Contig-U10996-1 |
Contig ID |
Contig-U10996-1 |
Contig update |
2002.12.18 |
Contig sequence |
|
Gap |
gap included |
Contig length |
3017 |
Chromosome number (1..6, M) |
2 |
Chromosome length |
8467578 |
Start point |
5488454 |
End point |
5485454 |
Strand (PLUS/MINUS) |
MINUS |
Number of clones |
41 |
Number of EST |
76 |
Link to clone list |
U10996 |
List of clone(s) |
est1=AHQ747F,-2,612 est2=VHB348F,1,605 est3=AHL270F,8,616 est4=AHB392F,9,620 est5=AHC409F,9,584 est6=AHK412F,9,582 est7=SHD665F,13,573 est8=SHF543F,13,613 est9=AHE763F,15,618 est10=AHA696F,16,620 est11=AHC623F,16,583 est12=AHF711F,16,615 est13=SHH735F,16,581 est14=AHQ336F,17,616 est15=AHB251F,18,579 est16=VHJ343F,18,614 est17=AHN893F,24,611 est18=SHJ505F,27,608 est19=AHF319F,29,669 est20=AHI606F,31,616 est21=AHB369F,34,620 est22=CHG289F,43,513 est23=AHJ673F,49,616 est24=AHL244F,49,668 est25=CHQ636F,49,667 est26=CHQ653F,49,664 est27=AHC758F,53,616 est28=AHD346F,56,720 est29=AHI795F,56,669 est30=CHR180F,56,617 est31=SHA287F,61,666 est32=AHQ433F,119,771 est33=SHK763F,210,799 est34=AHH746F,236,391 est35=AHA546F,521,1174 est36=AFJ753F,725,1346 est37=VHH217F,1257,1884 est38=AHL244Z,1885,2651 est39=CHI416Z,1965,2368 est40=AHL270Z,2041,2840 est41=CHG289Z,2047,2853 est42=CHQ653Z,2048,2835 est43=CHR180Z,2048,2835 est44=AHD346Z,2051,2840 est45=AHC623Z,2053,2840 est46=AHI795Z,2053,2789 est47=VHB348Z,2054,2853 est48=VHJ343Z,2056,2816 est49=SHA287Z,2061,2835 est50=AHF319Z,2062,2840 est51=AHF711Z,2062,2840 est52=AHE763Z,2064,2840 est53=AHB251Z,2105,2840 est54=AHA696Z,2108,2840 est55=AHC409Z,2109,2846 est56=AHH746Z,2109,2857 est57=SHJ505Z,2112,2852 est58=AHB369Z,2113,2840 est59=SHD665Z,2113,2853 est60=AHK412Z,2115,2840 est61=AHA546Z,2116,2841 est62=AHJ673Z,2117,2830 est63=AHN893Z,2117,2857 est64=SHD351Z,2118,2853 est65=AHQ433Z,2128,2840 est66=SHK866Z,2202,2968 est67=AHQ336Z,2203,2824 est68=AFJ753Z,2211,2839 est69=AHC758Z,2212,2840 est70=AHI606Z,2226,2927 est71=AHB392Z,2228,2840 est72=AHP192Z,2257,2840 est73=CHQ636Z,2328,2986 est74=SHF543Z,2464,3018 est75=AHQ747Z,2469,3041 est76=VHH217Z,2515,2960
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.10 |
Homology vs CSM-cDNA |
|
dna update |
2008.11.22 |
Homology vs DNA |
Query= Contig-U10996-1 (Contig-U10996-1Q) /CSM_Contig/Contig-U10996-1Q.Seq.d (3027 letters)
Database: ddbj_A 92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 3085 0.0 1 (BJ354445) Dictyostelium discoideum cDNA clone:dda53k18, 3' ... 1566 0.0 1 (BJ379396) Dictyostelium discoideum cDNA clone:ddc34a24, 3' ... 1554 0.0 2 (BJ437185) Dictyostelium discoideum cDNA clone:ddv33p11, 3' ... 1550 0.0 2 (BJ385631) Dictyostelium discoideum cDNA clone:ddc55i14, 3' ... 1540 0.0 1 (BJ351104) Dictyostelium discoideum cDNA clone:dda42f03, 3' ... 1534 0.0 1 (BJ350797) Dictyostelium discoideum cDNA clone:dda41f05, 3' ... 1534 0.0 1 (BJ350681) Dictyostelium discoideum cDNA clone:dda40n15, 3' ... 1522 0.0 1 (BJ403373) Dictyostelium discoideum cDNA clone:dds24m22, 3' ... 1509 0.0 1 (BJ354347) Dictyostelium discoideum cDNA clone:dda53g12, 3' ... 1489 0.0 1 (BJ442254) Dictyostelium discoideum cDNA clone:ddv49f11, 3' ... 1453 0.0 1 (BJ348535) Dictyostelium discoideum cDNA clone:dda33e14, 3' ... 1451 0.0 1 (BJ348350) Dictyostelium discoideum cDNA clone:dda32o24, 3' ... 1445 0.0 1 (BJ348985) Dictyostelium discoideum cDNA clone:dda35b04, 3' ... 1443 0.0 1 (BJ407610) Dictyostelium discoideum cDNA clone:dds43i01, 3' ... 1435 0.0 1 (BJ405379) Dictyostelium discoideum cDNA clone:dds31a18, 3' ... 1433 0.0 2 (BJ348167) Dictyostelium discoideum cDNA clone:dda32k11, 3' ... 1431 0.0 1 (BJ355988) Dictyostelium discoideum cDNA clone:dda58j24, 3' ... 1427 0.0 2 (BJ348562) Dictyostelium discoideum cDNA clone:dda33j17, 3' ... 1427 0.0 1 (BJ405083) Dictyostelium discoideum cDNA clone:dds30f13, 3' ... 1423 0.0 2 (BJ353683) Dictyostelium discoideum cDNA clone:dda51h04, 3' ... 1423 0.0 1 (BJ386033) Dictyostelium discoideum cDNA clone:ddc56o19, 3' ... 1376 0.0 2 (BJ352331) Dictyostelium discoideum cDNA clone:dda46l11, 3' ... 1376 0.0 3 (BJ349712) Dictyostelium discoideum cDNA clone:dda37l11, 3' ... 1376 0.0 3 (BJ357340) Dictyostelium discoideum cDNA clone:dda63b10, 3' ... 1344 0.0 2 (BJ353090) Dictyostelium discoideum cDNA clone:dda48n23, 3' ... 1330 0.0 3 (BJ408354) Dictyostelium discoideum cDNA clone:dds45d18, 3' ... 1324 0.0 2 (BJ353581) Dictyostelium discoideum cDNA clone:dda50a20, 3' ... 1318 0.0 3 (BJ330682) Dictyostelium discoideum cDNA clone:dda32k11, 5' ... 1294 0.0 1 (BJ422139) Dictyostelium discoideum cDNA clone:ddv45a06, 5' ... 1245 0.0 1 (BJ357369) Dictyostelium discoideum cDNA clone:dda63h09, 3' ... 1231 0.0 1 (BJ327486) Dictyostelium discoideum cDNA clone:dda20j13, 5' ... 1225 0.0 1 (BJ352849) Dictyostelium discoideum cDNA clone:dda48k02, 3' ... 1219 0.0 3 (BJ348635) Dictyostelium discoideum cDNA clone:dda33h23, 3' ... 1215 0.0 1 (BJ349449) Dictyostelium discoideum cDNA clone:dda36d15, 3' ... 1189 0.0 2 (BJ356906) Dictyostelium discoideum cDNA clone:dda61g23, 3' ... 1158 0.0 1 (BJ344823) Dictyostelium discoideum cDNA clone:dda20j13, 3' ... 1118 0.0 3 (BJ385547) Dictyostelium discoideum cDNA clone:ddc55g10, 3' ... 989 0.0 2 (BJ349335) Dictyostelium discoideum cDNA clone:dda36m06, 3' ... 892 0.0 2 (BJ338847) Dictyostelium discoideum cDNA clone:dda63b10, 5' ... 860 0.0 3 (BJ331882) Dictyostelium discoideum cDNA clone:dda37l11, 5' ... 765 0.0 2 (BJ335102) Dictyostelium discoideum cDNA clone:dda48n23, 5' ... 672 0.0 2 (BJ370767) Dictyostelium discoideum cDNA clone:ddc55g10, 5' ... 672 0.0 2 (BJ370833) Dictyostelium discoideum cDNA clone:ddc55i14, 5' ... 666 0.0 2 (BJ397265) Dictyostelium discoideum cDNA clone:dds45n15, 5' ... 934 0.0 2 (BJ332982) Dictyostelium discoideum cDNA clone:dda41f05, 5' ... 664 0.0 2 (BJ336274) Dictyostelium discoideum cDNA clone:dda53g12, 5' ... 662 0.0 2 (BJ391717) Dictyostelium discoideum cDNA clone:dds24m22, 5' ... 670 0.0 2 (BJ331025) Dictyostelium discoideum cDNA clone:dda33j17, 5' ... 575 0.0 2 (BJ330845) Dictyostelium discoideum cDNA clone:dda32o24, 5' ... 575 0.0 2 (BJ331087) Dictyostelium discoideum cDNA clone:dda33h23, 5' ... 575 0.0 2 (BJ371172) Dictyostelium discoideum cDNA clone:ddc56o19, 5' ... 573 0.0 2 (BJ332744) Dictyostelium discoideum cDNA clone:dda40n15, 5' ... 571 0.0 2 (BJ334877) Dictyostelium discoideum cDNA clone:dda48k02, 5' ... 567 0.0 2 (BJ423469) Dictyostelium discoideum cDNA clone:ddv49f11, 5' ... 567 0.0 2 (BJ338877) Dictyostelium discoideum cDNA clone:dda63h09, 5' ... 567 0.0 2 (BJ336366) Dictyostelium discoideum cDNA clone:dda53k18, 5' ... 567 0.0 2 (BJ394478) Dictyostelium discoideum cDNA clone:dds35e11, 5' ... 565 0.0 2 (BJ339184) Dictyostelium discoideum cDNA clone:dda64n11, 5' ... 559 0.0 2 (BJ339656) Dictyostelium discoideum cDNA clone:dda58j24, 5' ... 557 0.0 2 (BJ396558) Dictyostelium discoideum cDNA clone:dds43i01, 5' ... 555 0.0 2 (BJ331652) Dictyostelium discoideum cDNA clone:dda36d15, 5' ... 567 0.0 2 (BJ333265) Dictyostelium discoideum cDNA clone:dda42f03, 5' ... 557 0.0 2 (BJ418631) Dictyostelium discoideum cDNA clone:ddv33p11, 5' ... 549 0.0 2 (BJ335564) Dictyostelium discoideum cDNA clone:dda50a20, 5' ... 567 0.0 3 (BJ395556) Dictyostelium discoideum cDNA clone:dds39f09, 5' ... 502 0.0 2 (BJ331814) Dictyostelium discoideum cDNA clone:dda36m06, 5' ... 502 0.0 2 (BJ331356) Dictyostelium discoideum cDNA clone:dda35b04, 5' ... 504 0.0 2 (BJ331006) Dictyostelium discoideum cDNA clone:dda33e14, 5' ... 494 0.0 2 (BJ393487) Dictyostelium discoideum cDNA clone:dds31a18, 5' ... 486 0.0 2 (BJ335651) Dictyostelium discoideum cDNA clone:dda51h04, 5' ... 446 0.0 3 (BJ357706) Dictyostelium discoideum cDNA clone:dda64n11, 3' ... 718 0.0 2 (BJ406453) Dictyostelium discoideum cDNA clone:dds35e11, 3' ... 670 0.0 3 (BJ380456) Dictyostelium discoideum cDNA clone:ddc38p04, 3' ... 686 0.0 2 (BJ365269) Dictyostelium discoideum cDNA clone:ddc34a24, 5' ... 367 0.0 2 (BJ440872) Dictyostelium discoideum cDNA clone:ddv45a06, 3' ... 601 e-167 1 (BJ334441) Dictyostelium discoideum cDNA clone:dda46l11, 5' ... 123 1e-33 2 (CA302967) taa01d08.y1 Hydra cDNA library Hydra magnipapilla... 76 5e-23 5 (BY949890) Physcomitrella patens subsp. patens cDNA clone: P... 72 4e-22 5 (CS480546) Sequence 1 from Patent WO2006134496. 72 7e-21 5 (CS458932) Sequence 1 from Patent EP1734125. 72 7e-21 5 (CX054860) taj02h05.y2 Hydra EST UCI 5 ALP Hydra magnipapill... 76 5e-20 3 (BY949900) Physcomitrella patens subsp. patens cDNA clone: P... 72 2e-19 5 (BH165037) ENTTE68TR Entamoeba histolytica Sheared DNA Entam... 64 3e-18 6 (DQ117988) Physcomitrella patens DNA mismatch repair protein... 70 1e-17 6 (CS480548) Sequence 3 from Patent WO2006134496. 70 1e-17 6 (CS458934) Sequence 3 from Patent EP1734125. 70 1e-17 6 (BH136983) ENTNM86TF Entamoeba histolytica Sheared DNA Entam... 64 4e-17 6 (DR914248) EST1105787 Aquilegia cDNA library Aquilegia formo... 70 3e-16 3 (DT733860) EST1167710 Aquilegia cDNA library Aquilegia formo... 70 1e-14 3 (EE008107) ROE00013444 Rhizopus oryzae Company Rhizopus oryz... 46 3e-14 4 (CX574123) TTE00022649 Amplicon Express - Conjugative Form T... 52 1e-13 4 (CX580476) TTE00023385 Amplicon Express - Conjugative Form T... 52 2e-13 4 (CX580660) TTE00033470 Amplicon Express - Conjugative Form T... 52 2e-13 4 (EF058885) Synthetic construct Saccharomyces cerevisiae clon... 48 3e-13 5 (EA376886) Sequence 25709 from patent US 7314974. 48 3e-13 5 (Z74832) S.cerevisiae chromosome XV reading frame ORF YOL090w. 48 5e-13 5 (EF015608) Tetrahymena thermophila putative mismatch repair ... 52 6e-13 5 (M84170) S.cerevisiae homologue of bacterial MutS protein (M... 48 6e-13 6 (EA247811) Sequence 1 from patent US 7229755. 48 6e-13 6
>(AC116960) Dictyostelium discoideum chromosome 2 map complement(1004496-821614) strain AX4, complete sequence. Length = 182870
Score = 3085 bits (1556), Expect = 0.0 Identities = 1556/1556 (100%) Strand = Plus / Minus
Query: 329 ttgataatgatggttcattaacaacaactgcatcatcatcccaacaacaacaacaagaat 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12131 ttgataatgatggttcattaacaacaactgcatcatcatcccaacaacaacaacaagaat 12072
Query: 389 taggattagcggtattaacaattagacaaggttatgaatttgaaaatatagttaaagaat 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12071 taggattagcggtattaacaattagacaaggttatgaatttgaaaatatagttaaagaat 12012
Query: 449 tattagatgaaaagaaaaagattgaaatttggtcaatgaaaccaaatagtaaacaacaat 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12011 tattagatgaaaagaaaaagattgaaatttggtcaatgaaaccaaatagtaaacaacaat 11952
Query: 509 gggaactaattaaaaaaggctcaccaggtaatacacaaatgtttgaagatgttttattga 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11951 gggaactaattaaaaaaggctcaccaggtaatacacaaatgtttgaagatgttttattga 11892
Query: 569 atggtaattgtgaaggatcagttatgatggcattaaaagtcacaagagagaaaggttcaa 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11891 atggtaattgtgaaggatcagttatgatggcattaaaagtcacaagagagaaaggttcaa 11832
Query: 629 tcgtatttggtatatcatttggtgatgctactttcaagacaattggtgtttcacaattta 688 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11831 tcgtatttggtatatcatttggtgatgctactttcaagacaattggtgtttcacaattta 11772
Query: 689 tggataatgataatctatcgaatctttcaagttttataatgcaaatgagtgtaaaggaat 748 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11771 tggataatgataatctatcgaatctttcaagttttataatgcaaatgagtgtaaaggaat 11712
Query: 749 gcttgttatgttgtgatcaaaagaattatgattatcaaaaagttaaagagaaattatcag 808 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11711 gcttgttatgttgtgatcaaaagaattatgattatcaaaaagttaaagagaaattatcag 11652
Query: 809 atgcaggtataccattcacagaattaccaaaatcagatttctcctcaaagaatgccgaac 868 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11651 atgcaggtataccattcacagaattaccaaaatcagatttctcctcaaagaatgccgaac 11592
Query: 869 aagatttaactcgtttattgggttccgttaaaaataatttaccagatatcgaacaagagc 928 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11591 aagatttaactcgtttattgggttccgttaaaaataatttaccagatatcgaacaagagc 11532
Query: 929 atgccattcagtctgctagttgcttaattaaacatttggatttactttcaaatccaaatt 988 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11531 atgccattcagtctgctagttgcttaattaaacatttggatttactttcaaatccaaatt 11472
Query: 989 attttggtaaattcaaattggaaaaatatgatttagatagatatatgaaattagattctt 1048 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11471 attttggtaaattcaaattggaaaaatatgatttagatagatatatgaaattagattctt 11412
Query: 1049 catcatttaaaggtttacatattattgatttaaaagattcttcagttagtgcagcagcag 1108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11411 catcatttaaaggtttacatattattgatttaaaagattcttcagttagtgcagcagcag 11352
Query: 1109 gtggtggtggtgcaggtggagcatcatctagttcaaataaagatcaaagtttatataatt 1168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11351 gtggtggtggtgcaggtggagcatcatctagttcaaataaagatcaaagtttatataatt 11292
Query: 1169 tattaaatcaatgtaatacaccaatgggatcaagattattattacaatgggtaaagcaac 1228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11291 tattaaatcaatgtaatacaccaatgggatcaagattattattacaatgggtaaagcaac 11232
Query: 1229 cattattaaatgcagaggaaatcgaagcaagattaaattttgtagaggcattttataatg 1288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11231 cattattaaatgcagaggaaatcgaagcaagattaaattttgtagaggcattttataatg 11172
Query: 1289 atttggagttacgtcaatctttaagatcaaatgatttgaagaaaattggtgatttagata 1348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11171 atttggagttacgtcaatctttaagatcaaatgatttgaagaaaattggtgatttagata 11112
Query: 1349 gattatcaaagaaattgcatggtcaaaaggctacattggaggattgtgtcaatttgtatg 1408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11111 gattatcaaagaaattgcatggtcaaaaggctacattggaggattgtgtcaatttgtatg 11052
Query: 1409 gtattgtcactagattaccagtggtattgcaatcattgaataatcatagtagtatacatc 1468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11051 gtattgtcactagattaccagtggtattgcaatcattgaataatcatagtagtatacatc 10992
Query: 1469 aagagttgattaaagttaatttcatagagagtttagagtctattatatcagattttgcta 1528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10991 aagagttgattaaagttaatttcatagagagtttagagtctattatatcagattttgcta 10932
Query: 1529 aattctgtgcaatggttgaaaaaaccatcgatttagatttggccaatgacaaacatgaat 1588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10931 aattctgtgcaatggttgaaaaaaccatcgatttagatttggccaatgacaaacatgaat 10872
Query: 1589 atgttattagatcaagtttcgatgagacattacgtggtattcaattgaagaaagatcaaa 1648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10871 atgttattagatcaagtttcgatgagacattacgtggtattcaattgaagaaagatcaaa 10812
Query: 1649 tttcaaataaaatcgaacgatttagagttgacattgctgatgatttgaatttagatgaag 1708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10811 tttcaaataaaatcgaacgatttagagttgacattgctgatgatttgaatttagatgaag 10752
Query: 1709 caaaagttaaattacattatagtgaaaaggatatgtttttattgagaatctcaagaaagg 1768 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10751 caaaagttaaattacattatagtgaaaaggatatgtttttattgagaatctcaagaaagg 10692
Query: 1769 atgaggttgcaattagagataaaaagaaatacattgttcatgcaaccgctaaagatggtg 1828 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10691 atgaggttgcaattagagataaaaagaaatacattgttcatgcaaccgctaaagatggtg 10632
Query: 1829 taagatttgccactagagaaatcgatactctaaatgaagcctataagaaatggtca 1884 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10631 taagatttgccactagagaaatcgatactctaaatgaagcctataagaaatggtca 10576
Score = 1126 bits (568), Expect = 0.0 Identities = 568/568 (100%) Strand = Plus / Minus
Query: 2142 aggaccaaatatgggtggtaaatcaacatttattcgtcaagttggattaatagtattaat 2201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10186 aggaccaaatatgggtggtaaatcaacatttattcgtcaagttggattaatagtattaat 10127
Query: 2202 ggcacaaattggttgttttgtaccagcacaaaaagcaacaattgcagttgtcgattgtat 2261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10126 ggcacaaattggttgttttgtaccagcacaaaaagcaacaattgcagttgtcgattgtat 10067
Query: 2262 tttatcaagagttggtgcaggtgatagtcaattacgtggtgtttcaacatttatggcaga 2321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10066 tttatcaagagttggtgcaggtgatagtcaattacgtggtgtttcaacatttatggcaga 10007
Query: 2322 aatgttagagacatcttacattttaaaggttgcaactaaaaattctttaatcattattga 2381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10006 aatgttagagacatcttacattttaaaggttgcaactaaaaattctttaatcattattga 9947
Query: 2382 tgaacttggtagaggtacttcaacatatgatggttttggtttagcttggggtattgcaga 2441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9946 tgaacttggtagaggtacttcaacatatgatggttttggtttagcttggggtattgcaga 9887
Query: 2442 gtatatttgtaatcaaattggtggtttctgtctatttgcaactcatttccatgaattgac 2501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9886 gtatatttgtaatcaaattggtggtttctgtctatttgcaactcatttccatgaattgac 9827
Query: 2502 aattctatcagatttacttccaatggttaaaaatttacatgtttcagcttcaacccaaaa 2561 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9826 aattctatcagatttacttccaatggttaaaaatttacatgtttcagcttcaacccaaaa 9767
Query: 2562 caatacttttactttactctataaagttgaacaaggtccttgtgatcaaagttttggtat 2621 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9766 caatacttttactttactctataaagttgaacaaggtccttgtgatcaaagttttggtat 9707
Query: 2622 tcatgttgcaattttagcaaatttcccttcacaagttattgaaaatgcaaaacaaaaagc 2681 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9706 tcatgttgcaattttagcaaatttcccttcacaagttattgaaaatgcaaaacaaaaagc 9647
Query: 2682 aaaagaattggaatcttttgaatcaaat 2709 |||||||||||||||||||||||||||| Sbjct: 9646 aaaagaattggaatcttttgaatcaaat 9619
Score = 337 bits (170), Expect(7) = 0.0 Identities = 170/170 (100%) Strand = Plus / Minus
Query: 2710 acacttaaacaaaatcataataaatttttggaagaatttaaagaaattaatttcaattca 2769 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9432 acacttaaacaaaatcataataaatttttggaagaatttaaagaaattaatttcaattca 9373
Query: 2770 aatgatgtagaaaaatcattaagtttagttaatagtttattaaataaatattcaatagat 2829 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9372 aatgatgtagaaaaatcattaagtttagttaatagtttattaaataaatattcaatagat 9313
Query: 2830 atcaattaataaaatatgaaatttctactaaaaatatcccccttccccaa 2879 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9312 atcaattaataaaatatgaaatttctactaaaaatatcccccttccccaa 9263
Score = 274 bits (138), Expect(7) = 0.0 Identities = 138/138 (100%) Strand = Plus / Minus
Query: 74 cttcaataatgtcagataatgaacaagaagaatcatcacaagtagtattaaaggaggata 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12471 cttcaataatgtcagataatgaacaagaagaatcatcacaagtagtattaaaggaggata 12412
Query: 134 aaacctttgttacattttttcaaagtttagtatcctctaatgaagatacagacacaatta 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12411 aaacctttgttacattttttcaaagtttagtatcctctaatgaagatacagacacaatta 12352
Query: 194 gattatttgatagaaaag 211 |||||||||||||||||| Sbjct: 12351 gattatttgatagaaaag 12334
Score = 268 bits (135), Expect(7) = 0.0 Identities = 135/135 (100%) Strand = Plus / Minus
Query: 1895 tttgattgaagatttatcatcattaattgcaacattggatgtatttgtaactttaagtca 1954 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10507 tttgattgaagatttatcatcattaattgcaacattggatgtatttgtaactttaagtca 10448
Query: 1955 tgtatcttcaattgcaccaatcccattcattagaccagagattataccattaggtagtga 2014 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10447 tgtatcttcaattgcaccaatcccattcattagaccagagattataccattaggtagtga 10388
Query: 2015 tgaaaatggtgctgg 2029 ||||||||||||||| Sbjct: 10387 tgaaaatggtgctgg 10373
Score = 230 bits (116), Expect(7) = 0.0 Identities = 116/116 (100%) Strand = Plus / Minus
Query: 2029 ggcactgttattattggtggtcgtcatccatgtgtagaaattcaagataatgttaatttc 2088 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10374 ggcactgttattattggtggtcgtcatccatgtgtagaaattcaagataatgttaatttc 10315
Query: 2089 attgcaaatgatattgatttaactcgtggtcaatcccaatttcaaattataacagg 2144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10314 attgcaaatgatattgatttaactcgtggtcaatcccaatttcaaattataacagg 10259
Score = 188 bits (95), Expect(7) = 0.0 Identities = 95/95 (100%) Strand = Plus / Minus
Query: 2906 catatgaaatttaaaaatatctattttattgggtgaataataaagcatttcataattatt 2965 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9236 catatgaaatttaaaaatatctattttattgggtgaataataaagcatttcataattatt 9177
Query: 2966 aatagttttaatactatttataatgtattgttaag 3000 ||||||||||||||||||||||||||||||||||| Sbjct: 9176 aatagttttaatactatttataatgtattgttaag 9142
Score = 107 bits (54), Expect(7) = 0.0 Identities = 54/54 (100%) Strand = Plus / Minus
Query: 211 ggatattactcaattcatggtgaagatgcagtatttgtagcaatgatgcatttt 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12249 ggatattactcaattcatggtgaagatgcagtatttgtagcaatgatgcatttt 12196
Score = 28.2 bits (14), Expect(7) = 0.0 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 1338 tgatttagatagat 1351 |||||||||||||| Sbjct: 11443 tgatttagatagat 11430
Score = 48.1 bits (24), Expect = 2.0 Identities = 27/28 (96%) Strand = Plus / Minus
Query: 359 catcatcatcccaacaacaacaacaaga 386 |||||||||| ||||||||||||||||| Sbjct: 133531 catcatcatcacaacaacaacaacaaga 133504
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 92845959 Number of Hits to DB: 3,783,553,274 Number of extensions: 244060234 Number of successful extensions: 24569507 Number of sequences better than 10.0: 966 Length of query: 3027 Length of database: 95,242,211,685 Length adjustment: 25 Effective length of query: 3002 Effective length of database: 97,216,030,006 Effective search space: 291842522078012 Effective search space used: 291842522078012 X1: 11 (21.8 bits) S2: 23 (46.1 bits)
|
protein update |
2009. 6.28 |
Homology vs Protein |
Query= Contig-U10996-1 (Contig-U10996-1Q) /CSM_Contig/Contig-U10996-1Q.Seq.d (3027 letters)
Database: nrp_A 3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
AC116960_5(AC116960|pid:none) Dictyostelium discoideum chromosom... 1044 0.0 (Q5XXB5) RecName: Full=DNA mismatch repair protein Msh2; AltName... 622 e-176 BC161846_1(BC161846|pid:none) Rattus norvegicus mutS homolog 2 (... 621 e-176 CR861269_1(CR861269|pid:none) Pongo abelii mRNA; cDNA DKFZp459K0... 617 e-175 (P43246) RecName: Full=DNA mismatch repair protein Msh2; AltName... 617 e-175 U21011_1(U21011|pid:none) Mus musculus MutS homolog 2 (mMSH2) mR... 617 e-174 AK223284_1(AK223284|pid:none) Homo sapiens mRNA for mutS homolog... 616 e-174 AK222860_1(AK222860|pid:none) Homo sapiens mRNA for mutS homolog... 615 e-174 BC050897_1(BC050897|pid:none) Mus musculus mutS homolog 2 (E. co... 615 e-174 (P43247) RecName: Full=DNA mismatch repair protein Msh2; AltName... 615 e-174 S53609(S53609)DNA mismatch repair protein MSH2 - African clawed ... 609 e-172 (P54275) RecName: Full=DNA mismatch repair protein Msh2; AltName... 607 e-171 AM270365_12(AM270365|pid:none) Aspergillus niger contig An16c013... 312 e-170 AB104853_1(AB104853|pid:none) Gallus gallus cMSH2 mRNA for hypot... 601 e-170 DQ863303_1(DQ863303|pid:none) Penicillium marneffei MSH2-like pr... 305 e-169 AP007151_1075(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 310 e-169 BC044370_1(BC044370|pid:none) Danio rerio mutS homolog 2 (E. col... 595 e-168 BC165693_1(BC165693|pid:none) Danio rerio mutS homolog 2 (E. col... 593 e-167 AF412833_1(AF412833|pid:none) Danio rerio mismatch repair protei... 591 e-167 AE017341_740(AE017341|pid:none) Cryptococcus neoformans var. neo... 572 e-161 AK297763_1(AK297763|pid:none) Homo sapiens cDNA FLJ50998 complet... 567 e-160 CR380955_328(CR380955|pid:none) Candida glabrata strain CBS138 c... 300 e-152 AY650007_1(AY650007|pid:none) Petunia x hybrida DNA mismatch rep... 291 e-152 L47580_1(L47580|pid:none) Homo sapiens DNA mismatch repair prote... 524 e-147 CR382126_116(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 293 e-146 AB364512_1(AB364512|pid:none) Mesocricetus auratus MSH2 mRNA for... 515 e-144 AK296831_1(AK296831|pid:none) Homo sapiens cDNA FLJ57316 complet... 514 e-144 FN392319_1433(FN392319|pid:none) Pichia pastoris GS115 chromosom... 293 e-143 CP000581_81(CP000581|pid:none) Ostreococcus lucimarinus CCE9901 ... 274 e-140 AE016819_836(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 501 e-140 CU928174_258(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 493 e-137 CR954210_211(CR954210|pid:none) Ostreococcus tauri strain OTTH05... 278 e-137 AF109243_1(AF109243|pid:none) Arabidopsis thaliana mismatch repa... 484 e-134 AP008211_698(AP008211|pid:none) Oryza sativa (japonica cultivar-... 479 e-133 EU327761_1(EU327761|pid:none) Hartmannella vermiformis strain CD... 475 e-132 AB179432_1(AB179432|pid:none) Macaca fascicularis testis cDNA cl... 442 e-122 (P43248) RecName: Full=DNA mismatch repair protein spellchecker ... 424 e-116 CR382134_678(CR382134|pid:none) Debaryomyces hansenii strain CBS... 251 e-114 CP000501_375(CP000501|pid:none) Pichia stipitis CBS 6054 chromos... 395 e-108 FN357680_2(FN357680|pid:none) Schistosoma mansoni genome sequenc... 391 e-107 FM992691_629(FM992691|pid:none) Candida dubliniensis CD36 chromo... 385 e-105 AM502251_41(AM502251|pid:none) Leishmania infantum chromosome 33. 209 8e-96 AY026905_1(AY026905|pid:none) Trypanosoma brucei putative mismat... 215 4e-95 AM910995_231(AM910995|pid:none) Plasmodium knowlesi strain H chr... 352 6e-95 AM494970_40(AM494970|pid:none) Leishmania braziliensis chromosom... 206 2e-94 BT055046_1(BT055046|pid:none) Zea mays full-length cDNA clone ZM... 344 1e-92 CT005270_55(CT005270|pid:none) Leishmania major strain Friedlin,... 207 1e-92 AF106587_1(AF106587|pid:none) Caenorhabditis elegans fosmid H26D... 194 5e-92 AL844506_74(AL844506|pid:none) Plasmodium falciparum 3D7 chromos... 332 4e-89 L47579_1(L47579|pid:none) Homo sapiens DNA mismatch repair prote... 304 1e-80 DQ321769_1(DQ321769|pid:none) Trichomonas vaginalis strain NIH-C... 297 1e-78 AE014134_2579(AE014134|pid:none) Drosophila melanogaster chromos... 297 1e-78 AL031786_12(AL031786|pid:none) S.pombe chromosome II cosmid c24C6. 278 8e-73 (A4XL47) RecName: Full=DNA mismatch repair protein mutS; &CP000... 278 1e-72 (B1IM68) RecName: Full=DNA mismatch repair protein mutS; &CP000... 276 2e-72 (Q8RA71) RecName: Full=DNA mismatch repair protein mutS; &AE008... 275 5e-72 CP001393_1432(CP001393|pid:none) Anaerocellum thermophilum DSM 6... 275 5e-72 (A7GE45) RecName: Full=DNA mismatch repair protein mutS; &CP000... 272 5e-71 CP001581_1819(CP001581|pid:none) Clostridium botulinum A2 str. K... 272 5e-71 (B1KSA3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 271 8e-71 CP000924_1155(CP000924|pid:none) Thermoanaerobacter pseudethanol... 270 2e-70 (A0Q0M6) RecName: Full=DNA mismatch repair protein mutS; &CP000... 269 4e-70 AP008971_743(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 266 3e-69 (A7GR99) RecName: Full=DNA mismatch repair protein mutS; &CP000... 264 2e-68 (B7HLA3) RecName: Full=DNA mismatch repair protein mutS; &CP001... 261 8e-68 (A0RHE1) RecName: Full=DNA mismatch repair protein mutS; &CP000... 261 8e-68 (Q81WR3) RecName: Full=DNA mismatch repair protein mutS; &AE016... 261 8e-68 (Q6HF46) RecName: Full=DNA mismatch repair protein mutS; &AE017... 261 8e-68 (B7HDP4) RecName: Full=DNA mismatch repair protein mutS; &CP001... 261 1e-67 (Q636Q7) RecName: Full=DNA mismatch repair protein mutS; &CP000... 261 1e-67 AP009484_890(AP009484|pid:none) Macrococcus caseolyticus JCSC540... 260 2e-67 (B7ITM1) RecName: Full=DNA mismatch repair protein mutS; &CP001... 260 2e-67 CP000922_1502(CP000922|pid:none) Anoxybacillus flavithermus WK1,... 260 2e-67 (A8FST7) RecName: Full=DNA mismatch repair protein mutS; &CP000... 259 3e-67 (Q8TTB4) RecName: Full=DNA mismatch repair protein mutS; &AE010... 259 3e-67 AL009126_1761(AL009126|pid:none) Bacillus subtilis subsp. subtil... 259 5e-67 (A8H1T4) RecName: Full=DNA mismatch repair protein mutS; &CP000... 258 7e-67 (A8F164) RecName: Full=DNA mismatch repair protein mutS; &CP000... 257 2e-66 (B0TK13) RecName: Full=DNA mismatch repair protein mutS; &CP000... 257 2e-66 (Q4UM86) RecName: Full=DNA mismatch repair protein mutS; &CP000... 257 2e-66 (A8GMX2) RecName: Full=DNA mismatch repair protein mutS; &CP000... 256 3e-66 (Q086A1) RecName: Full=DNA mismatch repair protein mutS; &CP000... 256 3e-66 (A6WR19) RecName: Full=DNA mismatch repair protein mutS; &CP000... 256 3e-66 (A9VS13) RecName: Full=DNA mismatch repair protein mutS; &CP000... 256 3e-66 (A3QC86) RecName: Full=DNA mismatch repair protein mutS; &CP000... 256 5e-66 (Q46CE2) RecName: Full=DNA mismatch repair protein mutS; &CP000... 256 5e-66 CP001227_536(CP001227|pid:none) Rickettsia peacockii str. Rustic... 255 8e-66 (A6LLR1) RecName: Full=DNA mismatch repair protein mutS; &CP000... 254 1e-65 EU652258_1(EU652258|pid:none) Vibrio parahaemolyticus strain J-C... 254 2e-65 CP001252_1214(CP001252|pid:none) Shewanella baltica OS223, compl... 254 2e-65 EU652259_1(EU652259|pid:none) Vibrio parahaemolyticus strain J-C... 254 2e-65 (A3D786) RecName: Full=DNA mismatch repair protein mutS; &CP000... 254 2e-65 EU652253_1(EU652253|pid:none) Vibrio parahaemolyticus strain ATC... 254 2e-65 (A1S4E6) RecName: Full=DNA mismatch repair protein mutS; &CP000... 254 2e-65 (Q87LQ9) RecName: Full=DNA mismatch repair protein mutS; &BA000... 253 2e-65 FM954972_2463(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 253 4e-65 (A5CDU2) RecName: Full=DNA mismatch repair protein mutS; &AM494... 252 5e-65 (Q5M1Z0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 252 5e-65 (Q03MY4) RecName: Full=DNA mismatch repair protein mutS; &CP000... 252 6e-65 (Q8PWA7) RecName: Full=DNA mismatch repair protein mutS; &AE008... 251 8e-65 (A4W4J7) RecName: Full=DNA mismatch repair protein mutS; &CP000... 251 8e-65 (Q68X73) RecName: Full=DNA mismatch repair protein mutS; &AE017... 251 1e-64 (A8GX86) RecName: Full=DNA mismatch repair protein mutS; &CP000... 250 2e-64 AF091119_1(AF091119|pid:none) Lactococcus lactis DNA mismatch re... 249 4e-64 AP008981_431(AP008981|pid:none) Orientia tsutsugamushi str. Iked... 249 4e-64 (Q8EBR9) RecName: Full=DNA mismatch repair protein mutS; &AE014... 249 4e-64 (A1RHG2) RecName: Full=DNA mismatch repair protein mutS; &(A4Y9... 249 4e-64 L47577_1(L47577|pid:none) Homo sapiens DNA mismatch repair prote... 249 6e-64 CP001485_53(CP001485|pid:none) Vibrio cholerae MJ-1236 chromosom... 249 6e-64 (A0KU91) RecName: Full=DNA mismatch repair protein mutS; &CP000... 249 6e-64 (Q7MHR2) RecName: Full=DNA mismatch repair protein mutS; 248 7e-64 AM946015_1742(AM946015|pid:none) Streptococcus uberis 0140J comp... 248 7e-64 (A3CR17) RecName: Full=DNA mismatch repair protein mutS; &CP000... 248 7e-64 CP001098_1154(CP001098|pid:none) Halothermothrix orenii H 168, c... 248 7e-64 (Q9CDK9) RecName: Full=DNA mismatch repair protein mutS; &AE005... 248 7e-64 BA000037_2807(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, ch... 248 7e-64 (A8FDH3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 248 7e-64 CP000853_1527(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,... 248 9e-64 (A8EZG1) RecName: Full=DNA mismatch repair protein mutS; &CP000... 248 1e-63 CP001615_102(CP001615|pid:none) Exiguobacterium sp. AT1b, comple... 248 1e-63 (Q15QR9) RecName: Full=DNA mismatch repair protein mutS; &CP000... 247 2e-63 (Q0HL63) RecName: Full=DNA mismatch repair protein mutS; &CP000... 247 2e-63 (Q03VV4) RecName: Full=DNA mismatch repair protein mutS; &CP000... 247 2e-63 (Q1J489) RecName: Full=DNA mismatch repair protein mutS; &CP000... 247 2e-63 (A8GRI6) RecName: Full=DNA mismatch repair protein mutS; &CP000... 247 2e-63 (Q02VS3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 246 3e-63 (Q92IL9) RecName: Full=DNA mismatch repair protein mutS; &A9775... 246 5e-63 (A2RP10) RecName: Full=DNA mismatch repair protein mutS; &AM406... 245 6e-63 CP001612_324(CP001612|pid:none) Rickettsia africae ESF-5, comple... 245 6e-63 FM204883_2064(FM204883|pid:none) Streptococcus equi subsp. equi ... 245 8e-63 CP001129_1820(CP001129|pid:none) Streptococcus equi subsp. zooep... 245 8e-63 FM204884_1891(FM204884|pid:none) Streptococcus equi subsp. zooep... 245 8e-63 (B0UWV7) RecName: Full=DNA mismatch repair protein mutS; &CP000... 244 1e-62 (A4IMI0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 244 2e-62 (A0L7L5) RecName: Full=DNA mismatch repair protein mutS; &CP000... 243 2e-62 CP001091_1664(CP001091|pid:none) Actinobacillus pleuropneumoniae... 243 2e-62 (Q12PY3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 243 3e-62 (Q1JEH0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 243 4e-62 (Q2SBR5) RecName: Full=DNA mismatch repair protein mutS; 243 4e-62 CP000155_4989(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 243 4e-62 (Q1J9C1) RecName: Full=DNA mismatch repair protein mutS; &(Q1JJ... 242 5e-62 (Q8K5J5) RecName: Full=DNA mismatch repair protein mutS; &AE014... 242 5e-62 CU468135_2694(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 242 5e-62 (Q48QT6) RecName: Full=DNA mismatch repair protein mutS; &CP000... 242 5e-62 (Q99XL8) RecName: Full=DNA mismatch repair protein mutS; &AE004... 242 7e-62 CP001336_2691(CP001336|pid:none) Desulfitobacterium hafniense DC... 241 9e-62 DQ423216_1(DQ423216|pid:none) Haemophilus influenzae strain 11P6... 241 9e-62 (Q82ZA2) RecName: Full=DNA mismatch repair protein mutS; &AE016... 241 9e-62 (Q1WT15) RecName: Full=DNA mismatch repair protein mutS; &CP000... 241 1e-61 (A5UE20) RecName: Full=DNA mismatch repair protein mutS; &CP000... 241 1e-61 (P44834) RecName: Full=DNA mismatch repair protein mutS; &G6408... 241 1e-61 (B0BRS8) RecName: Full=DNA mismatch repair protein mutS; &CP000... 241 1e-61 (Q5E7G7) RecName: Full=DNA mismatch repair protein mutS; &CP000... 240 2e-61 (Q65QA9) RecName: Full=DNA mismatch repair protein mutS; &AE016... 240 2e-61 (Q5QUB6) RecName: Full=DNA mismatch repair protein mutS; 240 3e-61 (A8AZU4) RecName: Full=DNA mismatch repair protein mutS; &CP000... 240 3e-61 (Q5WFY3) RecName: Full=DNA mismatch repair protein mutS; &AP006... 240 3e-61 CP001102_713(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 240 3e-61 (Q89AD3) RecName: Full=DNA mismatch repair protein mutS; &AE016... 239 3e-61 CP000817_1607(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 239 4e-61 AJ783431_1(AJ783431|pid:none) Pseudomonas stutzeri mutS gene for... 239 4e-61 AY568596_1(AY568596|pid:none) Haemophilus influenzae isolate R46... 239 6e-61 (Q6D8C1) RecName: Full=DNA mismatch repair protein mutS; &BX950... 239 6e-61 (Q8RFK2) RecName: Full=DNA mismatch repair protein mutS; &AE009... 239 6e-61 (Q38YR4) RecName: Full=DNA mismatch repair protein mutS; &CR936... 238 1e-60 (Q2S254) RecName: Full=DNA mismatch repair protein mutS; &CP000... 238 1e-60 (Q82U08) RecName: Full=DNA mismatch repair protein mutS; &AL954... 238 1e-60 (A6VL76) RecName: Full=DNA mismatch repair protein mutS; &CP000... 238 1e-60 (Q03EQ7) RecName: Full=DNA mismatch repair protein mutS; &CP000... 238 1e-60 AM980469_1(AM980469|pid:none) Staphylococcus aureus subsp. aureu... 237 2e-60 (Q6AQ04) RecName: Full=DNA mismatch repair protein mutS; &CR522... 237 2e-60 (Q0TEC9) RecName: Full=DNA mismatch repair protein mutS; &CP000... 237 2e-60 (Q8FEL3) RecName: Full=DNA mismatch repair protein mutS; &AE014... 237 2e-60 CP000921_1883(CP000921|pid:none) Streptococcus pneumoniae Taiwan... 237 2e-60 CU928162_3109(CU928162|pid:none) Escherichia coli ED1a chromosom... 237 2e-60 (Q4QML2) RecName: Full=DNA mismatch repair protein mutS; &CP000... 237 2e-60 (B7LWH8) RecName: Full=DNA mismatch repair protein mutS; &(B7N6... 237 2e-60 AL021839_1(AL021839|pid:none) S.pombe chromosome II cosmid c19G7. 237 2e-60 CP001600_3128(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 236 3e-60 AE007317_1885(AE007317|pid:none) Streptococcus pneumoniae R6, co... 236 3e-60 (Q5FLX5) RecName: Full=DNA mismatch repair protein mutS; &CP000... 236 3e-60 CP000930_2497(CP000930|pid:none) Heliobacterium modesticaldum Ic... 236 3e-60 (P0A3R3) RecName: Full=DNA mismatch repair protein hexA; &(P0A3... 236 3e-60 AY568593_1(AY568593|pid:none) Haemophilus influenzae isolate C24... 236 3e-60 (Q4KHE3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 236 4e-60 (A4SIL2) RecName: Full=DNA mismatch repair protein mutS; &CP000... 235 6e-60 (Q88UZ7) RecName: Full=DNA mismatch repair protein mutS; &AL935... 235 8e-60 (B6I6B9) RecName: Full=DNA mismatch repair protein mutS; &AP009... 235 8e-60 (Q7VKA1) RecName: Full=DNA mismatch repair protein mutS; &AE017... 235 8e-60 CP001015_1945(CP001015|pid:none) Streptococcus pneumoniae G54, c... 235 8e-60 (A7ZQH3) RecName: Full=DNA mismatch repair protein mutS; 234 1e-59 U69873_1(U69873|pid:none) Escherichia coli DNA mismatch repair p... 234 1e-59 AE005174_3608(AE005174|pid:none) Escherichia coli O157:H7 EDL933... 234 1e-59 (B5Z397) RecName: Full=DNA mismatch repair protein mutS; &(B7LX... 234 1e-59 AF440200_1(AF440200|pid:none) Escherichia coli strain B MutS (mu... 234 1e-59 CP000970_2767(CP000970|pid:none) Escherichia coli SMS-3-5, compl... 234 1e-59 (A8A3L2) RecName: Full=DNA mismatch repair protein mutS; &(B1IU... 234 1e-59 DQ489736_1297(DQ489736|pid:none) Leuconostoc citreum KM20, compl... 234 1e-59 (Q8DWW1) RecName: Full=DNA mismatch repair protein mutS; &(Q8E2... 233 2e-59 (Q32CJ6) RecName: Full=DNA mismatch repair protein mutS; &CP000... 233 3e-59 AY150295_1(AY150295|pid:none) Enterococcus faecium strain E0013 ... 233 4e-59 (A7FLX1) RecName: Full=DNA mismatch repair protein mutS; &(Q66E... 232 5e-59 (Q1LTQ0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 232 5e-59 (A1JJU1) RecName: Full=DNA mismatch repair protein mutS; &AM286... 232 7e-59 (A4TQ04) RecName: Full=DNA mismatch repair protein mutS; &(Q1CL... 232 7e-59 CP001357_1111(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 232 7e-59 CP001321_1328(CP001321|pid:none) Haemophilus parasuis SH0165, co... 232 7e-59 (B1YMD7) RecName: Full=DNA mismatch repair protein mutS; &CP001... 231 1e-58 CP001277_1460(CP001277|pid:none) Candidatus Hamiltonella defensa... 231 1e-58 (Q3JYM3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 231 1e-58 AY150298_1(AY150298|pid:none) Enterococcus faecium strain C1 Mut... 231 1e-58 AJ783432_1(AJ783432|pid:none) Pseudomonas stutzeri mutS gene for... 231 2e-58 (B0KSD2) RecName: Full=DNA mismatch repair protein mutS; 229 3e-58 AM181176_1138(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 229 5e-58 (Q47WN0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 229 6e-58 CP001097_1643(CP001097|pid:none) Chlorobium limicola DSM 245, co... 229 6e-58 (A6W1Q6) RecName: Full=DNA mismatch repair protein mutS; &CP000... 229 6e-58 (A4G717) RecName: Full=DNA mismatch repair protein mutS; &CU207... 227 2e-57 CP001161_392(CP001161|pid:none) Buchnera aphidicola str. 5A (Acy... 227 2e-57 CP001158_390(CP001158|pid:none) Buchnera aphidicola str. Tuc7 (A... 227 2e-57 (P57504) RecName: Full=DNA mismatch repair protein mutS; &BA000... 227 2e-57 CP001071_338(CP001071|pid:none) Akkermansia muciniphila ATCC BAA... 227 2e-57 (B7GW85) RecName: Full=DNA mismatch repair protein mutS; &(B7IB... 226 4e-57 (A4VJN9) RecName: Full=DNA mismatch repair protein mutS; 226 5e-57 AY705787_1(AY705787|pid:none) Canis familiaris mutS-like protein... 210 6e-57 CP000969_1099(CP000969|pid:none) Thermotoga sp. RQ2, complete ge... 225 9e-57 CU466930_904(CU466930|pid:none) Candidatus Cloacamonas acidamino... 224 1e-56 (Q6LMU0) RecName: Full=DNA mismatch repair protein mutS; &CR378... 224 2e-56 (O83348) RecName: Full=DNA mismatch repair protein mutS; &AE000... 224 2e-56 (A5W816) RecName: Full=DNA mismatch repair protein mutS; &CP000... 223 3e-56 CP000951_174(CP000951|pid:none) Synechococcus sp. PCC 7002, comp... 223 3e-56 BA000022_1243(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 223 4e-56 (Q88ME7) RecName: Full=DNA mismatch repair protein mutS; &AE015... 223 4e-56 (Q3M892) RecName: Full=DNA mismatch repair protein mutS; &CP000... 222 6e-56 (Q9Z6W5) RecName: Full=DNA mismatch repair protein mutS; &AE002... 222 7e-56 CP000675_1894(CP000675|pid:none) Legionella pneumophila str. Cor... 221 9e-56 (B2KB17) RecName: Full=DNA mismatch repair protein mutS; &CP001... 221 1e-55 (A6V1G8) RecName: Full=DNA mismatch repair protein mutS; &CP000... 221 2e-55 AF400583_1(AF400583|pid:none) Acinetobacter sp. 93A2 mismatch re... 221 2e-55 (Q60BA1) RecName: Full=DNA mismatch repair protein mutS; &AE017... 220 2e-55 (A6TR79) RecName: Full=DNA mismatch repair protein mutS; &CP000... 220 2e-55 (Q5UZG9) RecName: Full=DNA mismatch repair protein mutS 1; 220 3e-55 (Q3IDC8) RecName: Full=DNA mismatch repair protein mutS; &CR954... 220 3e-55 AY596297_2248(AY596297|pid:none) Haloarcula marismortui ATCC 430... 220 3e-55 (Q9HY08) RecName: Full=DNA mismatch repair protein mutS; &AE004... 219 4e-55 CU694395_37(CU694395|pid:none) Ralstonia solanacearum strain Mol... 219 5e-55 (Q6FC54) RecName: Full=DNA mismatch repair protein mutS; &CR543... 219 5e-55 CU914168_1704(CU914168|pid:none) Ralstonia solanacearum strain I... 219 5e-55 AF400582_3(AF400582|pid:none) Acinetobacter sp. ADP1 mismatch re... 219 5e-55 CP000237_321(CP000237|pid:none) Neorickettsia sennetsu strain Mi... 219 5e-55 (Q5X4B2) RecName: Full=DNA mismatch repair protein mutS; &CR628... 219 6e-55 CP001154_372(CP001154|pid:none) Laribacter hongkongensis HLHK9, ... 218 8e-55 (Q3KH79) RecName: Full=DNA mismatch repair protein mutS; &CP000... 218 8e-55 AP010656_384(AP010656|pid:none) Candidatus Azobacteroides pseudo... 218 1e-54 CP001096_510(CP001096|pid:none) Rhodopseudomonas palustris TIE-1... 218 1e-54 AF220055_1(AF220055|pid:none) Pseudomonas aeruginosa mismatch re... 218 1e-54 (Q8Y093) RecName: Full=DNA mismatch repair protein mutS; &AL646... 218 1e-54 (Q30ZX3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 217 2e-54 CP001175_1147(CP001175|pid:none) Listeria monocytogenes HCC23, c... 217 2e-54 (A6WV86) RecName: Full=DNA mismatch repair protein mutS; &CP000... 217 2e-54 CP001068_974(CP001068|pid:none) Ralstonia pickettii 12J chromoso... 217 2e-54 AY268717_1(AY268717|pid:none) Salmonella enterica strain SARB71 ... 216 3e-54 AF383974_1(AF383974|pid:none) Salmonella enterica strain S2980 m... 216 4e-54 (A9MF43) RecName: Full=DNA mismatch repair protein mutS; &CP000... 216 4e-54 (A0B976) RecName: Full=DNA mismatch repair protein mutS; &CP000... 216 4e-54 (Q045Q5) RecName: Full=DNA mismatch repair protein mutS; &CP000... 216 5e-54 (Q0VNJ1) RecName: Full=DNA mismatch repair protein mutS; &AM286... 216 5e-54 (Q7V9M5) RecName: Full=DNA mismatch repair protein mutS; &AE017... 216 5e-54 (A0AIK5) RecName: Full=DNA mismatch repair protein mutS; &AM263... 215 7e-54 (B1JB25) RecName: Full=DNA mismatch repair protein mutS; &CP000... 215 7e-54 (Q0A8K3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 215 9e-54 AY268716_1(AY268716|pid:none) Salmonella enterica strain SARB17 ... 215 9e-54 (Q92BV3) RecName: Full=DNA mismatch repair protein mutS; &AG161... 215 9e-54 CP001229_6(CP001229|pid:none) Sulfurihydrogenibium azorense Az-F... 215 9e-54 CP001108_1551(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 215 9e-54 (A7NPT5) RecName: Full=DNA mismatch repair protein mutS; &CP000... 215 9e-54 (A5UZK7) RecName: Full=DNA mismatch repair protein mutS; &CP000... 215 9e-54 AM933172_2737(AM933172|pid:none) Salmonella enterica subsp. ente... 214 1e-53 CP001127_2849(CP001127|pid:none) Salmonella enterica subsp. ente... 214 1e-53 AY268715_1(AY268715|pid:none) Salmonella enterica strain SARB57 ... 214 1e-53 (Q8CXG6) RecName: Full=DNA mismatch repair protein mutS; &BA000... 214 1e-53 (B7J0P3) RecName: Full=DNA mismatch repair protein mutS; &(O517... 214 1e-53 FJ539011_1(FJ539011|pid:none) Salmonella enterica subsp. enteric... 214 1e-53 (Q5L0E5) RecName: Full=DNA mismatch repair protein mutS; &BA000... 214 1e-53 FM200053_2709(FM200053|pid:none) Salmonella enterica subsp. ente... 214 1e-53 CP000857_2849(CP000857|pid:none) Salmonella enterica subsp. ente... 214 1e-53 (Q5PEE6) RecName: Full=DNA mismatch repair protein mutS; &CP000... 214 1e-53 (A9N1F8) RecName: Full=DNA mismatch repair protein mutS; &(P0A1... 214 1e-53 (Q1QZX5) RecName: Full=DNA mismatch repair protein mutS; &CP000... 214 1e-53 CP001144_2921(CP001144|pid:none) Salmonella enterica subsp. ente... 214 1e-53 AY268734_1(AY268734|pid:none) Salmonella enterica strain SARB12 ... 214 1e-53 CP001113_2922(CP001113|pid:none) Salmonella enterica subsp. ente... 214 1e-53 (Q21LB1) RecName: Full=DNA mismatch repair protein mutS; &CP000... 214 2e-53 AY268735_1(AY268735|pid:none) Salmonella enterica strain SARB55 ... 214 2e-53 (A5N8I5) RecName: Full=DNA mismatch repair protein mutS; &AP009... 214 2e-53 (A1K764) RecName: Full=DNA mismatch repair protein mutS; 214 2e-53 AY268750_1(AY268750|pid:none) Salmonella enterica strain SARB61 ... 214 2e-53 (Q5WVP6) RecName: Full=DNA mismatch repair protein mutS; &CR628... 213 3e-53 (Q1IN52) RecName: Full=DNA mismatch repair protein mutS; &CP000... 213 3e-53 (Q07V29) RecName: Full=DNA mismatch repair protein mutS; &CP000... 213 3e-53 AY268700_1(AY268700|pid:none) Salmonella enterica strain SARB32 ... 213 3e-53 CP000521_1342(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 213 4e-53 (Q0AYB5) RecName: Full=DNA mismatch repair protein mutS; &CP000... 212 7e-53 AF383975_1(AF383975|pid:none) Salmonella enterica strain S2983 m... 211 1e-52 EU723250_1(EU723250|pid:none) Francisella philomiragia subsp. no... 211 1e-52 EU682972_1(EU682972|pid:none) Francisella philomiragia subsp. no... 211 1e-52 (B5XV49) RecName: Full=DNA mismatch repair protein mutS; &CP000... 211 1e-52 (Q2NVL9) RecName: Full=DNA mismatch repair protein mutS; &AP008... 211 1e-52 (A6TD24) RecName: Full=DNA mismatch repair protein mutS; &AP006... 211 1e-52 CP000386_287(CP000386|pid:none) Rubrobacter xylanophilus DSM 994... 211 1e-52 (Q8KCC0) RecName: Full=DNA mismatch repair protein mutS; &AE006... 211 2e-52 CP001339_1263(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, ... 211 2e-52 EU682969_1(EU682969|pid:none) Francisella philomiragia subsp. ph... 210 2e-52 (B8FJL5) RecName: Full=DNA mismatch repair protein mutS; &CP001... 210 2e-52 (Q01X96) RecName: Full=DNA mismatch repair protein mutS; &CP000... 210 2e-52 (A5FJ63) RecName: Full=DNA mismatch repair protein mutS; 210 3e-52 (A0Q809) RecName: Full=DNA mismatch repair protein mutS; &CP000... 210 3e-52 CP001275_1061(CP001275|pid:none) Thermomicrobium roseum DSM 5159... 210 3e-52 (Q8Y789) RecName: Full=DNA mismatch repair protein mutS; &AC125... 210 3e-52 FM872307_807(FM872307|pid:none) Chlamydia trachomatis B/TZ1A828/... 210 3e-52 EU682965_1(EU682965|pid:none) Francisella philomiragia subsp. ph... 209 4e-52 L47576_1(L47576|pid:none) Homo sapiens DNA mismatch repair prote... 209 4e-52 (Q3KKQ0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 209 4e-52 CP000934_2294(CP000934|pid:none) Cellvibrio japonicus Ueda107, c... 209 4e-52 (A9WFZ9) RecName: Full=DNA mismatch repair protein mutS; &CP000... 209 4e-52 EU682968_1(EU682968|pid:none) Francisella philomiragia subsp. ph... 209 4e-52 CU633749_1161(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 209 6e-52 (A5ILG0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 209 6e-52 AM884176_161(AM884176|pid:none) Chlamydia trachomatis strain L2/... 209 6e-52 CP000806_2150(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 209 6e-52 FM242711_1386(FM242711|pid:none) Listeria monocytogenes Clip8145... 208 1e-51 EU682970_1(EU682970|pid:none) Francisella noatunensis subsp. ori... 207 1e-51 EU682967_1(EU682967|pid:none) Francisella philomiragia subsp. ph... 207 1e-51 CP001230_748(CP001230|pid:none) Persephonella marina EX-H1, comp... 207 1e-51 (Q12VC9) RecName: Full=DNA mismatch repair protein mutS; &CP000... 207 1e-51 CP001107_1683(CP001107|pid:none) Eubacterium rectale ATCC 33656,... 207 2e-51 CP001348_1660(CP001348|pid:none) Clostridium cellulolyticum H10,... 207 2e-51 AM778956_116(AM778956|pid:none) Microcystis aeruginosa PCC 7806 ... 207 2e-51 (A6GWN3) RecName: Full=DNA mismatch repair protein mutS; &AM398... 207 2e-51 (Q2RJG2) RecName: Full=DNA mismatch repair protein mutS; &CP000... 206 3e-51 (A1VLZ6) RecName: Full=DNA mismatch repair protein mutS; &CP000... 206 3e-51 (Q0BNM7) RecName: Full=DNA mismatch repair protein mutS; &CP000... 206 4e-51 (A9GIM9) RecName: Full=DNA mismatch repair protein mutS; &AM746... 206 4e-51 (Q46IE5) RecName: Full=DNA mismatch repair protein mutS; &CP000... 206 5e-51 (Q5NYP9) RecName: Full=DNA mismatch repair protein mutS; &CR555... 206 5e-51 CP001078_1605(CP001078|pid:none) Clostridium botulinum E3 str. A... 206 5e-51 CP001056_1751(CP001056|pid:none) Clostridium botulinum B str. Ek... 205 7e-51 (A9KG24) RecName: Full=DNA mismatch repair protein mutS; 205 7e-51 (Q5HBQ7) RecName: Full=DNA mismatch repair protein mutS; &CR767... 205 9e-51 (Q5FHE8) RecName: Full=DNA mismatch repair protein mutS; &CR925... 204 1e-50 (Q3SJP0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 204 1e-50 CP001390_2732(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 204 2e-50 (A4SFT1) RecName: Full=DNA mismatch repair protein mutS; &CP000... 204 2e-50 (Q3A4F1) RecName: Full=DNA mismatch repair protein mutS; &CP000... 203 3e-50 (Q2N5V9) RecName: Full=DNA mismatch repair protein mutS; &CP000... 203 3e-50 AM982525_1(AM982525|pid:none) Pseudomonas avellanae partial mutS... 203 3e-50 (Q0KCC0) RecName: Full=DNA mismatch repair protein mutS; &AM260... 203 3e-50 AY814227_1(AY814227|pid:none) Schistosoma japonicum SJCHGC00949 ... 203 3e-50 (Q2KWZ4) RecName: Full=DNA mismatch repair protein mutS; &AM167... 203 3e-50 (Q48F92) RecName: Full=DNA mismatch repair protein mutS; &CP000... 202 5e-50 (P61666) RecName: Full=DNA mismatch repair protein mutS; &AE017... 202 5e-50 (P27345) RecName: Full=DNA mismatch repair protein mutS; &A5329... 202 5e-50 (A1VDD9) RecName: Full=DNA mismatch repair protein mutS; &CP000... 202 5e-50 (A9ILT1) RecName: Full=DNA mismatch repair protein mutS; &AM260... 202 6e-50 (Q83CQ2) RecName: Full=DNA mismatch repair protein mutS; 202 6e-50 CP001344_3540(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 202 6e-50 (A9NCN3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 202 6e-50 (Q7NRW7) RecName: Full=DNA mismatch repair protein mutS; &AE016... 202 8e-50 (Q5NL79) RecName: Full=DNA mismatch repair protein mutS; &AE008... 202 8e-50 (Q255T1) RecName: Full=DNA mismatch repair protein mutS; &AP006... 201 1e-49 (A5FQC0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 201 1e-49 (Q3Z767) RecName: Full=DNA mismatch repair protein mutS; &CP000... 201 1e-49 (Q7NLT8) RecName: Full=DNA mismatch repair protein mutS; &BA000... 201 1e-49 CP001100_93(CP001100|pid:none) Chloroherpeton thalassium ATCC 35... 201 2e-49 (A7HC64) RecName: Full=DNA mismatch repair protein mutS; &CP000... 201 2e-49 (A9KL10) RecName: Full=DNA mismatch repair protein mutS; &CP000... 201 2e-49 (Q1I659) RecName: Full=DNA mismatch repair protein mutS; &CT573... 200 2e-49 AP009153_3911(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 200 2e-49 AB039965_2(AB039965|pid:none) Pseudomonas putida icd, mutS, fdxA... 200 2e-49 CP000875_4058(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 200 3e-49 CP000941_1125(CP000941|pid:none) Xylella fastidiosa M12, complet... 200 3e-49 (Q8K9D2) RecName: Full=DNA mismatch repair protein mutS; &AE013... 200 3e-49 CP001001_605(CP001001|pid:none) Methylobacterium radiotolerans J... 200 3e-49 CP001196_121(CP001196|pid:none) Oligotropha carboxidovorans OM5 ... 199 4e-49 CP000248_3279(CP000248|pid:none) Novosphingobium aromaticivorans... 199 4e-49 (Q13ED0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 199 4e-49 (Q2KD76) RecName: Full=DNA mismatch repair protein mutS; &CP000... 199 5e-49 (Q9PCR2) RecName: Full=DNA mismatch repair protein mutS; 199 5e-49 (Q6MBV4) RecName: Full=DNA mismatch repair protein mutS; &BX908... 199 5e-49 (A7HMG4) RecName: Full=DNA mismatch repair protein mutS; &CP000... 199 5e-49 (Q8YES6) RecName: Full=DNA mismatch repair protein mutS; 199 7e-49 CP000356_2770(CP000356|pid:none) Sphingopyxis alaskensis RB2256,... 199 7e-49 CP000908_4222(CP000908|pid:none) Methylobacterium extorquens PA1... 199 7e-49 CP001488_135(CP001488|pid:none) Brucella melitensis ATCC 23457 c... 199 7e-49 AC3477(AC3477) DNA mismatch repair protein mutS [imported] - Bru... 199 7e-49 AM980462_1(AM980462|pid:none) Staphylococcus aureus subsp. aureu... 198 9e-49 AF245440_4(AF245440|pid:none) Pseudomonas fluorescens lipoprotei... 198 9e-49 (Q7UZL6) RecName: Full=DNA mismatch repair protein mutS; &BX548... 198 9e-49 CP001029_4699(CP001029|pid:none) Methylobacterium populi BJ001, ... 198 9e-49 (Q49X88) RecName: Full=DNA mismatch repair protein mutS; &AP008... 198 1e-48 (A6LG92) RecName: Full=DNA mismatch repair protein mutS; &CP000... 198 1e-48 (Q2FYZ9) RecName: Full=DNA mismatch repair protein mutS; &AF378... 198 1e-48 (A1AMW9) RecName: Full=DNA mismatch repair protein mutS; &CP000... 198 1e-48 CP000301_359(CP000301|pid:none) Rhodopseudomonas palustris BisB1... 197 1e-48 (Q21CE8) RecName: Full=DNA mismatch repair protein mutS; 197 1e-48 (Q67NK1) RecName: Full=DNA mismatch repair protein mutS; &AP006... 197 2e-48 CP001280_2272(CP001280|pid:none) Methylocella silvestris BL2, co... 197 2e-48 CP000633_325(CP000633|pid:none) Agrobacterium vitis S4 chromosom... 197 2e-48 (Q2LUL3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 197 2e-48 CP001281_2220(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 197 2e-48 CP000628_483(CP000628|pid:none) Agrobacterium radiobacter K84 ch... 197 2e-48 (A3PFD3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 197 2e-48 (A1KWM6) RecName: Full=DNA mismatch repair protein mutS; &AM421... 196 3e-48 (Q8PMX2) RecName: Full=DNA mismatch repair protein mutS; &AE008... 196 3e-48 (O66652) RecName: Full=DNA mismatch repair protein mutS; &AE000... 196 3e-48 (Q9JX94) RecName: Full=DNA mismatch repair protein mutS; &A8100... 196 3e-48 (A5GQ22) RecName: Full=DNA mismatch repair protein mutS; &CT978... 196 3e-48 CP000090_1107(CP000090|pid:none) Ralstonia eutropha JMP134 chrom... 196 3e-48 CP001111_1166(CP001111|pid:none) Stenotrophomonas maltophilia R5... 196 3e-48 (A4JFW7) RecName: Full=DNA mismatch repair protein mutS; &CP000... 196 4e-48 CP000967_3186(CP000967|pid:none) Xanthomonas oryzae pv. oryzae P... 196 6e-48 (A5VA00) RecName: Full=DNA mismatch repair protein mutS; &CP000... 196 6e-48 CP001408_2699(CP001408|pid:none) Burkholderia pseudomallei MSHR3... 196 6e-48 CP000572_2580(CP000572|pid:none) Burkholderia pseudomallei 1106a... 196 6e-48 (Q3BVY0) RecName: Full=DNA mismatch repair protein mutS; &AM039... 196 6e-48 (A1UU95) RecName: Full=DNA mismatch repair protein mutS; &CP000... 196 6e-48 (A3NWZ4) RecName: Full=DNA mismatch repair protein mutS; 196 6e-48 (Q5H2C5) RecName: Full=DNA mismatch repair protein mutS; &AE013... 196 6e-48 (Q5F5J4) RecName: Full=DNA mismatch repair protein mutS; &AE004... 195 7e-48 (Q1QQJ4) RecName: Full=DNA mismatch repair protein mutS; &CP000... 195 7e-48 (Q0BDU3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 195 7e-48 CP001025_1976(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 195 7e-48 (Q55GU9) RecName: Full=DNA mismatch repair protein Msh6; 195 9e-48 (A1V5I2) RecName: Full=DNA mismatch repair protein mutS; &(A2SA... 195 9e-48 CP000526_2129(CP000526|pid:none) Burkholderia mallei SAVP1 chrom... 195 9e-48 (Q63SR9) RecName: Full=DNA mismatch repair protein mutS; &BX571... 195 9e-48 DQ465631_1(DQ465631|pid:none) Neisseria meningitidis strain Z126... 194 1e-47 (Q9JWT7) RecName: Full=DNA mismatch repair protein mutS; &AL157... 194 1e-47 CP000270_2800(CP000270|pid:none) Burkholderia xenovorans LB400 c... 194 1e-47 (Q13X51) RecName: Full=DNA mismatch repair protein mutS; 194 1e-47 (Q64MG7) RecName: Full=DNA mismatch repair protein mutS; &AP006... 194 2e-47 (Q47DJ8) RecName: Full=DNA mismatch repair protein mutS; &CP000... 194 2e-47 (Q5L7B7) RecName: Full=DNA mismatch repair protein mutS; &CR626... 194 2e-47 (Q87CI8) RecName: Full=DNA mismatch repair protein mutS; &AE009... 194 2e-47 CP001011_1116(CP001011|pid:none) Xylella fastidiosa M23, complet... 194 2e-47 (A8I275) RecName: Full=DNA mismatch repair protein mutS; &AP009... 194 2e-47 CP001503_2300(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 193 3e-47 (A2BTM6) RecName: Full=DNA mismatch repair protein mutS; &CP000... 193 4e-47 CP001050_2322(CP001050|pid:none) Neisseria gonorrhoeae NCCP11945... 193 4e-47 (Q2UT70) RecName: Full=DNA mismatch repair protein msh3; AltName... 193 4e-47 (Q8A334) RecName: Full=DNA mismatch repair protein mutS; &AE015... 193 4e-47 CP001392_1064(CP001392|pid:none) Diaphorobacter sp. TPSY, comple... 192 5e-47 AP009385_2024(AP009385|pid:none) Burkholderia multivorans ATCC 1... 192 5e-47 AE017321_254(AE017321|pid:none) Wolbachia endosymbiont strain TR... 192 6e-47 CP001131_2141(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 192 8e-47 (P61673) RecName: Full=DNA mismatch repair protein mutS; 192 8e-47 AE017196_167(AE017196|pid:none) Wolbachia endosymbiont of Drosop... 192 8e-47 (Q7W880) RecName: Full=DNA mismatch repair protein mutS; 191 1e-46 AM270298_35(AM270298|pid:none) Aspergillus niger contig An13c004... 191 1e-46 BX640429_310(BX640429|pid:none) Bordetella parapertussis strain ... 191 1e-46 (Q1MRT4) RecName: Full=DNA mismatch repair protein mutS; &AM180... 191 1e-46 (Q39EX8) RecName: Full=DNA mismatch repair protein mutS; &CP000... 191 1e-46 (Q5LWH0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 191 2e-46 (P74926) RecName: Full=DNA mismatch repair protein mutS; &AE000... 191 2e-46 (A4WVX8) RecName: Full=DNA mismatch repair protein mutS; &CP000... 191 2e-46 AY187681_3(AY187681|pid:none) Vibrio vulnificus lipoprotein D (n... 191 2e-46 CP001101_799(CP001101|pid:none) Chlorobium phaeobacteroides BS1,... 190 2e-46 (Q89VX1) RecName: Full=DNA mismatch repair protein mutS; &BA000... 190 2e-46 CU459003_3291(CU459003|pid:none) Magnetospirillum gryphiswaldens... 190 2e-46 (A0K8L2) RecName: Full=DNA mismatch repair protein mutS; &CP000... 190 3e-46 (Q2RNG0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 190 3e-46 CP000958_2087(CP000958|pid:none) Burkholderia cenocepacia MC0-3 ... 190 3e-46 (Q1BHQ1) RecName: Full=DNA mismatch repair protein mutS; &CP000... 190 3e-46 BX640442_21(BX640442|pid:none) Bordetella bronchiseptica strain ... 189 4e-46 (A1BHN5) RecName: Full=DNA mismatch repair protein mutS; &CP000... 189 4e-46 (A6U5G0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 189 5e-46 (Q3AQZ8) RecName: Full=DNA mismatch repair protein mutS; &CP000... 189 5e-46 CP000613_2835(CP000613|pid:none) Rhodospirillum centenum SW, com... 189 5e-46 (P56883) RecName: Full=DNA mismatch repair protein mutS; &AL591... 189 7e-46 AF227730_1(AF227730|pid:none) Sinorhizobium meliloti mismatch re... 189 7e-46 CP001150_2616(CP001150|pid:none) Rhodobacter sphaeroides KD131 c... 189 7e-46 (Q1DQ73) RecName: Full=DNA mismatch repair protein MSH3; AltName... 189 7e-46 (Q3IYI5) RecName: Full=DNA mismatch repair protein mutS; &CP000... 189 7e-46 CP000975_109(CP000975|pid:none) Methylacidiphilum infernorum V4,... 189 7e-46 AM999887_388(AM999887|pid:none) Wolbachia endosymbiont of Culex ... 188 9e-46 (A3PNR5) RecName: Full=DNA mismatch repair protein mutS; &CP000... 188 1e-45 (Q11YS6) RecName: Full=DNA mismatch repair protein mutS; &CP000... 187 2e-45 CP000786_813(CP000786|pid:none) Leptospira biflexa serovar Patoc... 187 2e-45 CP000777_788(CP000777|pid:none) Leptospira biflexa serovar Patoc... 187 2e-45 (A6R7S1) RecName: Full=DNA mismatch repair protein MSH3; AltName... 187 2e-45 CP000254_3127(CP000254|pid:none) Methanospirillum hungatei JF-1,... 187 3e-45 CU062463_8(CU062463|pid:none) Onchocerca Wolbachia Sequence Frag... 187 3e-45 (Q9PLD0) RecName: Full=DNA mismatch repair protein mutS; &AE002... 186 3e-45 (Q16D05) RecName: Full=DNA mismatch repair protein mutS; &CP000... 186 3e-45 (Q7MXR7) RecName: Full=DNA mismatch repair protein mutS; &AE015... 186 3e-45 CP001074_420(CP001074|pid:none) Rhizobium etli CIAT 652, complet... 186 3e-45 AP009380_2041(AP009380|pid:none) Porphyromonas gingivalis ATCC 3... 186 3e-45 CP000943_6202(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 186 4e-45 (A7HZ64) RecName: Full=DNA mismatch repair protein mutS; &CP000... 186 4e-45 (Q1GCK9) RecName: Full=DNA mismatch repair protein mutS; &CP000... 185 7e-45
>AC116960_5(AC116960|pid:none) Dictyostelium discoideum chromosome 2 map complement(1004496-821614) strain AX4, complete sequence. Length = 916
Score = 1044 bits (2700), Expect(2) = 0.0 Identities = 541/601 (90%), Positives = 541/601 (90%) Frame = +1
Query: 82 MSDNEQEESSQVVLKEDKTFVTFFQSLVSSNEDTDTIRLFDRKGYYSIHGEDAVFVAMMH 261 MSDNEQEESSQVVLKEDKTFVTFFQSLVSSNEDTDTIRLFDRK Sbjct: 1 MSDNEQEESSQVVLKEDKTFVTFFQSLVSSNEDTDTIRLFDRK----------------- 43
Query: 262 FKSKKSLKYWSISDPNPKKKIKIDNDGSLTTTAXXXXXXXXELGLAVLTIRQGYEFENIV 441 KSLKYWSISDPNPKKKIKIDNDGSLTTTA ELGLAVLTIRQGYEFENIV Sbjct: 44 ----KSLKYWSISDPNPKKKIKIDNDGSLTTTASSSQQQQQELGLAVLTIRQGYEFENIV 99
Query: 442 XXXXXXXXXXXXWSMKPNSKQQWELIKKGSPGNTQMFEDVLLNGNCEGSVMMALKVTREK 621 WSMKPNSKQQWELIKKGSPGNTQMFEDVLLNGNCEGSVMMALKVTREK Sbjct: 100 KELLDEKKKIEIWSMKPNSKQQWELIKKGSPGNTQMFEDVLLNGNCEGSVMMALKVTREK 159
Query: 622 GSIVFGISFGDATFKTIGVSQFMDNDNLSNLSSFIMQMSVKECLLCCDQKNYDYQKVKEK 801 GSIVFGISFGDATFKTIGVSQFMDNDNLSNLSSFIMQMSVKECLLCCDQKNYDYQKVKEK Sbjct: 160 GSIVFGISFGDATFKTIGVSQFMDNDNLSNLSSFIMQMSVKECLLCCDQKNYDYQKVKEK 219
Query: 802 LSDAGIPFTELPKSDFSSKNAEQDLTRLLGSVKNNLPDIEQEHAIQSASCLIKHLDLLSN 981 LSDAGIPFTELPKSDFSSKNAEQDLTRLLGSVKNNLPDIEQEHAIQSASCLIKHLDLLSN Sbjct: 220 LSDAGIPFTELPKSDFSSKNAEQDLTRLLGSVKNNLPDIEQEHAIQSASCLIKHLDLLSN 279
Query: 982 PNYFGKFKLEKYDLDRYMKLDSSSFKGLHIIDLKDXXXXXXXXXXXXXXXXXXXNKDQSL 1161 PNYFGKFKLEKYDLDRYMKLDSSSFKGLHIIDLKD NKDQSL Sbjct: 280 PNYFGKFKLEKYDLDRYMKLDSSSFKGLHIIDLKDSSVSAAAGGGGAGGASSSSNKDQSL 339
Query: 1162 YNLLNQCNTPMGSRLLLQWVKQPLLNAEEIEARLNFVEAFYNDLELRQSLRSNDLKKIGD 1341 YNLLNQCNTPMGSRLLLQWVKQPLLNAEEIEARLNFVEAFYNDLELRQSLRSNDLKKIGD Sbjct: 340 YNLLNQCNTPMGSRLLLQWVKQPLLNAEEIEARLNFVEAFYNDLELRQSLRSNDLKKIGD 399
Query: 1342 LDRLSKKLHGQKATLEDCVNLYGIVTRLPVVLQSLNNHSSIHQELIKVNFIESLESIISD 1521 LDRLSKKLHGQKATLEDCVNLYGIVTRLPVVLQSLNNHSSIHQELIKVNFIESLESIISD Sbjct: 400 LDRLSKKLHGQKATLEDCVNLYGIVTRLPVVLQSLNNHSSIHQELIKVNFIESLESIISD 459
Query: 1522 FAKFCAMVEKTIDLDLANDKHEYVIRSSFDETLRGIQLKKDQISNKIERFRVDIADDLNL 1701 FAKFCAMVEKTIDLDLANDKHEYVIRSSFDETLRGIQLKKDQISNKIERFRVDIADDLNL Sbjct: 460 FAKFCAMVEKTIDLDLANDKHEYVIRSSFDETLRGIQLKKDQISNKIERFRVDIADDLNL 519
Query: 1702 DEAKVKLHYSEKDMFLLRISRKDEVAIRDKKKYIVHATAKDGVRFATREIDTLNEAYKKW 1881 DEAKVKLHYSEKDMFLLRISRKDEVAIRDKKKYIVHATAKDGVRFATREIDTLNEAYKKW Sbjct: 520 DEAKVKLHYSEKDMFLLRISRKDEVAIRDKKKYIVHATAKDGVRFATREIDTLNEAYKKW 579
Query: 1882 S 1884 S Sbjct: 580 S 580
Score = 89.4 bits (220), Expect(2) = 0.0 Identities = 45/45 (100%), Positives = 45/45 (100%) Frame = +3
Query: 1896 LIEDLSSLIATLDVFVTLSHVSSIAPIPFIRPEIIPLGSDENGAG 2030 LIEDLSSLIATLDVFVTLSHVSSIAPIPFIRPEIIPLGSDENGAG Sbjct: 604 LIEDLSSLIATLDVFVTLSHVSSIAPIPFIRPEIIPLGSDENGAG 648
Score = 504 bits (1298), Expect = e-141 Identities = 255/269 (94%), Positives = 255/269 (94%) Frame = +1
Query: 2029 GTVIIGGRHPCVEIQDNVNFIANDIDLTRGQSQFQIITGPNMGGKSTFIRQVGLIVLMAQ 2208 GTVIIGGRHPCVEIQDNVNFIANDIDLTRGQSQFQIITGPNMGGKSTFIRQVGLIVLMAQ Sbjct: 648 GTVIIGGRHPCVEIQDNVNFIANDIDLTRGQSQFQIITGPNMGGKSTFIRQVGLIVLMAQ 707
Query: 2209 IGCFVPAQKATIAVVDCILSRVGAGDSQLRGVSTFMAEMLETSYILKVATKNSLIIIDEL 2388 IGCFVPAQKATIAVVDCILSRVGAGDSQLRGVSTFMAEMLETSYILKVATKNSLIIIDEL Sbjct: 708 IGCFVPAQKATIAVVDCILSRVGAGDSQLRGVSTFMAEMLETSYILKVATKNSLIIIDEL 767
Query: 2389 GRGTSTYDGFGLAWGIAEYICNQIGGFCLFATHFHELTILSDLLPMVKNLHVSASTQNNT 2568 GRGTSTYDGFGLAWGIAEYICNQIGGFCLFATHFHELTILSDLLPMVKNLHVSASTQNNT Sbjct: 768 GRGTSTYDGFGLAWGIAEYICNQIGGFCLFATHFHELTILSDLLPMVKNLHVSASTQNNT 827
Query: 2569 FTLLYKVEQGPCDQSFGIHVAILANFPSQVIENAKQKAKELESFESNTLKQNHNKFLEEF 2748 FTLLYKVEQGPCDQSFGIHVAILANFPSQVIENAKQKAKELESFESNTLKQNHNKFLEEF Sbjct: 828 FTLLYKVEQGPCDQSFGIHVAILANFPSQVIENAKQKAKELESFESNTLKQNHNKFLEEF 887
Query: 2749 KEINFNSNDVEXXXXXXXXXXXXXXIDIN 2835 KEINFNSNDVE IDIN Sbjct: 888 KEINFNSNDVEKSLSLVNSLLNKYSIDIN 916
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3204285 Number of Hits to DB: 4,118,217,276 Number of extensions: 76563404 Number of successful extensions: 200960 Number of sequences better than 10.0: 1228 Number of HSP's gapped: 199562 Number of HSP's successfully gapped: 1904 Length of query: 1009 Length of database: 1,040,966,779 Length adjustment: 139 Effective length of query: 870 Effective length of database: 595,571,164 Effective search space: 518146912680 Effective search space used: 518146912680 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 32 (16.9 bits)
|
PSORT |
|
VS (DIR, S) |
0 |
VH (FL, L) |
3 |
VF (FL, S) |
0 |
AH (FL, L) |
24 |
AF (FL, S) |
1 |
SL (DIR, L) |
0 |
SS (DIR, S) |
0 |
SH (FL, L) |
8 |
SF (FL, S) |
0 |
CH (FL, L) |
5 |
CF (FL, S) |
0 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
0 |
FC-IC (SUB) |
0 |