|pid:none)
&U60170_1(U60170|pid:none)
Length = 793

Score = 870 bits (2248), Expect = 0.0
Identities = 491/771 (63%), Positives = 519/771 (67%), Gaps = 83/771 (10%)
Frame = +1

Query: 34 MNNKQEEIDQFLXXXXXXXXXXXXXXXXXXXXXXLKSMISGIENLNVHSKGXXXXXXXXX 213
MNNKQEEIDQFL LKSMISGIENLNVHSKG
Sbjct: 1 MNNKQEEIDQFLSSTSTSPSPSSSSSPSNNDSTSLKSMISGIENLNVHSKGNDNKNNNNN 60

Query: 214 XXXXXXXXXEKQKDIVSLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 393
EKQKDIVSLE
Sbjct: 61 NNNNNSNNNEKQKDIVSLENNSSSNNTTTTTTTTTTSNHNSNNNSNNNNNNINNNNINNN 120

Query: 394 XYEPLVNGHNNGFGDKLNDQPSPSSHRVSDFSDEYSPSKVRILVADDDDVQRKILNNLLK 573
YEPLVNGHNNGFGDKLNDQPSPSSHRVSDFSDEYSPSKVRILVADDDDVQRKILNNLLK
Sbjct: 121 NYEPLVNGHNNGFGDKLNDQPSPSSHRVSDFSDEYSPSKVRILVADDDDVQRKILNNLLK 180

Query: 574 KFHYNVTLVPNGEIAWEYINKGQQKYDLVLTDVMMPHITGFDLLQRINDHPVHRHIPVIL 753
KFHYNVTLVPNGEIAWEYINKGQQKYDLVLTDVMMPHITGFDLLQRINDHPVHRHIPVIL
Sbjct: 181 KFHYNVTLVPNGEIAWEYINKGQQKYDLVLTDVMMPHITGFDLLQRINDHPVHRHIPVIL 240

Query: 754 MSGTAVDYKYANDTIKIGGQDFLTKPIAKELLKKKIDTVLQSIWQRRKEEEYKATLAQER 933
MSGTAVDYKYANDTIKIGGQDFLTKPIAKELLKKKIDTVLQSIWQRRKEEEYKATLAQER
Sbjct: 241 MSGTAVDYKYANDTIKIGGQDFLTKPIAKELLKKKIDTVLQSIWQRRKEEEYKATLAQER 300

Query: 934 EKGNKLAK----------EMELKEHEIGELTKKVSKMSSIS---------KEAMESPLVS 1056
EKGNKLAK E+ K ++ ++K+ + +S K++ S S
Sbjct: 301 EKGNKLAKEMELKEHEIEELTKKVSKMSSISKEAMESPLVSVTRNIEELLKQSSWSHYES 360

Query: 1057 -VTRNIEELLKQSSWSHYESEIKEKL-----------SSILKELGSSNIYR---PSFEKL 1191
+ + +LK+ S+ EKL S ++ E S+ R P+F +
Sbjct: 361 EIKEKLSSILKELGSSNIYRPSFEKLIKNDSVDPVTKSFLVSEFSSTTSRRNSIPTFPQT 420

Query: 1192 IKNDSVDPVTKSFLVSEFSSTTSRRNSIPTFPQTTYNRDTKEVIK--------------- 1326
N V K + F S + +P N E+ K
Sbjct: 421 TYNRDTKEVIKGWEFDVFKY--SEDDLMPLLVDMFENFQLPEIFKIPIEKLQRFIMTVNA 478

Query: 1327 -----------GWEFDVFK--------------YSEDDLMPLLVDM---------FEXXX 1404
FDV + + D+ LL+ F
Sbjct: 479 LYRKNNRYHNFTHAFDVTQTVYTFLTSFNAAQYLTHLDIFALLISCMCHDLNHPGFNNTF 538

Query: 1405 XVNAQTELSLEYNDISVLENHHAMLTFKILRNSECNILEGLNEDQYKELRRSVVQLILAT 1584
VNAQTELSLEYNDISVLENHHAMLTFKILRNSECNILEGLNEDQYKELRRSVVQLILAT
Sbjct: 539 QVNAQTELSLEYNDISVLENHHAMLTFKILRNSECNILEGLNEDQYKELRRSVVQLILAT 598

Query: 1585 DMQNHFEHTNKFQHHLNNLPFDRNKKEDRQMILNFLIKCGDISNIARPWHLNFEWSLRVS 1764
DMQNHFEHTNKFQHHLNNLPFDRNKKEDRQMILNFLIKCGDISNIARPWHLNFEWSLRVS
Sbjct: 599 DMQNHFEHTNKFQHHLNNLPFDRNKKEDRQMILNFLIKCGDISNIARPWHLNFEWSLRVS 658

Query: 1765 DEFFQQSHYETICGYPVTPFMDKTKTTRARIAADFIDFVASPLFQSMAKFLKESQFLLKV 1944
DEFFQQSHYETICGYPVTPFMDKTKTTRARIAADFIDFVASPLFQSMAKFLKESQFLLKV
Sbjct: 659 DEFFQQSHYETICGYPVTPFMDKTKTTRARIAADFIDFVASPLFQSMAKFLKESQFLLKV 718

Query: 1945 ISKNRENWQAYMELQKEGKCNDDDLQFMEDPTILVKSKLPKIDEEENRDKV 2097
ISKNRENWQAYMELQKEGKCNDDDLQFMEDPTILVKSKLPKIDEEENRDKV
Sbjct: 719 ISKNRENWQAYMELQKEGKCNDDDLQFMEDPTILVKSKLPKIDEEENRDKV 769

Lambda K H
0.317 0.133 0.381

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,871,698,189
Number of extensions: 53933797
Number of successful extensions: 185142
Number of sequences better than 10.0: 10873
Number of HSP's gapped: 178195
Number of HSP's successfully gapped: 11207
Length of query: 756
Length of database: 1,040,966,779
Length adjustment: 136
Effective length of query: 620
Effective length of database: 605,184,019
Effective search space: 375214091780
Effective search space used: 375214091780
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.56 alm: 0.41 top: 0.53 tms: 0.00 mit: 0.17 mip: 0.00
nuc: 0.16 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.33 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

56.0 %: nuclear
32.0 %: cytoplasmic
4.0 %: cytoskeletal
4.0 %: mitochondrial
4.0 %: vacuolar

>> prediction for Contig-U11059-1 is nuc

VS (DIR, S) 0
VH (FL, L) 2
VF (FL, S) 0
AH (FL, L) 1
AF (FL, S) 1
SL (DIR, L) 0
SS (DIR, S) 2
SH (FL, L) 2
SF (FL, S) 0
CH (FL, L) 6
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0