Contig-U01723-1
Contig ID Contig-U01723-1
Contig update 2001. 8.29
Contig sequence
>Contig-U01723-1 (Contig-U01723-1Q) /CSM_Contig/Contig-U01723-1Q.Seq.d
CCAACAATAACCAATTTTCAAGATAAAAAATAAAAAATAGTTTTAATATC
ATCAAAAATAGAAAATAGGAAAAAAAGAAAGAGAAAAGNGGAGGAGGAGG
AGTGGTTTTAATTAAAAAAAAAAAAAAAAAAAAAAAATTAAATATAAATA
GTTAAATGCAAAACAATTATAGAAATAGTGGTAATGGTAGTGGTGGACAA
CAGCAACAACAACAAATTATAACGATAACAATACCAAGAGATTATAAAGA
TATTGTAACGAAATTTGAAAGACAATCATTCCCAGATGAATTATCAAGGA
ATGGTGTTAGTTTAGTTGAATTTGAATTCACAATAAATGAAATTAATAGA
ATATTACAAAAAGCAGAAACTATCGATTCAACCACTGTCATTGAAGAAAT
CATTGGTTGTTTAACTTTTTTTAGTATATTTTTATTTTATGATGATAAAT
ATAAAAAGTGTATAAA----------AATAATAATAATAATAATAATAAT
AATAATATACAATCATCACCATTTAGATCTAGATTGAATTTAGAGGAAAA
AGATGTTTTAAAACCAGAGACTATAATAAATGTTGTTACAAATAGTAGTA
TTGTAGAGTTATCAGATGAAGAGGATGAAGATGATGCAAACGATGAAAGT
AATCTATCTTTTAATAATAATAATAGTGGTGATCATGGTGGTTCAAGTAG
TAGAGATATAAATAATAGTGGTTAAATAATTATAATAATAAATATTTACA
GAATAAAGATTTTTATTTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAA

Gap gap included
Contig length 811
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 7474418
End point 7475184
Strand (PLUS/MINUS) PLUS
Number of clones 2
Number of EST 3
Link to clone list U01723
List of clone(s)

est1=SSF606F,1,467
est2=SSK142Z,468,813
est3=SSF606Z,473,785
Translated Amino Acid sequence
nnnqfsr*kiknsfniiknrk*ekkkekxggggvvlikkkkkkkklnins*MQNNYRNSG
NGSGGQQQQQQIITITIPRDYKDIVTKFERQSFPDELSRNGVSLVEFEFTINEINRILQK
AETIDSTTVIEEIIGCLTFFSIFLFYDDKYKKCI---

---NNNNNNNNNNIQSSPFRSRLNLEEKDVLKPETIINVVTNSSIVELSDEEDEDDANDE
SNLSFNNNNSGDHGGSSSRDINNSG*iiiiiniyrikifiykkkkkkkkkkkkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
ptitnfqdkk*kivlisskienrkkrkrkxeeeewf*lkkkkkkkn*i*ivkcktiieiv
vmvvvdnsnnnkl*r*qyqeiikil*rnlkdnhsqmnyqgmvlv*lnlnsq*mklieyyk
kqklsiqplslkkslvv*lflvyfyfmminiksv*---

---NNNNNNNNNNIQSSPFRSRLNLEEKDVLKPETIINVVTNSSIVELSDEEDEDDANDE
SNLSFNNNNSGDHGGSSSRDINNSG*iiiiiniyrikifiykkkkkkkkkkkkkkkkk

Frame B:
qq*pifkiknkk*f*yhqk*kigkkerekxrrrsgfn*kkkkkkkikyk*lnakql*k*w
*w*wwttatttnyndnntkrl*rycnei*ktiipr*iikewc*fs*i*ihnk*n**nitk
srnyrfnhch*rnhwlfnff*yifil***i*kvyk---

---iiiiiiiiiiynhhhldld*i*rkkmf*nqrl**mllqivvl*syqmkrmkmmqtmk
viylliiiivvimvvqvvei*iivvk*l***ifte*rflfikkkkkkkkkkkkkkkk

Frame C:
nnnqfsr*kiknsfniiknrk*ekkkekxggggvvlikkkkkkkklnins*MQNNYRNSG
NGSGGQQQQQQIITITIPRDYKDIVTKFERQSFPDELSRNGVSLVEFEFTINEINRILQK
AETIDSTTVIEEIIGCLTFFSIFLFYDDKYKKCI---

---*********ytiiti*i*iefrgkrcfktrdynkccyk**ycrvir*rg*r*ckr*k
*sif*****w*swwfk**ryk**wlnnynnkylqnkdfyl*kkkkkkkkkkkkkkkk

own update 2004. 6. 7
Homology vs CSM-cDNA
Query= Contig-U01723-1 (Contig-U01723-1Q)
/CSM_Contig/Contig-U01723-1Q.Seq.d
(821 letters)

Database: CSM
8361 sequences; 7,895,291 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U01723-1 (Contig-U01723-1Q) /CSM_Contig/Conti... 611 e-175
Contig-U13952-1 (Contig-U13952-1Q) /CSM_Contig/Conti... 46 8e-05
Contig-U13346-1 (Contig-U13346-1Q) /CSM_Contig/Conti... 44 3e-04
Contig-U06745-1 (Contig-U06745-1Q) /CSM_Contig/Conti... 44 3e-04
Contig-U03919-1 (Contig-U03919-1Q) /CSM_Contig/Conti... 44 3e-04
Contig-U11972-1 (Contig-U11972-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U11251-1 (Contig-U11251-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U04427-1 (Contig-U04427-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U14477-1 (Contig-U14477-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U14181-1 (Contig-U14181-1Q) /CSM_Contig/Conti... 40 0.005

>Contig-U01723-1 (Contig-U01723-1Q) /CSM_Contig/Contig-U01723-1Q.Seq.d
Length = 821

Score = 611 bits (308), Expect = e-175
Identities = 322/329 (97%)
Strand = Plus / Plus


Query: 138 ttaaatataaatagttaaatgcaaaacaattatagaaatagtggtaatggtagtggtgga 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 ttaaatataaatagttaaatgcaaaacaattatagaaatagtggtaatggtagtggtgga 197


Query: 198 caacagcaacaacaacaaattataacgataacaataccaagagattataaagatattgta 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 caacagcaacaacaacaaattataacgataacaataccaagagattataaagatattgta 257


Query: 258 acgaaatttgaaagacaatcattcccagatgaattatcaaggaatggtgttagtttagtt 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 acgaaatttgaaagacaatcattcccagatgaattatcaaggaatggtgttagtttagtt 317


Query: 318 gaatttgaattcacaataaatgaaattaatagaatattacaaaaagcagaaactatcgat 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gaatttgaattcacaataaatgaaattaatagaatattacaaaaagcagaaactatcgat 377


Query: 378 tcaaccactgtcattgaagaaatcattggttgtttaacnnnnnnnagtatatttttattt 437
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 378 tcaaccactgtcattgaagaaatcattggttgtttaactttttttagtatatttttattt 437


Query: 438 tatgatgataaatataaaaagtgtataaa 466
|||||||||||||||||||||||||||||
Sbjct: 438 tatgatgataaatataaaaagtgtataaa 466


Score = 393 bits (198), Expect = e-109
Identities = 198/198 (100%)
Strand = Plus / Plus


Query: 508 tacaatcatcaccatttagatctagattgaatttagaggaaaaagatgttttaaaaccag 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tacaatcatcaccatttagatctagattgaatttagaggaaaaagatgttttaaaaccag 567


Query: 568 agactataataaatgttgttacaaatagtagtattgtagagttatcagatgaagaggatg 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 agactataataaatgttgttacaaatagtagtattgtagagttatcagatgaagaggatg 627


Query: 628 aagatgatgcaaacgatgaaagtaatctatcttttaataataataatagtggtgatcatg 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 aagatgatgcaaacgatgaaagtaatctatcttttaataataataatagtggtgatcatg 687


Query: 688 gtggttcaagtagtagag 705
||||||||||||||||||
Sbjct: 688 gtggttcaagtagtagag 705


Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus


Query: 745 tttacagaataaagatttttatttat 770
||||||||||||||||||||||||||
Sbjct: 745 tttacagaataaagatttttatttat 770


Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus


Query: 90 ggaggaggaggagtggttttaatt 113
||||||||||||||||||||||||
Sbjct: 90 ggaggaggaggagtggttttaatt 113


Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus


Query: 1 ccaacaataaccaattttcaagat 24
||||||||||||||||||||||||
Sbjct: 1 ccaacaataaccaattttcaagat 24


Score = 32.2 bits (16), Expect = 1.3
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 38 tagttttaatatcatc 53
||||||||||||||||
Sbjct: 38 tagttttaatatcatc 53


>Contig-U13952-1 (Contig-U13952-1Q) /CSM_Contig/Contig-U13952-1Q.Seq.d
Length = 1198

Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 614 agatgaagaggatgaagatgatg 636
|||||||||||||||||||||||
Sbjct: 1117 agatgaagaggatgaagatgatg 1139


>Contig-U13346-1 (Contig-U13346-1Q) /CSM_Contig/Contig-U13346-1Q.Seq.d
Length = 1364

Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 662 taataataataatagtggtgat 683
||||||||||||||||||||||
Sbjct: 716 taataataataatagtggtgat 737


Score = 30.2 bits (15), Expect = 5.0
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 197 acaacagcaacaacaacaa 215
|||||| ||||||||||||
Sbjct: 1015 acaacaacaacaacaacaa 1033


Score = 30.2 bits (15), Expect = 5.0
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 197 acaacagcaacaacaacaa 215
|||||| ||||||||||||
Sbjct: 1012 acaacaacaacaacaacaa 1030


Score = 30.2 bits (15), Expect = 5.0
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 197 acaacagcaacaacaacaa 215
|||||| ||||||||||||
Sbjct: 1018 acaacaacaacaacaacaa 1036


Score = 30.2 bits (15), Expect = 5.0
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 197 acaacagcaacaacaacaa 215
|||||| ||||||||||||
Sbjct: 1009 acaacaacaacaacaacaa 1027


Database: CSM
Posted date: Jun 7, 2004 8:33 AM
Number of letters in database: 7,895,291
Number of sequences in database: 8361

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 50,171
Number of Sequences: 8361
Number of extensions: 50171
Number of successful extensions: 19959
Number of sequences better than 10.0: 1638
length of query: 821
length of database: 7,895,291
effective HSP length: 16
effective length of query: 805
effective length of database: 7,761,515
effective search space: 6248019575
effective search space used: 6248019575
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 5. 4
Homology vs DNA
Query= Contig-U01723-1 (Contig-U01723-1Q) /CSM_Contig/Contig-U01723-1Q.Seq.d
(821 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 551 0.0 4
(C92875) Dictyostelium discoideum slug cDNA, clone SSF606. 389 e-103 1
(C91376) Dictyostelium discoideum slug cDNA, clone SSK142. 389 e-103 1
(AU072975) Dictyostelium discoideum slug cDNA, clone SSF606. 204 5e-54 2
(AU060729) Dictyostelium discoideum slug cDNA, clone SLB260. 38 7e-06 4
(C84779) Dictyostelium discoideum slug cDNA, clone SSF716. 36 1e-05 4
(AF362374) Dictyostelium discoideum histidine kinase DhkM (d... 38 0.001 4
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975... 44 0.002 3
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 42 0.002 5
(AC116551) Dictyostelium discoideum chromosome 2 map complem... 40 0.003 4
(CR626941) Zebrafish DNA sequence from clone DKEY-12J5 in li... 40 0.004 6
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 38 0.004 7
(AC117080) Dictyostelium discoideum chromosome 2 map complem... 38 0.005 5
(BJ365732) Dictyostelium discoideum cDNA clone:ddc36m09, 5' ... 40 0.005 2
(AY160103) Dictyostelium discoideum nucleotide exchange fact... 42 0.006 3
(FE260593) CAZO1071.fwd CAZO Naegleria gruberi Flagellate St... 42 0.008 2
(AY232271) Dictyostelium discoideum putative protein Roco9 (... 40 0.008 3
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 40 0.009 4
(FM992688) Candida dubliniensis CD36 chromosome 1, complete ... 42 0.010 9
(AU037277) Dictyostelium discoideum slug cDNA, clone SSB704. 32 0.012 4
(AF362371) Dictyostelium discoideum histidine kinase DhkI (d... 38 0.014 4
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 38 0.017 5
(EG558221) CR03001A07 Root CR03 cDNA library Catharanthus ro... 50 0.020 2
(FE265357) CAZO4434.fwd CAZO Naegleria gruberi Flagellate St... 40 0.021 2
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 32 0.028 7
(FM992694) Candida dubliniensis CD36 chromosome 7, complete ... 40 0.028 7
(EY315118) CAWX25883.fwd CAWX Helobdella robusta Primary Ear... 38 0.029 2
(AC115682) Dictyostelium discoideum chromosome 2 map 4101105... 38 0.033 4
(EJ974145) 1093022103919 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.034 1
(EJ925092) 1093018778259 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.034 1
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 40 0.045 6
(EY376111) CAXA15996.fwd CAXA Helobdella robusta Subtracted ... 36 0.051 3
(AM181592) Dictyostelium discoideum AX2 mRNA for Trix, Rac g... 38 0.054 3
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 38 0.059 3
(AC177087) Strongylocentrotus purpuratus clone R3-4005A06, W... 48 0.065 5
(AC204048) Zea mays chromosome 5 clone CH201-51G15; ZMMBBc00... 40 0.083 2
(AY232273) Dictyostelium discoideum putative protein Roco11 ... 40 0.093 3
(AL844509) Plasmodium falciparum chromosome 13. 44 0.093 9
(EY335292) CAWY6925.rev CAWY Helobdella robusta Subtracted E... 38 0.099 2
(AC115578) Dictyostelium discoideum chromosome 2 map complem... 32 0.10 5
(CU694699) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 0.11 3
(X96869) D.discoideum dokA gene. 38 0.11 4
(AR545879) Sequence 1010 from patent US 6747137. 34 0.11 3
(AY184993) Dictyostelium discoideum inositol 5-phosphatase 2... 36 0.12 3
(EY373957) CAXA14826.fwd CAXA Helobdella robusta Subtracted ... 38 0.12 2
(DR750157) 69-L021844-065-006-D10S-SeLA MPIZ-ADIS-065d Arabi... 38 0.12 2
(AY924730) Arabidopsis thaliana hypothetical protein (At1g75... 38 0.13 2
(CU855905) Zebrafish DNA sequence from clone CH73-190M24 in ... 50 0.14 1
(BX004962) Zebrafish DNA sequence from clone CH211-93N23 in ... 50 0.14 1
(AC154084) Dasypus novemcinctus clone VMRC5-516O22, WORKING ... 50 0.14 1
(AC187199) Dasypus novemcinctus clone VMRC5-73I24, WORKING D... 50 0.14 1
(DU752954) ASNF2866.b2 HF130_10-06-02 uncultured marine micr... 50 0.14 1
(BZ075794) lki53f11.g1 B.oleracea002 Brassica oleracea genom... 50 0.14 1
(AC004157) Plasmodium falciparum chromosome 12 clone PFYAC29... 38 0.15 5
(BX813430) Arabidopsis thaliana Full-length cDNA Complete se... 38 0.17 2
(AL354938) Human DNA sequence from clone RP11-86L19 on chrom... 42 0.17 4
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 42 0.18 4
(AY800620) Arabidopsis thaliana clone H0000001204 hypothetic... 38 0.20 2
(CU462994) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 0.21 5
(AF362375) Dictyostelium discoideum histidine kinase DhkE (d... 38 0.21 2
(AE013599) Drosophila melanogaster chromosome 2R, complete s... 36 0.23 2
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 46 0.27 3
(BS000126) Pan troglodytes chromosome 22 clone:PTB-128A24, m... 40 0.28 5
(BJ359661) Dictyostelium discoideum cDNA clone:ddc15g23, 5' ... 40 0.29 2
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 36 0.29 5
(FM992690) Candida dubliniensis CD36 chromosome 3, complete ... 42 0.30 5
(AC099016) Drosophila melanogaster, chromosome 2R, region 56... 36 0.30 2
(AC018184) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 36 0.31 2
(AC008188) Drosophila melanogaster, chromosome 2R, region 56... 36 0.31 2
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 38 0.31 2
(EH010255) USDA-FP_183372 Lysiphlebus testaceipes adult whol... 44 0.31 2
(DQ378293) Drosophila virilis strain Tucson 15010-1001.10 fo... 36 0.32 3
(CQ594728) Sequence 22486 from Patent WO0171042. 36 0.33 2
(AC186775) Trichinella spiralis chromosome UNK clone TS195-1... 38 0.33 5
(AC004322) Drosophila melanogaster DNA sequence (P1 DS01962 ... 36 0.33 2
(AC226286) Ornithorhynchus anatinus clone OA_Bb-454P6, WORKI... 42 0.33 2
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 40 0.34 3
(BJ375928) Dictyostelium discoideum cDNA clone:ddc20f15, 3' ... 38 0.34 2
(BJ370390) Dictyostelium discoideum cDNA clone:ddc53o22, 5' ... 38 0.34 2
(DY893256) CeleSEQ12543 Cunninghamella elegans pBluescript (... 38 0.36 3
(EY372470) CAXA14028.fwd CAXA Helobdella robusta Subtracted ... 40 0.41 2
(U23477) Dictyostelium discoideum phosphatidylinositol-4,5-d... 34 0.42 3
(DY892046) CeleSEQ8945 Cunninghamella elegans pBluescript (E... 44 0.42 2
(BV468248) G591P603518RC10.T0 Clint Pan troglodytes verus ST... 40 0.44 2
(AF340153) Dictyostelium discoideum calcium-dependent cell a... 38 0.45 2
(BV493207) S217P6936FA12.T0 Noemie Pan troglodytes troglodyt... 40 0.46 2
(AC162543) Bos taurus clone CH240-122H12, WORKING DRAFT SEQU... 40 0.46 5
(AL409627) T7 end of clone XAV0AA001A09 of library XAV0AA fr... 40 0.49 2
(AC180305) Strongylocentrotus purpuratus clone R3-3119N05, W... 36 0.49 6
(AC116987) Dictyostelium discoideum chromosome 2 map 3527441... 34 0.52 4
(AC187043) Trichinella spiralis chromosome UNK clone TS195-3... 42 0.53 5
(BV925058) pRRL2:Newb:20080411:305145 USMARC Pig Breed SNP D... 48 0.54 1
(CP000500) Pichia stipitis CBS 6054 chromosome 6, complete s... 48 0.54 1
(AC151458) Medicago truncatula chromosome 8 clone mth2-105a1... 48 0.54 1
(AC125480) Medicago truncatula chromosome 8 clone mth2-8c24,... 48 0.54 1
(AE014842) Plasmodium falciparum 3D7 chromosome 11 section 7... 48 0.54 1
(AC162114) Bos taurus clone CH240-25G7, WORKING DRAFT SEQUEN... 48 0.54 1
(AC184259) Strongylocentrotus purpuratus clone R3-9N9, WORKI... 48 0.54 1
(EJ055854) 1095456028404 Global-Ocean-Sampling_GS-26-01-01-1... 48 0.54 1
(EL497240) H10_PFBAMHI-M-T3-PLATE32A.AB1 Blood stage Plasmod... 48 0.54 1
(EY319202) CAWX6774.rev CAWX Helobdella robusta Primary Earl... 48 0.54 1
(DY894493) CeleSEQ14075 Cunninghamella elegans pBluescript (... 38 0.55 3
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 38 0.60 4
(DY891057) CeleSEQ7578 Cunninghamella elegans pBluescript (E... 34 0.65 3
(AC148793) Otolemur garnettii clone CH256-410A16, WORKING DR... 40 0.66 3
(AL959489) Xenopus tropicalis EST, clone TGas087d14 5'. 44 0.69 2
(DY890699) CeleSEQ9904 Cunninghamella elegans pBluescript (E... 34 0.69 3
(AC176763) Strongylocentrotus purpuratus clone R3-3097O22, W... 40 0.73 2
(CX487227) JGI_XZG29564.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 0.77 2
(AC191656) Trichinella spiralis BAC clone TS195-10H12 from c... 42 0.78 5
(AC092958) Homo sapiens 3 BAC RP11-639B1 (Roswell Park Cance... 40 0.78 6
(EB793992) 5801678 ZF01 Danio rerio cDNA clone 2241866, mRNA... 38 0.83 2
(AC115606) Dictyostelium discoideum chromosome 2 map 159760-... 40 0.83 4
(AU061023) Dictyostelium discoideum slug cDNA, clone SLC659. 38 0.86 2
(EK224434) 1095460153954 Global-Ocean-Sampling_GS-31-01-01-1... 40 0.88 3
(BJ323667) Dictyostelium discoideum cDNA clone:dda11n13, 5' ... 36 0.92 2
(AL954990) Xenopus tropicalis EST, clone TGas085k09 5'. 44 0.93 2
(AC177373) Strongylocentrotus purpuratus clone R3-1031P07, W... 36 0.93 5
(AC180700) Strongylocentrotus purpuratus clone R3-3087G09, W... 36 0.95 7
(AU266148) Dictyostelium discoideum vegetative cDNA clone:VS... 40 0.95 2
(DR897256) JGI_XZT41913.fwd NIH_XGC_tropTad5 Xenopus (Silura... 44 0.99 2
(AL629243) Xenopus tropicalis EST, clone TGas012g15 5'. 44 0.99 2
(AF481924) Dictyostelium discoideum cyclic GMP-binding prote... 36 1.0 3
(FP102263) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 1.0 5
(AC163114) Bos taurus clone CH240-130I1, WORKING DRAFT SEQUE... 40 1.0 2
(AL962804) Xenopus tropicalis EST, clone TGas107h17 5'. 44 1.0 2
(FM992695) Candida dubliniensis CD36 chromosome R, complete ... 40 1.0 7
(AL851686) Xenopus tropicalis EST, clone TEgg010n18 5'. 44 1.0 2
(AL593890) Xenopus tropicalis EST, clone TGas003i22 5'. 44 1.0 2
(AL851581) Xenopus tropicalis EST, clone TEgg010k18 5'. 44 1.0 2
(AC214652) Nomascus leucogenys BAC clone CH271-6H12 from chr... 40 1.1 2
(EY384627) CAXA5250.rev CAXA Helobdella robusta Subtracted L... 36 1.1 2
(AL783571) Xenopus tropicalis EST, clone TNeu068c17 5'. 44 1.1 2
(AL798825) Xenopus tropicalis EST, clone TNeu110o21 5'. 44 1.1 2
(AL968150) Xenopus tropicalis EST, clone TGas113l14 5'. 44 1.1 2
(AC118185) Rattus norvegicus clone CH230-168G23, *** SEQUENC... 34 1.1 2
(BJ423103) Dictyostelium discoideum cDNA clone:ddv48g02, 5' ... 38 1.1 2
(AF020407) Dictyostelium discoideum WimA (wimA) gene, partia... 42 1.1 2
(AL645907) Mouse DNA sequence from clone RP23-9N7 on chromos... 34 1.1 2
(AC105529) Rattus norvegicus clone CH230-218F4, WORKING DRAF... 34 1.1 2
(CX426905) JGI_XZG13636.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.1 2
(AU039450) Dictyostelium discoideum slug cDNA, clone SLH813. 36 1.1 2
(AL080248) Human DNA sequence from clone RP11-19D2 on chromo... 34 1.1 2
(AL679848) Xenopus tropicalis EST, clone TGas051d14 5'. 44 1.1 2
(AC208700) Zea mays chromosome 1 clone ZMMBBb-377A1; ZMMBBb0... 36 1.1 2
(AL676339) Xenopus tropicalis EST, clone TGas055f07 5'. 44 1.1 2
(AL956020) Xenopus tropicalis EST, clone TGas126e11 5'. 44 1.1 2
(CX459024) JGI_XZG27911.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.2 2
(AL630389) Xenopus tropicalis EST, clone TGas010b11 5'. 44 1.2 2
(AL681145) Xenopus tropicalis EST, clone TGas068m22 5'. 44 1.2 2
(AU060262) Dictyostelium discoideum slug cDNA, clone SLA766. 38 1.2 2
(AL681712) Xenopus tropicalis EST, clone TGas060e17 5'. 44 1.2 2
(CX429011) JGI_XZG19089.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.2 2
(CX459955) JGI_XZG28465.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.2 2
(CX477960) JGI_XZG20961.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.2 2
(CX420468) JGI_XZG15063.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.2 2
(EY384835) CAXA5366.fwd CAXA Helobdella robusta Subtracted L... 36 1.2 2
(CX475298) JGI_XZG49865.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.2 2
(AL857191) Xenopus tropicalis EST, clone TEgg050b19 5'. 44 1.2 2
(AC112120) Rattus norvegicus clone CH230-75F4, *** SEQUENCIN... 46 1.2 4
(AC115584) Dictyostelium discoideum chromosome 2 map complem... 38 1.2 5
(AL649799) Xenopus tropicalis EST, clone TGas030e22 5'. 44 1.2 2
(CX489791) JGI_XZG32879.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.2 2
(AL649717) Xenopus tropicalis EST, clone TGas050o15 5'. 44 1.2 2
(CX453961) JGI_XZG55139.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.3 2
(AU267559) Dictyostelium discoideum vegetative cDNA clone:VS... 36 1.3 2
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 38 1.3 4
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 42 1.3 3
(CX479644) JGI_XZG713.fwd NIH_XGC_tropGas7 Xenopus (Silurana... 44 1.3 2
(CX506268) JGI_XZG42444.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.3 2
(CX371484) JGI_XZT47520.fwd NIH_XGC_tropTad5 Xenopus (Silura... 44 1.3 2
(CX474008) JGI_XZG49113.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.3 2
(CX478905) JGI_XZG254.fwd NIH_XGC_tropGas7 Xenopus (Silurana... 44 1.3 2
(CX489042) JGI_XZG32452.rev NIH_XGC_tropGas7 Xenopus (Silura... 44 1.3 2
(CX483146) JGI_XZG51353.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.3 2
(CX388045) JGI_XZT21942.fwd NIH_XGC_tropTad5 Xenopus (Silura... 44 1.3 2
(CX461640) JGI_XZG24869.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.3 2
(EY384628) CAXA5250.fwd CAXA Helobdella robusta Subtracted L... 36 1.3 2
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 38 1.3 4
(CX503731) JGI_XZG40963.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.3 2
(CX489043) JGI_XZG32452.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.3 2
(CX433196) JGI_XZG16509.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.3 2
(CX515218) JGI_XZG45085.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.3 2
(CX426822) JGI_XZG13559.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.3 2
(CX423248) JGI_XZG63428.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.3 2
(CX434820) JGI_XZG17873.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.3 2
(CX496930) JGI_XZG43252.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.3 2
(CX460416) JGI_XZG28724.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.3 2
(CX452126) JGI_XZG23787.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.3 2
(CX392768) JGI_XZT39893.fwd NIH_XGC_tropTad5 Xenopus (Silura... 44 1.3 2
(CX417299) JGI_XZG64881.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.3 2
(EY339736) CAWY9865.fwd CAWY Helobdella robusta Subtracted E... 40 1.3 2
(CX494715) JGI_XZG37183.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.3 2
(CX454820) JGI_XZG56401.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.3 2
(CX419863) JGI_XZG14708.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.3 2
(EY369368) CAXA12326.rev CAXA Helobdella robusta Subtracted ... 36 1.3 2
(CX433678) JGI_XZG16793.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.4 2
(CX432860) JGI_XZG16297.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.4 2
(CX479543) JGI_XZG649.fwd NIH_XGC_tropGas7 Xenopus (Silurana... 44 1.4 2
(CX478988) JGI_XZG302.fwd NIH_XGC_tropGas7 Xenopus (Silurana... 44 1.4 2
(CX488455) JGI_XZG30281.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.4 2
(EY387143) CAXA6605.fwd CAXA Helobdella robusta Subtracted L... 38 1.4 2
(AC157498) Pan troglodytes BAC clone CH251-412M6 from chromo... 40 1.4 4
(CX439430) JGI_XZG7200.fwd NIH_XGC_tropGas7 Xenopus (Siluran... 44 1.4 2
(CX434024) JGI_XZG16994.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.4 2
(CX428031) JGI_XZG18522.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.4 2
(CX749026) JGI_ANHP1586.fwd NIH_XGC_tropNeu5 Xenopus (Silura... 44 1.4 2
(CX490488) JGI_XZG33280.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.4 2
(EY325432) CAWY10933.rev CAWY Helobdella robusta Subtracted ... 38 1.4 2
(EL676802) CBST8099.fwd NICHD_XGC_tropThy1 Xenopus (Silurana... 44 1.4 2
(CX507835) JGI_XZG52482.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.4 2
(AY792504) Dioscorea trifida clone MTI4 microsatellite seque... 32 1.4 3
(CX474244) JGI_XZG49257.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.4 2
(CX330966) JGI_XZT16733.fwd NIH_XGC_tropTad5 Xenopus (Silura... 44 1.4 2
(EY380365) CAXA2836.rev CAXA Helobdella robusta Subtracted L... 36 1.4 2
(CX472659) JGI_XZG5684.fwd NIH_XGC_tropGas7 Xenopus (Siluran... 44 1.4 2
(CX464997) JGI_XZG46786.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.4 2
(EL866942) CBXT20825.b1 NICHD_XGC_trop_25 Xenopus (Silurana)... 44 1.4 2
(FE236937) CAPG4132.fwd CAPG Naegleria gruberi amoeba stage ... 44 1.4 2
(CX500850) JGI_XZG31996.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.4 2
(CX313453) JGI_XZT9222.fwd NIH_XGC_tropTad5 Xenopus (Siluran... 44 1.4 2
(EY375547) CAXA15690.rev CAXA Helobdella robusta Subtracted ... 38 1.4 3
(CX426266) JGI_XZG13091.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.4 2
(CX396268) JGI_XZT56315.fwd NIH_XGC_tropTad5 Xenopus (Silura... 44 1.4 2
(CX464593) JGI_XZG46554.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.4 2
(CX423093) JGI_XZG63338.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.4 2
(CX337368) JGI_XZT19961.fwd NIH_XGC_tropTad5 Xenopus (Silura... 44 1.4 2
(CX509339) JGI_XZG35398.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.4 2
(CX450798) JGI_XZG23030.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.4 2
(CX425472) JGI_XZG12365.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.4 2
(FE263507) CAZO3298.fwd CAZO Naegleria gruberi Flagellate St... 44 1.5 2
(CX442190) JGI_XZG61009.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.5 2
(CX323070) JGI_XZT70772.fwd NIH_XGC_tropTad5 Xenopus (Silura... 44 1.5 2
(EL860080) CBXT16036.b1 NICHD_XGC_trop_25 Xenopus (Silurana)... 44 1.5 2
(CX442475) JGI_XZG61176.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.5 2
(CX344005) JGI_XZT23264.fwd NIH_XGC_tropTad5 Xenopus (Silura... 44 1.5 2
(CX466379) JGI_XZG47586.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.5 2
(DN024561) JGI_CAAR4724.fwd NIH_XGC_tropLiv1 Xenopus (Silura... 44 1.5 2
(CX450733) JGI_XZG22992.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.5 2
(CX442474) JGI_XZG61176.rev NIH_XGC_tropGas7 Xenopus (Silura... 44 1.5 2
(EY325201) CAWY10779.fwd CAWY Helobdella robusta Subtracted ... 40 1.5 2
(EY329085) CAWY2074.fwd CAWY Helobdella robusta Subtracted E... 40 1.5 2
(CX337475) JGI_XZT20427.fwd NIH_XGC_tropTad5 Xenopus (Silura... 44 1.5 2
(CX468794) JGI_XZG3421.fwd NIH_XGC_tropGas7 Xenopus (Siluran... 44 1.5 2
(CX442270) JGI_XZG61052.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.5 2
(CX425348) JGI_XZG12268.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.5 2
(CX513146) JGI_XZG57782.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.5 2
(DT390952) JGI_CABH8514.fwd NIH_XGC_tropSkeMus1 Xenopus (Sil... 44 1.5 2
(CX842349) JGI_CAAK10471.fwd NIH_XGC_tropBrn3 Xenopus (Silur... 44 1.5 2
(CX491998) JGI_XZG38528.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.5 2
(AP005683) Oryza sativa Japonica Group genomic DNA, chromoso... 38 1.5 3
(CX510864) JGI_XZG36306.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.5 2
(CX465173) JGI_XZG46891.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.5 2
(CX423393) JGI_XZG63513.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.6 2
(CX468763) JGI_XZG3404.fwd NIH_XGC_tropGas7 Xenopus (Siluran... 44 1.6 2
(DQ342053) Dictyostelium discoideum STIP mRNA, complete cds. 38 1.6 3
(CX504845) JGI_XZG41614.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.6 2
(CX470479) JGI_XZG4404.fwd NIH_XGC_tropGas7 Xenopus (Siluran... 44 1.6 2
(EY375422) CAXA15621.fwd CAXA Helobdella robusta Subtracted ... 36 1.6 2
(CX444307) JGI_XZG10312.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.6 2
(DT412999) JGI_CABI11675.fwd NIH_XGC_tropOvi1 Xenopus (Silur... 44 1.6 2
(CX426006) JGI_XZG12826.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.6 2
(CX436701) JGI_XZG59274.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.6 2
(CX497614) JGI_XZG43637.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.6 2
(EY381457) CAXA3475.fwd CAXA Helobdella robusta Subtracted L... 38 1.6 2
(CX493561) JGI_XZG39448.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.6 2
(CX498089) JGI_XZG43914.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.6 2
(CX469673) JGI_XZG3934.fwd NIH_XGC_tropGas7 Xenopus (Siluran... 44 1.6 2
(CX423337) JGI_XZG63479.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.6 2
(FE238386) CAPG4831.fwd CAPG Naegleria gruberi amoeba stage ... 44 1.6 2
(EY337222) CAWY8187.fwd CAWY Helobdella robusta Subtracted E... 40 1.6 2
(CX486067) JGI_XZG35148.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.6 2
(DN078358) JGI_CABD10881.fwd NIH_XGC_tropLun1 Xenopus (Silur... 44 1.6 2
(CX437552) JGI_XZG6124.fwd NIH_XGC_tropGas7 Xenopus (Siluran... 44 1.6 2
(CX885339) JGI_CAAL23370.fwd NIH_XGC_tropBrn4 Xenopus (Silur... 44 1.6 2
(CR376851) Zebrafish DNA sequence from clone DKEY-48N5 in li... 36 1.6 3
(AL034556) Plasmodium falciparum MAL3P5. 36 1.6 7
(CX481110) JGI_XZG3136.fwd NIH_XGC_tropGas7 Xenopus (Siluran... 44 1.6 2
(CX468371) JGI_XZG48755.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.6 2
(CX432006) JGI_XZG62513.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.6 2
(CX510447) JGI_XZG36061.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.6 2
(CX468323) JGI_XZG48730.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.6 2
(EY354719) CAWZ3362.fwd CAWZ Helobdella robusta Primary Late... 38 1.6 2
(AC159037) Pan troglodytes BAC clone CH251-277G20 from chrom... 40 1.6 4
(CX497367) JGI_XZG43495.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.6 2
(CX485460) JGI_XZG34798.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 1.6 2
(AY816749) Musca domestica latrophilin-like protein AD varia... 40 1.7 3
(AL969133) Xenopus tropicalis EST, clone TGas132f07 5'. 44 1.7 2
(AF362370) Dictyostelium discoideum histidine kinase DhkH (d... 38 1.7 2
(AC201652) Strongylocentrotus purpuratus clone R3-1015B17, W... 40 1.8 4
(EY377372) CAXA16685.rev CAXA Helobdella robusta Subtracted ... 38 1.9 3
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 38 1.9 4
(EA738493) Sequence 9939 from patent US 7368527. 38 1.9 3
(EA738495) Sequence 9941 from patent US 7368527. 38 1.9 3
(AC171647) Rhesus Macaque BAC CH250-482O21 (Children's Hosp... 40 2.1 3
(AC115604) Dictyostelium discoideum chromosome 2 map 4354771... 38 2.1 3
(CR376764) Zebrafish DNA sequence from clone CH211-259A10 in... 46 2.1 1
(CR318620) Zebrafish DNA sequence from clone DKEY-88N2 in li... 46 2.1 1
(BX663608) Zebrafish DNA sequence from clone DKEY-223I19 in ... 46 2.1 1
(EZ009606) TSA: Acropora millepora SeqIndex105160, mRNA sequ... 46 2.1 1
(BK006346) TPA_exp: Apis mellifera sex determination locus, ... 46 2.1 1
(AL611944) Mouse DNA sequence from clone RP23-279E14 on chro... 46 2.1 1
(AC123647) Mus musculus chromosome 3, clone RP23-105J10, com... 46 2.1 1
(AC109147) Mus musculus chromosome 8, clone RP23-341D16, com... 46 2.1 1
(AC197418) Macaca mulatta BAC CH250-211M21 (Children's Hosp... 46 2.1 1
(AC159435) Trypanosoma brucei chromosome 8 clone RPCI93-29H2... 46 2.1 1
(AC026100) Homo sapiens 3 BAC RP11-449F7 (Roswell Park Cance... 46 2.1 1
(AC005225) Homo sapiens PAC clone RP3-414A15 from 14q24.3, c... 46 2.1 1
(AC159684) Bos taurus clone CH240-51B17, WORKING DRAFT SEQUE... 46 2.1 1
(AC136825) Rattus norvegicus clone CH230-182B13, *** SEQUENC... 46 2.1 1
(AC134017) Rattus norvegicus clone CH230-473F8, *** SEQUENCI... 46 2.1 1
(AC118319) Rattus norvegicus clone CH230-138C15, WORKING DRA... 46 2.1 1
(AC112889) Rattus norvegicus clone CH230-223I1, *** SEQUENCI... 46 2.1 1
(AC112349) Rattus norvegicus clone CH230-336K24, *** SEQUENC... 46 2.1 1
(AC097120) Rattus norvegicus clone CH230-39E20, *** SEQUENCI... 46 2.1 1
(AC068855) Homo sapiens chromosome 3 clone RP11-723O18 map 3... 46 2.1 1
(AC224334) Bos taurus clone CH240-488D16, WORKING DRAFT SEQU... 46 2.1 1
(AC223124) Bos taurus clone CH240-428L16, WORKING DRAFT SEQU... 46 2.1 1
(AC186718) Ornithorhynchus anatinus clone OA_Bb-75C12, WORKI... 46 2.1 1
(AC182975) Bos taurus clone CH240-204E18, WORKING DRAFT SEQU... 46 2.1 1
(AC182223) Bos taurus clone CH240-399C19, WORKING DRAFT SEQU... 46 2.1 1
(AC171852) Bos taurus clone CH240-165M6, WORKING DRAFT SEQUE... 46 2.1 1
(AC170658) Bos taurus clone CH240-257N8, WORKING DRAFT SEQUE... 46 2.1 1
(AC169355) Bos taurus clone CH240-199D12, WORKING DRAFT SEQU... 46 2.1 1
(AC168458) Strongylocentrotus purpuratus clone R3-35J4, WORK... 46 2.1 1
(AZ607629) 1M0430K11F Mouse 10kb plasmid UUGC1M library Mus ... 46 2.1 1
(EJ388383) 1092963851034 Global-Ocean-Sampling_GS-28-01-01-1... 46 2.1 1
(EI395424) MUGQ_CH252P209F04T7_CN329_012 CHORI-252 Vervet Mo... 46 2.1 1
(AL229051) Tetraodon nigroviridis genome survey sequence T7 ... 46 2.1 1
(DE945721) Macropus eugenii DNA, BAC clone: MEB1-141N21_R, 3... 46 2.1 1
(CW862543) she2h87-68.g_004.ab1 Whole-genome shotgun library... 46 2.1 1
(CC256280) CH261-33H17_RM1.1 CH261 Gallus gallus genomic clo... 46 2.1 1
(BZ836142) CH240_204E18.TJ CHORI-240 Bos taurus genomic clon... 46 2.1 1
(AG057902) Pan troglodytes DNA, clone: PTB-044K02.R. 46 2.1 1
(ES220010) MpGnorm_ag5_G09 Myzus persicae, tobacco lineage, ... 46 2.1 1
(EE878558) sp_c17_90 Sweetpotato cDNA library C Ipomoea bata... 46 2.1 1
(EE262268) B04_B04fm2m8_pDNRf_521220 Myzus persicae, line F0... 46 2.1 1
(EE061502) zf_eli48_F11 Embryonic library Taeniopygia guttat... 46 2.1 1
(EE060886) zf_eli34_A07 Embryonic library Taeniopygia guttat... 46 2.1 1
(EE060118) zf_eli20_B04 Embryonic library Taeniopygia guttat... 46 2.1 1
(EE060107) zf_eli20_D02 Embryonic library Taeniopygia guttat... 46 2.1 1
(EE051307) zf_yg3k_16_H5 Developmental library I Taeniopygia... 46 2.1 1
(DT357449) JGI_CABY749.fwd CABY Pimephales promelas 2-14 day... 46 2.1 1
(DT339170) JBW094E10.b_072.abi Pineapple week 5-10 nematode-... 46 2.1 1
(DR983482) JGI_AOKF1144.rev AOKF Acropora palmata spawned eg... 46 2.1 1
(AM761622) Oopsacas minuta EST, 5' end sequence, clone IL0AF... 46 2.1 1
(CV243330) WS02518.B21_J01 PT-MB-N-A-15 Populus trichocarpa ... 46 2.1 1
(CK307286) SB02043A1G12.f1 normalized Keck-Tagu Library SB02... 46 2.1 1
(CK305451) SB02029A2B04.f1 normalized Keck-Tagu Library SB02... 46 2.1 1
(CK303948) SB02022A1E03.f1 normalized Keck-Tagu Library SB02... 46 2.1 1
(CB466157) 728244 MARC 6BOV Bos taurus cDNA 5', mRNA sequence. 46 2.1 1
(C93293) Dictyostelium discoideum slug cDNA, clone SSM534. 46 2.1 1
(C23844) Dictyostelium discoideum gamete cDNA, clone FCL-AC22. 46 2.1 1
(BU907880) AGENCOURT_10481666 NICHD_XGC_Emb1 Xenopus laevis ... 46 2.1 1
(BJ430918) Dictyostelium discoideum cDNA clone:ddv9c11, 3' e... 46 2.1 1
(BI664027) 603289327F1 NCI_CGAP_Mam6 Mus musculus cDNA clone... 46 2.1 1
(FF635716) G825P573RG11.T0 Acorn worm normalized gastrula pE... 46 2.1 1
(FE736729) SB06022B2C03.f1 Normalized subtracted Keck-Tagu L... 46 2.1 1
(FE643280) CBYZ4594.b1 CBYZ Panicum virgatum Kanlow 4 day ol... 46 2.1 1
(EX440342) GQ04013.B7_A17 GQ040 - Shoot tip - Active growth ... 46 2.1 1
(ES543451) Kr_K06_02L10_attB1_seq K06 Euphausia superba cDNA... 46 2.1 1
(ES543338) Kr_K06_02F24_attB1_seq K06 Euphausia superba cDNA... 46 2.1 1
(AA080345) mn87c01.r1 Stratagene mouse Tcell 937311 Mus musc... 46 2.1 1
(DQ088147) Mycoplasma hyopneumoniae F7.2C P146 adhesin like-... 46 2.1 1
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 36 2.1 3
(AU061013) Dictyostelium discoideum slug cDNA, clone SLC619. 36 2.1 2
(EY392662) CAXA9929.rev CAXA Helobdella robusta Subtracted L... 38 2.1 3
(AC178716) Strongylocentrotus purpuratus clone R3-3005M5, WO... 42 2.1 4
(AC165149) Mus musculus BAC clone RP24-114C10 from chromosom... 40 2.1 4
(AC176622) Strongylocentrotus purpuratus clone R3-3080B07, W... 36 2.2 5
(CU571333) Zebrafish DNA sequence from clone CH73-64E16 in l... 36 2.2 4
(AC155497) Zea mays strain B73 clone ZMMBBc0027E13, *** SEQU... 36 2.2 4
(BX908786) Zebrafish DNA sequence from clone CH211-13O8 in l... 36 2.3 4
(AC178433) Strongylocentrotus purpuratus clone R3-1117P5, WO... 34 2.3 6
(AL844501) Plasmodium falciparum strain 3D7, chromosome 1. 36 2.3 7
(AC113983) Mus musculus chromosome 5, clone RP24-95M11, comp... 38 2.4 5
(BJ354495) Dictyostelium discoideum cDNA clone:dda53e23, 3' ... 30 2.4 3
(AF134252) Candida albicans Ras homolog type B gene, complet... 38 2.4 2
(AC168334) Strongylocentrotus purpuratus clone R3-58O22, WOR... 34 2.5 6
(X16524) Dictyostelium discoiedeum AAC-rich mRNA (AAC3). 40 2.5 2
(AC106886) Homo sapiens chromosome 16 clone RP11-2C24, compl... 40 2.6 4
(AJ012088) Dictyostelium discoideum mRNA for microtubule-ass... 40 2.6 2
(C91542) Dictyostelium discoideum slug cDNA, clone SSK417. 30 2.6 3
(AC191198) Atelerix albiventris clone LB4-136B13, WORKING DR... 40 2.8 5
(CV752004) SJL6-005_H03_SJL6-005H03-T7_030.ab1 SJL Schistoso... 38 2.8 2
(AF134251) Candida albicans Ras homolog type A gene, complet... 38 2.9 2
(FP102937) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 3.0 3
(AC108888) Bos taurus clone RP42-191H12, WORKING DRAFT SEQUE... 42 3.1 3
(BJ359462) Dictyostelium discoideum cDNA clone:ddc14j22, 5' ... 32 3.1 3
(AC214851) Pan troglodytes BAC clone CH251-640N3 from chromo... 40 3.2 4
(AC179185) Strongylocentrotus purpuratus clone R3-4019D04, W... 34 3.2 4
(AU262919) Dictyostelium discoideum vegetative cDNA clone:VS... 30 3.2 3
(AC020967) Mus musculus chromosome 18 clone RP23-161O8, comp... 38 3.2 4
(CR812469) Zebrafish DNA sequence from clone DKEY-286F3 in l... 34 3.2 8
(AC116920) Dictyostelium discoideum chromosome 2 map 4415041... 38 3.2 5
(AC201513) Strongylocentrotus purpuratus clone R3-3085H12, W... 42 3.2 3
(AL844506) Plasmodium falciparum chromosome 7. 44 3.2 5
(C84849) Dictyostelium discoideum slug cDNA, clone SSG781. 36 3.3 2
(BX322575) Zebrafish DNA sequence from clone CH211-283E2 in ... 44 3.3 2
(AB081952) Spinacia oleracea Spwrky-1 mRNA for WRKY transcri... 36 3.3 2
(BX005463) Zebrafish DNA sequence from clone CH211-177H19 in... 38 3.3 3
(AU284861) Dictyostelium discoideum gamete cDNA clone:FC-BN1... 30 3.3 3
(AC232046) Solanum tuberosum chromosome 1 clone RH069C09, **... 36 3.4 5
(AZ352840) 1M0091B01R Mouse 10kb plasmid UUGC1M library Mus ... 42 3.4 2
(BJ358782) Dictyostelium discoideum cDNA clone:ddc11h12, 5' ... 36 3.4 2
(AM440839) Vitis vinifera contig VV78X199190.7, whole genome... 38 3.5 2
(BX936386) Zebrafish DNA sequence from clone CH211-232P21 in... 40 3.5 2
(AU039145) Dictyostelium discoideum slug cDNA, clone SSM443. 36 3.5 2
(CR855787) Xenopus tropicalis finished cDNA, clone TGas062k23. 44 3.6 2
(CU525306) H.melpomene DNA sequence from clone AEHM-13H8. 36 3.6 5
(AL732538) Mouse DNA sequence from clone RP23-242O9 on chrom... 38 3.6 3
(AC172404) Strongylocentrotus purpuratus clone R3-14C8, WORK... 38 3.6 5
(CU463252) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 3.7 2
(AC139993) Mus musculus chromosome 12, clone RP23-67O10, com... 40 3.7 4
(BX649458) Zebrafish DNA sequence from clone DKEY-14P20 in l... 36 3.7 4
(BC064864) Xenopus tropicalis hypothetical protein MGC76086,... 44 3.7 2
(CT808578) Paramecium tetraurelia 5-PRIME EST from clone LK0... 42 3.7 2
(AF177670) Candida albicans Ras1p (RAS1) gene, complete cds. 38 3.7 2
(FP102323) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 3.7 2
(AC210423) Homo sapiens FOSMID clone ABC10-44660300P12 from ... 40 3.8 3
(AL480507) T. brucei sheared genomic DNA clone 225g08, rever... 40 3.8 2
(AF004387) Helobdella robusta LOX5 (Lox5) mRNA, partial cds. 38 3.8 2
(G31345) UNH-007 Tilapia (fish) Oreochromis niloticus STS ge... 38 3.9 2
(CQ436175) Sequence 1935 from Patent WO0192523. 36 3.9 2
(AC115581) Dictyostelium discoideum chromosome 2 map complem... 36 3.9 4
(AC199869) Monosiga brevicollis clone JGIACYI-81O7, complete... 38 3.9 2
(DN773754) E1509 [C2181|cld23_f09] Cold Library Thellungiell... 38 4.0 2
(AU060777) Dictyostelium discoideum slug cDNA, clone SLB459. 34 4.0 2
(AC180333) Strongylocentrotus purpuratus clone R3-3118K19, W... 34 4.1 6
(AE014825) Plasmodium falciparum 3D7 chromosome 14 section 1... 34 4.1 6
(BJ323411) Dictyostelium discoideum cDNA clone:dda10a13, 5' ... 40 4.1 2
(AP001449) Homo sapiens genomic DNA, chromosome 18q22 clone:... 34 4.1 7
(BJ339372) Dictyostelium discoideum cDNA clone:dda65i01, 5' ... 38 4.1 2
(AC175935) Strongylocentrotus purpuratus clone R3-17A14, WOR... 42 4.1 4
(AC169600) Bos taurus clone CH240-210B4, WORKING DRAFT SEQUE... 42 4.1 3
(AL050336) Human DNA sequence from clone RP3-447E21 on chrom... 32 4.1 2
(BJ323752) Dictyostelium discoideum cDNA clone:dda12h02, 5' ... 40 4.1 2
(AL591672) Zebrafish DNA sequence from clone BUSM1-167H12 in... 36 4.2 4
(EX856161) CBNF3300.fwd CBNF Phycomyces blakesleeanus NRRL15... 30 4.2 3
(AU039002) Dictyostelium discoideum slug cDNA, clone SSM260. 40 4.2 2
(AE014834) Plasmodium falciparum 3D7 chromosome 10 section 6... 38 4.3 6
(AZ352364) 1M0090K20R Mouse 10kb plasmid UUGC1M library Mus ... 42 4.3 2
(AL357057) Human DNA sequence from clone RP11-802N13 on chro... 32 4.3 2
(AC180241) Strongylocentrotus purpuratus clone R3-3008G11, W... 42 4.4 3
(BJ332631) Dictyostelium discoideum cDNA clone:dda39e19, 5' ... 38 4.4 2
(BJ367184) Dictyostelium discoideum cDNA clone:ddc41o15, 5' ... 38 4.5 2
(BJ337340) Dictyostelium discoideum cDNA clone:dda57h03, 5' ... 38 4.5 2
(BX730012) Xenopus tropicalis EST, clone TTpA025h09 5'. 42 4.5 2
(BJ394571) Dictyostelium discoideum cDNA clone:dds35n13, 5' ... 38 4.5 2
(BJ334640) Dictyostelium discoideum cDNA clone:dda47c09, 5' ... 38 4.6 2
(EY310308) CAWX22077.rev CAWX Helobdella robusta Primary Ear... 40 4.6 2
(DY892173) CeleSEQ9127 Cunninghamella elegans pBluescript (E... 38 4.6 2
(BJ336344) Dictyostelium discoideum cDNA clone:dda53g15, 5' ... 38 4.6 2
(X99669) Dictyostelium discoideum mRNA for dynamin homologue. 38 4.6 2
(AC095809) Rattus norvegicus clone CH230-10H1, *** SEQUENCIN... 38 4.6 4
(AC179690) Strongylocentrotus purpuratus clone R3-1021L6, WO... 38 4.6 4
(AM449905) Vitis vinifera contig VV78X217454.50, whole genom... 40 4.7 4
(BX511183) Zebrafish DNA sequence from clone CH211-51F18 in ... 36 4.7 9
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 38 4.7 4
(AY160094) Dictyostelium discoideum nucleotide exchange fact... 34 4.7 3
(EY388804) CAXA7502.rev CAXA Helobdella robusta Subtracted L... 36 4.8 2
(AJ002383) Dictyostelium discoideum mybB gene. 32 4.8 3
(EY365395) CAXA10163.fwd CAXA Helobdella robusta Subtracted ... 40 4.8 2
(DH734711) Rattus norvegicus DNA, BAC clone: RNB1-306N01, 3'... 38 4.9 2
(AU061335) Dictyostelium discoideum slug cDNA, clone SLD779. 38 4.9 2
(AU061460) Dictyostelium discoideum slug cDNA, clone SLE340. 38 4.9 2
(ED635809) GM_WBa0042E21.f GM_WBa Glycine max genomic clone ... 40 4.9 2
(AC136990) Homo sapiens chromosome 8 clone CTD-2573F2 map 8,... 38 5.0 3
(DB914934) Idiosepius paradoxus cDNA, clone:Ip_aB_017_M24, 5... 34 5.0 3
(FE765525) CCAG2695.b7 CCAG Petrolisthes cinctipes heart, gi... 38 5.0 2
(EB556851) AGENCOURT_51357205 D. virilis EST Drosophila viri... 36 5.0 2
(FE809159) CCAG28426.b1 CCAG Petrolisthes cinctipes heart, g... 38 5.0 2
(AC112439) Rattus norvegicus clone CH230-147A20, *** SEQUENC... 38 5.0 4
(CR385085) Zebrafish DNA sequence from clone CH211-195A16 in... 38 5.1 3
(FE800366) CCAG23183.b1 CCAG Petrolisthes cinctipes heart, g... 38 5.1 2
(CR812484) Zebrafish DNA sequence from clone DKEY-83B16 in l... 34 5.1 6
(BX204766) Danio rerio genomic clone DKEY-217H16, genomic su... 40 5.1 2
(AU060868) Dictyostelium discoideum slug cDNA, clone SLB802. 38 5.2 2
(AC125007) Mus musculus chromosome 3, clone RP24-190F20, com... 42 5.2 6
(AY159038) Dictyostelium discoideum LvsB (lvsB) gene, comple... 40 5.2 2
(FE784204) CCAG13681.b3 CCAG Petrolisthes cinctipes heart, g... 38 5.2 2
(AC111187) Homo sapiens chromosome 11 clone RP11-384C21 map ... 42 5.4 2
(AC176935) Strongylocentrotus purpuratus clone R3-1104F12, W... 36 5.4 4
(DY373914) ZO__Ef0008I05.f ZO__Ef Zingiber officinale cDNA c... 32 5.4 2
(DY373915) ZO__Ef0008I05.r ZO__Ef Zingiber officinale cDNA c... 32 5.4 2
(EY383727) CAXA476.fwd CAXA Helobdella robusta Subtracted La... 38 5.4 2
(FG247080) CBYB4735.b1 CBYB Cercospora zeae-maydis cercospor... 32 5.4 2
(GD236757) G1045P366RL10.T1 Aplysia californica Pooled Norma... 38 5.5 2
(EL353117) CCEL9749.b1_J13.ab1 CCE(LMS) endive Cichorium end... 36 5.5 2
(EY351335) CAWZ18066.fwd CAWZ Helobdella robusta Primary Lat... 36 5.6 2
(AJ581661) Dictyostelium discoideum partial dstB gene for Dd... 38 5.6 2
(EY335103) CAWY6805.fwd CAWY Helobdella robusta Subtracted E... 38 5.7 2
(FE235484) CAPG3385.fwd CAPG Naegleria gruberi amoeba stage ... 38 5.7 2
(FM135973) Rattus norvegicus EST, 3'-end sequence, clone etn... 40 5.7 2
(EI458826) PV_GBa0061H21.r PV_GBa Phaseolus vulgaris genomic... 36 5.7 2
(AC137572) Homo sapiens chromosome 17 clone RP13-949G16 map ... 40 5.7 2
(FE237753) CAPG4524.fwd CAPG Naegleria gruberi amoeba stage ... 38 5.7 2
(AL157831) Human DNA sequence from clone RP11-108B14 on chro... 42 5.7 4
(DY893373) CeleSEQ12697 Cunninghamella elegans pBluescript (... 38 5.8 2
(CV674530) RET7SJ_27H06.T7 Schistosoma japonicum reverse cDN... 38 5.9 2

>(AC117075) Dictyostelium discoideum chromosome 2 map 5201047-5455781
strain AX4, complete sequence.
Length = 254733

Score = 551 bits (278), Expect(4) = 0.0
Identities = 278/278 (100%)
Strand = Plus / Plus


Query: 138 ttaaatataaatagttaaatgcaaaacaattatagaaatagtggtaatggtagtggtgga 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196194 ttaaatataaatagttaaatgcaaaacaattatagaaatagtggtaatggtagtggtgga 196253


Query: 198 caacagcaacaacaacaaattataacgataacaataccaagagattataaagatattgta 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196254 caacagcaacaacaacaaattataacgataacaataccaagagattataaagatattgta 196313


Query: 258 acgaaatttgaaagacaatcattcccagatgaattatcaaggaatggtgttagtttagtt 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196314 acgaaatttgaaagacaatcattcccagatgaattatcaaggaatggtgttagtttagtt 196373


Query: 318 gaatttgaattcacaataaatgaaattaatagaatattacaaaaagcagaaactatcgat 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196374 gaatttgaattcacaataaatgaaattaatagaatattacaaaaagcagaaactatcgat 196433


Query: 378 tcaaccactgtcattgaagaaatcattggttgtttaac 415
||||||||||||||||||||||||||||||||||||||
Sbjct: 196434 tcaaccactgtcattgaagaaatcattggttgtttaac 196471

Score = 389 bits (196), Expect(4) = 0.0
Identities = 196/196 (100%)
Strand = Plus / Plus


Query: 510 caatcatcaccatttagatctagattgaatttagaggaaaaagatgttttaaaaccagag 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196943 caatcatcaccatttagatctagattgaatttagaggaaaaagatgttttaaaaccagag 197002


Query: 570 actataataaatgttgttacaaatagtagtattgtagagttatcagatgaagaggatgaa 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197003 actataataaatgttgttacaaatagtagtattgtagagttatcagatgaagaggatgaa 197062


Query: 630 gatgatgcaaacgatgaaagtaatctatcttttaataataataatagtggtgatcatggt 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197063 gatgatgcaaacgatgaaagtaatctatcttttaataataataatagtggtgatcatggt 197122


Query: 690 ggttcaagtagtagag 705
||||||||||||||||
Sbjct: 197123 ggttcaagtagtagag 197138

Score = 44.1 bits (22), Expect(4) = 0.0
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 1 ccaacaataaccaattttcaag 22
||||||||||||||||||||||
Sbjct: 196056 ccaacaataaccaattttcaag 196077

Score = 36.2 bits (18), Expect(4) = 0.0
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 441 gatgataaatataaaaag 458
||||||||||||||||||
Sbjct: 196497 gatgataaatataaaaag 196514

Score = 38.2 bits (19), Expect(4) = 0.41
Identities = 22/23 (95%)
Strand = Plus / Plus


Query: 174 aatagtggtaatggtagtggtgg 196
|||||||||| ||||||||||||
Sbjct: 115649 aatagtggtagtggtagtggtgg 115671

Score = 36.2 bits (18), Expect(4) = 0.41
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 197 acaacagcaacaacaacaaatt 218
|||||| |||||||||||||||
Sbjct: 128813 acaacaacaacaacaacaaatt 128834

Score = 32.2 bits (16), Expect(4) = 0.41
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 344 taatagaatattacaaaaag 363
||||| ||||||||||||||
Sbjct: 237503 taatataatattacaaaaag 237522

Score = 30.2 bits (15), Expect(4) = 0.41
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 661 ttaataataataata 675
|||||||||||||||
Sbjct: 239853 ttaataataataata 239867

Score = 36.2 bits (18), Expect(3) = 6.9
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 198 caacagcaacaacaacaa 215
||||||||||||||||||
Sbjct: 159986 caacagcaacaacaacaa 160003

Score = 36.2 bits (18), Expect(3) = 6.9
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 652 atctatcttttaataata 669
||||||||||||||||||
Sbjct: 216508 atctatcttttaataata 216525

Score = 32.2 bits (16), Expect(3) = 6.9
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 179 tggtaatggtagtggt 194
||||||||||||||||
Sbjct: 114163 tggtaatggtagtggt 114178

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 734,546,865
Number of extensions: 56688757
Number of successful extensions: 9473097
Number of sequences better than 10.0: 1198
Length of query: 821
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 797
Effective length of database: 99,340,224,878
Effective search space: 79174159227766
Effective search space used: 79174159227766
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.18
Homology vs Protein
Query= Contig-U01723-1 (Contig-U01723-1Q) /CSM_Contig/Contig-U01723-1Q.Seq.d
(821 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC117075_73(AC117075|pid:none) Dictyostelium discoideum chromoso... 162 9e-39
AY814131_1(AY814131|pid:none) Schistosoma japonicum SJCHGC03322 ... 46 0.002
BC153595_1(BC153595|pid:none) Danio rerio zgc:86753, mRNA (cDNA ... 45 0.003
BC092359_1(BC092359|pid:none) Danio rerio zgc:110549, mRNA (cDNA... 45 0.003
BC071425_1(BC071425|pid:none) Danio rerio zgc:86753, mRNA (cDNA ... 44 0.006
AF068291_1(AF068291|pid:none) Homo sapiens HDCKB03P mRNA, partia... 44 0.006
BC083023_1(BC083023|pid:none) Xenopus laevis hypothetical LOC494... 44 0.008
(Q6AYQ1) RecName: Full=Golgin subfamily A member 7; &BC078959_1... 44 0.008
(Q91W53) RecName: Full=Golgin subfamily A member 7; &AK048175_1... 43 0.011
BC001227_1(BC001227|pid:none) Homo sapiens golgi autoantigen, go... 43 0.011
(Q5ZLC9) RecName: Full=Golgin subfamily A member 7; &AJ719805_1... 43 0.011
BT082270_1(BT082270|pid:none) Anoplopoma fimbria clone afim-evh-... 43 0.011
BC072742_1(BC072742|pid:none) Xenopus laevis MGC79092 protein, m... 42 0.018
BT048028_1(BT048028|pid:none) Salmo salar clone ssal-evf-551-300... 42 0.024
FN357313_19(FN357313|pid:none) Schistosoma mansoni genome sequen... 42 0.031
BX005216_2(BX005216|pid:none) Zebrafish DNA sequence from clone ... 42 0.031
BC122697_1(BC122697|pid:none) Bos taurus golgi autoantigen, golg... 39 0.16
T27243(T27243)hypothetical protein Y57G11C.33 - Caenorhabditis e... 39 0.20
Z99281_4(Z99281|pid:none) Caenorhabditis elegans YAC Y57G11C, co... 39 0.20
AF125102_1(AF125102|pid:none) Homo sapiens HSPC041 protein mRNA,... 39 0.27
BT078336_1(BT078336|pid:none) Lepeophtheirus salmonis Pacific fo... 39 0.27
BC110810_1(BC110810|pid:none) Homo sapiens golgi autoantigen, go... 37 1.0
CP000312_302(CP000312|pid:none) Clostridium perfringens SM101, c... 35 2.9
AC116986_58(AC116986|pid:none) Dictyostelium discoideum chromoso... 34 6.6
AE009951_1524(AE009951|pid:none) Fusobacterium nucleatum subsp. ... 33 8.6

>AC117075_73(AC117075|pid:none) Dictyostelium discoideum chromosome
2 map 5201047-5455781 strain AX4, complete sequence.
Length = 284

Score = 162 bits (411), Expect = 9e-39
Identities = 83/103 (80%), Positives = 83/103 (80%)
Frame = +3

Query: 156 MQNNYRXXXXXXXXXXXXXXXXXXXXPRDYKDIVTKFERQSFPDELSRNGVSLVEFEFTI 335
MQNNYR PRDYKDIVTKFERQSFPDELSRNGVSLVEFEFTI
Sbjct: 1 MQNNYRNSGNGSGGQQQQQQIITITIPRDYKDIVTKFERQSFPDELSRNGVSLVEFEFTI 60

Query: 336 NEINRILQKAETIDSTTVIEEIIGCLTFFSIFLFYDDKYKKCI 464
NEINRILQKAETIDSTTVIEEIIGCLTFFSIFLFYDDKYKKCI
Sbjct: 61 NEINRILQKAETIDSTTVIEEIIGCLTFFSIFLFYDDKYKKCI 103

Score = 59.7 bits (143), Expect = 1e-07
Identities = 36/72 (50%), Positives = 36/72 (50%)
Frame = +3

Query: 507 IQSSPFRSRLNLEEKDVLKPETIINVVTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 686
IQSSPFRSRLNLEEKDVLKPETIINVVTN
Sbjct: 213 IQSSPFRSRLNLEEKDVLKPETIINVVTNSSIVELSDEEDEDDANDESNLSFNNNNSGDH 272

Query: 687 XXXXXRDINNSG 722
RDINNSG
Sbjct: 273 GGSSSRDINNSG 284

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 531,906,393
Number of extensions: 5639642
Number of successful extensions: 14592
Number of sequences better than 10.0: 25
Number of HSP's gapped: 14589
Number of HSP's successfully gapped: 26
Length of query: 273
Length of database: 1,051,180,864
Length adjustment: 127
Effective length of query: 146
Effective length of database: 640,137,871
Effective search space: 93460129166
Effective search space used: 93460129166
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.86 gvh: 0.20 alm: 0.28 top: 0.80 tms: 0.07 mit: 0.34 mip: 0.02
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 1.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

52.0 %: nuclear
28.0 %: cytoplasmic
8.0 %: mitochondrial
8.0 %: Golgi
4.0 %: vesicles of secretory system

>> prediction for Contig-U01723-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 2
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0