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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U11043-1
Contig ID Contig-U11043-1
Contig update 2002.12.18
Contig sequence 
>Contig-U11043-1 (Contig-U11043-1Q) /CSM_Contig/Contig-U11043-1Q.Seq.d
TTTTTGTATTAACAAAATATAGAATTTATTCAATTAAACGTAATAAAGTT
GGTGGTAAAAAACAAGTTCAAAGAGAAAGTCATTTATATAATTTAGTTGA
AATTAGAACTGATGATATTGATAGAGTTGTATTAAAATTTACAACATTTT
CAATTGATATGACAGGTGGTAATATTGGTATAACAATACCAAAATTATTA
ATTAATGCATTTCATAGAATTAGTTTTACATTTTCAAATGAAGCATTACC
AAATTTATTGATATTACCACCAGAGAGAACAGCACCAGAAGTTGATGAGA
TTGATCCAGGTCAATCGCATGGATTCTTTGAAGTGTATAGAGCACAATGT
AATTATTATGATACACCAGTGAATCAAGATTTAATCGATTATTTGGAAGA
GACAGTTAGCAAAGGATCAAGAGTATTCAATTTGGATGATTTTGCAGGTA
TTGATAGAAATAGTGAAGGAGCTGTCAATCTTACACCAGTGTTGGCAGCA
TTAAGACATAATACCTTTTTCGATACATTTGTGTGTCATAATAAGACACG
TAAAGAGATACCATTGTTATTGGCCGACGTTTTCCATCATAATAGAACAT
TGGTCAGAGTTGATCTATCAGGTATCGAATCTGATGATGGTTGGGTGCAA
TTGGGTGACGCCTTGAAAGAGAACCAAACCAATCAATTGGTGTCTTTGAA
TTGTTCAGATAATCGTGTCTCTGATAAGGGTATGAATTCATTGGCAAATG
CAATTCGTTCATTCAATCGTCCATTCTTAGAGTTTATCGCATCAAATGTT
GATTTACAATCAAAGGGTGCATCAATATTCTTTAGAACACTTCAATCGAA
TTATTCATCATCTGGTGCCATTGTACATTTGGATGTTAGTAGAAATGATT
TAGAAAAGATTGGATCGGAATCATTACATGATTGGATCATTCTTTTAAAT
ACTTCAATACCATCACCTAGAAAACCATTGGTTCATATCAATTT------
----TCCAAGCTATGAAAAGAACTTTCACAACCAATCGTACCCTTATCGA
TATACCAGTACCAACCGCTGATATCACTAAAATCCTTAATTCAAACTCTA
AGGATAAGAAACAAATCAATGATAAAATCGGTGAAATCTTGGCTGATGTT
CAAACTTGTCTCTCAAATAATAAAAATGGTATAGCTTATACTGATATACC
TTCAACTACTAAGACAACCGTTGCTATTAGTTCAATTTCAACTCCAAATT
TCCGTGCTTCAACTTATCATAATTCAAGTTCAAATAATTTAGGTAATAGT
GATGATACTTATAATAGAGCAGCTTCAACTCATAATTTATCTTATTCTTC
ACCATCACCTTCAACTTATGCTCCACCACCACCACTTCCAGATGTTTATG
CAAATCATTATCAACAACCACCACCACCTCCACCACAAGAAACTTATGAC
TATAGTCAACAACACCAACAATATGATTATAGTCAACAACAACAACAACA
ACAACAACAATATGATTATAGTCAACAACACACTGATCAACAACAATATG
ATTACCAAGCTCAAGATTATCAAGAAGGTGCAACTACAAATGATTATGAT
CAACAATATCAACAACAAGATTATAGTCAACAACAACAATATGACGATCA
ACAACAACAACAACAACAATATGATGACCAACAACAACATTATGATGATC
AACAACAATAGAAGACGAAAATAGAATGCCACCACCTCCAGAATATTAAA
CATTTTAAATTAA
Gap gap included
Contig length 1753
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 3456680
End point 3458435
Strand (PLUS/MINUS) PLUS
Number of clones 14
Number of EST 22
Link to clone list U11043
List of clone(s) 

est1=CHI879F,-173,267
est2=VHH747F,1,651
est3=AHP430F,27,575
est4=AHI769F,28,671
est5=AHA583F,32,567
est6=VHH658F,33,670
est7=CHK144F,204,835
est8=SLD557F,321,614
est9=AFL291F,439,995
est10=VHH747Z,996,1689
est11=CHQ218Z,1023,1411
est12=CHI879Z,1026,1755
est13=AHI769Z,1036,1632
est14=VHH658Z,1037,1751
est15=CHK144Z,1154,1742
est16=AFL291Z,1157,1734
est17=AHP430Z,1168,1756
est18=AHA583Z,1175,1731
est19=AHH670Z,1264,1420
est20=CHK388Z,1364,1520
est21=CHM218Z,1394,1499
est22=CHS111Z,1421,1562
Translated Amino Acid sequence 
FVLTKYRIYSIKRNKVGGKKQVQRESHLYNLVEIRTDDIDRVVLKFTTFSIDMTGGNIGI
TIPKLLINAFHRISFTFSNEALPNLLILPPERTAPEVDEIDPGQSHGFFEVYRAQCNYYD
TPVNQDLIDYLEETVSKGSRVFNLDDFAGIDRNSEGAVNLTPVLAALRHNTFFDTFVCHN
KTRKEIPLLLADVFHHNRTLVRVDLSGIESDDGWVQLGDALKENQTNQLVSLNCSDNRVS
DKGMNSLANAIRSFNRPFLEFIASNVDLQSKGASIFFRTLQSNYSSSGAIVHLDVSRNDL
EKIGSESLHDWIILLNTSIPSPRKPLVHIN---

---QAMKRTFTTNRTLIDIPVPTADITKILNSNSKDKKQINDKIGEILADVQTCLSNNKN
GIAYTDIPSTTKTTVAISSISTPNFRASTYHNSSSNNLGNSDDTYNRAASTHNLSYSSPS
PSTYAPPPPLPDVYANHYQQPPPPPPQETYDYSQQHQQYDYSQQQQQQQQQYDYSQQHTD
QQQYDYQAQDYQEGATTNDYDQQYQQQDYSQQQQYDDQQQQQQQYDDQQQHYDDQQQ*kt
kiechhlqnikhfkl
Translated Amino Acid sequence (All Frames) 
Frame A:
fly*qniefiqlnviklvvknkfkekviyii*lklelmiliely*nlqhfqli*qvvilv
*qyqny*lmhfielvlhfqmkhyqiy*yyhqreqhqklmrliqvnrmdslkciehnviim
ihq*iki*siiwkrqlakdqeysiwmilqvlieivkelsilhqcwqh*diipfsihlcvi
irhvkryhcywptfsiiiehwseliyqvsnlmmvgcnwvtp*krtkpinwcl*ivqiivs
lirv*ihwqmqfvhsivhs*slshqmliynqrvhqyslehfnriihhlvplyiwmlvemi
*krldrnhymigsff*ilqyhhlenhwfisi---

---skl*kelsqpivplsiyqyqplislksliqtlrirnksmiksvkswlmfklvsqiik
mv*liliylqllrqplllvqfqlqisvlqliiiqvqii*vivmiliieqlqliiylilhh
hlqlmlhhhhfqmfmqiiinnhhhlhhkklmtivnntnnmiivnnnnnnnnnmiivnntl
innnmitklkiikkvqlqmiminninnkiivnnnnmtinnnnnnnmmtnnnimminnnrr
rk*nattsrilniln*

Frame B:
fcinki*nlfn*t**sww*ktsskrksfi*fs*n*n**y**scikiynifn*ydrw*ywy
nntkiin*cis*n*fyifk*sitkfidittrenstrs**d*srsiawil*sv*stm*ll*
ytsesrfnrlfgrds*qriksiqfg*fcry**k**rscqsytsvgsikt*ylfryicvs*
*dt*rdtivigrrfps**nigqs*siryri**wlgaig*rlerepnqsigvfelfr*scl
**gyefigkcnsfiqssilrvyrikc*ftikgcinil*ntsielfiiwchctfgc**k*f
rkdwigiit*ldhsfkyfntit*ktigsyqf---

---psyeknfhnqsypyrytstnr*yh*np*fkl*g*etnq**nr*nlg*csnlslk**k
wysly*ytfny*dnrcy*fnfnskfpcfnls*fkfk*fr****yl**ssfns*filffti
tfnlcsttttsrclckslstttttsttrnl*l*sttpti*l*stttttttti*l*stth*
stti*lpssrlsrrcnyk*l*stisttrl*sttti*rstttttti**ptttl**sttied
enrmppppey*tf*i

Frame C:
FVLTKYRIYSIKRNKVGGKKQVQRESHLYNLVEIRTDDIDRVVLKFTTFSIDMTGGNIGI
TIPKLLINAFHRISFTFSNEALPNLLILPPERTAPEVDEIDPGQSHGFFEVYRAQCNYYD
TPVNQDLIDYLEETVSKGSRVFNLDDFAGIDRNSEGAVNLTPVLAALRHNTFFDTFVCHN
KTRKEIPLLLADVFHHNRTLVRVDLSGIESDDGWVQLGDALKENQTNQLVSLNCSDNRVS
DKGMNSLANAIRSFNRPFLEFIASNVDLQSKGASIFFRTLQSNYSSSGAIVHLDVSRNDL
EKIGSESLHDWIILLNTSIPSPRKPLVHIN---

---QAMKRTFTTNRTLIDIPVPTADITKILNSNSKDKKQINDKIGEILADVQTCLSNNKN
GIAYTDIPSTTKTTVAISSISTPNFRASTYHNSSSNNLGNSDDTYNRAASTHNLSYSSPS
PSTYAPPPPLPDVYANHYQQPPPPPPQETYDYSQQHQQYDYSQQQQQQQQQYDYSQQHTD
QQQYDYQAQDYQEGATTNDYDQQYQQQDYSQQQQYDDQQQQQQQYDDQQQHYDDQQQ*kt
kiechhlqnikhfkl
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U11043-1 (Contig-U11043-1Q)
/CSM_Contig/Contig-U11043-1Q.Seq.d
         (1763 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U11043-1 (Contig-U11043-1Q) /CSM_Contig/Conti...  2825  0.0
Contig-U12168-1 (Contig-U12168-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U13443-1 (Contig-U13443-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U12505-1 (Contig-U12505-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U11500-1 (Contig-U11500-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U10975-1 (Contig-U10975-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U10863-1 (Contig-U10863-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U08409-1 (Contig-U08409-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U00987-1 (Contig-U00987-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U14338-1 (Contig-U14338-1Q) /CSM_Contig/Conti...    38  0.032

>Contig-U11043-1 (Contig-U11043-1Q) /CSM_Contig/Contig-U11043-1Q.Seq.d
          Length = 1763

 Score = 2825 bits (1425), Expect = 0.0
 Identities = 1455/1455 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    tttttgtattaacaaaatatagaatttattcaattaaacgtaataaagttggtggtaaaa 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tttttgtattaacaaaatatagaatttattcaattaaacgtaataaagttggtggtaaaa 60

                                                                        
Query: 61   aacaagttcaaagagaaagtcatttatataatttagttgaaattagaactgatgatattg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   aacaagttcaaagagaaagtcatttatataatttagttgaaattagaactgatgatattg 120

                                                                        
Query: 121  atagagttgtattaaaatttacaacattttcaattgatatgacaggtggtaatattggta 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  atagagttgtattaaaatttacaacattttcaattgatatgacaggtggtaatattggta 180

                                                                        
Query: 181  taacaataccaaaattattaattaatgcatttcatagaattagttttacattttcaaatg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  taacaataccaaaattattaattaatgcatttcatagaattagttttacattttcaaatg 240

                                                                        
Query: 241  aagcattaccaaatttattgatattaccaccagagagaacagcaccagaagttgatgaga 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  aagcattaccaaatttattgatattaccaccagagagaacagcaccagaagttgatgaga 300

                                                                        
Query: 301  ttgatccaggtcaatcgcatggattctttgaagtgtatagagcacaatgtaattattatg 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  ttgatccaggtcaatcgcatggattctttgaagtgtatagagcacaatgtaattattatg 360

                                                                        
Query: 361  atacaccagtgaatcaagatttaatcgattatttggaagagacagttagcaaaggatcaa 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  atacaccagtgaatcaagatttaatcgattatttggaagagacagttagcaaaggatcaa 420

                                                                        
Query: 421  gagtattcaatttggatgattttgcaggtattgatagaaatagtgaaggagctgtcaatc 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  gagtattcaatttggatgattttgcaggtattgatagaaatagtgaaggagctgtcaatc 480

                                                                        
Query: 481  ttacaccagtgttggcagcattaagacataatacctttttcgatacatttgtgtgtcata 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  ttacaccagtgttggcagcattaagacataatacctttttcgatacatttgtgtgtcata 540

                                                                        
Query: 541  ataagacacgtaaagagataccattgttattggccgacgttttccatcataatagaacat 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  ataagacacgtaaagagataccattgttattggccgacgttttccatcataatagaacat 600

                                                                        
Query: 601  tggtcagagttgatctatcaggtatcgaatctgatgatggttgggtgcaattgggtgacg 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  tggtcagagttgatctatcaggtatcgaatctgatgatggttgggtgcaattgggtgacg 660

                                                                        
Query: 661  ccttgaaagagaaccaaaccaatcaattggtgtctttgaattgttcagataatcgtgtct 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661  ccttgaaagagaaccaaaccaatcaattggtgtctttgaattgttcagataatcgtgtct 720

                                                                        
Query: 721  ctgataagggtatgaattcattggcaaatgcaattcgttcattcaatcgtccattcttag 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  ctgataagggtatgaattcattggcaaatgcaattcgttcattcaatcgtccattcttag 780

                                                                        
Query: 781  agtttatcgcatcaaatgttgatttacaatcaaagggtgcatcaatattctttagaacac 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  agtttatcgcatcaaatgttgatttacaatcaaagggtgcatcaatattctttagaacac 840

                                                                        
Query: 841  ttcaatcgaattattcatcatctggtgccattgtacatttggatgttagtagaaatgatt 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841  ttcaatcgaattattcatcatctggtgccattgtacatttggatgttagtagaaatgatt 900

                                                                        
Query: 901  tagaaaagattggatcggaatcattacatgattggatcattcttttaaatacttcaatac 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901  tagaaaagattggatcggaatcattacatgattggatcattcttttaaatacttcaatac 960

                                                                        
Query: 961  catcacctagaaaaccattggttcatatcaatttnnnnnnnnnntccaagctatgaaaag 1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961  catcacctagaaaaccattggttcatatcaatttnnnnnnnnnntccaagctatgaaaag 1020

                                                                        
Query: 1021 aactttcacaaccaatcgtacccttatcgatataccagtaccaaccgctgatatcactaa 1080
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 aactttcacaaccaatcgtacccttatcgatataccagtaccaaccgctgatatcactaa 1080

                                                                        
Query: 1081 aatccttaattcaaactctaaggataagaaacaaatcaatgataaaatcggtgaaatctt 1140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 aatccttaattcaaactctaaggataagaaacaaatcaatgataaaatcggtgaaatctt 1140

                                                                        
Query: 1141 ggctgatgttcaaacttgtctctcaaataataaaaatggtatagcttatactgatatacc 1200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ggctgatgttcaaacttgtctctcaaataataaaaatggtatagcttatactgatatacc 1200

                                                                        
Query: 1201 ttcaactactaagacaaccgttgctattagttcaatttcaactccaaatttccgtgcttc 1260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ttcaactactaagacaaccgttgctattagttcaatttcaactccaaatttccgtgcttc 1260

                                                                        
Query: 1261 aacttatcataattcaagttcaaataatttaggtaatagtgatgatacttataatagagc 1320
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 aacttatcataattcaagttcaaataatttaggtaatagtgatgatacttataatagagc 1320

                                                                        
Query: 1321 agcttcaactcataatttatcttattcttcaccatcaccttcaacttatgctccaccacc 1380
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 agcttcaactcataatttatcttattcttcaccatcaccttcaacttatgctccaccacc 1380

                                                                        
Query: 1381 accacttccagatgtttatgcaaatcattatcaacaaccaccaccacctccaccacaaga 1440
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 accacttccagatgtttatgcaaatcattatcaacaaccaccaccacctccaccacaaga 1440

                           
Query: 1441 aacttatgactatag 1455
            |||||||||||||||
Sbjct: 1441 aacttatgactatag 1455


 Score =  178 bits (90), Expect = 1e-44
 Identities = 90/90 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1511 tatgattatagtcaacaacacactgatcaacaacaatatgattaccaagctcaagattat 1570
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1511 tatgattatagtcaacaacacactgatcaacaacaatatgattaccaagctcaagattat 1570

                                          
Query: 1571 caagaaggtgcaactacaaatgattatgat 1600
            ||||||||||||||||||||||||||||||
Sbjct: 1571 caagaaggtgcaactacaaatgattatgat 1600


 Score =  147 bits (74), Expect = 5e-35
 Identities = 74/74 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1690 ttatgatgatcaacaacaatagaagacgaaaatagaatgccaccacctccagaatattaa 1749
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1690 ttatgatgatcaacaacaatagaagacgaaaatagaatgccaccacctccagaatattaa 1749

                          
Query: 1750 acattttaaattaa 1763
            ||||||||||||||
Sbjct: 1750 acattttaaattaa 1763


 Score = 40.1 bits (20), Expect = 0.008
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1511 tatgattatagtcaacaaca 1530
            ||||||||||||||||||||
Sbjct: 1472 tatgattatagtcaacaaca 1491


 Score = 34.2 bits (17), Expect = 0.49
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                 
Query: 1511 tatgattatagtcaacaacac 1531
            ||||| |||||||||||||||
Sbjct: 1445 tatgactatagtcaacaacac 1465


 Score = 34.2 bits (17), Expect = 0.49
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                 
Query: 1538 caacaacaatatgattaccaa 1558
            ||||||||||||||| |||||
Sbjct: 1661 caacaacaatatgatgaccaa 1681


 Score = 34.2 bits (17), Expect = 0.49
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                             
Query: 1538 caacaacaatatgatta 1554
            |||||||||||||||||
Sbjct: 1502 caacaacaatatgatta 1518


 Score = 34.2 bits (17), Expect = 0.49
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                             
Query: 1514 gattatagtcaacaaca 1530
            |||||||||||||||||
Sbjct: 1619 gattatagtcaacaaca 1635


 Score = 30.2 bits (15), Expect = 7.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 1534 tgatcaacaacaata 1548
            |||||||||||||||
Sbjct: 1696 tgatcaacaacaata 1710


 Score = 30.2 bits (15), Expect = 7.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 1696 tgatcaacaacaata 1710
            |||||||||||||||
Sbjct: 1534 tgatcaacaacaata 1548


>Contig-U12168-1 (Contig-U12168-1Q) /CSM_Contig/Contig-U12168-1Q.Seq.d
          Length = 2480

 Score = 42.1 bits (21), Expect = 0.002
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1271 aattcaagttcaaataattta 1291
            |||||||||||||||||||||
Sbjct: 1895 aattcaagttcaaataattta 1915


>Contig-U13443-1 (Contig-U13443-1Q) /CSM_Contig/Contig-U13443-1Q.Seq.d
          Length = 1411

 Score = 40.1 bits (20), Expect = 0.008
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1417 accaccaccacctccaccac 1436
            ||||||||||||||||||||
Sbjct: 1024 accaccaccacctccaccac 1043


 Score = 34.2 bits (17), Expect = 0.49
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                             
Query: 1369 tgctccaccaccaccac 1385
            |||||||||||||||||
Sbjct: 954  tgctccaccaccaccac 970


 Score = 32.2 bits (16), Expect = 2.0
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 1370 gctccaccaccaccac 1385
            ||||||||||||||||
Sbjct: 922  gctccaccaccaccac 937


 Score = 32.2 bits (16), Expect = 2.0
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 1421 ccaccacctccaccac 1436
            ||||||||||||||||
Sbjct: 1058 ccaccacctccaccac 1073


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 27,123
Number of Sequences: 6905
Number of extensions: 27123
Number of successful extensions: 3544
Number of sequences better than 10.0: 411
length of query: 1763
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1747
effective length of database: 5,564,391
effective search space: 9720991077
effective search space used: 9720991077
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.22
Homology vs DNA 
Query= Contig-U11043-1 (Contig-U11043-1Q) /CSM_Contig/Contig-U11043-1Q.Seq.d
         (1763 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ335018) Dictyostelium discoideum cDNA clone:dda48j17, 5' ...  1269   0.0    1
(BJ422616) Dictyostelium discoideum cDNA clone:ddv46c16, 5' ...  1263   0.0    1
(BJ367344) Dictyostelium discoideum cDNA clone:ddc42g11, 5' ...  1253   0.0    1
(BJ422590) Dictyostelium discoideum cDNA clone:ddv46n11, 5' ...  1140   0.0    2
(BJ328331) Dictyostelium discoideum cDNA clone:dda23e24, 5' ...  1102   0.0    1
(BJ338407) Dictyostelium discoideum cDNA clone:dda61l08, 5' ...  1088   0.0    1
(BJ330797) Dictyostelium discoideum cDNA clone:dda32e21, 5' ...  1063   0.0    1
(BJ380974) Dictyostelium discoideum cDNA clone:ddc39n20, 3' ...   837   0.0    3
(BJ441374) Dictyostelium discoideum cDNA clone:ddv46c16, 3' ...   815   0.0    3
(BJ441347) Dictyostelium discoideum cDNA clone:ddv46n11, 3' ...   743   0.0    5
(BJ352994) Dictyostelium discoideum cDNA clone:dda48j17, 3' ...   648   0.0    3
(BJ385154) Dictyostelium discoideum cDNA clone:ddc54c06, 3' ...   704   0.0    1
(BJ381684) Dictyostelium discoideum cDNA clone:ddc42g11, 3' ...   575   0.0    3
(BJ356777) Dictyostelium discoideum cDNA clone:dda61l08, 3' ...   557   0.0    4
(BJ345473) Dictyostelium discoideum cDNA clone:dda23e24, 3' ...   579   e-178  3
(AU061220) Dictyostelium discoideum slug cDNA, clone SLD557.      583   e-162  1
(BJ348298) Dictyostelium discoideum cDNA clone:dda32e21, 3' ...   476   e-149  4
(BJ366695) Dictyostelium discoideum cDNA clone:ddc39n20, 5' ...   482   e-131  1
(BJ352405) Dictyostelium discoideum cDNA clone:dda46k18, 3' ...   283   1e-71  1
(BJ381880) Dictyostelium discoideum cDNA clone:ddc42p21, 3' ...   155   7e-33  1
(AU052589) Dictyostelium discoideum slug cDNA, clone SLD557.      105   7e-31  2
(BJ386381) Dictyostelium discoideum cDNA clone:ddc58e03, 3' ...    50   9e-09  2
(BJ382834) Dictyostelium discoideum cDNA clone:ddc46c06, 3' ...    72   8e-08  1
(AC106062) Rattus norvegicus clone CH230-142J2, WORKING DRAF...    40   5e-06  3
(DD404166) Method of screening a gene related to a quantity ...    40   2e-05  3
(AL161725) Human DNA sequence from clone RP11-165F24 on chro...    40   2e-05  3
(AC124319) Homo sapiens chromosome 17, clone CTD-2047H16, co...    40   2e-05  3
(CU137653) Human DNA sequence from clone XX-C0511C0695L on c...    40   7e-05  2
(AC178979) Strongylocentrotus purpuratus clone R3-3122D7, WO...    42   2e-04  2
(AC177666) Strongylocentrotus purpuratus clone R3-1017J20, W...    42   2e-04  2
(AP008211) Oryza sativa (japonica cultivar-group) genomic DN...    40   7e-04  2
(AC111410) Rattus norvegicus clone CH230-205L15, WORKING DRA...    40   9e-04  2
(AC137022) Rattus norvegicus clone CH230-unknown, *** SEQUEN...    46   9e-04  2
(AC087455) Homo sapiens, clone RP11-143J24, complete sequence.     46   9e-04  2
(AC122081) Rattus norvegicus clone CH230-352A17, *** SEQUENC...    46   9e-04  2
(AC216612) Echinops telfairi clone CH238-33K5, WORKING DRAFT...    40   9e-04  2
(AC132484) Oryza sativa (japonica cultivar-group) chromosome...    40   9e-04  2
(AP004529) Lotus japonicus genomic DNA, chromosome 2, clone:...    44   0.001  2
(AM753962) Clytia hemisphaerica EST, 5' end sequence, clone ...    40   0.001  2
(AM754588) Clytia hemisphaerica EST, 5' end sequence, clone ...    40   0.001  2
(AM752728) Clytia hemisphaerica EST, 5' end sequence, clone ...    40   0.001  2
(CF674759) tac86h01.x1 Hydra EST -IV Hydra magnipapillata cD...    40   0.001  2
(AC111741) Rattus norvegicus clone CH230-89D23, WORKING DRAF...    44   0.003  2
(AC007263) Homo sapiens chromosome 14 clone RP11-79J20 conta...    40   0.003  2
(AL357093) Human chromosome 14 DNA sequence BAC R-356K23 of ...    40   0.003  2
(AF305060) Dictyostelium discoideum Wiscott-Aldrich syndrome...    40   0.004  2
(EU195079) Clytia hemisphaerica minicollagen 1 mRNA, complet...    38   0.004  2
(DY450999) PCAA-aaa42f04.g2 UCI-12 Podocoryne carnea cDNA 5'...    40   0.004  2
(DY450665) PCAA-aaa25c08.g2 UCI-12 Podocoryne carnea cDNA 5'...    40   0.004  2
(DV205433) PCAA-aaa61d07.g1 UCI-12 Podocoryne carnea cDNA 5'...    40   0.004  2
(BJ435781) Dictyostelium discoideum cDNA clone:ddv28g12, 3' ...    40   0.004  2
(DV204478) HSAA-aaa07c09.g1 UCI-11 Hydra vulgaris cDNA 5', m...    40   0.004  2
(AM753497) Clytia hemisphaerica EST, 5' end sequence, clone ...    38   0.004  2
(AU039281) Dictyostelium discoideum slug cDNA, clone SLH341.       40   0.004  2
(BJ342636) Dictyostelium discoideum cDNA clone:dda14m22, 3' ...    40   0.004  2
(DY452171) PCAA-aaa22e12.g1 UCI-12 Podocoryne carnea cDNA 5'...    40   0.004  2
(AM758282) Clytia hemisphaerica EST, 5' end sequence, clone ...    38   0.004  2
(DY450872) PCAA-aaa28c10.g2 UCI-12 Podocoryne carnea cDNA 5'...    40   0.004  2
(AU262462) Dictyostelium discoideum vegetative cDNA clone:VS...    40   0.004  2
(DY452050) PCAA-aaa107j17.g2 UCI-12 Podocoryne carnea cDNA 5...    40   0.004  2
(DY451170) PCAA-aaa44d07.g2 UCI-12 Podocoryne carnea cDNA 5'...    40   0.004  2
(AM751113) Clytia hemisphaerica EST, 5' end sequence, clone ...    38   0.004  2
(C89964) Dictyostelium discoideum slug cDNA, clone SSG705.         40   0.004  2
(BJ372637) Dictyostelium discoideum cDNA clone:ddc13b13, 3' ...    40   0.004  2
(AM752583) Clytia hemisphaerica EST, 5' end sequence, clone ...    38   0.004  2
(AM752851) Clytia hemisphaerica EST, 5' end sequence, clone ...    38   0.004  2
(BJ340255) Dictyostelium discoideum cDNA clone:dda12f11, 3' ...    40   0.004  2
(AM753699) Clytia hemisphaerica EST, 5' end sequence, clone ...    38   0.004  2
(AM755483) Clytia hemisphaerica EST, 5' end sequence, clone ...    38   0.004  2
(AB082542) Dictyostelium discoideum forA mRNA for formin hom...    40   0.007  4
(CO548273) LyEST5173 Sea lamprey LyEST Petromyzon marinus cD...    46   0.008  2
(CU633263) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   0.010  3
(CU855486) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   0.010  3
(AC134688) Homo sapiens chromosome 17 clone RP11-1387N21 map...    30   0.010  3
(AC127508) Homo sapiens chromosome 17 clone RP13-994H5 map 1...    30   0.010  3
(AC126541) Homo sapiens chromosome 17 clone RP13-182B6 map 1...    30   0.010  3
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...    40   0.011  14
(AC097165) Rattus norvegicus clone CH230-87A12, WORKING DRAF...    40   0.012  2
(AC136856) Rattus norvegicus clone CH230-237B7, *** SEQUENCI...    40   0.012  2
(AC096061) Rattus norvegicus clone CH230-59H10, *** SEQUENCI...    40   0.012  2
(AC098240) Rattus norvegicus clone CH230-1E19, *** SEQUENCIN...    40   0.012  2
(AC095469) Rattus norvegicus clone CH230-7H17, *** SEQUENCIN...    40   0.012  2
(AC126948) Rattus norvegicus clone CH230-119A5, WORKING DRAF...    40   0.012  2
(AC098014) Rattus norvegicus clone CH230-111A3, WORKING DRAF...    40   0.012  2
(AC096181) Rattus norvegicus clone CH230-31L7, *** SEQUENCIN...    40   0.012  2
(AC125998) Rattus norvegicus clone CH230-16E16, WORKING DRAF...    40   0.012  2
(AC113816) Rattus norvegicus clone CH230-224O22, WORKING DRA...    40   0.012  2
(AC098913) Rattus norvegicus clone CH230-182P23, WORKING DRA...    40   0.012  2
(AC095964) Rattus norvegicus clone CH230-11I21, *** SEQUENCI...    40   0.012  2
(AC097168) Rattus norvegicus clone CH230-159E23, *** SEQUENC...    42   0.012  2
(AC093989) Rattus norvegicus clone CH230-86E18, WORKING DRAF...    40   0.012  2
(AC116213) Rattus norvegicus clone CH230-214M13, WORKING DRA...    40   0.012  2
(AC132058) Rattus norvegicus 18 BAC CH230-229M9 (Children's ...    40   0.012  2
(AL645930) Mouse DNA sequence from clone RP23-434L7 on chrom...    40   0.012  2
(AC111962) Rattus norvegicus clone CH230-272J16, *** SEQUENC...    40   0.012  2
(AC127822) Rattus norvegicus clone CH230-263P14, WORKING DRA...    40   0.012  2
(AC094952) Rattus norvegicus clone CH230-6H15, WORKING DRAFT...    40   0.012  2
(AC128375) Rattus norvegicus clone CH230-183C6, *** SEQUENCI...    40   0.012  2
(AC121574) Mus musculus BAC clone RP23-241E9 from 14, comple...    40   0.012  2
(AC108566) Rattus norvegicus clone CH230-263O4, *** SEQUENCI...    40   0.012  2

>(BJ335018) Dictyostelium discoideum cDNA clone:dda48j17, 5' end,
           single read.
          Length = 644

 Score = 1269 bits (640), Expect = 0.0
 Identities = 643/644 (99%)
 Strand = Plus / Plus


Query: 28  attcaattaaacgtaataaagttggtggtaaaaaacaagttcaaagagaaagtcatttat 87
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   attcaattaaacgtaataaagttggtggtaaaaaacaagttcaaagagaaagtcatttat 60


Query: 88  ataatttagttgaaattagaactgatgatattgatagagttgtattaaaatttacaacat 147
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ataatttagttgaaattagaactgatgatattgatagagttgtattaaaatttacaacat 120


Query: 148 tttcaattgatatgacaggtggtaatattggtataacaataccaaaattattaattaatg 207
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttcaattgatatgacaggtggtaatattggtataacaataccaaaattattaattaatg 180


Query: 208 catttcatagaattagttttacattttcaaatgaagcattaccaaatttattgatattac 267
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catttcatagaattagttttacattttcaaatgaagcattaccaaatttattgatattac 240


Query: 268 caccagagagaacagcaccagaagttgatgagattgatccaggtcaatcgcatggattct 327
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caccagagagaacagcaccagaagttgatgagattgatccaggtcaatcgcatggattct 300


Query: 328 ttgaagtgtatagagcacaatgtaattattatgatacaccagtgaatcaagatttaatcg 387
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgaagtgtatagagcacaatgtaattattatgatacaccagtgaatcaagatttaatcg 360


Query: 388 attatttggaagagacagttagcaaaggatcaagagtattcaatttggatgattttgcag 447
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attatttggaagagacagttagcaaaggatcaagagtattcaatttggatgattttgcag 420


Query: 448 gtattgatagaaatagtgaaggagctgtcaatcttacaccagtgttggcagcattaagac 507
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtattgatagaaatagtgaaggggctgtcaatcttacaccagtgttggcagcattaagac 480


Query: 508 ataatacctttttcgatacatttgtgtgtcataataagacacgtaaagagataccattgt 567
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ataatacctttttcgatacatttgtgtgtcataataagacacgtaaagagataccattgt 540


Query: 568 tattggccgacgttttccatcataatagaacattggtcagagttgatctatcaggtatcg 627
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tattggccgacgttttccatcataatagaacattggtcagagttgatctatcaggtatcg 600


Query: 628 aatctgatgatggttgggtgcaattgggtgacgccttgaaagag 671
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aatctgatgatggttgggtgcaattgggtgacgccttgaaagag 644

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,773,990,375
Number of extensions: 108943112
Number of successful extensions: 10121134
Number of sequences better than 10.0: 2426
Length of query: 1763
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1739
Effective length of database: 97,308,875,965
Effective search space: 169220135303135
Effective search space used: 169220135303135
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 6.29
Homology vs Protein 
Query= Contig-U11043-1 (Contig-U11043-1Q) /CSM_Contig/Contig-U11043-1Q.Seq.d
         (1763 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388524_1(AF388524|pid:none) Dictyostelium discoideum carmil ge...    87   2e-15
T02764(T02764) myosin-I binding protein 125 - Acanthamoeba caste...    84   1e-14
AC114263_20(AC114263|pid:none) Dictyostelium discoideum chromoso...    69   7e-10
BC166169_1(BC166169|pid:none) Xenopus tropicalis hypothetical pr...    64   2e-08
FJ009082_1(FJ009082|pid:none) Homo sapiens CARMIL1a (LRRC16A) mR...    62   7e-08
BX088593_3(BX088593|pid:none) Zebrafish DNA sequence from clone ...    62   9e-08
FJ026014_1(FJ026014|pid:none) Homo sapiens CARMIL2b (RLTPR) mRNA...    59   7e-07
AB113647_1(AB113647|pid:none) Homo sapiens RLTPR mRNA for RGD, l...    59   7e-07
(Q5XHY1) RecName: Full=Leucine-rich repeat-containing protein 16B;     54   2e-05
(Q3UFQ8) RecName: Full=Leucine-rich repeat-containing protein 16...    53   3e-05
EU643474_20(EU643474|pid:none) Adineta vaga clone Av240_B G-prot...    50   2e-04
T23427(T23427) hypothetical protein K07G5.1 - Caenorhabditis ele...    50   3e-04
AF081950_1(AF081950|pid:none) Dictyostelium discoideum developme...    49   4e-04
(Q3V3V9) RecName: Full=Leucine-rich repeat-containing protein 16...    49   6e-04
EU643483_23(EU643483|pid:none) Adineta vaga clone Av180_A AIG1-l...    47   0.003
AY437876_1(AY437876|pid:none) Mus musculus CARMIL mRNA, complete...    45   0.011
(Q6EDY6) RecName: Full=Leucine-rich repeat-containing protein 16...    45   0.011
BX908798_1455(BX908798|pid:none) Parachlamydia-related symbiont ...    44   0.014
(Q5DU56) RecName: Full=Protein NLRC3;                                  44   0.025
AK079766_1(AK079766|pid:none) Mus musculus 0 day neonate thymus ...    44   0.025
BC160196_1(BC160196|pid:none) Synthetic construct Mus musculus c...    44   0.025
EU432548_11(EU432548|pid:none) Philodina roseola guanylyl cyclas...    43   0.042
BX908798_1341(BX908798|pid:none) Parachlamydia-related symbiont ...    42   0.055
BC087492_1(BC087492|pid:none) Xenopus laevis hypothetical LOC496...    42   0.071
BC153732_1(BC153732|pid:none) Xenopus tropicalis hypothetical pr...    42   0.071
(Q1ZXD6) RecName: Full=Probable serine/threonine-protein kinase ...    41   0.12
AL929041_1(AL929041|pid:none) Zebrafish DNA sequence from clone ...    41   0.16
BX908798_264(BX908798|pid:none) Parachlamydia-related symbiont U...    40   0.27
AC104642_21(AC104642|pid:none) Trypanosoma brucei chromosome 3 c...    40   0.27
AE2096(AE2096) hypothetical protein alr2324 [imported] - Nostoc ...    39   0.46
EU643473_3(EU643473|pid:none) Adineta vaga clone Av240_A TPR rep...    39   0.46
BC166378_1(BC166378|pid:none) Xenopus tropicalis hypothetical pr...    39   0.46
FN359286_9(FN359286|pid:none) Schistosoma mansoni genome sequenc...    39   0.60
BC153283_1(BC153283|pid:none) Bos taurus chromosome 1 open readi...    38   1.0
(Q8N4P6) RecName: Full=Leucine-rich repeat-containing protein C1...    38   1.3
AK057446_1(AK057446|pid:none) Homo sapiens cDNA FLJ32884 fis, cl...    38   1.3
CP000139_3635(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,...    37   1.8
FP236842_2247(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/9...    35   6.7
FN357587_4(FN357587|pid:none) Schistosoma mansoni genome sequenc...    35   8.7
(Q2NU82) RecName: Full=Dihydroorotate dehydrogenase;          EC...    35   8.7

>AF388524_1(AF388524|pid:none) Dictyostelium discoideum carmil gene,
           complete cds.
          Length = 1050

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 80/323 (24%), Positives = 149/323 (46%), Gaps = 7/323 (2%)
 Frame = +3

Query: 6   VLTKYRIYSIKRNKVGGKKQVQRESHLYNLVEIRTDDIDR--VVLKFTT--FSIDMTGGN 173
           ++TK RI+ +K ++     +V+++ HL ++ EI++   +   +V K     FS  +
Sbjct: 47  LITKNRIFFLKPSQ----NKVKKDIHLLDIQEIKSSTSNEFTIVAKVDNKQFSYGLITNK 102

Query: 174 IGITIPKLLINAFHRISFTFSNEALPNLLILPPERTAPEVDEIDPGQSHGFFEVYRAQCN 353
               I ++ +   H+  F    E+      +   R   E+++ D     GF E Y++ C+
Sbjct: 103 TDEIINQIRVTFNHQF-FGCPEESTFKCTDIKDSRLV-EIEQKDL-PCGGFVETYQSICD 159

Query: 354 YYDTPVNQDLI-DYLEETVSKGSRVFNLDDFAGIDRNSEGAVNLTPVLAALRHNTFFDTF 530
           +   P   D+  D      SK  R FN+ +   I+  +     +  +L AL++N +F +F
Sbjct: 160 HLGVPPRDDICWDMTNIISSKNIRSFNIGE---IELPTSAGDTIRCLLGALKYNNYFKSF 216

Query: 531 VCHNKT-RKEIPLLLADVFHHNRTLVRVDLSGIE-SDDGWVQLGDALKENQTNQLVSLNC 704
             +N T  KE    LA+V   N T+  + L+ +    D    +  AL  N+   L +++
Sbjct: 217 NFNNYTFNKEQFGYLAEVLKCNSTVEDLSLNNVGLKHDTMPIIATALSSNKNLALTAIDI 276

Query: 705 SDNRVSDKGMNSLANAIRSFNRPFLEFIASNVDLQSKGASIFFRTLQSNYSSSGAIVHLD 884
           S+N++ DKGM + ++ + S  R       SN +    G S+    L+ N   S  + +L+
Sbjct: 277 SNNQIEDKGMTAFSSYVASSLRGIASLDVSNTNCNKAGISVLTNALKKNIKMSSTLSYLN 336

Query: 885 VSRNDLEKIGSESLHDWIILLNT 953
           +S N +E  GS  L  ++   NT
Sbjct: 337 LSGNKMEADGSAGLSSFLASPNT 359

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,121,904,774
Number of extensions: 40973207
Number of successful extensions: 112651
Number of sequences better than 10.0: 40
Number of HSP's gapped: 112559
Number of HSP's successfully gapped: 57
Length of query: 587
Length of database: 1,040,966,779
Length adjustment: 134
Effective length of query: 453
Effective length of database: 611,592,589
Effective search space: 277051442817
Effective search space used: 277051442817
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.46  gvh: 0.38  alm: 0.45  top: 0.53  tms: 0.00  mit: 0.35  mip: 0.03
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: nuclear
	 28.0 %: cytoplasmic
	 20.0 %: mitochondrial
	  8.0 %: cytoskeletal
	  8.0 %: vesicles of secretory system

>> prediction for Contig-U11043-1 is nuc
VS (DIR, S) 0
VH (FL, L) 2
VF (FL, S) 0
AH (FL, L) 4
AF (FL, S) 1
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 6
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0