| Contig-U10963-1 |
| Contig ID |
Contig-U10963-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
2686 |
| Chromosome number (1..6, M) |
2 |
| Chromosome length |
8467578 |
| Start point |
6083787 |
| End point |
6082150 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
15 |
| Number of EST |
22 |
| Link to clone list |
U10963 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.22 |
| Homology vs DNA |
Query= Contig-U10963-1 (Contig-U10963-1Q) /CSM_Contig/Contig-U10963-1Q.Seq.d
(2696 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AC114258) Dictyostelium discoideum chromosome 2 map complem... 1582 0.0 1
(AU061954) Dictyostelium discoideum slug cDNA, clone SLG765. 1279 0.0 1
(BJ413885) Dictyostelium discoideum cDNA clone:ddv17d12, 5' ... 1138 0.0 1
(AU060970) Dictyostelium discoideum slug cDNA, clone SLC428. 1134 0.0 1
(BJ362131) Dictyostelium discoideum cDNA clone:ddc20l12, 5' ... 1092 0.0 1
(BJ360743) Dictyostelium discoideum cDNA clone:ddc7l16, 5' e... 1092 0.0 1
(BJ359017) Dictyostelium discoideum cDNA clone:ddc12o09, 5' ... 1092 0.0 1
(BJ353312) Dictyostelium discoideum cDNA clone:dda49o18, 3' ... 1053 0.0 2
(BJ372390) Dictyostelium discoideum cDNA clone:ddc12o09, 3' ... 1025 0.0 1
(BJ431998) Dictyostelium discoideum cDNA clone:ddv17d12, 3' ... 932 0.0 2
(BJ373042) Dictyostelium discoideum cDNA clone:ddc15a14, 3' ... 904 0.0 2
(BJ352037) Dictyostelium discoideum cDNA clone:dda45n09, 3' ... 896 0.0 2
(BJ434444) Dictyostelium discoideum cDNA clone:ddv16j24, 3' ... 890 0.0 2
(BJ402633) Dictyostelium discoideum cDNA clone:dds17e18, 3' ... 880 0.0 2
(AU039926) Dictyostelium discoideum slug cDNA, clone SLG765. 850 0.0 2
(BJ347724) Dictyostelium discoideum cDNA clone:dda27p23, 3' ... 779 0.0 2
(BJ344362) Dictyostelium discoideum cDNA clone:dda19c01, 3' ... 763 0.0 4
(BJ346547) Dictyostelium discoideum cDNA clone:dda24d12, 3' ... 716 0.0 3
(BJ375885) Dictyostelium discoideum cDNA clone:ddc20l12, 3' ... 533 0.0 3
(BJ329241) Dictyostelium discoideum cDNA clone:dda24d12, 5' ... 944 0.0 2
(BJ359587) Dictyostelium discoideum cDNA clone:ddc15a14, 5' ... 973 0.0 1
(BJ413763) Dictyostelium discoideum cDNA clone:ddv16j24, 5' ... 971 0.0 2
(BJ335305) Dictyostelium discoideum cDNA clone:dda49o18, 5' ... 971 0.0 1
(BJ334184) Dictyostelium discoideum cDNA clone:dda45n09, 5' ... 971 0.0 1
(BJ330275) Dictyostelium discoideum cDNA clone:dda27p23, 5' ... 932 0.0 1
(BJ431974) Dictyostelium discoideum cDNA clone:ddv17p01, 3' ... 482 0.0 2
(C83960) Dictyostelium discoideum slug cDNA, clone SLA589. 525 0.0 3
(BJ374402) Dictyostelium discoideum cDNA clone:ddc7l16, 3' e... 361 0.0 4
(BJ431975) Dictyostelium discoideum cDNA clone:ddv17p02, 3' ... 315 0.0 5
(AU034271) Dictyostelium discoideum slug cDNA, clone SLC428. 430 e-115 1
(DY886205) CeleSEQ1764 Cunninghamella elegans pBluescript (E... 54 4e-32 9
(DY886884) CeleSEQ2707 Cunninghamella elegans pBluescript (E... 54 4e-30 9
(DY892593) CeleSEQ11167 Cunninghamella elegans pBluescript (... 54 3e-29 8
(DY890620) CeleSEQ9692 Cunninghamella elegans pBluescript (E... 54 4e-26 8
(DY891731) CeleSEQ8381 Cunninghamella elegans pBluescript (E... 54 7e-18 6
(CF703213) CCAIC74TR C.neoformans strain JEC21 Cryptococcus ... 48 7e-16 6
(EH630202) EST1309 LK04 Laupala kohalensis cDNA clone 106102... 64 4e-14 2
(FC818276) Sr_pAMT7_011h20_T7 S. ratti mixed stage pAMP Stro... 48 7e-12 4
(EH634761) EST5869 LK04 Laupala kohalensis cDNA clone 106102... 56 8e-12 2
(EH640650) EST11758 LK04 Laupala kohalensis cDNA clone 10610... 56 8e-12 2
(EH217694) USDA-FP_180493 WHMH (pink hibiscus mealybug) Maco... 58 2e-11 3
(AF386797) Entamoeba histolytica signal recognition particle... 64 2e-10 4
(FC817816) Sr_pAMT7_09p23_T7 S. ratti mixed stage pAMP Stron... 48 3e-10 3
(CF690156) CCAE228TR C.neoformans strain JEC21 Cryptococcus ... 44 6e-10 5
(AC208374) Populus trichocarpa clone JGIACSB249-H10, complet... 42 9e-10 9
(EL574644) Physarum11995 Physarum polycephalum starvation st... 50 1e-09 4
(AY068301) Schmidtea mediterranea clone H.44.7a(T3) unknown ... 64 1e-09 2
(DY891741) CeleSEQ8396 Cunninghamella elegans pBluescript (E... 54 2e-09 5
(AY967540) Schmidtea mediterranea clone HE.4.05E mRNA sequence. 64 3e-09 2
(EF147818) Populus trichocarpa clone WS0125_D17 unknown mRNA. 42 3e-09 5
(BW635064) Dugesia ryukyuensis mRNA, clone: Dr_sW_001_D12, 5... 46 5e-09 4
(AE017345) Cryptococcus neoformans var. neoformans JEC21 chr... 76 8e-09 1
(EL577770) Physarum11996 Physarum polycephalum starvation st... 52 1e-08 2
(AX489205) Sequence 6505 from Patent WO02053728. 38 2e-08 6
(BH149189) ENTPK96TF Entamoeba histolytica Sheared DNA Entam... 64 2e-08 3
(AJ222805) Candida albicans mRNA for SRP54 protein homologue. 38 2e-08 6
(CF722220) CCAHA83TR C.neoformans strain JEC21 Cryptococcus ... 44 3e-08 5
(FE422550) CBTX3388.fwd CBTX_Daphnia_pulex_Chosen_One_Librar... 44 2e-07 3
(FE347825) CBIB7442.fwd CBIB_Daphnia_pulex_Chosen_One_Librar... 44 2e-07 3
(FE376160) CBNS1098.fwd CBNS_Daphnia_pulex_Chosen_One_Librar... 44 2e-07 3
(DY889298) CeleSEQ10755 Cunninghamella elegans pBluescript (... 54 3e-07 3
(CV281570) WS0182.B21_E13 PTxD-IL-N-A-9 Populus trichocarpa ... 40 1e-06 5
(AL437274) T3 end of clone BC0AA008D03 of library BC0AA from... 42 1e-06 4
(DT481825) WS02533.BR_A21 PT-MB-N-A-15 Populus trichocarpa c... 40 2e-06 5
(AZ529841) ENTCO84TR Entamoeba histolytica Sheared DNA Entam... 64 2e-06 2
(CA923487) MTU7CL.P11.B03 Aspen leaf cDNA Library Populus tr... 42 2e-06 4
(AZ682189) ENTKB30TF Entamoeba histolytica Sheared DNA Entam... 64 2e-06 2
(BH147501) ENTQA18TF Entamoeba histolytica Sheared DNA Entam... 64 2e-06 2
(EY018730) CBAB2261.b1:P T. versicolor self root extracts re... 36 2e-06 5
(EV550881) RR3B054TF RR3(NY) Raphanus raphanistrum subsp. ra... 38 2e-06 4
(EV546080) RR3B054JQ RR3(NY) Raphanus raphanistrum subsp. ra... 38 3e-06 4
(CR382124) Kluyveromyces lactis strain NRRL Y-1140 chromosom... 60 4e-06 22
(EY019098) CBAB2488.g1:P T. versicolor self root extracts re... 34 5e-06 5
(CA923989) MTU7CL.P17.D10 Aspen leaf cDNA Library Populus tr... 42 5e-06 4
(C24328) Dictyostelium discoideum gamete cDNA, clone FC-AR09. 36 7e-06 5
(BJ327067) Dictyostelium discoideum cDNA clone:dda19c01, 5' ... 66 7e-06 1
(Z34527) L.esculentum (UC82-B) mRNA for 54-kD signal recogni... 34 1e-05 6
(FE851031) CAFP1499.fwd CAFP Pichia stipitis aerobic xylose ... 52 1e-05 3
(EY018731) CBAB2261.g1:P T. versicolor self root extracts re... 34 2e-05 5
(CR380957) Candida glabrata strain CBS138 chromosome K compl... 52 2e-05 2
(EX330478) GQ02901.B7_O22 GQ029 - Xylem scrapings - AT NITE ... 44 3e-05 4
(ES927046) 26RDBNT_UP_087_B10_04MAR2006_078 Brassica napus 2... 38 5e-05 3
(DQ332704) Synthetic construct Saccharomyces cerevisiae clon... 48 5e-05 3
(AX829600) Sequence 320 from Patent WO03072602. 48 5e-05 3
(AX818570) Sequence 320 from Patent EP1338608. 48 5e-05 3
(AX594724) Sequence 378 from Patent EP1258494. 48 5e-05 3
(EV004300) BNAEN3GH_UP_166_F01_11NOV2006_005 Brassica napus ... 38 5e-05 3
(X51614) S.cerevisiae DNA for SRP54. 48 7e-05 3
(M55517) Saccharomyces cerevisiae signal recognition particl... 48 7e-05 3
(FF757026) XABT64202.fwd Gateway compatible cien cDNA librar... 46 8e-05 4
(EX751469) RR1BX96JQ RR1(CS) Raphanus raphanistrum subsp. ma... 38 1e-04 5
(CF686636) CCABL64TR C.neoformans strain JEC21 Cryptococcus ... 44 1e-04 4
(CF712255) CCAAS24TR C.neoformans strain JEC21 Cryptococcus ... 44 1e-04 4
(BJ396513) Dictyostelium discoideum cDNA clone:dds42o02, 5' ... 36 1e-04 4
(X16908) Yeast SRH1 gene for Srh1p, a homologue of the 54K s... 48 1e-04 3
(AJ777995) Populus euphratica EST, clone P0000400037H11F1. 40 1e-04 3
(AM636883) Entamoeba dispar GSS, clone dispar41f10.q1k. 62 1e-04 1
(AF344329) Arabidopsis thaliana clone C00252 (e) unknown pro... 50 1e-04 3
(AX506182) Sequence 877 from Patent WO0216655. 50 1e-04 3
(DB919164) Idiosepius paradoxus cDNA, clone:Ip_aB_034_F21, 5... 42 1e-04 3
>(AC114258) Dictyostelium discoideum chromosome 2 map
complement(427476-387492) strain AX4, complete sequence.
Length = 39984
Score = 1582 bits (798), Expect = 0.0
Identities = 798/798 (100%)
Strand = Plus / Minus
Query: 1119 atgaactcattcgtttattggatccaggtgtaccattatggaaaccaaccaaaggtaaat 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26788 atgaactcattcgtttattggatccaggtgtaccattatggaaaccaaccaaaggtaaat 26729
Query: 1179 caaatatagtaatgtttgtaggtttacaaggtgctggtaaaaccacatctgtcactaaat 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26728 caaatatagtaatgtttgtaggtttacaaggtgctggtaaaaccacatctgtcactaaat 26669
Query: 1239 tagcctatttttataagaagaaaggtttttcaactgcaatcgtttgtgctgatacttttc 1298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26668 tagcctatttttataagaagaaaggtttttcaactgcaatcgtttgtgctgatacttttc 26609
Query: 1299 gtgctggtgcattcgaccaagtacgtcacaatgccgcaaaggcaaagatccactactatg 1358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26608 gtgctggtgcattcgaccaagtacgtcacaatgccgcaaaggcaaagatccactactatg 26549
Query: 1359 gtagcgagactgagaaggatccagtcgtagtagcacgtactggtgttgatatctttaaaa 1418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26548 gtagcgagactgagaaggatccagtcgtagtagcacgtactggtgttgatatctttaaaa 26489
Query: 1419 aggatggaacagagatcatcatcgtcgatacatcaggtagacataaacaagatagtgagt 1478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26488 aggatggaacagagatcatcatcgtcgatacatcaggtagacataaacaagatagtgagt 26429
Query: 1479 tatttgaagagatgaaacaaattgaaacagcagtcaaacctgacaattgtattttcgtta 1538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26428 tatttgaagagatgaaacaaattgaaacagcagtcaaacctgacaattgtattttcgtta 26369
Query: 1539 tggatagttcaattggtcaagctgcatacgaacaagcaacagcatttagaagttcagtta 1598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26368 tggatagttcaattggtcaagctgcatacgaacaagcaacagcatttagaagttcagtta 26309
Query: 1599 aagttggttcaatcattatcaccaaaatggatggtaattcaatgggtggtggtgcaatct 1658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26308 aagttggttcaatcattatcaccaaaatggatggtaattcaatgggtggtggtgcaatct 26249
Query: 1659 ctgctgttgccgccactaatacacctatcattttcattggtactggtgaacatttaacag 1718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26248 ctgctgttgccgccactaatacacctatcattttcattggtactggtgaacatttaacag 26189
Query: 1719 atttagaattattcgatccttcaacatttgttagtaaacttttaggttatggtgatatga 1778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26188 atttagaattattcgatccttcaacatttgttagtaaacttttaggttatggtgatatga 26129
Query: 1779 aaggtatgttggaaaaaattaaagaagtcattccagaggattcaacttcattaaaagaaa 1838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26128 aaggtatgttggaaaaaattaaagaagtcattccagaggattcaacttcattaaaagaaa 26069
Query: 1839 ttgctcaaggtaaattcactcttagaagtatgcaacaacaatttcaacaaattatgcaat 1898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26068 ttgctcaaggtaaattcactcttagaagtatgcaacaacaatttcaacaaattatgcaat 26009
Query: 1899 taggtccaattgataaac 1916
||||||||||||||||||
Sbjct: 26008 taggtccaattgataaac 25991
Score = 1092 bits (551), Expect = 0.0
Identities = 551/551 (100%)
Strand = Plus / Minus
Query: 125 tggtgttagcagatttaggtaatcaattatcttcagcattaagatcattaaatgaaacaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27028 tggtgttagcagatttaggtaatcaattatcttcagcattaagatcattaaatgaaacaa 26969
Query: 185 ccattgtaaatgaagatacaattaatcaattattaaaagaggttggaaatgcattaagta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26968 ccattgtaaatgaagatacaattaatcaattattaaaagaggttggaaatgcattaagta 26909
Query: 245 aatcagatgttagtatgagtttaatcatacaaatgagaaagaatataaaagataagatta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26908 aatcagatgttagtatgagtttaatcatacaaatgagaaagaatataaaagataagatta 26849
Query: 305 aattggatcaaatggcagcaggtttaaataagagaaagataatcaaacaagttgtattcg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26848 aattggatcaaatggcagcaggtttaaataagagaaagataatcaaacaagttgtattcg 26789
Query: 365 atgaactcattcgtttattggatccaggtgtaccattatggaaaccaaccaaaggtaaat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26788 atgaactcattcgtttattggatccaggtgtaccattatggaaaccaaccaaaggtaaat 26729
Query: 425 caaatatagtaatgtttgtaggtttacaaggtgctggtaaaaccacatctgtcactaaat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26728 caaatatagtaatgtttgtaggtttacaaggtgctggtaaaaccacatctgtcactaaat 26669
Query: 485 tagcctatttttataagaagaaaggtttttcaactgcaatcgtttgtgctgatacttttc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26668 tagcctatttttataagaagaaaggtttttcaactgcaatcgtttgtgctgatacttttc 26609
Query: 545 gtgctggtgcattcgaccaagtacgtcacaatgccgcaaaggcaaagatccactactatg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26608 gtgctggtgcattcgaccaagtacgtcacaatgccgcaaaggcaaagatccactactatg 26549
Query: 605 gtagcgagactgagaaggatccagtcgtagtagcacgtactggtgttgatatctttaaaa 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26548 gtagcgagactgagaaggatccagtcgtagtagcacgtactggtgttgatatctttaaaa 26489
Query: 665 aggatggaaca 675
|||||||||||
Sbjct: 26488 aggatggaaca 26478
Score = 781 bits (394), Expect(2) = 0.0
Identities = 394/394 (100%)
Strand = Plus / Minus
Query: 1917 ttgtacaaatgatacctggtatgaatcaattaccacaattacaaggtaatgaaggtggtt 1976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25882 ttgtacaaatgatacctggtatgaatcaattaccacaattacaaggtaatgaaggtggtt 25823
Query: 1977 tgaaattaaaagcatatattaatatattggatagtttatcagaaaaagaattggatggaa 2036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25822 tgaaattaaaagcatatattaatatattggatagtttatcagaaaaagaattggatggaa 25763
Query: 2037 agaaaccaatcacacaaaaacgtattattacaattgctcaaggttcaggtagacatccaa 2096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25762 agaaaccaatcacacaaaaacgtattattacaattgctcaaggttcaggtagacatccaa 25703
Query: 2097 atgaggttgtagaattattggaacaacataaaacatttgaaaaacttattggtaaaggtg 2156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25702 atgaggttgtagaattattggaacaacataaaacatttgaaaaacttattggtaaaggtg 25643
Query: 2157 gtccaggtggtggtttgggtagtttgatggcaggtaaaggtggtccaaagaatatggaac 2216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25642 gtccaggtggtggtttgggtagtttgatggcaggtaaaggtggtccaaagaatatggaac 25583
Query: 2217 aagcaatgaaacaaatgaatgctaatggtggtatgcagggtttaatgaattcacttaaag 2276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25582 aagcaatgaaacaaatgaatgctaatggtggtatgcagggtttaatgaattcacttaaag 25523
Query: 2277 gtatgggtggaatgggtgatcttgcaaaaatgtt 2310
||||||||||||||||||||||||||||||||||
Sbjct: 25522 gtatgggtggaatgggtgatcttgcaaaaatgtt 25489
Score = 533 bits (269), Expect(2) = 0.0
Identities = 269/269 (100%)
Strand = Plus / Minus
Query: 2339 atgccaagtatgggtgaccttgccaaaatgatgggaggtatgggtggcggcggtagagga 2398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25460 atgccaagtatgggtgaccttgccaaaatgatgggaggtatgggtggcggcggtagagga 25401
Query: 2399 ggtggtggtatgccaaatatgggtgacctcgccaaaatgatgggaggcatgggaggtggt 2458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25400 ggtggtggtatgccaaatatgggtgacctcgccaaaatgatgggaggcatgggaggtggt 25341
Query: 2459 gctggtaaaggtggtcaaaatggtttccctaatcttgacttggattaaatttaaacttta 2518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25340 gctggtaaaggtggtcaaaatggtttccctaatcttgacttggattaaatttaaacttta 25281
Query: 2519 aaatacaattttgcgacctatttatcatcatattttataactctatatcctaacaacact 2578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25280 aaatacaattttgcgacctatttatcatcatattttataactctatatcctaacaacact 25221
Query: 2579 tttataatgtataattccaaacaatttcc 2607
|||||||||||||||||||||||||||||
Sbjct: 25220 tttataatgtataattccaaacaatttcc 25192
Score = 426 bits (215), Expect(2) = 0.0
Identities = 215/215 (100%)
Strand = Plus / Minus
Query: 893 atgccaagtatgggtgaccttgccaaaatgatgggaggtatgggtggcggcggtagagga 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25460 atgccaagtatgggtgaccttgccaaaatgatgggaggtatgggtggcggcggtagagga 25401
Query: 953 ggtggtggtatgccaaatatgggtgacctcgccaaaatgatgggaggcatgggaggtggt 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25400 ggtggtggtatgccaaatatgggtgacctcgccaaaatgatgggaggcatgggaggtggt 25341
Query: 1013 gctggtaaaggtggtcaaaatggtttccctaatcttgacttggattaaatttaaacttta 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25340 gctggtaaaggtggtcaaaatggtttccctaatcttgacttggattaaatttaaacttta 25281
Query: 1073 aaatacaattttgcgacctatttatcatcatattt 1107
|||||||||||||||||||||||||||||||||||
Sbjct: 25280 aaatacaattttgcgacctatttatcatcatattt 25246
Score = 389 bits (196), Expect(2) = 0.0
Identities = 196/196 (100%)
Strand = Plus / Minus
Query: 669 tggaacaacataaaacatttgaaaaacttattggtaaaggtggtccaggtggtggtttgg 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25684 tggaacaacataaaacatttgaaaaacttattggtaaaggtggtccaggtggtggtttgg 25625
Query: 729 gtagtttgatggcaggtaaaggtggtccaaagaatatggaacaagcaatgaaacaaatga 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25624 gtagtttgatggcaggtaaaggtggtccaaagaatatggaacaagcaatgaaacaaatga 25565
Query: 789 atgctaatggtggtatgcagggtttaatgaattcacttaaaggtatgggtggaatgggtg 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25564 atgctaatggtggtatgcagggtttaatgaattcacttaaaggtatgggtggaatgggtg 25505
Query: 849 atcttgcaaaaatgtt 864
||||||||||||||||
Sbjct: 25504 atcttgcaaaaatgtt 25489
Score = 75.8 bits (38), Expect(4) = 1e-19
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 956 ggtggtatgccaaatatgggtgacctcgccaaaatgatgggaggcatggg 1005
||||||||||||| |||||||||||| ||||||||||||||||| |||||
Sbjct: 25466 ggtggtatgccaagtatgggtgaccttgccaaaatgatgggaggtatggg 25417
Score = 63.9 bits (32), Expect(4) = 1e-19
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 2339 atgccaagtatgggtgaccttgccaaaatgatgggaggtatggg 2382
||||||| |||||||||||| ||||||||||||||||| |||||
Sbjct: 25391 atgccaaatatgggtgacctcgccaaaatgatgggaggcatggg 25348
Score = 32.2 bits (16), Expect(4) = 1e-19
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 18 tattaaaaactaattt 33
||||||||||||||||
Sbjct: 27135 tattaaaaactaattt 27120
Score = 30.2 bits (15), Expect(4) = 1e-19
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 743 ggtaaaggtggtcca 757
|||||||||||||||
Sbjct: 25652 ggtaaaggtggtcca 25638
Score = 75.8 bits (38), Expect = 8e-09
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 2402 ggtggtatgccaaatatgggtgacctcgccaaaatgatgggaggcatggg 2451
||||||||||||| |||||||||||| ||||||||||||||||| |||||
Sbjct: 25466 ggtggtatgccaagtatgggtgaccttgccaaaatgatgggaggtatggg 25417
Score = 63.9 bits (32), Expect = 3e-05
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 893 atgccaagtatgggtgaccttgccaaaatgatgggaggtatggg 936
||||||| |||||||||||| ||||||||||||||||| |||||
Sbjct: 25391 atgccaaatatgggtgacctcgccaaaatgatgggaggcatggg 25348
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,806,603,674
Number of extensions: 165753434
Number of successful extensions: 13596139
Number of sequences better than 10.0: 761
Length of query: 2696
Length of database: 95,242,211,685
Length adjustment: 25
Effective length of query: 2671
Effective length of database: 97,216,030,006
Effective search space: 259664016146026
Effective search space used: 259664016146026
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)
|
| protein update |
2009. 6.28 |
| Homology vs Protein |
Query= Contig-U10963-1 (Contig-U10963-1Q) /CSM_Contig/Contig-U10963-1Q.Seq.d
(2696 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q75K18) RecName: Full=Signal recognition particle 54 kDa protei... 702 0.0
(P37106) RecName: Full=Signal recognition particle 54 kDa protei... 379 e-103
AK318735_1(AK318735|pid:none) Arabidopsis thaliana AT1G48900 mRN... 374 e-101
GN109450_1(GN109450|pid:none) Sequence 14231 from Patent WO20090... 372 e-101
GN109448_1(GN109448|pid:none) Sequence 14229 from Patent WO20090... 372 e-101
(P49969) RecName: Full=Signal recognition particle 54 kDa protei... 372 e-101
GN109338_1(GN109338|pid:none) Sequence 14119 from Patent WO20090... 371 e-101
AC147009_5(AC147009|pid:none) Medicago truncatula clone mth2-139... 370 e-100
(P49966) RecName: Full=Signal recognition particle 54 kDa protei... 369 e-100
(P49971) RecName: Full=Signal recognition particle 54 kDa protei... 365 6e-99
EF147818_1(EF147818|pid:none) Populus trichocarpa clone WS0125_D... 364 1e-98
(Q8MZJ6) RecName: Full=Signal recognition particle 54 kDa protei... 363 2e-98
AB115419_1(AB115419|pid:none) Oryza sativa Japonica Group srp54-... 361 7e-98
BT044934_1(BT044934|pid:none) Salmo salar clone ssal-rgf-507-335... 360 2e-97
GN109362_1(GN109362|pid:none) Sequence 14143 from Patent WO20090... 359 3e-97
A88763(A88763) protein F21D5.7 [imported] - Caenorhabditis elega... 358 4e-97
BT043608_1(BT043608|pid:none) Salmo salar clone HM4_3367 signal ... 358 6e-97
(Q6AYB5) RecName: Full=Signal recognition particle 54 kDa protei... 357 1e-96
DQ646413_1(DQ646413|pid:none) Bombyx mori putative signal recogn... 357 2e-96
BC061368_1(BC061368|pid:none) Xenopus tropicalis signal recognit... 356 2e-96
(P61010) RecName: Full=Signal recognition particle 54 kDa protei... 356 3e-96
AK293319_1(AK293319|pid:none) Homo sapiens cDNA FLJ54343 complet... 356 3e-96
X16319_1(X16319|pid:none) Mouse mRNA for 54K subunit of signal r... 354 1e-95
CP000590_53(CP000590|pid:none) Ostreococcus lucimarinus CCE9901 ... 353 1e-95
(P49970) RecName: Full=Signal recognition particle 54 kDa protei... 353 2e-95
BC005543_1(BC005543|pid:none) Mus musculus signal recognition pa... 351 7e-95
AY094660_1(AY094660|pid:none) Drosophila melanogaster AT23778 fu... 350 2e-94
BT078577_1(BT078577|pid:none) Lepeophtheirus salmonis clone lsal... 350 2e-94
CP001329_482(CP001329|pid:none) Micromonas sp. RCC299 chromosome... 347 1e-93
AB023033_4(AB023033|pid:none) Arabidopsis thaliana genomic DNA, ... 347 1e-93
AK090018_1(AK090018|pid:none) Mus musculus colon RCB-0549 Cle-H3... 346 2e-93
CP001141_293(CP001141|pid:none) Phaeodactylum tricornutum CCAP 1... 345 4e-93
AM502242_38(AM502242|pid:none) Leishmania infantum chromosome 24. 343 2e-92
(Q99150) RecName: Full=Signal recognition particle 54 kDa protei... 342 3e-92
AY135212_1(AY135212|pid:none) Trypanosoma brucei signal recognit... 342 3e-92
CT005263_70(CT005263|pid:none) Leishmania major strain Friedlin,... 342 5e-92
(P21565) RecName: Full=Signal recognition particle 54 kDa protei... 341 7e-92
U42418_1(U42418|pid:none) Yarrowia lipolytica signal recognition... 339 3e-91
AM494961_75(AM494961|pid:none) Leishmania braziliensis chromosom... 338 6e-91
AC135414_19(AC135414|pid:none) Medicago truncatula clone mth2-8n... 338 8e-91
FN357459_2(FN357459|pid:none) Schistosoma mansoni genome sequenc... 337 1e-90
FN392322_333(FN392322|pid:none) Pichia pastoris GS115 chromosome... 337 2e-90
CR382124_369(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 336 2e-90
AE017345_366(AE017345|pid:none) Cryptococcus neoformans var. neo... 336 3e-90
CR380957_339(CR380957|pid:none) Candida glabrata strain CBS138 c... 333 2e-89
(O42816) RecName: Full=Signal recognition particle 54 kDa protei... 330 2e-88
CU928170_476(CU928170|pid:none) Kluyveromyces thermotolerans str... 330 2e-88
(P20424) RecName: Full=Signal recognition particle subunit SRP54... 325 5e-87
X16908_1(X16908|pid:none) Yeast SRH1 gene for Srh1p, a homologue... 325 7e-87
AE016814_227(AE016814|pid:none) Ashbya gossypii (= Eremothecium ... 325 7e-87
CU928175_716(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 324 1e-86
GN109368_1(GN109368|pid:none) Sequence 14149 from Patent WO20090... 322 4e-86
AL590444_97(AL590444|pid:none) chromosome IV of strain GB-M1 of ... 317 1e-84
CR954210_53(CR954210|pid:none) Ostreococcus tauri strain OTTH059... 315 4e-84
(B6YSS1) RecName: Full=Signal recognition 54 kDa protein; AltNam... 286 2e-75
(Q9V1E8) RecName: Full=Signal recognition 54 kDa protein; AltNam... 279 3e-73
BA000001_1742(BA000001|pid:none) Pyrococcus horikoshii OT3 DNA, ... 273 2e-71
(P70722) RecName: Full=Signal recognition 54 kDa protein; AltNam... 266 3e-69
(O27376) RecName: Full=Signal recognition 54 kDa protein; AltNam... 266 4e-69
(A0B638) RecName: Full=Signal recognition 54 kDa protein; AltNam... 265 9e-69
(A2BNB5) RecName: Full=Signal recognition 54 kDa protein; AltNam... 262 6e-68
(Q46E01) RecName: Full=Signal recognition 54 kDa protein; AltNam... 261 7e-68
(Q0W2G1) RecName: Full=Signal recognition 54 kDa protein; AltNam... 257 2e-66
(Q97ZE7) RecName: Full=Signal recognition 54 kDa protein; AltNam... 256 2e-66
CP000816_1038(CP000816|pid:none) Ignicoccus hospitalis KIN4/I, c... 254 2e-65
CP000867_1107(CP000867|pid:none) Methanococcus maripaludis C6, c... 253 2e-65
CP001403_1209(CP001403|pid:none) Sulfolobus islandicus Y.G.57.14... 253 3e-65
Y12702_1(Y12702|pid:none) S.acidocaldarius ffh gene. 253 3e-65
(O07853) RecName: Full=Signal recognition 54 kDa protein; AltNam... 253 3e-65
(A6UQJ8) RecName: Full=Signal recognition 54 kDa protein; AltNam... 253 3e-65
CP001399_1193(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 252 4e-65
(Q8THD0) RecName: Full=Signal recognition 54 kDa protein; AltNam... 250 2e-64
(Q8PXF3) RecName: Full=Signal recognition 54 kDa protein; AltNam... 250 2e-64
EU686628_8(EU686628|pid:none) Uncultured marine group III euryar... 249 3e-64
(Q6LX03) RecName: Full=Signal recognition 54 kDa protein; AltNam... 249 4e-64
(A4FVX4) RecName: Full=Signal recognition 54 kDa protein; AltNam... 249 4e-64
CP000505_499(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 249 5e-64
(Q18EV2) RecName: Full=Signal recognition 54 kDa protein; AltNam... 246 3e-63
(Q9YB62) RecName: Full=Signal recognition 54 kDa protein; AltNam... 246 3e-63
EF583999_16(EF583999|pid:none) Uncultured haloarchaeon clone fos... 246 3e-63
(A6VHE0) RecName: Full=Signal recognition 54 kDa protein; AltNam... 246 3e-63
(Q5UY20) RecName: Full=Signal recognition 54 kDa protein; AltNam... 244 1e-62
(O29633) RecName: Full=Signal recognition 54 kDa protein; AltNam... 243 3e-62
CP000254_2929(CP000254|pid:none) Methanospirillum hungatei JF-1,... 243 3e-62
(Q2NE47) RecName: Full=Signal recognition 54 kDa protein; AltNam... 241 1e-61
(B0R7X3) RecName: Full=Signal recognition 54 kDa protein; AltNam... 238 1e-60
(Q979Y8) RecName: Full=Signal recognition 54 kDa protein; AltNam... 236 4e-60
(A1RS43) RecName: Full=Signal recognition 54 kDa protein; AltNam... 233 4e-59
(A2STI3) RecName: Full=Signal recognition 54 kDa protein; AltNam... 232 6e-59
EU016628_22(EU016628|pid:none) Uncultured Group I marine crenarc... 232 6e-59
(B1Y9L4) RecName: Full=Signal recognition 54 kDa protein; AltNam... 230 2e-58
(A3MWX6) RecName: Full=Signal recognition 54 kDa protein; AltNam... 228 9e-58
CP000968_1575(CP000968|pid:none) Candidatus Korarchaeum cryptofi... 228 1e-57
AY810470_1(AY810470|pid:none) Schistosoma japonicum SJCHGC03967 ... 226 3e-57
CP000866_527(CP000866|pid:none) Nitrosopumilus maritimus SCM1, c... 226 3e-57
EU016623_3(EU016623|pid:none) Uncultured marine microorganism HF... 203 3e-50
CP000923_1675(CP000923|pid:none) Thermoanaerobacter sp. X514, co... 199 6e-49
AP009178_1505(AP009178|pid:none) Nitratiruptor sp. SB155-2 genom... 197 2e-48
CP000924_1258(CP000924|pid:none) Thermoanaerobacter pseudethanol... 196 3e-48
CP001102_912(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 196 4e-48
CP001098_723(CP001098|pid:none) Halothermothrix orenii H 168, co... 196 4e-48
EF676559_1(EF676559|pid:none) Picea sitchensis clone WS02742_C17... 196 5e-48
CP000517_1081(CP000517|pid:none) Lactobacillus helveticus DPC 45... 196 5e-48
AC112209_22(AC112209|pid:none) Oryza sativa (japonica cultivar-g... 196 5e-48
CP000679_2075(CP000679|pid:none) Caldicellulosiruptor saccharoly... 195 8e-48
CP000252_2330(CP000252|pid:none) Syntrophus aciditrophicus SB, c... 195 8e-48
AE009442_48(AE009442|pid:none) Xylella fastidiosa Temecula1, com... 193 2e-47
GN109434_1(GN109434|pid:none) Sequence 14215 from Patent WO20090... 193 3e-47
AL445564_61(AL445564|pid:none) Mycoplasma pulmonis (strain UAB C... 192 4e-47
CU466930_1522(CU466930|pid:none) Candidatus Cloacamonas acidamin... 192 7e-47
AE008923_1268(AE008923|pid:none) Xanthomonas axonopodis pv. citr... 191 9e-47
AM039952_1338(AM039952|pid:none) Xanthomonas campestris pv. vesi... 191 1e-46
CP001229_995(CP001229|pid:none) Sulfurihydrogenibium azorense Az... 190 2e-46
GN109436_1(GN109436|pid:none) Sequence 14217 from Patent WO20090... 190 2e-46
AE003849_73(AE003849|pid:none) Xylella fastidiosa 9a5c, complete... 190 3e-46
CP000509_3218(CP000509|pid:none) Nocardioides sp. JS614, complet... 189 3e-46
CP000453_1921(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-... 189 6e-46
AE015927_1101(AE015927|pid:none) Clostridium tetani E88, complet... 188 8e-46
CP000413_759(CP000413|pid:none) Lactobacillus gasseri ATCC 33323... 188 8e-46
AX763776_1(AX763776|pid:none) Sequence 83 from Patent WO03040180... 188 1e-45
CP000909_2006(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 187 1e-45
AE008691_1367(AE008691|pid:none) Thermoanaerobacter tengcongensi... 187 2e-45
CP001275_1759(CP001275|pid:none) Thermomicrobium roseum DSM 5159... 187 2e-45
AE013598_1301(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 186 3e-45
AP008229_1215(AP008229|pid:none) Xanthomonas oryzae pv. oryzae M... 186 3e-45
CP000716_1759(CP000716|pid:none) Thermosipho melanesiensis BI429... 186 4e-45
CT971583_1731(CT971583|pid:none) Synechococcus WH7803 complete g... 186 5e-45
CP000853_1437(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,... 186 5e-45
AM180355_1294(AM180355|pid:none) Clostridium difficile 630 compl... 185 7e-45
CP000285_2996(CP000285|pid:none) Chromohalobacter salexigens DSM... 185 7e-45
BA000035_1963(BA000035|pid:none) Corynebacterium efficiens YS-31... 185 7e-45
CP000885_2379(CP000885|pid:none) Clostridium phytofermentans ISD... 185 9e-45
CP001032_2825(CP001032|pid:none) Opitutus terrae PB90-1, complet... 184 1e-44
CT573213_5659(CT573213|pid:none) Frankia alni str. ACN14A chromo... 184 1e-44
BX569693_197(BX569693|pid:none) Synechococcus sp. WH8102 complet... 184 1e-44
CP001601_1583(CP001601|pid:none) Corynebacterium aurimucosum ATC... 184 1e-44
BA000045_2639(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 184 2e-44
AE017333_1722(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 183 2e-44
CP000553_1699(CP000553|pid:none) Prochlorococcus marinus str. NA... 183 2e-44
CP000488_550(CP000488|pid:none) Candidatus Ruthia magnifica str.... 183 2e-44
AP011115_6585(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 183 2e-44
CP001124_3392(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 183 3e-44
CP000412_1111(CP000412|pid:none) Lactobacillus delbrueckii subsp... 183 3e-44
CP000481_1559(CP000481|pid:none) Acidothermus cellulolyticus 11B... 183 3e-44
AP007281_1088(AP007281|pid:none) Lactobacillus reuteri JCM 1112 ... 183 3e-44
AP006618_4176(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 182 4e-44
CP001252_3046(CP001252|pid:none) Shewanella baltica OS223, compl... 182 4e-44
GN109444_1(GN109444|pid:none) Sequence 14225 from Patent WO20090... 182 4e-44
CP000381_1758(CP000381|pid:none) Neisseria meningitidis 053442, ... 182 6e-44
CP000383_2712(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 182 6e-44
CP000088_659(CP000088|pid:none) Thermobifida fusca YX, complete ... 182 6e-44
AF482013_1(AF482013|pid:none) Neisseria gonorrhoeae signal recog... 182 7e-44
AE002098_281(AE002098|pid:none) Neisseria meningitidis MC58, com... 182 7e-44
CP001080_622(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1... 182 7e-44
CP001390_1467(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 182 7e-44
AM743169_1298(AM743169|pid:none) Stenotrophomonas maltophilia K2... 182 7e-44
CP000444_2899(CP000444|pid:none) Shewanella sp. MR-7, complete g... 182 7e-44
AM942444_796(AM942444|pid:none) Corynebacterium urealyticum DSM ... 182 7e-44
CP000108_792(CP000108|pid:none) Chlorobium chlorochromatii CaD3,... 182 7e-44
CP000382_1313(CP000382|pid:none) Clostridium novyi NT, complete ... 182 7e-44
AL157959_1955(AL157959|pid:none) Neisseria meningitidis serogrou... 182 7e-44
CP001100_2442(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 182 7e-44
CP000820_1132(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 182 7e-44
CP000812_126(CP000812|pid:none) Thermotoga lettingae TMO, comple... 181 9e-44
CP000095_1653(CP000095|pid:none) Prochlorococcus marinus str. NA... 181 9e-44
CP001078_1125(CP001078|pid:none) Clostridium botulinum E3 str. A... 181 9e-44
AE017226_2073(AE017226|pid:none) Treponema denticola ATCC 35405,... 181 9e-44
CP000667_1286(CP000667|pid:none) Salinispora tropica CNB-440, co... 181 1e-43
GN109442_1(GN109442|pid:none) Sequence 14223 from Patent WO20090... 181 1e-43
CP000110_868(CP000110|pid:none) Synechococcus sp. CC9605, comple... 181 1e-43
CP000891_1279(CP000891|pid:none) Shewanella baltica OS195, compl... 181 1e-43
CP000446_2828(CP000446|pid:none) Shewanella sp. MR-4, complete g... 181 1e-43
CP000431_6470(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 181 2e-43
CP000875_4601(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 181 2e-43
CP000227_3529(CP000227|pid:none) Bacillus cereus Q1, complete ge... 181 2e-43
CP000724_2655(CP000724|pid:none) Alkaliphilus metalliredigens QY... 181 2e-43
AP009153_2347(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 180 2e-43
CP000249_3552(CP000249|pid:none) Frankia sp. CcI3, complete geno... 180 2e-43
AM420293_5875(AM420293|pid:none) Saccharopolyspora erythraea NRR... 180 2e-43
BA000016_1713(BA000016|pid:none) Clostridium perfringens str. 13... 180 2e-43
BA000043_1196(BA000043|pid:none) Geobacillus kaustophilus HTA426... 180 3e-43
AE014299_1334(AE014299|pid:none) Shewanella oneidensis MR-1, com... 180 3e-43
AJ938182_1101(AJ938182|pid:none) Staphylococcus aureus RF122 com... 180 3e-43
AE015929_912(AE015929|pid:none) Staphylococcus epidermidis ATCC ... 180 3e-43
AP009389_1724(AP009389|pid:none) Pelotomaculum thermopropionicum... 180 3e-43
CP000029_786(CP000029|pid:none) Staphylococcus epidermidis RP62A... 180 3e-43
CP000698_3699(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 179 4e-43
AE016830_1591(AE016830|pid:none) Enterococcus faecalis V583, com... 179 4e-43
BX908798_654(BX908798|pid:none) Parachlamydia-related symbiont U... 179 4e-43
CP001101_1233(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 179 4e-43
CP001359_3419(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 179 5e-43
CP000507_883(CP000507|pid:none) Shewanella amazonensis SB2B, com... 179 5e-43
BX571856_1187(BX571856|pid:none) Staphylococcus aureus subsp. au... 179 6e-43
CP000492_1470(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 179 6e-43
CP000113_4727(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 179 6e-43
AP009324_1228(AP009324|pid:none) Staphylococcus aureus subsp. au... 179 6e-43
GN109440_1(GN109440|pid:none) Sequence 14221 from Patent WO20090... 178 8e-43
AE016877_3655(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 178 8e-43
AP008955_3618(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 178 8e-43
AF089724_1(AF089724|pid:none) Pisum sativum signal recognition p... 178 1e-42
CP001034_1352(CP001034|pid:none) Natranaerobius thermophilus JW/... 178 1e-42
CP000557_1038(CP000557|pid:none) Geobacillus thermodenitrificans... 178 1e-42
CR628336_467(CR628336|pid:none) Legionella pneumophila str. Pari... 177 1e-42
CP000076_1072(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 177 1e-42
CP000414_1481(CP000414|pid:none) Leuconostoc mesenteroides subsp... 177 1e-42
(Q55311) RecName: Full=Signal sequence-binding protein; &X92071... 177 1e-42
CP000359_1427(CP000359|pid:none) Deinococcus geothermalis DSM 11... 177 1e-42
AP009552_5368(AP009552|pid:none) Microcystis aeruginosa NIES-843... 177 1e-42
CP001131_3357(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 177 1e-42
CP000728_2378(CP000728|pid:none) Clostridium botulinum F str. La... 177 2e-42
AE016879_3653(AE016879|pid:none) Bacillus anthracis str. Ames, c... 177 2e-42
AP006840_1465(AP006840|pid:none) Symbiobacterium thermophilum IA... 177 2e-42
CP000155_1692(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 177 2e-42
CP001279_1462(CP001279|pid:none) Nautilia profundicola AmH, comp... 177 2e-42
AM412317_2445(AM412317|pid:none) Clostridium botulinum A str. AT... 177 2e-42
CP001110_1384(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 177 2e-42
CP000148_2840(CP000148|pid:none) Geobacter metallireducens GS-15... 177 2e-42
CP000251_3296(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 177 2e-42
CP001322_4618(CP001322|pid:none) Desulfatibacillum alkenivorans ... 177 2e-42
CP000386_1369(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 176 3e-42
AE000512_1538(AE000512|pid:none) Thermotoga maritima MSB8, compl... 176 3e-42
CP000813_1479(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 176 4e-42
CP001620_1131(CP001620|pid:none) Corynebacterium kroppenstedtii ... 176 4e-42
CR628337_443(CR628337|pid:none) Legionella pneumophila str. Lens... 176 4e-42
AM286690_797(AM286690|pid:none) Alcanivorax borkumensis SK2, com... 176 4e-42
AE004091_3745(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 176 4e-42
AF071565_1(AF071565|pid:none) Streptomyces lividans signal recog... 176 4e-42
CP000282_1200(CP000282|pid:none) Saccharophagus degradans 2-40, ... 176 5e-42
CP001341_2191(CP001341|pid:none) Arthrobacter chlorophenolicus A... 176 5e-42
CR936503_717(CR936503|pid:none) Lactobacillus sakei strain 23K c... 176 5e-42
AM778928_25(AM778928|pid:none) Microcystis aeruginosa PCC 7806 g... 176 5e-42
CP000962_2426(CP000962|pid:none) Clostridium botulinum A3 str. L... 176 5e-42
CP000769_3332(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 176 5e-42
CP001154_2469(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 176 5e-42
AE017180_638(AE017180|pid:none) Geobacter sulfurreducens PCA, co... 176 5e-42
CP000860_620(CP000860|pid:none) Candidatus Desulforudis audaxvia... 176 5e-42
CP000435_741(CP000435|pid:none) Synechococcus sp. CC9311, comple... 176 5e-42
CP000961_1244(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 176 5e-42
CP000934_1641(CP000934|pid:none) Cellvibrio japonicus Ueda107, c... 176 5e-42
AF092168_1(AF092168|pid:none) Arabidopsis thaliana signal recogn... 176 5e-42
AE015450_288(AE015450|pid:none) Mycoplasma gallisepticum strain ... 176 5e-42
AM181176_4897(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 176 5e-42
AE017332_59(AE017332|pid:none) Mycoplasma hyopneumoniae 232, com... 175 7e-42
CP000448_1442(CP000448|pid:none) Syntrophomonas wolfei subsp. wo... 175 7e-42
CP001184_103(CP001184|pid:none) Ureaplasma urealyticum serovar 1... 175 7e-42
CP001339_831(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, c... 175 7e-42
CP001037_2587(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 175 7e-42
(P74214) RecName: Full=Signal recognition particle protein; AltN... 175 9e-42
CP000712_4207(CP000712|pid:none) Pseudomonas putida F1, complete... 175 9e-42
CP000746_743(CP000746|pid:none) Actinobacillus succinogenes 130Z... 175 9e-42
CP000462_641(CP000462|pid:none) Aeromonas hydrophila subsp. hydr... 175 9e-42
CP000926_1058(CP000926|pid:none) Pseudomonas putida GB-1, comple... 175 9e-42
CP000644_611(CP000644|pid:none) Aeromonas salmonicida subsp. sal... 174 1e-41
CP000804_1620(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 174 1e-41
CP000675_459(CP000675|pid:none) Legionella pneumophila str. Corb... 174 1e-41
CP000792_1131(CP000792|pid:none) Campylobacter concisus 13826, c... 174 1e-41
CP000764_2357(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 174 2e-41
AE017354_389(AE017354|pid:none) Legionella pneumophila subsp. pn... 174 2e-41
CP000388_1659(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 174 2e-41
CP000916_1148(CP000916|pid:none) Thermotoga neapolitana DSM 4359... 174 2e-41
AE006470_1151(AE006470|pid:none) Chlorobium tepidum TLS, complet... 174 2e-41
AI1299(AI1299) signal recognition particle protein Ffh homolog f... 174 2e-41
AM285304_239(AM285304|pid:none) Spiroplasma citri GII3-3X chromo... 174 2e-41
CP000686_1247(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 174 2e-41
AE017285_836(AE017285|pid:none) Desulfovibrio vulgaris subsp. vu... 174 2e-41
CP001291_4074(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 174 2e-41
AP009247_536(AP009247|pid:none) Candidatus Vesicomyosocius okuta... 174 2e-41
CP000949_4132(CP000949|pid:none) Pseudomonas putida W619, comple... 174 2e-41
CP000422_795(CP000422|pid:none) Pediococcus pentosaceus ATCC 257... 174 2e-41
CP000411_409(CP000411|pid:none) Oenococcus oeni PSU-1, complete ... 173 3e-41
CP000514_2279(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 173 3e-41
(P37105) RecName: Full=Signal recognition particle protein; AltN... 173 3e-41
AI1671(AI1671) signal recognition particle protein Ffh homolog f... 173 3e-41
AP009493_1892(AP009493|pid:none) Streptomyces griseus subsp. gri... 173 3e-41
AB2050(AB2050) signal recognition particle protein [imported] - ... 173 3e-41
CT573326_3951(CT573326|pid:none) Pseudomonas entomophila str. L4... 173 3e-41
AP006627_2286(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 172 4e-41
AE001437_1733(AE001437|pid:none) Clostridium acetobutylicum ATCC... 172 4e-41
AE017340_1716(AE017340|pid:none) Idiomarina loihiensis L2TR, com... 172 4e-41
AM746676_8554(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 172 4e-41
CP001358_1781(CP001358|pid:none) Desulfovibrio desulfuricans sub... 172 6e-41
CP000479_3639(CP000479|pid:none) Mycobacterium avium 104, comple... 172 6e-41
AP006716_1677(AP006716|pid:none) Staphylococcus haemolyticus JCS... 172 8e-41
AE005176_1616(AE005176|pid:none) Lactococcus lactis subsp. lacti... 172 8e-41
BX571863_47(BX571863|pid:none) Photorhabdus luminescens subsp. l... 172 8e-41
CP001321_1359(CP001321|pid:none) Haemophilus parasuis SH0165, co... 171 1e-40
CP000075_1280(CP000075|pid:none) Pseudomonas syringae pv. syring... 171 1e-40
CT573071_1077(CT573071|pid:none) Kuenenia stuttgartiensis genome... 171 1e-40
BX950851_3334(BX950851|pid:none) Erwinia carotovora subsp. atros... 171 1e-40
CP000806_3468(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 171 1e-40
CP000771_627(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 171 1e-40
CP000323_1978(CP000323|pid:none) Psychrobacter cryohalolentis K5... 171 2e-40
FM177140_1764(FM177140|pid:none) Lactobacillus casei BL23 comple... 171 2e-40
AE014295_951(AE014295|pid:none) Bifidobacterium longum NCC2705, ... 171 2e-40
AE017282_1260(AE017282|pid:none) Methylococcus capsulatus str. B... 171 2e-40
CP000387_1103(CP000387|pid:none) Streptococcus sanguinis SK36, c... 171 2e-40
BA000026_253(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, c... 170 2e-40
CP000082_1707(CP000082|pid:none) Psychrobacter arcticus 273-4, c... 170 2e-40
CP000767_1252(CP000767|pid:none) Campylobacter curvus 525.92, co... 170 3e-40
AP010656_579(AP010656|pid:none) Candidatus Azobacteroides pseudo... 170 3e-40
CP000436_1435(CP000436|pid:none) Haemophilus somnus 129PT, compl... 170 3e-40
AE000513_1797(AE000513|pid:none) Deinococcus radiodurans R1 chro... 170 3e-40
CR767821_564(CR767821|pid:none) Ehrlichia ruminantium strain Wel... 169 4e-40
BA000031_2534(BA000031|pid:none) Vibrio parahaemolyticus RIMD 22... 169 4e-40
CP001615_2871(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 169 4e-40
CP000687_1722(CP000687|pid:none) Actinobacillus pleuropneumoniae... 169 4e-40
CP001281_1134(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 169 5e-40
CP000937_1774(CP000937|pid:none) Francisella philomiragia subsp.... 169 5e-40
AE016827_519(AE016827|pid:none) Mannheimia succiniciproducens MB... 169 5e-40
CP000058_1299(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 169 5e-40
AP009179_367(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic D... 169 6e-40
AE017283_1428(AE017283|pid:none) Propionibacterium acnes KPA1712... 169 6e-40
CP001015_1169(CP001015|pid:none) Streptococcus pneumoniae G54, c... 169 6e-40
BA000037_2789(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, ch... 169 6e-40
CP001147_1860(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 169 6e-40
AE005672_1215(AE005672|pid:none) Streptococcus pneumoniae TIGR4,... 169 6e-40
CP000919_1140(CP000919|pid:none) Streptococcus pneumoniae JJA, c... 169 6e-40
CP000240_258(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-13... 168 8e-40
CP001033_1250(CP001033|pid:none) Streptococcus pneumoniae CGSP14... 168 8e-40
AE017143_1690(AE017143|pid:none) Haemophilus ducreyi strain 3500... 168 8e-40
BX248358_160(BX248358|pid:none) Corynebacterium diphtheriae grav... 168 1e-39
AE016822_1195(AE016822|pid:none) Leifsonia xyli subsp. xyli str.... 168 1e-39
CP000094_1017(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 168 1e-39
CP001146_1360(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 168 1e-39
FJ227541_1(FJ227541|pid:none) Lactobacillus casei strain lm41 si... 168 1e-39
(Q54431) RecName: Full=Signal recognition particle protein; AltN... 168 1e-39
CP001095_376(CP001095|pid:none) Bifidobacterium longum subsp. in... 167 1e-39
CP000325_1695(CP000325|pid:none) Mycobacterium ulcerans Agy99, c... 167 1e-39
CP000472_3602(CP000472|pid:none) Shewanella piezotolerans WP3, c... 167 1e-39
CP000825_1509(CP000825|pid:none) Prochlorococcus marinus str. MI... 167 2e-39
AP009484_823(AP009484|pid:none) Macrococcus caseolyticus JCSC540... 167 2e-39
CP001616_2757(CP001616|pid:none) Tolumonas auensis DSM 9187, com... 167 2e-39
AJ749949_964(AJ749949|pid:none) Francisella tularensis subsp. tu... 167 2e-39
CP000627_85(CP000627|pid:none) Vibrio cholerae O395 chromosome 2... 167 2e-39
AC167711_7(AC167711|pid:none) Medicago truncatula chromosome 7 c... 167 2e-39
AE004439_1183(AE004439|pid:none) Pasteurella multocida subsp. mu... 167 2e-39
CP000236_456(CP000236|pid:none) Ehrlichia chaffeensis str. Arkan... 167 2e-39
AE017321_49(AE017321|pid:none) Wolbachia endosymbiont strain TRS... 167 2e-39
AP007255_4062(AP007255|pid:none) Magnetospirillum magneticum AMB... 166 3e-39
CP000608_704(CP000608|pid:none) Francisella tularensis subsp. tu... 166 3e-39
CP000672_492(CP000672|pid:none) Haemophilus influenzae PittGG, c... 166 3e-39
CP000776_522(CP000776|pid:none) Campylobacter hominis ATCC BAA-3... 166 4e-39
CP000023_826(CP000023|pid:none) Streptococcus thermophilus LMG 1... 166 4e-39
CP000020_542(CP000020|pid:none) Vibrio fischeri ES114 chromosome... 166 4e-39
CP000262_1064(CP000262|pid:none) Streptococcus pyogenes MGAS1075... 166 4e-39
AD0400(AD0400) signal recognition particle protein [imported] - ... 166 4e-39
CP000056_885(CP000056|pid:none) Streptococcus pyogenes MGAS6180,... 166 4e-39
CP000671_483(CP000671|pid:none) Haemophilus influenzae PittEE, c... 166 4e-39
CP000260_1029(CP000260|pid:none) Streptococcus pyogenes MGAS1027... 166 4e-39
BX936398_833(BX936398|pid:none) Yersinia pseudotuberculosis IP32... 166 4e-39
CP000576_1472(CP000576|pid:none) Prochlorococcus marinus str. MI... 166 5e-39
CP000048_666(CP000048|pid:none) Borrelia hermsii DAH, complete g... 166 5e-39
U88582_3(U88582|pid:none) Streptococcus mutans ProX (opuABC) gen... 166 5e-39
CP000356_2707(CP000356|pid:none) Sphingopyxis alaskensis RB2256,... 166 5e-39
CP000259_1016(CP000259|pid:none) Streptococcus pyogenes MGAS9429... 166 5e-39
CP000826_847(CP000826|pid:none) Serratia proteamaculans 568, com... 165 7e-39
CR543861_753(CR543861|pid:none) Acinetobacter sp. ADP1 complete ... 165 7e-39
CP000829_886(CP000829|pid:none) Streptococcus pyogenes NZ131, co... 165 7e-39
BX548174_1473(BX548174|pid:none) Prochlorococcus marinus MED4 co... 165 7e-39
CP000857_2692(CP000857|pid:none) Salmonella enterica subsp. ente... 165 7e-39
CP000140_210(CP000140|pid:none) Parabacteroides distasonis ATCC ... 165 9e-39
AP008971_525(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 165 9e-39
CP001157_3828(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 165 9e-39
AM233362_1238(AM233362|pid:none) Francisella tularensis subsp. h... 165 9e-39
AE006468_2602(AE006468|pid:none) Salmonella enterica subsp. ente... 165 9e-39
CP001600_3107(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 165 9e-39
CP000239_1022(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, com... 164 1e-38
BA000034_1041(BA000034|pid:none) Streptococcus pyogenes SSI-1 DN... 164 1e-38
CP001139_534(CP001139|pid:none) Vibrio fischeri MJ11 chromosome ... 164 1e-38
CP001103_1674(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 164 1e-38
AM933173_2562(AM933173|pid:none) Salmonella enterica subsp. ente... 164 1e-38
CP001129_981(CP001129|pid:none) Streptococcus equi subsp. zooepi... 164 2e-38
(P44518) RecName: Full=Signal recognition particle protein; AltN... 164 2e-38
CP000551_1481(CP000551|pid:none) Prochlorococcus marinus str. AS... 164 2e-38
CP000814_674(CP000814|pid:none) Campylobacter jejuni subsp. jeju... 164 2e-38
FP236842_2784(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/9... 164 2e-38
AE004092_915(AE004092|pid:none) Streptococcus pyogenes M1 GAS, c... 164 2e-38
CP000017_914(CP000017|pid:none) Streptococcus pyogenes MGAS5005,... 163 3e-38
CP000025_784(CP000025|pid:none) Campylobacter jejuni RM1221, com... 163 3e-38
CP001348_700(CP001348|pid:none) Clostridium cellulolyticum H10, ... 163 3e-38
CP000111_1504(CP000111|pid:none) Prochlorococcus marinus str. MI... 163 3e-38
BX293980_398(BX293980|pid:none) Mycoplasma mycoides subsp. mycoi... 163 3e-38
AM942759_375(AM942759|pid:none) Proteus mirabilis strain HI4320,... 163 3e-38
AM286415_797(AM286415|pid:none) Yersinia enterocolitica subsp. e... 163 3e-38
AP008981_838(AP008981|pid:none) Orientia tsutsugamushi str. Iked... 163 3e-38
CP000975_1271(CP000975|pid:none) Methylacidiphilum infernorum V4... 162 5e-38
BX842651_292(BX842651|pid:none) Bdellovibrio bacteriovorus compl... 162 5e-38
CR378673_1(CR378673|pid:none) Photobacterium profundum SS9; segm... 162 5e-38
AE017263_481(AE017263|pid:none) Mesoplasma florum L1 complete ge... 162 6e-38
GM016639_288(GM016639|pid:none) Sequence 1469 from Patent EP1923... 162 8e-38
CP001020_1252(CP001020|pid:none) Coxiella burnetii CbuK_Q154, co... 162 8e-38
AP006878_654(AP006878|pid:none) Thermococcus kodakarensis KOD1 D... 162 8e-38
CP000970_2676(CP000970|pid:none) Escherichia coli SMS-3-5, compl... 162 8e-38
AE015924_967(AE015924|pid:none) Porphyromonas gingivalis W83, co... 162 8e-38
(Q01442) RecName: Full=Signal recognition particle protein; AltN... 161 1e-37
AP009380_1205(AP009380|pid:none) Porphyromonas gingivalis ATCC 3... 161 1e-37
CP000266_2648(CP000266|pid:none) Shigella flexneri 5 str. 8401, ... 161 1e-37
X01818_1(X01818|pid:none) E. coli trmD operon and nearby regions. 161 1e-37
CP000360_3031(CP000360|pid:none) Acidobacteria bacterium Ellin34... 161 1e-37
CP000248_1399(CP000248|pid:none) Novosphingobium aromaticivorans... 161 1e-37
AM494475_785(AM494475|pid:none) Orientia tsutsugamushi Boryong c... 161 1e-37
CP000269_2985(CP000269|pid:none) Janthinobacterium sp. Marseille... 161 1e-37
CP000493_1540(CP000493|pid:none) Hyperthermus butylicus DSM 5456... 161 1e-37
CP001019_1396(CP001019|pid:none) Coxiella burnetii CbuG_Q212, co... 161 1e-37
CP000932_952(CP000932|pid:none) Campylobacter lari RM2100, compl... 160 2e-37
AP009152_1058(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, ... 160 2e-37
CU928164_2797(CU928164|pid:none) Escherichia coli IAI39 chromoso... 160 2e-37
CP000107_535(CP000107|pid:none) Ehrlichia canis str. Jake, compl... 160 2e-37
CP000890_481(CP000890|pid:none) Coxiella burnetii RSA 331, compl... 160 3e-37
CP000855_596(CP000855|pid:none) Thermococcus onnurineus NA1, com... 160 3e-37
DQ074965_1(DQ074965|pid:none) Lactobacillus reuteri lr0017 (lr00... 159 4e-37
CP001087_3062(CP001087|pid:none) Desulfobacterium autotrophicum ... 159 4e-37
AE016828_379(AE016828|pid:none) Coxiella burnetii RSA 493, compl... 159 4e-37
AM260525_2026(AM260525|pid:none) Bartonella tribocorum CIP 10547... 159 5e-37
CP000157_1496(CP000157|pid:none) Erythrobacter litoralis HTCC259... 159 7e-37
CU207211_2625(CU207211|pid:none) Herminiimonas arsenicoxydans ch... 159 7e-37
AM902716_4344(AM902716|pid:none) Bordetella petrii strain DSM 12... 158 9e-37
CP000090_2925(CP000090|pid:none) Ralstonia eutropha JMP134 chrom... 158 9e-37
AE017221_674(AE017221|pid:none) Thermus thermophilus HB27, compl... 158 9e-37
CP000581_85(CP000581|pid:none) Ostreococcus lucimarinus CCE9901 ... 158 9e-37
BA000012_3367(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 158 9e-37
AM889285_3092(AM889285|pid:none) Gluconacetobacter diazotrophicu... 158 1e-36
U95207_1(U95207|pid:none) Thermococcus sp. AN1 signal recognitio... 157 1e-36
CP001205_660(CP001205|pid:none) Borrelia burgdorferi ZS7, comple... 157 1e-36
CP000678_701(CP000678|pid:none) Methanobrevibacter smithii ATCC ... 157 2e-36
CP001217_1111(CP001217|pid:none) Helicobacter pylori P12, comple... 157 2e-36
CP001173_1071(CP001173|pid:none) Helicobacter pylori G27, comple... 157 2e-36
AE000783_693(AE000783|pid:none) Borrelia burgdorferi B31, comple... 157 2e-36
CP000896_327(CP000896|pid:none) Acholeplasma laidlawii PG-8A, co... 157 2e-36
(P56005) RecName: Full=Signal recognition particle protein; AltN... 156 3e-36
CP001298_614(CP001298|pid:none) Methylobacterium chloromethanicu... 156 3e-36
CP001001_3567(CP001001|pid:none) Methylobacterium radiotolerans ... 156 3e-36
CP000908_636(CP000908|pid:none) Methylobacterium extorquens PA1,... 156 3e-36
BX640424_175(BX640424|pid:none) Bordetella parapertussis strain ... 156 3e-36
BX248583_163(BX248583|pid:none) Blochmannia floridanus complete ... 156 4e-36
CP000159_1592(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 156 4e-36
CP000697_2124(CP000697|pid:none) Acidiphilium cryptum JF-5, comp... 156 4e-36
CP000362_1222(CP000362|pid:none) Roseobacter denitrificans OCh 1... 156 4e-36
CP000267_3289(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 155 6e-36
CP000513_402(CP000513|pid:none) Dichelobacter nodosus VCS1703A, ... 155 7e-36
AM167904_452(AM167904|pid:none) Bordetella avium 197N complete g... 155 7e-36
CP000049_665(CP000049|pid:none) Borrelia turicatae 91E135, compl... 155 9e-36
AL954747_1461(AL954747|pid:none) Nitrosomonas europaea ATCC 1971... 154 1e-35
CP000133_3900(CP000133|pid:none) Rhizobium etli CFN 42, complete... 154 2e-35
BX897699_1548(BX897699|pid:none) Bartonella henselae strain Hous... 154 2e-35
CP000993_654(CP000993|pid:none) Borrelia recurrentis A1, complet... 154 2e-35
AM180252_574(AM180252|pid:none) Lawsonia intracellularis PHE/MN1... 154 2e-35
CP000661_174(CP000661|pid:none) Rhodobacter sphaeroides ATCC 170... 154 2e-35
AE009950_1766(AE009950|pid:none) Pyrococcus furiosus DSM 3638, c... 154 2e-35
CP000655_200(CP000655|pid:none) Polynucleobacter necessarius sub... 153 3e-35
CP000976_665(CP000976|pid:none) Borrelia duttonii Ly, complete g... 153 3e-35
CP000450_1658(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 153 3e-35
CP000471_499(CP000471|pid:none) Magnetococcus sp. MC-1, complete... 153 4e-35
CP000061_65(CP000061|pid:none) Aster yellows witches'-broom phyt... 153 4e-35
AM260479_3164(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 153 4e-35
CP000512_850(CP000512|pid:none) Acidovorax citrulli AAC00-1, com... 152 5e-35
CP000781_1453(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 152 5e-35
AP006861_353(AP006861|pid:none) Chlamydophila felis Fe/C-56 DNA,... 152 5e-35
CP001074_4180(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 152 6e-35
CP000577_2696(CP000577|pid:none) Rhodobacter sphaeroides ATCC 17... 152 6e-35
AP008232_545(AP008232|pid:none) Sodalis glossinidius str. 'morsi... 152 6e-35
CP000230_1180(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117... 152 6e-35
AM236080_4544(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 152 6e-35
CP001408_3607(CP001408|pid:none) Burkholderia pseudomallei MSHR3... 152 8e-35
CP000867_200(CP000867|pid:none) Methanococcus maripaludis C6, co... 152 8e-35
AM422018_825(AM422018|pid:none) Candidatus Phytoplasma australie... 152 8e-35
CP000609_883(CP000609|pid:none) Methanococcus maripaludis C5, co... 152 8e-35
CP000009_188(CP000009|pid:none) Gluconobacter oxydans 621H, comp... 152 8e-35
(Q4UKH4) RecName: Full=Signal recognition particle protein; AltN... 151 1e-34
CP000237_520(CP000237|pid:none) Neorickettsia sennetsu strain Mi... 151 1e-34
CP000053_1106(CP000053|pid:none) Rickettsia felis URRWXCal2, com... 151 1e-34
CP000270_3879(CP000270|pid:none) Burkholderia xenovorans LB400 c... 151 1e-34
AE009439_1613(AE009439|pid:none) Methanopyrus kandleri AV19, com... 151 1e-34
CP000683_168(CP000683|pid:none) Rickettsia massiliae MTU5, compl... 150 2e-34
CP000352_3080(CP000352|pid:none) Ralstonia metallidurans CH34, c... 150 2e-34
CP001096_244(CP001096|pid:none) Rhodopseudomonas palustris TIE-1... 150 2e-34
CP000774_1415(CP000774|pid:none) Parvibaculum lavamentivorans DS... 150 2e-34
CP000086_1136(CP000086|pid:none) Burkholderia thailandensis E264... 150 3e-34
CP000849_289(CP000849|pid:none) Rickettsia bellii OSU 85-389, co... 150 3e-34
CP001191_3709(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 150 3e-34
CP000264_757(CP000264|pid:none) Jannaschia sp. CCS1, complete ge... 150 3e-34
AD3280(AD3280) signal recognition particle, chain ffh/srp54 [imp... 150 3e-34
CP000115_2764(CP000115|pid:none) Nitrobacter winogradskyi Nb-255... 150 3e-34
CP000283_508(CP000283|pid:none) Rhodopseudomonas palustris BisB5... 150 3e-34
CP000708_1614(CP000708|pid:none) Brucella ovis ATCC 25840 chromo... 150 3e-34
AE014291_1769(AE014291|pid:none) Brucella suis 1330 chromosome I... 149 4e-34
CP000409_190(CP000409|pid:none) Rickettsia canadensis str. McKie... 149 4e-34
CP000238_177(CP000238|pid:none) Baumannia cicadellinicola str. H... 149 4e-34
CP000440_489(CP000440|pid:none) Burkholderia ambifaria AMMD chro... 149 5e-34
CP000263_227(CP000263|pid:none) Buchnera aphidicola str. Cc (Cin... 149 5e-34
CP001099_1797(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 149 5e-34
(O07347) RecName: Full=Signal recognition particle protein; AltN... 149 7e-34
CP000633_3085(CP000633|pid:none) Agrobacterium vitis S4 chromoso... 148 9e-34
A72117(A72117) signal recognition particle GTPase - Chlamydophil... 148 9e-34
CP000614_550(CP000614|pid:none) Burkholderia vietnamiensis G4 ch... 148 9e-34
CP000884_1506(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 148 9e-34
CP000958_557(CP000958|pid:none) Burkholderia cenocepacia MC0-3 c... 148 9e-34
AL646052_2809(AL646052|pid:none) Ralstonia solanacearum GMI1000 ... 148 9e-34
CP000250_352(CP000250|pid:none) Rhodopseudomonas palustris HaA2,... 148 9e-34
AE002161_647(AE002161|pid:none) Chlamydophila pneumoniae AR39, c... 148 9e-34
>(Q75K18) RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54; &AC114258_13(AC114258|pid:none)
Length = 542
Score = 702 bits (1812), Expect = 0.0
Identities = 373/462 (80%), Positives = 373/462 (80%)
Frame = +2
Query: 1118 DELIRLLDPGVPLWKPTKGKSNIVMFVGLQGAGKTTSVTKLAYFYKKKGFSTAIVCADTF 1297
DELIRLLDPGVPLWKPTKGKSNIVMFVGLQGAGKTTSVTKLAYFYKKKGFSTAIVCADTF
Sbjct: 81 DELIRLLDPGVPLWKPTKGKSNIVMFVGLQGAGKTTSVTKLAYFYKKKGFSTAIVCADTF 140
Query: 1298 RAGAFDQVRHNAAKAKIHYYGSETEKDPVVVARTGVDIFKKDGTEIIIVDTSGRHKQDSE 1477
RAGAFDQVRHNAAKAKIHYYGSETEKDPVVVARTGVDIFKKDGTEIIIVDTSGRHKQDSE
Sbjct: 141 RAGAFDQVRHNAAKAKIHYYGSETEKDPVVVARTGVDIFKKDGTEIIIVDTSGRHKQDSE 200
Query: 1478 LFEEMKQIETAVKPDNCIFVMDSSIGQAAYEQATAFRSSVKVGSIIITKMDGNSMGGGAI 1657
LFEEMKQIETAVKPDNCIFVMDSSIGQAAYEQATAFRSSVKVGSIIITKMDGNSMGGGAI
Sbjct: 201 LFEEMKQIETAVKPDNCIFVMDSSIGQAAYEQATAFRSSVKVGSIIITKMDGNSMGGGAI 260
Query: 1658 SAVAATNTPIIFIGTGEHLTDLELFDPSTFVSKLLGYGDMKGMLEKIKEVIPEDSTSLKE 1837
SAVAATNTPIIFIGTGEHLTDLELFDPSTFVSKLLGYGDMKGMLEKIKEVIPEDSTSLKE
Sbjct: 261 SAVAATNTPIIFIGTGEHLTDLELFDPSTFVSKLLGYGDMKGMLEKIKEVIPEDSTSLKE 320
Query: 1838 IAQGKFTLRSXXXXXXXXXXLGPIDKLVQMIPGMNQLPQLQGNEGGLKLKAYINILDSLS 2017
IAQGKFTLRS LGPIDKLVQMIPGMNQLPQLQGNEGGLKLKAYINILDSLS
Sbjct: 321 IAQGKFTLRSMQQQFQQIMQLGPIDKLVQMIPGMNQLPQLQGNEGGLKLKAYINILDSLS 380
Query: 2018 EKELDGKKPITQKRIITIAQGSGRHPNEVVELLEQHKTFEXXXXXXXXXXXXXXXXXXXX 2197
EKELDGKKPITQKRIITIAQGSGRHPNEVVELLEQHKTFE
Sbjct: 381 EKELDGKKPITQKRIITIAQGSGRHPNEVVELLEQHKTFEKLIGKGGPGGGLGSLMAGKG 440
Query: 2198 XPKNMEQAMKQMNANGGMQGLMNSLKGMXXXXXXXXXXXXXXXXXXXXXXXXDLAKXXXX 2377
PKNMEQAMKQMNANGGMQGLMNSLKGM DLAK
Sbjct: 441 GPKNMEQAMKQMNANGGMQGLMNSLKGMGGMGDLAKMFGGGGGGGGGMPSMGDLAKMMGG 500
Query: 2378 XXXXXXXXXXXXXXXDLXXXXXXXXXXXXXXXQNGFPNLDLD 2503
DL QNGFPNLDLD
Sbjct: 501 MGGGGRGGGGMPNMGDLAKMMGGMGGGAGKGGQNGFPNLDLD 542
Score = 359 bits (921), Expect = 3e-97
Identities = 184/184 (100%), Positives = 184/184 (100%)
Frame = +1
Query: 124 MVLADLGNQLSSALRSLNETTIVNEDTINQLLKEVGNALSKSDVSMSLIIQMRKNIKDKI 303
MVLADLGNQLSSALRSLNETTIVNEDTINQLLKEVGNALSKSDVSMSLIIQMRKNIKDKI
Sbjct: 1 MVLADLGNQLSSALRSLNETTIVNEDTINQLLKEVGNALSKSDVSMSLIIQMRKNIKDKI 60
Query: 304 KLDQMAAGLNKRKIIKQVVFDELIRLLDPGVPLWKPTKGKSNIVMFVGLQGAGKTTSVTK 483
KLDQMAAGLNKRKIIKQVVFDELIRLLDPGVPLWKPTKGKSNIVMFVGLQGAGKTTSVTK
Sbjct: 61 KLDQMAAGLNKRKIIKQVVFDELIRLLDPGVPLWKPTKGKSNIVMFVGLQGAGKTTSVTK 120
Query: 484 LAYFYKKKGFSTAIVCADTFRAGAFDQVRHNAAKAKIHYYGSETEKDPVVVARTGVDIFK 663
LAYFYKKKGFSTAIVCADTFRAGAFDQVRHNAAKAKIHYYGSETEKDPVVVARTGVDIFK
Sbjct: 121 LAYFYKKKGFSTAIVCADTFRAGAFDQVRHNAAKAKIHYYGSETEKDPVVVARTGVDIFK 180
Query: 664 KDGT 675
KDGT
Sbjct: 181 KDGT 184
Score = 76.6 bits (187), Expect = 4e-12
Identities = 50/130 (38%), Positives = 51/130 (39%)
Frame = +2
Query: 668 MEQHKTFEXXXXXXXXXXXXXXXXXXXXXPKNMEQAMKQMNANGGMQGLMNSLKGMXXXX 847
+EQHKTFE PKNMEQAMKQMNANGGMQGLMNSLKGM
Sbjct: 413 LEQHKTFEKLIGKGGPGGGLGSLMAGKGGPKNMEQAMKQMNANGGMQGLMNSLKGMGGMG 472
Query: 848 XXXXXXXXXXXXXXXXXXXXDLAKXXXXXXXXXXXXXXXXXXXDLXXXXXXXXXXXXXXX 1027
DLAK DL
Sbjct: 473 DLAKMFGGGGGGGGGMPSMGDLAKMMGGMGGGGRGGGGMPNMGDLAKMMGGMGGGAGKGG 532
Query: 1028 QNGFPNLDLD 1057
QNGFPNLDLD
Sbjct: 533 QNGFPNLDLD 542
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 3,752,674,397
Number of extensions: 72587126
Number of successful extensions: 220897
Number of sequences better than 10.0: 1338
Number of HSP's gapped: 218639
Number of HSP's successfully gapped: 2569
Length of query: 898
Length of database: 1,040,966,779
Length adjustment: 138
Effective length of query: 760
Effective length of database: 598,775,449
Effective search space: 455069341240
Effective search space used: 455069341240
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
4 |
| AH (FL, L) |
2 |
| AF (FL, S) |
1 |
| SL (DIR, L) |
3 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
1 |
| CH (FL, L) |
0 |
| CF (FL, S) |
4 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |