| Homology vs DNA |
 |
| Homology vs Protein |
Query= Contig-U01725-1 (Contig-U01725-1Q) /CSM_Contig/Contig-U01725-1Q.Seq.d
(537 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB384176_1(AB384176|pid:none) Synthetic construct DNA, clone: pF... 90 6e-21
(Q9P2M4) RecName: Full=TBC1 domain family member 14; 90 6e-21
AL833868_1(AL833868|pid:none) Homo sapiens mRNA; cDNA DKFZp434K1... 90 6e-21
AK295068_1(AK295068|pid:none) Homo sapiens cDNA FLJ55205 complet... 90 6e-21
EF635009_1(EF635009|pid:none) Xenopus laevis spermatogenesis-rel... 89 1e-20
(Q8CGA2) RecName: Full=TBC1 domain family member 14; 88 3e-20
BC096446_1(BC096446|pid:none) Mus musculus TBC1 domain family, m... 88 3e-20
BC042515_1(BC042515|pid:none) Mus musculus TBC1 domain family, m... 88 3e-20
AB093293_1(AB093293|pid:none) Mus musculus mRNA for mKIAA1322 pr... 88 3e-20
AB064521_1(AB064521|pid:none) Mus musculus mRNA for KIAA1322, co... 88 3e-20
BC011420_1(BC011420|pid:none) Mus musculus TBC1 domain family, m... 88 3e-20
BC099760_1(BC099760|pid:none) Rattus norvegicus TBC1 domain fami... 87 6e-20
AB108668_1(AB108668|pid:none) Rattus norvegicus UR-NR#2 mRNA for... 87 6e-20
AK172979_1(AK172979|pid:none) Mus musculus mRNA for mKIAA0608 pr... 88 1e-19
AL049956_1(AL049956|pid:none) Homo sapiens mRNA; cDNA DKFZp564J2... 88 1e-19
BC160725_1(BC160725|pid:none) Xenopus laevis hypothetical protei... 85 4e-19
T16712(T16712)hypothetical protein R11B5.1 - Caenorhabditis eleg... 94 2e-18
BC033574_1(BC033574|pid:none) Mus musculus TBC1D12: TBC1 domain ... 88 2e-16
AB117752_1(AB117752|pid:none) Rattus norvegicus SRF-2 mRNA for h... 72 1e-15
FN357586_12(FN357586|pid:none) Schistosoma mansoni genome sequen... 67 9e-14
FN313631_1(FN313631|pid:none) Schistosoma japonicum isolate Anhu... 62 8e-12
AC115584_16(AC115584|pid:none) Dictyostelium discoideum chromoso... 61 2e-08
(Q5F361) RecName: Full=TBC domain-containing protein kinase-like... 60 4e-08
BC096904_1(BC096904|pid:none) Danio rerio similar to CG4041-PA, ... 60 5e-08
(Q8TEA7) RecName: Full=TBC domain-containing protein kinase-like... 60 5e-08
BC068496_1(BC068496|pid:none) Homo sapiens TBC domain-containing... 60 5e-08
DQ893279_1(DQ893279|pid:none) Synthetic construct clone IMAGE:10... 60 5e-08
BC020853_1(BC020853|pid:none) Homo sapiens TBC domain-containing... 60 5e-08
BX537118_1(BX537118|pid:none) Zebrafish DNA sequence from clone ... 60 5e-08
(Q8BM85) RecName: Full=TBC domain-containing protein kinase-like... 59 6e-08
AK041928_1(AK041928|pid:none) Mus musculus 3 days neonate thymus... 59 8e-08
CR533426_1(CR533426|pid:none) Paramecium tetraurelia, complete g... 58 1e-07
AC013483_23(AC013483|pid:none) Arabidopsis thaliana chromosome I... 58 1e-07
AK228869_1(AK228869|pid:none) Arabidopsis thaliana mRNA for puta... 58 1e-07
AY084232_1(AY084232|pid:none) Arabidopsis thaliana clone 100460 ... 58 1e-07
CR533427_1(CR533427|pid:none) Paramecium tetraurelia, complete g... 58 1e-07
G88391(G88391)protein R06B10.5 [imported] - Caenorhabditis elegans 58 2e-07
FN357531_9(FN357531|pid:none) Schistosoma mansoni genome sequenc... 55 9e-07
BC078044_1(BC078044|pid:none) Xenopus laevis MGC82809 protein, m... 55 1e-06
FN357302_20(FN357302|pid:none) Schistosoma mansoni genome sequen... 55 1e-06
AY812490_1(AY812490|pid:none) Schistosoma japonicum SJCHGC05536 ... 55 1e-06
EF086695_1(EF086695|pid:none) Picea sitchensis clone WS02732_I13... 54 2e-06
AY136478_1(AY136478|pid:none) Arabidopsis thaliana plant adhesio... 54 3e-06
BT038351_1(BT038351|pid:none) Zea mays full-length cDNA clone ZM... 53 6e-06
(A6H8I2) RecName: Full=Small G protein signaling modulator 3 hom... 53 6e-06
BC167673_1(BC167673|pid:none) Xenopus tropicalis hypothetical pr... 53 6e-06
DQ415922_30(DQ415922|pid:none) Cleome spinosa clone BAC Cs1, com... 53 6e-06
BT084174_1(BT084174|pid:none) Zea mays full-length cDNA clone ZM... 53 6e-06
EF146951_1(EF146951|pid:none) Populus trichocarpa clone WS01225_... 53 6e-06
(Q6P6R7) RecName: Full=Small G protein signaling modulator 3; Al... 52 7e-06
AM502254_659(AM502254|pid:none) Leishmania infantum chromosome 36. 52 7e-06
FN357332_9(FN357332|pid:none) Schistosoma mansoni genome sequenc... 52 7e-06
(Q8VCZ6) RecName: Full=Small G protein signaling modulator 3; Al... 52 7e-06
BC160813_1(BC160813|pid:none) Rattus norvegicus TBC1 domain fami... 52 1e-05
AC121361_5(AC121361|pid:none) Oryza sativa (japonica cultivar-gr... 52 1e-05
BT052665_1(BT052665|pid:none) Medicago truncatula clone MTYFD_FE... 52 1e-05
BC122032_1(BC122032|pid:none) Xenopus tropicalis hypothetical pr... 51 2e-05
BC084964_1(BC084964|pid:none) Xenopus laevis hypothetical LOC495... 51 2e-05
BC168786_1(BC168786|pid:none) Xenopus tropicalis hypothetical pr... 51 2e-05
BC129516_1(BC129516|pid:none) Xenopus laevis hypothetical protei... 51 2e-05
(Q60949) RecName: Full=TBC1 domain family member 1; 51 2e-05
AK168763_1(AK168763|pid:none) Mus musculus 16 days embryo kidney... 51 2e-05
BT031268_1(BT031268|pid:none) Drosophila melanogaster LD42868 fu... 51 2e-05
AK131177_1(AK131177|pid:none) Mus musculus mRNA for mFLJ00332 pr... 51 2e-05
CP000587_123(CP000587|pid:none) Ostreococcus lucimarinus CCE9901... 51 2e-05
AE014298_714(AE014298|pid:none) Drosophila melanogaster chromoso... 51 2e-05
AK164923_1(AK164923|pid:none) Mus musculus 0 day neonate lung cD... 51 2e-05
(O97790) RecName: Full=TBC1 domain family member 1; AltName: Ful... 51 2e-05
FN357341_71(FN357341|pid:none) Schistosoma mansoni genome sequen... 50 4e-05
FN357585_5(FN357585|pid:none) Schistosoma mansoni genome sequenc... 50 4e-05
AK220347_1(AK220347|pid:none) Mus musculus mRNA for mKIAA0603 pr... 50 4e-05
AK172575_1(AK172575|pid:none) Mus musculus activated spleen cDNA... 50 4e-05
BX649327_13(BX649327|pid:none) Zebrafish DNA sequence from clone... 50 4e-05
AP008207_2992(AP008207|pid:none) Oryza sativa (japonica cultivar... 50 5e-05
AP003271_10(AP003271|pid:none) Oryza sativa Japonica Group genom... 50 5e-05
AB029031_1(AB029031|pid:none) Homo sapiens mRNA for KIAA1108 pro... 49 6e-05
(Q5RAN1) RecName: Full=Rab GTPase-activating protein 1; AltName:... 49 6e-05
(Q09830) RecName: Full=TBC domain-containing protein C4G8.04; &... 49 6e-05
AK051644_1(AK051644|pid:none) Mus musculus 12 days embryo spinal... 49 6e-05
T13163(T13163;T08800)Rab6 GTPase activating protein, GAPCenA - h... 49 6e-05
(Q9Y3P9) RecName: Full=Rab GTPase-activating protein 1; AltName:... 49 6e-05
AK027355_1(AK027355|pid:none) Homo sapiens cDNA FLJ14449 fis, cl... 49 6e-05
AK220489_1(AK220489|pid:none) Mus musculus mRNA for mKIAA4104 pr... 49 6e-05
BC126979_1(BC126979|pid:none) Homo sapiens TBC1 (tre-2/USP6, BUB... 49 6e-05
AY893161_1(AY893161|pid:none) Synthetic construct Homo sapiens c... 49 6e-05
BC014529_1(BC014529|pid:none) Homo sapiens TBC1 (tre-2/USP6, BUB... 49 6e-05
BC053648_1(BC053648|pid:none) Homo sapiens TBC1 (tre-2/USP6, BUB... 49 6e-05
AJ011679_1(AJ011679|pid:none) Homo sapiens mRNA for Rab6 GTPase ... 49 6e-05
U67954_1(U67954|pid:none) Caenorhabditis elegans cosmid F41D9, c... 49 8e-05
AK228688_1(AK228688|pid:none) Arabidopsis thaliana mRNA for puta... 49 8e-05
CR954207_111(CR954207|pid:none) Ostreococcus tauri strain OTTH05... 49 8e-05
BX284749_3(BX284749|pid:none) Neurospora crassa DNA linkage grou... 49 8e-05
BT029977_1(BT029977|pid:none) Drosophila melanogaster IP18248 fu... 49 1e-04
AF161420_1(AF161420|pid:none) Homo sapiens HSPC302 mRNA, partial... 49 1e-04
BT029973_1(BT029973|pid:none) Drosophila melanogaster IP18148 fu... 49 1e-04
(Q9BXI6) RecName: Full=TBC1 domain family member 10A; AltName: F... 49 1e-04
AK093231_1(AK093231|pid:none) Homo sapiens cDNA FLJ35912 fis, cl... 49 1e-04
(Q8IV04) RecName: Full=Carabin; AltName: Full=TBC1 domain family... 49 1e-04
BC073710_1(BC073710|pid:none) Xenopus laevis MGC83651 protein, m... 49 1e-04
BC150187_1(BC150187|pid:none) Homo sapiens TBC1 domain family, m... 49 1e-04
AE014296_1508(AE014296|pid:none) Drosophila melanogaster chromos... 49 1e-04
BC143051_1(BC143051|pid:none) Synthetic construct Homo sapiens c... 49 1e-04
AB449895_1(AB449895|pid:none) Homo sapiens TBC1D10B mRNA for TBC... 48 1e-04
BC050523_1(BC050523|pid:none) Homo sapiens TBC1 domain family, m... 48 1e-04
CR858652_1(CR858652|pid:none) Pongo abelii mRNA; cDNA DKFZp459D0... 48 1e-04
AB019489_1(AB019489|pid:none) Homo sapiens IDN4-GGTR6 mRNA, part... 48 1e-04
BC063112_1(BC063112|pid:none) Homo sapiens TBC1 domain family, m... 48 1e-04
(P53258) RecName: Full=GTPase-activating protein GYP2; AltName: ... 48 1e-04
AB019491_1(AB019491|pid:none) Homo sapiens IDN4-GGTR8 mRNA, part... 48 1e-04
BC098419_1(BC098419|pid:none) Homo sapiens TBC1 domain family, m... 48 1e-04
AF285112_1(AF285112|pid:none) Mus musculus unknown WZ3-85 mRNA, ... 48 1e-04
AY364260_1(AY364260|pid:none) Homo sapiens clone peg2130 HHL (HH... 48 1e-04
AE014297_332(AE014297|pid:none) Drosophila melanogaster chromoso... 48 2e-04
AK300468_1(AK300468|pid:none) Homo sapiens cDNA FLJ50736 complet... 48 2e-04
(O60343) RecName: Full=TBC1 domain family member 4; AltName: Ful... 48 2e-04
FM207107_1(FM207107|pid:none) Homo sapiens mRNA for TBC1 domain ... 48 2e-04
FM207106_1(FM207106|pid:none) Homo sapiens mRNA for TBC1 domain ... 48 2e-04
AK304091_1(AK304091|pid:none) Homo sapiens cDNA FLJ50361 complet... 48 2e-04
(P58802) RecName: Full=TBC1 domain family member 10A; AltName: F... 47 2e-04
BC029773_1(BC029773|pid:none) Mus musculus TBC1 domain family, m... 47 2e-04
AL807825_6(AL807825|pid:none) Mouse DNA sequence from clone RP23... 47 2e-04
CR382128_61(CR382128|pid:none) Yarrowia lipolytica strain CLIB12... 47 2e-04
T29104(T29104) Tbc1 protein - mouse &U33005_1(U33005|pid:none) 47 2e-04
AK140872_1(AK140872|pid:none) Mus musculus 16 days embryo head c... 47 2e-04
FN357394_1(FN357394|pid:none) Schistosoma mansoni genome sequenc... 47 2e-04
AK295469_1(AK295469|pid:none) Homo sapiens cDNA FLJ60264 complet... 47 3e-04
CR858503_1(CR858503|pid:none) Pongo abelii mRNA; cDNA DKFZp469M0... 47 3e-04
CQ834574_1(CQ834574|pid:none) Sequence 445 from Patent WO2004058... 47 3e-04
CR749622_1(CR749622|pid:none) Homo sapiens mRNA; cDNA DKFZp779C0... 47 3e-04
BC127850_1(BC127850|pid:none) Homo sapiens small G protein signa... 47 3e-04
CQ834434_1(CQ834434|pid:none) Sequence 305 from Patent WO2004058... 47 3e-04
AK000006_1(AK000006|pid:none) Homo sapiens mRNA for FLJ00006 pro... 47 3e-04
AK301042_1(AK301042|pid:none) Homo sapiens cDNA FLJ53213 complet... 47 3e-04
Z72501_1(Z72501|pid:none) Caenorhabditis elegans Cosmid C04C11, ... 47 4e-04
AC021640_9(AC021640|pid:none) Arabidopsis thaliana chromosome II... 47 4e-04
Z78539_9(Z78539|pid:none) Caenorhabditis elegans Cosmid C31E10, ... 47 4e-04
AC084405_31(AC084405|pid:none) Oryza sativa chromosome 3 BAC OSJ... 46 5e-04
(Q2KI13) RecName: Full=Small G protein signaling modulator 3; Al... 46 5e-04
BX323883_2(BX323883|pid:none) Zebrafish DNA sequence from clone ... 46 7e-04
BC110738_1(BC110738|pid:none) Xenopus laevis hypothetical protei... 45 9e-04
D86965_1(D86965|pid:none) Homo sapiens mRNA for KIAA0210 gene, p... 45 9e-04
BC043775_1(BC043775|pid:none) Xenopus laevis hypothetical protei... 45 9e-04
(Q92609) RecName: Full=TBC1 domain family member 5; &AB383800_1... 45 9e-04
BC056792_1(BC056792|pid:none) Danio rerio TBC1 domain family, me... 45 9e-04
BX927400_3(BX927400|pid:none) Zebrafish DNA sequence from clone ... 45 9e-04
AB168705_1(AB168705|pid:none) Macaca fascicularis testis cDNA cl... 45 0.001
AP007164_567(AP007164|pid:none) Aspergillus oryzae RIB40 genomic... 45 0.001
AE014297_1363(AE014297|pid:none) Drosophila melanogaster chromos... 45 0.001
FN357394_31(FN357394|pid:none) Schistosoma mansoni genome sequen... 45 0.001
CR382127_574(CR382127|pid:none) Yarrowia lipolytica strain CLIB1... 45 0.002
AE013599_1904(AE013599|pid:none) Drosophila melanogaster chromos... 45 0.002
(Q6GLZ0) RecName: Full=Growth hormone-regulated TBC protein 1; ... 45 0.002
AE017351_212(AE017351|pid:none) Cryptococcus neoformans var. neo... 45 0.002
AL844504_66(AL844504|pid:none) Plasmodium falciparum 3D7 chromos... 45 0.002
AM910991_113(AM910991|pid:none) Plasmodium knowlesi strain H chr... 45 0.002
CU928169_222(CU928169|pid:none) Kluyveromyces thermotolerans str... 45 0.002
BT021386_1(BT021386|pid:none) Drosophila melanogaster LD33902 fu... 45 0.002
AE013599_1902(AE013599|pid:none) Drosophila melanogaster chromos... 45 0.002
AK220251_1(AK220251|pid:none) Mus musculus mRNA for mKIAA0210 pr... 44 0.002
AE014297_2233(AE014297|pid:none) Drosophila melanogaster chromos... 44 0.002
AK154975_1(AK154975|pid:none) Mus musculus NOD-derived CD11c +ve... 44 0.002
(Q80XQ2) RecName: Full=TBC1 domain family member 5; &BC043113_1... 44 0.002
(Q10496) RecName: Full=TBC domain-containing protein C26F1.09; ... 44 0.002
AK144467_1(AK144467|pid:none) Mus musculus 0 day neonate cortex ... 44 0.002
AM494938_63(AM494938|pid:none) Leishmania braziliensis chromosom... 44 0.002
BC161710_1(BC161710|pid:none) Xenopus laevis hypothetical protei... 44 0.003
AK162371_1(AK162371|pid:none) Mus musculus adult male epididymis... 44 0.003
CU633899_494(CU633899|pid:none) Podospora anserina genomic DNA c... 44 0.003
(Q9Z1A9) RecName: Full=TBC1 domain family member 8; AltName: Ful... 44 0.003
BC005421_1(BC005421|pid:none) Mus musculus TBC1 domain family, m... 44 0.003
(Q28C33) RecName: Full=TBC1 domain family member 30; &CR942478_... 44 0.003
AK122585_1(AK122585|pid:none) Homo sapiens mRNA for FLJ00332 pro... 44 0.003
BC072280_1(BC072280|pid:none) Xenopus laevis hypothetical protei... 44 0.003
AM920437_715(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 44 0.003
AK141520_1(AK141520|pid:none) Mus musculus adult male hippocampu... 43 0.004
FM992691_493(FM992691|pid:none) Candida dubliniensis CD36 chromo... 43 0.004
CP000501_257(CP000501|pid:none) Pichia stipitis CBS 6054 chromos... 43 0.004
BX538351_33(BX538351|pid:none) Cryptosporidium parvum chromosome... 43 0.004
AL022238_11(AL022238|pid:none) Human DNA sequence from clone RP5... 43 0.006
CR860322_1(CR860322|pid:none) Pongo abelii mRNA; cDNA DKFZp459G0... 43 0.006
AE017351_95(AE017351|pid:none) Cryptococcus neoformans var. neof... 43 0.006
(Q28CB1) RecName: Full=TBC1 domain family member 2B; &BC121891_... 43 0.006
AM270079_49(AM270079|pid:none) Aspergillus niger contig An04c018... 43 0.006
(Q9Y2I9) RecName: Full=TBC1 domain family member 30; 43 0.006
Z68117_4(Z68117|pid:none) Caenorhabditis elegans Cosmid F45E6, c... 43 0.006
AB017114_1(AB017114|pid:none) Homo sapiens mRNA for AD 3, partia... 42 0.008
(O95759) RecName: Full=TBC1 domain family member 8; AltName: Ful... 42 0.008
FN392319_1506(FN392319|pid:none) Pichia pastoris GS115 chromosom... 42 0.008
AK292826_1(AK292826|pid:none) Homo sapiens cDNA FLJ76128 complet... 42 0.008
AB024057_1(AB024057|pid:none) Homo sapiens mRNA for vascular Rab... 42 0.008
FN392321_820(FN392321|pid:none) Pichia pastoris GS115 chromosome... 42 0.008
AB449889_1(AB449889|pid:none) Homo sapiens TBC1D8A mRNA for TBC1... 42 0.008
AL136221_9(AL136221|pid:none) Human DNA sequence from clone RP11... 42 0.010
AM494972_640(AM494972|pid:none) Leishmania braziliensis chromoso... 42 0.010
AK026127_1(AK026127|pid:none) Homo sapiens cDNA: FLJ22474 fis, c... 42 0.010
BC080640_1(BC080640|pid:none) Homo sapiens growth hormone regula... 42 0.010
CP001142_382(CP001142|pid:none) Phaeodactylum tricornutum CCAP 1... 42 0.010
DQ897500_1(DQ897500|pid:none) Caenorhabditis remanei strain CR10... 42 0.010
AB019492_1(AB019492|pid:none) Homo sapiens IDN4-GGTR14 mRNA, par... 42 0.010
AB449887_1(AB449887|pid:none) Homo sapiens TBC1D6 mRNA for TBC1 ... 42 0.010
T29570(T29570)hypothetical protein T24D11.1 - Caenorhabditis ele... 42 0.010
BC112123_1(BC112123|pid:none) Homo sapiens growth hormone regula... 42 0.010
U49940_1(U49940|pid:none) Caenorhabditis elegans cosmid T24D11, ... 42 0.010
BX538352_105(BX538352|pid:none) Cryptosporidium parvum chromosom... 41 0.010
AB019233_2(AB019233|pid:none) Arabidopsis thaliana genomic DNA, ... 42 0.013
EU975359_1(EU975359|pid:none) Zea mays clone 488613 TBC1 domain ... 42 0.013
AM502219_62(AM502219|pid:none) Leishmania infantum chromosome 1. 42 0.013
AL021483_9(AL021483|pid:none) Caenorhabditis elegans YAC Y38H8A,... 42 0.013
(Q6GL87) RecName: Full=Growth hormone-regulated TBC protein 1; ... 42 0.013
BC168982_1(BC168982|pid:none) Rattus norvegicus TBC1 domain fami... 42 0.013
AK044521_1(AK044521|pid:none) Mus musculus adult retina cDNA, RI... 42 0.013
(Q69ZT9) RecName: Full=TBC1 domain family member 30; &BC138285_... 42 0.013
AL021483_10(AL021483|pid:none) Caenorhabditis elegans YAC Y38H8A... 42 0.013
AE014297_1160(AE014297|pid:none) Drosophila melanogaster chromos... 42 0.013
AL683884_10(AL683884|pid:none) Mouse DNA sequence from clone RP2... 42 0.013
AX119059_1(AX119059|pid:none) Sequence 223 from Patent WO0129221. 42 0.013
AL021483_8(AL021483|pid:none) Caenorhabditis elegans YAC Y38H8A,... 42 0.013
AM270022_39(AM270022|pid:none) Aspergillus niger contig An02c027... 42 0.013
AL110485_2(AL110485|pid:none) Caenorhabditis elegans YAC Y46G5A,... 42 0.013
AL110485_3(AL110485|pid:none) Caenorhabditis elegans YAC Y46G5A,... 42 0.013
(Q6PBU5) RecName: Full=Growth hormone-regulated TBC protein 1-A;... 41 0.017
G89453(G89453)protein F35H12.2 [imported] - Caenorhabditis elegans 41 0.017
AC002340_10(AC002340|pid:none) Arabidopsis thaliana chromosome 2... 41 0.017
U41540_6(U41540|pid:none) Caenorhabditis elegans cosmid F35H12, ... 41 0.017
G84711(G84711)hypothetical protein At2g30710 [imported] - Arabid... 41 0.017
CP001325_308(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 41 0.017
BC071978_1(BC071978|pid:none) Homo sapiens TBC1 domain family, m... 41 0.022
AJ719378_1(AJ719378|pid:none) Gallus gallus partial mRNA for hyp... 41 0.022
AK124772_1(AK124772|pid:none) Homo sapiens cDNA FLJ42782 fis, cl... 41 0.022
AF318370_1(AF318370|pid:none) Homo sapiens pp8997 mRNA, complete... 41 0.022
AB449882_1(AB449882|pid:none) Homo sapiens TBC1D2A mRNA for TBC1... 41 0.022
BC151547_1(BC151547|pid:none) Bos taurus TBC1 domain family, mem... 41 0.022
AP007155_1002(AP007155|pid:none) Aspergillus oryzae RIB40 genomi... 41 0.022
AC151665_15(AC151665|pid:none) Medicago truncatula clone mth2-7k... 41 0.022
AK066076_1(AK066076|pid:none) Oryza sativa Japonica Group cDNA c... 41 0.022
BC090773_1(BC090773|pid:none) Danio rerio ecotropic viral integr... 41 0.022
AK298575_1(AK298575|pid:none) Homo sapiens cDNA FLJ56222 complet... 41 0.022
BC154215_1(BC154215|pid:none) Danio rerio growth hormone regulat... 40 0.029
CR760585_1(CR760585|pid:none) Xenopus tropicalis finished cDNA, ... 40 0.029
BC153970_1(BC153970|pid:none) Danio rerio hypothetical LOC566318... 40 0.029
BC159371_1(BC159371|pid:none) Xenopus tropicalis Novel protein s... 40 0.029
(O60447) RecName: Full=Ecotropic viral integration site 5 protei... 40 0.029
AF042345_1(AF042345|pid:none) Homo sapiens truncated EVI5 (EVI5)... 40 0.029
AK164899_1(AK164899|pid:none) Mus musculus 0 day neonate lung cD... 40 0.038
AL133332_1(AL133332|pid:none) Human DNA sequence from clone RP5-... 40 0.038
BC166483_1(BC166483|pid:none) Rattus norvegicus TBC1 domain fami... 40 0.038
AK131086_1(AK131086|pid:none) Homo sapiens mRNA for FLJ00288 pro... 40 0.038
CT005272_628(CT005272|pid:none) Leishmania major strain Friedlin... 40 0.038
AK134294_1(AK134294|pid:none) Mus musculus 13 days embryo male t... 40 0.038
CR382132_522(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 40 0.038
BC048085_1(BC048085|pid:none) Mus musculus TBC1 domain family, m... 40 0.049
EF148761_1(EF148761|pid:none) Populus trichocarpa x Populus delt... 40 0.049
(Q8CCW2) RecName: Full=TBC1 domain family member 9B; &AL627187_... 40 0.049
AK035457_1(AK035457|pid:none) Mus musculus adult male urinary bl... 40 0.049
AK066945_1(AK066945|pid:none) Oryza sativa Japonica Group cDNA c... 40 0.049
BC142319_1(BC142319|pid:none) Bos taurus ecotropic viral integra... 40 0.049
AL627187_5(AL627187|pid:none) Mouse DNA sequence from clone RP23... 40 0.049
(O94711) RecName: Full=GTPase-activating protein gyp2; &AL03456... 40 0.049
DQ658271_1(DQ658271|pid:none) Emiliania huxleyi clone Plate1_A19... 40 0.049
(Q96CN4) RecName: Full=EVI5-like protein; AltName: Full=Ecotropi... 39 0.064
AE014187_697(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.064
AL356834_3(AL356834|pid:none) Neurospora crassa DNA linkage grou... 39 0.064
AL844508_72(AL844508|pid:none) Plasmodium falciparum 3D7 chromos... 39 0.064
CP001333_70(CP001333|pid:none) Micromonas sp. RCC299 chromosome ... 39 0.064
AP007161_702(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 39 0.064
FM992689_976(FM992689|pid:none) Candida dubliniensis CD36 chromo... 39 0.064
CR382138_142(CR382138|pid:none) Debaryomyces hansenii strain CBS... 39 0.064
AC003058_4(AC003058|pid:none) Arabidopsis thaliana chromosome 2 ... 39 0.064
AM920437_69(AM920437|pid:none) Penicillium chrysogenum Wisconsin... 39 0.064
CS300705_1(CS300705|pid:none) Sequence 213 from Patent EP1661986. 39 0.064
BC108420_1(BC108420|pid:none) Mus musculus TBC1 domain family, m... 39 0.084
AK007905_1(AK007905|pid:none) Mus musculus 10 day old male pancr... 39 0.084
AE017350_147(AE017350|pid:none) Cryptococcus neoformans var. neo... 39 0.084
(Q9D3N8) RecName: Full=Growth hormone-regulated TBC protein 1; A... 39 0.084
AK082863_1(AK082863|pid:none) Mus musculus ES cells cDNA, RIKEN ... 39 0.084
BC056467_1(BC056467|pid:none) Mus musculus TBC1 domain family, m... 39 0.084
BC167441_1(BC167441|pid:none) Danio rerio si:ch211-198d18.2, mRN... 39 0.084
CU633900_297(CU633900|pid:none) Podospora anserina genomic DNA c... 39 0.084
(Q12317) RecName: Full=GTPase-activating protein MSB4; AltName: ... 39 0.084
BC149744_1(BC149744|pid:none) Bos taurus TBC1 domain family, mem... 39 0.084
S51886(S59162;S51886) hypothetical protein HRX185I.1 - yeast (Sa... 39 0.084
AL935165_5(AL935165|pid:none) Zebrafish DNA sequence from clone ... 39 0.084
AK066731_1(AK066731|pid:none) Oryza sativa Japonica Group cDNA c... 39 0.084
CP000501_192(CP000501|pid:none) Pichia stipitis CBS 6054 chromos... 39 0.084
AY383707_1(AY383707|pid:none) Rattus norvegicus LRRGT00052 mRNA,... 39 0.084
CR382121_316(CR382121|pid:none) Kluyveromyces lactis strain NRRL... 39 0.11
AK123828_1(AK123828|pid:none) Homo sapiens cDNA FLJ41834 fis, cl... 39 0.11
AE014296_3726(AE014296|pid:none) Drosophila melanogaster chromos... 39 0.11
AK027457_1(AK027457|pid:none) Homo sapiens cDNA FLJ14551 fis, cl... 39 0.11
AB463304_1(AB463304|pid:none) Synthetic construct DNA, clone: pF... 39 0.11
AB028978_1(AB028978|pid:none) Homo sapiens mRNA for KIAA1055 pro... 39 0.11
BC143010_1(BC143010|pid:none) Synthetic construct Homo sapiens c... 39 0.11
BC033712_1(BC033712|pid:none) Homo sapiens TBC1 domain family, m... 39 0.11
(Q9UPU7) RecName: Full=TBC1 domain family member 2B; 39 0.11
AK002101_1(AK002101|pid:none) Homo sapiens cDNA FLJ11239 fis, cl... 39 0.11
AK295183_1(AK295183|pid:none) Homo sapiens cDNA FLJ54808 complet... 39 0.11
BC129288_1(BC129288|pid:none) Danio rerio ecotropic viral integr... 39 0.11
BC144482_1(BC144482|pid:none) Homo sapiens TBC1 domain family, m... 39 0.11
BC140766_1(BC140766|pid:none) Homo sapiens TBC1 domain family, m... 39 0.11
BC025889_1(BC025889|pid:none) Mus musculus TBC1 domain family, m... 39 0.11
BC136509_1(BC136509|pid:none) Homo sapiens TBC1 domain family, m... 39 0.11
(Q12344) RecName: Full=GTPase-activating protein GYP5; &S61015(... 38 0.14
AM494966_165(AM494966|pid:none) Leishmania braziliensis chromoso... 38 0.14
AM270178_4(AM270178|pid:none) Aspergillus niger contig An08c0230... 38 0.14
AK001605_1(AK001605|pid:none) Homo sapiens cDNA FLJ10743 fis, cl... 38 0.14
BC057027_1(BC057027|pid:none) Mus musculus TBC1 domain family, m... 38 0.19
AP007151_626(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 38 0.19
(Q6ZT07) RecName: Full=TBC1 domain family member 9; &AB385394_1... 38 0.19
(O43048) RecName: Full=TBC domain-containing protein C215.01; &... 38 0.19
AM910994_321(AM910994|pid:none) Plasmodium knowlesi strain H chr... 38 0.19
BT054291_1(BT054291|pid:none) Zea mays full-length cDNA clone ZM... 38 0.19
AK127020_1(AK127020|pid:none) Homo sapiens cDNA FLJ45076 fis, cl... 38 0.19
AK049049_1(AK049049|pid:none) Mus musculus 0 day neonate cerebel... 38 0.19
CU638743_621(CU638743|pid:none) Podospora anserina genomic DNA c... 38 0.19
AK134614_1(AK134614|pid:none) Mus musculus adult male medulla ob... 38 0.19
CR382137_477(CR382137|pid:none) Debaryomyces hansenii strain CBS... 37 0.24
CP001323_331(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 37 0.24
CU928181_330(CU928181|pid:none) Zygosaccharomyces rouxii strain ... 37 0.24
(Q66K14) RecName: Full=TBC1 domain family member 9B; &AB449893_... 37 0.32
(Q9NVG8) RecName: Full=TBC1 domain family member 13; &AL441992_... 37 0.32
AK033710_1(AK033710|pid:none) Mus musculus adult male cecum cDNA... 37 0.32
CR940347_825(CR940347|pid:none) Theileria annulata strain Ankara... 37 0.32
CR382128_461(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 37 0.32
CP001323_47(CP001323|pid:none) Micromonas sp. RCC299 chromosome ... 37 0.32
(Q92738) RecName: Full=USP6 N-terminal-like protein; AltName: Fu... 37 0.32
D13644_1(D13644|pid:none) Homo sapiens mRNA for KIAA0019 protein... 37 0.32
CR382128_915(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 37 0.32
AB014576_1(AB014576|pid:none) Homo sapiens mRNA for KIAA0676 pro... 37 0.32
AM270021_16(AM270021|pid:none) Aspergillus niger contig An02c026... 37 0.32
BC080659_1(BC080659|pid:none) Homo sapiens TBC1 domain family, m... 37 0.32
BC051184_1(BC051184|pid:none) Mus musculus USP6 N-terminal like,... 37 0.42
AM502254_660(AM502254|pid:none) Leishmania infantum chromosome 36. 37 0.42
BC155713_1(BC155713|pid:none) Xenopus tropicalis hypothetical pr... 37 0.42
AP008217_903(AP008217|pid:none) Oryza sativa (japonica cultivar-... 37 0.42
(Q80XC3) RecName: Full=USP6 N-terminal-like protein; &AL845275_... 37 0.42
AL845275_4(AL845275|pid:none) Mouse DNA sequence from clone RP23... 37 0.42
Z81074_9(Z81074|pid:none) Caenorhabditis elegans Cosmid F32B6, c... 36 0.54
(Q755I4) RecName: Full=GTPase-activating protein GYP5; &AE01681... 36 0.54
(Q04322) RecName: Full=TBC domain-containing protein YMR192W; &... 36 0.54
T21643(T21643) hypothetical protein F32B6.8 - Caenorhabditis ele... 36 0.54
AM270172_24(AM270172|pid:none) Aspergillus niger contig An08c017... 35 0.93
AK091248_1(AK091248|pid:none) Homo sapiens cDNA FLJ33929 fis, cl... 35 0.93
AP007157_441(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 35 0.93
BC151057_1(BC151057|pid:none) Mus musculus TBC1 domain family, m... 35 0.93
CR382136_684(CR382136|pid:none) Debaryomyces hansenii strain CBS... 35 0.93
FN357422_41(FN357422|pid:none) Schistosoma mansoni genome sequen... 35 0.93
(Q0IIM8) RecName: Full=TBC1 domain family member 8B; &AB449890_... 35 0.93
AE014297_3040(AE014297|pid:none) Drosophila melanogaster chromos... 35 0.93
AL391315_4(AL391315|pid:none) Human DNA sequence from clone RP11... 35 0.93
(P26448) RecName: Full=Mitotic check point protein BUB2; AltName... 35 0.93
(A3KGB4) RecName: Full=TBC1 domain family member 8B; &AL672243_... 35 0.93
AK083833_1(AK083833|pid:none) Mus musculus 12 days embryo spinal... 35 1.2
AK084693_1(AK084693|pid:none) Mus musculus 13 days embryo heart ... 35 1.2
CU638743_741(CU638743|pid:none) Podospora anserina genomic DNA c... 35 1.2
AK147647_1(AK147647|pid:none) Mus musculus adult male brain UNDE... 35 1.2
AP007159_552(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 35 1.2
AF126057_1(AF126057|pid:none) Arabidopsis thaliana microtubule-a... 35 1.2
AK086293_1(AK086293|pid:none) Mus musculus 15 days embryo head c... 35 1.2
AK161054_1(AK161054|pid:none) Mus musculus 0 day neonate skin cD... 35 1.2
AK045194_1(AK045194|pid:none) Mus musculus 9.5 days embryo parth... 35 1.2
(Q29RJ2) RecName: Full=TBC1 domain family member 24; &BC114148_... 35 1.6
AM910995_423(AM910995|pid:none) Plasmodium knowlesi strain H chr... 35 1.6
CP001083_3553(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 34 2.1
BC108645_1(BC108645|pid:none) Xenopus laevis hypothetical protei... 34 2.1
(Q09445) RecName: Full=Uncharacterized protein C04A2.1; &U23448... 34 2.7
CP001581_3642(CP001581|pid:none) Clostridium botulinum A2 str. K... 34 2.7
CP000728_3398(CP000728|pid:none) Clostridium botulinum F str. La... 34 2.7
CP000962_3417(CP000962|pid:none) Clostridium botulinum A3 str. L... 34 2.7
AM412317_3418(AM412317|pid:none) Clostridium botulinum A str. AT... 34 2.7
CP000939_3425(CP000939|pid:none) Clostridium botulinum B1 str. O... 34 2.7
AL807577_18(AL807577|pid:none) Aspergillus fumigatus BAC AFA12F2. 34 2.7
AB032997_1(AB032997|pid:none) Homo sapiens mRNA for KIAA1171 pro... 33 3.5
AK099868_1(AK099868|pid:none) Oryza sativa Japonica Group cDNA c... 33 3.5
(Q9SR00) RecName: Full=Pentatricopeptide repeat-containing prote... 33 3.5
AC130798_4(AC130798|pid:none) Medicago truncatula clone mth2-27f... 33 3.5
AK221573_1(AK221573|pid:none) Arabidopsis thaliana mRNA for hypo... 33 3.5
(Q9ULP9) RecName: Full=TBC1 domain family member 24; &BC127015_... 33 3.5
CR380959_156(CR380959|pid:none) Candida glabrata strain CBS138 c... 33 3.5
BC112389_1(BC112389|pid:none) Homo sapiens TBC1 domain family, m... 33 3.5
AC159413_32(AC159413|pid:none) Trypanosoma brucei chromosome 7 c... 33 4.6
AE017352_213(AE017352|pid:none) Cryptococcus neoformans var. neo... 33 4.6
BC155093_1(BC155093|pid:none) Danio rerio zgc:171891, mRNA (cDNA... 33 4.6
AK013092_1(AK013092|pid:none) Mus musculus 10, 11 days embryo wh... 33 4.6
CU468230_3278(CU468230|pid:none) Acinetobacter baumannii str. SD... 33 4.6
BC157165_1(BC157165|pid:none) Xenopus tropicalis hypothetical pr... 33 4.6
AE016817_531(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 33 4.6
BC125999_1(BC125999|pid:none) Xenopus laevis hypothetical protei... 33 6.0
CR940347_403(CR940347|pid:none) Theileria annulata strain Ankara... 33 6.0
CU928175_82(CU928175|pid:none) Zygosaccharomyces rouxii strain C... 33 6.0
AB016884_9(AB016884|pid:none) Arabidopsis thaliana genomic DNA, ... 33 6.0
AK230017_1(AK230017|pid:none) Arabidopsis thaliana mRNA for GTPa... 33 6.0
CP000521_3611(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 33 6.0
AM502248_321(AM502248|pid:none) Leishmania infantum chromosome 30. 33 6.0
AP008210_598(AP008210|pid:none) Oryza sativa (japonica cultivar-... 33 6.0
AL731623_9(AL731623|pid:none) Oryza sativa genomic DNA, chromoso... 33 6.0
AY456254_8(AY456254|pid:none) Uraeotyphlus cf. oxyurus MW-212 mi... 33 6.1
CR855616_1(CR855616|pid:none) Xenopus tropicalis finished cDNA, ... 32 7.8
BX649605_67(BX649605|pid:none) Aspergillus fumigatus BAC pilot p... 32 7.8
AL035528_12(AL035528|pid:none) Arabidopsis thaliana DNA chromoso... 32 7.8
CR940353_415(CR940353|pid:none) Theileria annulata strain Ankara... 32 7.8
>AB384176_1(AB384176|pid:none) Synthetic construct DNA, clone:
pF1KSDA1322, Homo sapiens TBC1D14 gene for TBC1 domain
family member 14, complete cds, without stop codon, in
Flexi system. &AB449900_1(AB449900|pid:none)
Length = 693
Score = 90.1 bits (222), Expect(2) = 6e-21
Identities = 42/92 (45%), Positives = 59/92 (64%)
Frame = +2
Query: 119 HLKELGIQPDIFMIDWVLTVFSKALPLDVASHVWDTIFLDGEVVIFQTALGILKMYSKDL 298
H K+ + PDI++IDW+ T++SK+LPLD+A +WD DGE +F+TALGILK++ L
Sbjct: 571 HFKKNNLTPDIYLIDWIFTLYSKSLPLDLACRIWDVFCRDGEEFLFRTALGILKLFEDIL 630
Query: 299 EFGDFDVCMTLLTHLPTDIDEDELFQHINSFQ 394
DF LT LP D+ +ELF I + Q
Sbjct: 631 TKMDFIHMAQFLTRLPEDLPAEELFASIATIQ 662
Score = 33.1 bits (74), Expect(2) = 6e-21
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 3 NFLNNPCYMTFYTMNLDQMAVYMNTMDQLMAQNLPKI 113
N LN PC M F+ ++ M Y + +NLPK+
Sbjct: 532 NLLNKPCQMAFFRVDHGLMLTYFAAFEVFFEENLPKL 568
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 751,720,262
Number of extensions: 14779759
Number of successful extensions: 45295
Number of sequences better than 10.0: 400
Number of HSP's gapped: 45275
Number of HSP's successfully gapped: 420
Length of query: 179
Length of database: 1,051,180,864
Length adjustment: 120
Effective length of query: 59
Effective length of database: 662,793,784
Effective search space: 39104833256
Effective search space used: 39104833256
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
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