Contig-U10930-1
Contig ID Contig-U10930-1
Contig update 2002.12.18
Contig sequence
>Contig-U10930-1 (Contig-U10930-1Q) /CSM_Contig/Contig-U10930-1Q.Seq.d
ATCATCACAGATTATCATTTTTTTTTATTTTATTAATTTTTTTTTTATTT
GTATATTTATAAAGAAAAAGGAGGAAAATATATTGTATATATTTTTTGTA
GAATAAATAAATTATAGAAATGTTATCATCAGCATTAAAATTAACTAAAA
AAGTTTGCTCAACCAAATCAAATGGATTAATTAGAAGTTTTTCAACACAA
ACTCAAAGTAGAGATTATGCAGTTGTAGATCATACATATGATGCAATTGT
TGTTGGTGCAGGTGGTGCAGGTCTTAGAGCAGCCTTAGGTTTAACAGAAA
AAGGTTACAAGACAGCATGTATCACTAAATTATTCCCAACTCGTTCCCAT
ACAGTCGCAGCACAAGGTGGTATTAATGCTGCTTTAGGAAATGCAGATCA
AGATGATTGGAGATGGCACGCATATGATACAGTAAAGGGAAGTGATTTTT
TAGGTGATCAAGACGCCATTCATTACATGTGTAAAGAAGCAGTTCCAACC
GTTTTAGAATTAGAACAATATGGTGTACCATTCTCACGTATGGATGATGG
TCGTATCTATCAAAGAGCATTCGGTGGTCAAAGTAAAAATTTTGGTAAAG
GTGGTCACGCAACTCGTTGTTGTGCTGCTGCAGATCGTACAGGTCATGCT
CTCTTACACACTCTCTATGGTCAAGCCGTTAAACATAACACAAAATTCTT
CATTGAGTATTTTGTAACTGATCTCATTATGGAAAATGGGGAT-------
---GATTTCGCTGGTGTCGATGTCACCAAAGAACCAATTCCAGTCATTCC
AACCGTTCATTACAATATGGGTGGTATTCCAACCAACTACAAAGGTCAAG
TCATCACTCAAGTCGATGGTAAAGATAAATTAGTCAAAGGTCTTTATGCC
GCCGGTGAATCTGCTTGTGTCTCTGTCCATGGTGCCAATCGTTTAGGTGC
CAACTCTCTATTGGATATCGTTGTCTTTGGTAGAGCTGTAGCCAATGAAA
TCGAAAATACCCTCGCCAAGGATACCCCACACAAACCATTACCACCAAAT
GCTGGTGAAGAATCAATTGCAAATATTGATGCCATTCGTTTCTCTAATGG
TACTCGTTCAACCGCTGAAATTCGTTTAGAGATGCAAAAGATTATGCAAA
GAAATGCTGCCGTCTTTAGAGATGGTCAAGTCTTAAAGGAAGGTGTTGAA
TTAATTGATAAATGTGCTCGTTCACTCATAAATGATCTCAAAACCACCGA
TCGTACCATGATTTGGAATACCGATTTAATCGAATCATTAGAACTCCAAA
ATCTTATGACTCAAGCCGTCCTCACTATGCACTCTGCTGAAGCACGTAAA
GAAAGTCGTGGTGCTCATGCTCGTGAAGATTACAAAGAAAGAGATGATGC
CAACTGGATGAAACATACCTTATCCTATTTAGATGTTAATACTGGTAAAG
TTACCCTTAACTATCGTCCAGTAGTTTCTGAAACTTTAGATCAATCGAAA
GGAAACTATTAAACCATTCAAGAGAGTTTATAAAGAG

Gap gap included
Contig length 1527
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 3507523
End point 3509055
Strand (PLUS/MINUS) PLUS
Number of clones 17
Number of EST 24
Link to clone list U10930
List of clone(s)

est1=AFK828F,1,511
est2=VHI325F,4,603
est3=VHI140F,17,506
est4=AFN559F,84,670
est5=VFJ349F,92,364
est6=SFK519F,174,744
est7=AFI160F,565,706
est8=AHD463Z,745,1527
est9=AFE372Z,776,1527
est10=AFN559Z,776,1520
est11=VFJ349Z,776,1520
est12=SFK519Z,777,1516
est13=AFI160Z,779,1487
est14=AFL443Z,834,1487
est15=VHP153Z,834,1531
est16=AFK828Z,879,1527
est17=AFD296Z,888,1519
est18=VFK559Z,889,1519
est19=VHI325Z,906,1327
est20=CHP176Z,952,1430
est21=VFE678Z,993,1530
est22=VHB770Z,1075,1369
est23=VHI140Z,1077,1195
est24=VHQ433Z,1208,1352
Translated Amino Acid sequence
hhrlsfffillifflfvyl*rkrrkiyciyfl*nk*IIEMLSSALKLTKKVCSTKSNGLI
RSFSTQTQSRDYAVVDHTYDAIVVGAGGAGLRAALGLTEKGYKTACITKLFPTRSHTVAA
QGGINAALGNADQDDWRWHAYDTVKGSDFLGDQDAIHYMCKEAVPTVLELEQYGVPFSRM
DDGRIYQRAFGGQSKNFGKGGHATRCCAAADRTGHALLHTLYGQAVKHNTKFFIEYFVTD
LIMENGD---

---DFAGVDVTKEPIPVIPTVHYNMGGIPTNYKGQVITQVDGKDKLVKGLYAAGESACVS
VHGANRLGANSLLDIVVFGRAVANEIENTLAKDTPHKPLPPNAGEESIANIDAIRFSNGT
RSTAEIRLEMQKIMQRNAAVFRDGQVLKEGVELIDKCARSLINDLKTTDRTMIWNTDLIE
SLELQNLMTQAVLTMHSAEARKESRGAHAREDYKERDDANWMKHTLSYLDVNTGKVTLNY
RPVVSETLDQSKGNY*tiqesl*r


Translated Amino Acid sequence (All Frames)
Frame A:
iitdyhfflfy*fffylyiykekggkyivyifcrinkl*kcyhqh*n*lkkfaqpnqmd*
levfqhklkveimql*iihmmqlllvqvvqvleqp*v*qkkvtrqhvslnysqlvpiqsq
hkvvlmll*emqikmigdgthmiq*revif*viktpfitcvkkqfqpf*n*nnmvyhshv
wmmvvsikehsvvkvkilvkvvtqlvvvllqivqvmlsytlsmvkplnitqnsslsil*l
islwkmg---

---DFAGVDVTKEPIPVIPTVHYNMGGIPTNYKGQVITQVDGKDKLVKGLYAAGESACVS
VHGANRLGANSLLDIVVFGRAVANEIENTLAKDTPHKPLPPNAGEESIANIDAIRFSNGT
RSTAEIRLEMQKIMQRNAAVFRDGQVLKEGVELIDKCARSLINDLKTTDRTMIWNTDLIE
SLELQNLMTQAVLTMHSAEARKESRGAHAREDYKERDDANWMKHTLSYLDVNTGKVTLNY
RPVVSETLDQSKGNY*tiqesl*r

Frame B:
ssqiiiffyfinffficifikkkeenilyiffve*inyrnviisikin*ksllnqikwin
*kffntnsk*rlcscrsyi*cnccwcrwcrs*sslrfnrkrlqdsmyh*iipnsfpysrs
trwy*ccfrkcrsr*lemari*yskgk*ffr*srrhslhv*rsssnrfrirtiwctilty
g*wsylsksirwsk*kfw*rwsrnsllcccrsyrscslthslwssr*t*hkilh*vfcn*
shygkwg---

---islvsmspknqfqsfqpfitiwvvfqpttkvksslksmvkin*skvfmppvnllvsl
smvpiv*vptlywislslvel*pmkskipspriphtnhyhqmlvknqlqilmpfvslmvl
vqplkfv*rckrlckemlpslemvks*rkvln*linvlvhs*miskppivp*fgipi*sn
h*nskil*lkpsslctllkhvkkvvvlmlvkitkkemmptg*nipypi*mlilvklplti
vq*flkl*inrketikpfkrvyke

Frame C:
hhrlsfffillifflfvyl*rkrrkiyciyfl*nk*IIEMLSSALKLTKKVCSTKSNGLI
RSFSTQTQSRDYAVVDHTYDAIVVGAGGAGLRAALGLTEKGYKTACITKLFPTRSHTVAA
QGGINAALGNADQDDWRWHAYDTVKGSDFLGDQDAIHYMCKEAVPTVLELEQYGVPFSRM
DDGRIYQRAFGGQSKNFGKGGHATRCCAAADRTGHALLHTLYGQAVKHNTKFFIEYFVTD
LIMENGD---

---frwcrchqrtnsshsnrslqygwysnqlqrsshhssrw*r*isqrslcrr*iclclc
pwcqsfrcqlsigyrclw*scsq*nrkyprqgyptqtittkcw*rincky*chsfl*wys
fnr*nsfrdakdyakkccrl*rwsslkgrc*in**mcsfthk*sqnhrsyhdleyrfnri
irtpksydssrphyalc*st*rkswcscs*rlqrkr*cqldetylilfrc*yw*syp*ls
sssf*nfrsierkllnhsrefik

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U10930-1 (Contig-U10930-1Q)
/CSM_Contig/Contig-U10930-1Q.Seq.d
(1537 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U10930-1 (Contig-U10930-1Q) /CSM_Contig/Conti... 2896 0.0
Contig-U14745-1 (Contig-U14745-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U09012-1 (Contig-U09012-1Q) /CSM_Contig/Conti... 38 0.028
Contig-U01982-1 (Contig-U01982-1Q) /CSM_Contig/Conti... 38 0.028
Contig-U11084-1 (Contig-U11084-1Q) /CSM_Contig/Conti... 36 0.11
Contig-U07244-1 (Contig-U07244-1Q) /CSM_Contig/Conti... 36 0.11
Contig-U02967-1 (Contig-U02967-1Q) /CSM_Contig/Conti... 36 0.11
Contig-U14188-1 (Contig-U14188-1Q) /CSM_Contig/Conti... 34 0.43
Contig-U13829-1 (Contig-U13829-1Q) /CSM_Contig/Conti... 34 0.43
Contig-U12887-1 (Contig-U12887-1Q) /CSM_Contig/Conti... 34 0.43

>Contig-U10930-1 (Contig-U10930-1Q) /CSM_Contig/Contig-U10930-1Q.Seq.d
Length = 1537

Score = 2896 bits (1461), Expect = 0.0
Identities = 1491/1491 (100%)
Strand = Plus / Plus


Query: 47 atttgtatatttataaagaaaaaggaggaaaatatattgtatatattttttgtagaataa 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 atttgtatatttataaagaaaaaggaggaaaatatattgtatatattttttgtagaataa 106


Query: 107 ataaattatagaaatgttatcatcagcattaaaattaactaaaaaagtttgctcaaccaa 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 ataaattatagaaatgttatcatcagcattaaaattaactaaaaaagtttgctcaaccaa 166


Query: 167 atcaaatggattaattagaagtttttcaacacaaactcaaagtagagattatgcagttgt 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 atcaaatggattaattagaagtttttcaacacaaactcaaagtagagattatgcagttgt 226


Query: 227 agatcatacatatgatgcaattgttgttggtgcaggtggtgcaggtcttagagcagcctt 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 agatcatacatatgatgcaattgttgttggtgcaggtggtgcaggtcttagagcagcctt 286


Query: 287 aggtttaacagaaaaaggttacaagacagcatgtatcactaaattattcccaactcgttc 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 aggtttaacagaaaaaggttacaagacagcatgtatcactaaattattcccaactcgttc 346


Query: 347 ccatacagtcgcagcacaaggtggtattaatgctgctttaggaaatgcagatcaagatga 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ccatacagtcgcagcacaaggtggtattaatgctgctttaggaaatgcagatcaagatga 406


Query: 407 ttggagatggcacgcatatgatacagtaaagggaagtgattttttaggtgatcaagacgc 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ttggagatggcacgcatatgatacagtaaagggaagtgattttttaggtgatcaagacgc 466


Query: 467 cattcattacatgtgtaaagaagcagttccaaccgttttagaattagaacaatatggtgt 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 cattcattacatgtgtaaagaagcagttccaaccgttttagaattagaacaatatggtgt 526


Query: 527 accattctcacgtatggatgatggtcgtatctatcaaagagcattcggtggtcaaagtaa 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 accattctcacgtatggatgatggtcgtatctatcaaagagcattcggtggtcaaagtaa 586


Query: 587 aaattttggtaaaggtggtcacgcaactcgttgttgtgctgctgcagatcgtacaggtca 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 aaattttggtaaaggtggtcacgcaactcgttgttgtgctgctgcagatcgtacaggtca 646


Query: 647 tgctctcttacacactctctatggtcaagccgttaaacataacacaaaattcttcattga 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tgctctcttacacactctctatggtcaagccgttaaacataacacaaaattcttcattga 706


Query: 707 gtattttgtaactgatctcattatggaaaatggggatnnnnnnnnnngatttcgctggtg 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 gtattttgtaactgatctcattatggaaaatggggatnnnnnnnnnngatttcgctggtg 766


Query: 767 tcgatgtcaccaaagaaccaattccagtcattccaaccgttcattacaatatgggtggta 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 tcgatgtcaccaaagaaccaattccagtcattccaaccgttcattacaatatgggtggta 826


Query: 827 ttccaaccaactacaaaggtcaagtcatcactcaagtcgatggtaaagataaattagtca 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 ttccaaccaactacaaaggtcaagtcatcactcaagtcgatggtaaagataaattagtca 886


Query: 887 aaggtctttatgccgccggtgaatctgcttgtgtctctgtccatggtgccaatcgtttag 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 aaggtctttatgccgccggtgaatctgcttgtgtctctgtccatggtgccaatcgtttag 946


Query: 947 gtgccaactctctattggatatcgttgtctttggtagagctgtagccaatgaaatcgaaa 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 gtgccaactctctattggatatcgttgtctttggtagagctgtagccaatgaaatcgaaa 1006


Query: 1007 ataccctcgccaaggataccccacacaaaccattaccaccaaatgctggtgaagaatcaa 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 ataccctcgccaaggataccccacacaaaccattaccaccaaatgctggtgaagaatcaa 1066


Query: 1067 ttgcaaatattgatgccattcgtttctctaatggtactcgttcaaccgctgaaattcgtt 1126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1067 ttgcaaatattgatgccattcgtttctctaatggtactcgttcaaccgctgaaattcgtt 1126


Query: 1127 tagagatgcaaaagattatgcaaagaaatgctgccgtctttagagatggtcaagtcttaa 1186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1127 tagagatgcaaaagattatgcaaagaaatgctgccgtctttagagatggtcaagtcttaa 1186


Query: 1187 aggaaggtgttgaattaattgataaatgtgctcgttcactcataaatgatctcaaaacca 1246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1187 aggaaggtgttgaattaattgataaatgtgctcgttcactcataaatgatctcaaaacca 1246


Query: 1247 ccgatcgtaccatgatttggaataccgatttaatcgaatcattagaactccaaaatctta 1306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1247 ccgatcgtaccatgatttggaataccgatttaatcgaatcattagaactccaaaatctta 1306


Query: 1307 tgactcaagccgtcctcactatgcactctgctgaagcacgtaaagaaagtcgtggtgctc 1366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1307 tgactcaagccgtcctcactatgcactctgctgaagcacgtaaagaaagtcgtggtgctc 1366


Query: 1367 atgctcgtgaagattacaaagaaagagatgatgccaactggatgaaacataccttatcct 1426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1367 atgctcgtgaagattacaaagaaagagatgatgccaactggatgaaacataccttatcct 1426


Query: 1427 atttagatgttaatactggtaaagttacccttaactatcgtccagtagtttctgaaactt 1486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1427 atttagatgttaatactggtaaagttacccttaactatcgtccagtagtttctgaaactt 1486


Query: 1487 tagatcaatcgaaaggaaactattaaaccattcaagagagtttataaagag 1537
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1487 tagatcaatcgaaaggaaactattaaaccattcaagagagtttataaagag 1537


Score = 34.2 bits (17), Expect = 0.43
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 1 atcatcacagattatca 17
|||||||||||||||||
Sbjct: 1 atcatcacagattatca 17


>Contig-U14745-1 (Contig-U14745-1Q) /CSM_Contig/Contig-U14745-1Q.Seq.d
Length = 1780

Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus


Query: 246 attgttgttggtgcaggtggtgcaggt 272
||||||||||||||||||| |||||||
Sbjct: 239 attgttgttggtgcaggtgttgcaggt 265


>Contig-U09012-1 (Contig-U09012-1Q) /CSM_Contig/Contig-U09012-1Q.Seq.d
Length = 1245

Score = 38.2 bits (19), Expect = 0.028
Identities = 22/23 (95%)
Strand = Plus / Minus


Query: 702 attgagtattttgtaactgatct 724
|||||||||||||||| ||||||
Sbjct: 66 attgagtattttgtaaatgatct 44


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,999
Number of Sequences: 6905
Number of extensions: 15999
Number of successful extensions: 1590
Number of sequences better than 10.0: 169
length of query: 1537
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1521
effective length of database: 5,564,391
effective search space: 8463438711
effective search space used: 8463438711
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.22
Homology vs DNA
Query= Contig-U10930-1 (Contig-U10930-1Q) /CSM_Contig/Contig-U10930-1Q.Seq.d
(1537 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ349798) Dictyostelium discoideum cDNA clone:dda37n16, 3' ... 1511 0.0 2
(BJ342154) Dictyostelium discoideum cDNA clone:dda9p17, 3' e... 1471 0.0 1
(AF211482) Dictyostelium discoideum SdhA (sdhA) gene, comple... 1469 0.0 2
(BJ345703) Dictyostelium discoideum cDNA clone:dda28e15, 3' ... 1463 0.0 1
(BJ432704) Dictyostelium discoideum cDNA clone:ddv19b13, 3' ... 1441 0.0 1
(BJ343905) Dictyostelium discoideum cDNA clone:dda17g15, 3' ... 1370 0.0 2
(BJ343200) Dictyostelium discoideum cDNA clone:dda22h08, 3' ... 1267 0.0 1
(BJ401069) Dictyostelium discoideum cDNA clone:dds22e05, 3' ... 1259 0.0 3
(BJ446084) Dictyostelium discoideum cDNA clone:ddv61i13, 3' ... 1257 0.0 2
(BJ433656) Dictyostelium discoideum cDNA clone:ddv22e15, 3' ... 1237 0.0 1
(BJ341733) Dictyostelium discoideum cDNA clone:dda7o24, 3' e... 1231 0.0 1
(BJ345316) Dictyostelium discoideum cDNA clone:dda23f12, 3' ... 1219 0.0 3
(BJ390333) Dictyostelium discoideum cDNA clone:dds22e05, 5' ... 1122 0.0 1
(BJ328535) Dictyostelium discoideum cDNA clone:dda28e15, 5' ... 1088 0.0 1
(BJ428139) Dictyostelium discoideum cDNA clone:ddv10k20, 3' ... 981 0.0 2
(BJ422852) Dictyostelium discoideum cDNA clone:ddv47b07, 5' ... 906 0.0 1
(BJ383379) Dictyostelium discoideum cDNA clone:ddc52g19, 3' ... 702 0.0 2
(BJ441606) Dictyostelium discoideum cDNA clone:ddv47b07, 3' ... 801 0.0 1
(BJ327949) Dictyostelium discoideum cDNA clone:dda22h08, 5' ... 755 0.0 2
(BJ422915) Dictyostelium discoideum cDNA clone:ddv47o09, 5' ... 690 0.0 1
(BJ414530) Dictyostelium discoideum cDNA clone:ddv19b13, 5' ... 476 e-129 1
(BJ437565) Dictyostelium discoideum cDNA clone:ddv34l17, 3' ... 283 e-101 2
(BJ326677) Dictyostelium discoideum cDNA clone:dda17g15, 5' ... 262 4e-65 1
(BJ446604) Dictyostelium discoideum cDNA clone:ddv63b10, 3' ... 127 7e-45 2
(BJ441666) Dictyostelium discoideum cDNA clone:ddv47o09, 3' ... 168 4e-37 1
(EL838503) CBXT1134.g1 NICHD_XGC_trop_25 Xenopus (Silurana) ... 113 1e-32 3
(DY890224) CeleSEQ8750 Cunninghamella elegans pBluescript (E... 76 1e-30 6
(DY891429) CeleSEQ10116 Cunninghamella elegans pBluescript (... 76 3e-30 6
(AR548014) Sequence 3145 from patent US 6747137. 66 5e-30 4
(DY334178) OB_MEa0010K22.f OB_MEa Ocimum basilicum cDNA clon... 76 3e-28 4
(DY334179) OB_MEa0010K22.r OB_MEa Ocimum basilicum cDNA clon... 76 3e-28 4
(BT005938) Arabidopsis thaliana At2g18450 gene, complete cds. 54 6e-28 6
(FE238660) CAPG4965.fwd CAPG Naegleria gruberi amoeba stage ... 68 7e-28 4
(AK119142) Arabidopsis thaliana At2g18450 mRNA for putative ... 54 8e-28 6
(FE244657) CAPG8316.fwd CAPG Naegleria gruberi amoeba stage ... 68 9e-28 4
(FE238465) CAPG4869.fwd CAPG Naegleria gruberi amoeba stage ... 68 1e-27 4
(FE235830) CAPG3570.fwd CAPG Naegleria gruberi amoeba stage ... 68 1e-27 4
(EC999675) ROE00003646 Rhizopus oryzae Company Rhizopus oryz... 90 4e-27 2
(AL436134) T7 end of clone BC0AA001F01 of library BC0AA from... 111 3e-26 2
(FE237222) CAPG4272.fwd CAPG Naegleria gruberi amoeba stage ... 68 5e-26 4
(D89263) Schizosaccharomyces pombe mRNA, partial cds, clone:... 60 1e-24 5
(AJ555233) Kluyveromyces lactis sdh1 gene for flavoprotein s... 48 3e-24 10
(EE006748) ROE00001916 Rhizopus oryzae Company Rhizopus oryz... 62 5e-24 5
(DQ674551) Coccidioides posadasii succinate dehydrogenase mR... 84 1e-23 4
(CR382137) Debaryomyces hansenii chromosome E of strain CBS7... 111 6e-23 2
(CZ284545) cp36b08.f Candida parapsilosis Random Genomic Lib... 86 9e-23 2
(AY124812) Arabidopsis thaliana AT5g66760/MSN2_16 mRNA, comp... 66 4e-22 7
(AX651968) Sequence 854 from Patent WO03000898. 66 4e-22 7
(AX506957) Sequence 1652 from Patent WO0216655. 66 4e-22 7
(AX412428) Sequence 192 from Patent WO0222675. 66 4e-22 7
(AF367341) Arabidopsis thaliana AT5g66760/MSN2_16 mRNA, comp... 66 5e-22 7
(AF436833) Arabidopsis thaliana AT5g66760/MSN2_16 mRNA, comp... 66 6e-22 7
(AJ001809) Arabidopsis thaliana mRNA for Succinate dehydroge... 66 9e-22 7
(AY045674) Arabidopsis thaliana AT5g66760/MSN2_16 mRNA, comp... 66 9e-22 7
(CV097131) FAMU_USDA_FP_5154 Vitis shuttleworthii L., grape ... 62 6e-21 3
(EJ718228) 1092959436123 Global-Ocean-Sampling_GS-30-02-01-1... 52 6e-21 7
(BG446350) GA__Eb0034C12f Gossypium arboreum 7-10 dpa fiber ... 64 7e-21 3
(EG696445) RCSBY18TP Castor bean cDNA library from seeds (12... 72 9e-21 4
(EG691668) RCSAK50TP Castor bean cDNA library from seeds (12... 72 1e-20 4
(EE009154) ROE00005159 Rhizopus oryzae Company Rhizopus oryz... 62 1e-20 4
(BM399668) 5009-0-6-G12.t.1 Chilcoat/Turkewitz cDNA (large f... 64 1e-20 5
(EJ333615) 1092963458703 Global-Ocean-Sampling_GS-28-01-01-1... 52 1e-20 7
(DT935469) BAAC-PNP1281A16.g1 C.remanei EST SB146 Caenorhabd... 113 2e-20 1
(CO007308) EST795643 Coccidioides posadasii spherule cDNA li... 84 2e-20 2
(CN591613) TTE00013892 Normalized large Tetrahymena thermoph... 64 4e-20 5
(CT779870) Paramecium tetraurelia 5-PRIME EST from clone LK0... 58 4e-20 4
(CT810097) Paramecium tetraurelia 5-PRIME EST from clone LK0... 58 4e-20 4
(FF566598) TTBA315TV Tetrahymena thermophila CU428 log phase... 64 4e-20 5
(BM399669) 5009-0-6-G12.t.2 Chilcoat/Turkewitz cDNA (large f... 64 5e-20 5
(CT802639) Paramecium tetraurelia 5-PRIME EST from clone LK0... 58 5e-20 4
(FF569667) TTBCI66TV Tetrahymena thermophila CU428 log phase... 64 5e-20 5
(FF566597) TTBA315TG Tetrahymena thermophila CU428 log phase... 64 5e-20 5
(CN596806) TTE00006432 Normalized large Tetrahymena thermoph... 64 6e-20 5
(BQ404796) GA__Ed0074H11f Gossypium arboreum 7-10 dpa fiber ... 54 6e-20 4
(EJ815206) 1093017511970 Global-Ocean-Sampling_GS-30-02-01-1... 44 8e-20 7
(CT821597) Paramecium tetraurelia 5-PRIME EST from clone LK0... 70 1e-19 3
(EJ107998) 1092343144225 Global-Ocean-Sampling_GS-27-01-01-1... 58 1e-19 6
(EE065045) C2B02580 Buds/little clusters (VvC2) Vitis vinife... 62 1e-19 3
(CT788933) Paramecium tetraurelia 5-PRIME EST from clone LK0... 70 2e-19 3
(CT807333) Paramecium tetraurelia 5-PRIME EST from clone LK0... 70 2e-19 3
(EU192129) Issatchenkia orientalis succinate dehydrogenase f... 98 2e-19 3
(CT761559) Paramecium tetraurelia 5-PRIME EST from clone LK0... 70 2e-19 3
(CT779551) Paramecium tetraurelia 5-PRIME EST from clone LK0... 70 2e-19 3
(EJ451577) 1093015428241 Global-Ocean-Sampling_GS-28-01-01-1... 44 3e-19 7
(EJ797989) 1093017411074 Global-Ocean-Sampling_GS-30-02-01-1... 44 3e-19 7
(DY329180) OB_MEa0003N16.r OB_MEa Ocimum basilicum cDNA clon... 60 4e-19 4
(EE097871) S9B01446 Ripening Berries (VvS9) Vitis vinifera c... 56 5e-19 3
(DY329179) OB_MEa0003N16.f OB_MEa Ocimum basilicum cDNA clon... 60 6e-19 4
(AY598348) Anaplasma phagocytophilum succinate dehydrogenase... 54 1e-18 6
(DB924126) Manihot esculenta mRNA, clone: CAS01_012_F04, 5'end. 72 1e-18 3
(CO107683) GR__Eb0039A15.r GR__Eb Gossypium raimondii cDNA c... 56 2e-18 4
(EJ014554) 1095433012682 Global-Ocean-Sampling_GS-26-01-01-1... 44 2e-18 7
(CX299680) C07001A08SK NTLeaf1 Citrus clementina cDNA clone ... 56 2e-18 4
(EL907771) INIT2_20_G10.g1_A006 G5 trophont cDNA (INIT2) Ich... 96 2e-18 2
(CO101058) GR__Eb0027B19.r GR__Eb Gossypium raimondii cDNA c... 56 2e-18 4
(CO122377) GR__Eb03P11.f GR__Eb Gossypium raimondii cDNA clo... 56 2e-18 4
(CT765514) Paramecium tetraurelia 5-PRIME EST from clone LK0... 50 2e-18 6
(EL913291) INIT2_59_A09.g2_A006 G5 trophont cDNA (INIT2) Ich... 96 3e-18 2
(EL910403) INIT2_39_B01.g1_A006 G5 trophont cDNA (INIT2) Ich... 96 3e-18 2
(DY525333) BAAC-PNP1302P08.g1 C.remanei EST SB146 Caenorhabd... 105 5e-18 2

>(BJ349798) Dictyostelium discoideum cDNA clone:dda37n16, 3' end,
single read.
Length = 784

Score = 1511 bits (762), Expect(2) = 0.0
Identities = 766/768 (99%)
Strand = Plus / Minus


Query: 755 atttcgctggtgtcgatgtcaccaaagaaccaattccagtcattccaaccgttcattaca 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 atttcgctggtgtcgatgtcaccaaagaaccaattccagtcattccaaccgttcattaca 724


Query: 815 atatgggtggtattccaaccaactacaaaggtcaagtcatcactcaagtcgatggtaaag 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 atatgggtggtattccaaccaactacaaaggtcaagtcatcactcaagtcgatggtaaag 664


Query: 875 ataaattagtcaaaggtctttatgccgccggtgaatctgcttgtgtctctgtccatggtg 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ataaattagtcaaaggtctttatgccgccggtgaatctgcttgtgtctctgtccatggtg 604


Query: 935 ccaatcgtttaggtgccaactctctattggatatcgttgtctttggtagagctgtagcca 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ccaatcgtttaggtgccaactctctattggatatcgttgtctttggtagagctgtagcca 544


Query: 995 atgaaatcgaaaataccctcgccaaggataccccacacaaaccattaccaccaaatgctg 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 atgaaatcgaaaataccctcgccaaggataccccacacaaaccattaccaccaaatgctg 484


Query: 1055 gtgaagaatcaattgcaaatattgatgccattcgtttctctaatggtactcgttcaaccg 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gtgaagaatcaattgcaaatattgatgccattcgtttctctaatggtactcgttcaaccg 424


Query: 1115 ctgaaattcgtttagagatgcaaaagattatgcaaagaaatgctgccgtctttagagatg 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ctgaaattcgtttagagatgcaaaagattatgcaaagaaatgctgccgtctttagagatg 364


Query: 1175 gtcaagtcttaaaggaaggtgttgaattaattgataaatgtgctcgttcactcataaatg 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gtcaagtcttaaaggaaggtgttgaattaattgataaatgtgctcgttcactcataaatg 304


Query: 1235 atctcaaaaccaccgatcgtaccatgatttggaataccgatttaatcgaatcattagaac 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atctcaaaaccaccgatcgtaccatgatttggaataccgatttaatcgaatcattagaac 244


Query: 1295 tccaaaatcttatgactcaagccgtcctcactatgcactctgctgaagcacgtaaagaaa 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tccaaaatcttatgactcaagccgtcctcactatgcactctgctgaagcacgtaaagaaa 184


Query: 1355 gtcgtggtgctcatgctcgtgaagattacaaagaaagagatgatgccaactggatgaaac 1414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gtcgtggtgctcatgctcgtgaagattacaaagaaagagatgatgccaactggatgaaac 124


Query: 1415 ataccttatcctatttagatgttaatactggtaaagttacccttaactatcgtccagtag 1474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ataccttatcctatttagatgttaatactggtaaagttacccttaactatcgtccagtag 64


Query: 1475 tttctgaaactttagatcaatcgaaaggaaactattaaaccattcaag 1522
|||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 63 tttctgaaactttagatcaatcnaaangaaactattaaaccattcaag 16

Score = 28.2 bits (14), Expect(2) = 0.0
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 1523 agagtttataaaga 1536
||||||||||||||
Sbjct: 14 agagtttataaaga 1

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,413,268,114
Number of extensions: 76566938
Number of successful extensions: 5707464
Number of sequences better than 10.0: 2736
Length of query: 1537
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1513
Effective length of database: 97,308,875,965
Effective search space: 147228329335045
Effective search space used: 147228329335045
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.28
Homology vs Protein
Query= Contig-U10930-1 (Contig-U10930-1Q) /CSM_Contig/Contig-U10930-1Q.Seq.d
(1537 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

BT044695_1(BT044695|pid:none) Salmo salar clone ssal-rgf-501-013... 329 1e-88
CP001331_489(CP001331|pid:none) Micromonas sp. RCC299 chromosome... 320 7e-86
AK094879_1(AK094879|pid:none) Homo sapiens cDNA FLJ37560 fis, cl... 315 3e-84
AY391458_1(AY391458|pid:none) Danio rerio succinate dehydrogenas... 315 4e-84
(Q7ZVF3) RecName: Full=Succinate dehydrogenase [ubiquinone] flav... 315 4e-84
AB208991_1(AB208991|pid:none) Homo sapiens mRNA for succinate de... 313 8e-84
(Q8HXW3) RecName: Full=Succinate dehydrogenase [ubiquinone] flav... 313 8e-84
AF095939_1(AF095939|pid:none) Gallus gallus succinate dehydrogen... 313 1e-83
BT030722_1(BT030722|pid:none) Bos taurus succinate dehydrogenase... 312 2e-83
BC105357_1(BC105357|pid:none) Bos taurus succinate dehydrogenase... 312 2e-83
DQ845177_1(DQ845177|pid:none) Sus scrofa mitochondrial succinate... 312 2e-83
AF171030_1(AF171030|pid:none) Homo sapiens succinate dehydrogena... 308 3e-82
AK145923_1(AK145923|pid:none) Mus musculus cDNA, RIKEN full-leng... 308 4e-82
BC011301_1(BC011301|pid:none) Mus musculus succinate dehydrogena... 307 6e-82
(Q8K2B3) RecName: Full=Succinate dehydrogenase [ubiquinone] flav... 307 6e-82
(Q9ZPX5) RecName: Full=Succinate dehydrogenase [ubiquinone] flav... 307 8e-82
BT043557_1(BT043557|pid:none) Salmo salar clone HM4_2244 succina... 305 2e-81
FN392322_764(FN392322|pid:none) Pichia pastoris GS115 chromosome... 305 3e-81
A42792(A42792)succinate dehydrogenase (ubiquinone) (EC 1.3.5.1) ... 305 4e-81
(Q801S2) RecName: Full=Succinate dehydrogenase [ubiquinone] flav... 304 5e-81
DQ228958_1(DQ228958|pid:none) Toxoplasma gondii mitochondrial su... 303 8e-81
(Q00711) RecName: Full=Succinate dehydrogenase [ubiquinone] flav... 303 1e-80
(P31039) RecName: Full=Succinate dehydrogenase [ubiquinone] flav... 303 1e-80
M60879_1(M60879|pid:none) B.taurus succinate dehydrogenase flavo... 303 1e-80
CR382137_303(CR382137|pid:none) Debaryomyces hansenii strain CBS... 300 9e-80
(O82663) RecName: Full=Succinate dehydrogenase [ubiquinone] flav... 300 1e-79
AJ555233_1(AJ555233|pid:none) Kluyveromyces lactis sdh1 gene for... 299 2e-79
CR382130_467(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 295 2e-78
FM992691_581(FM992691|pid:none) Candida dubliniensis CD36 chromo... 295 2e-78
D89263_1(D89263|pid:none) Schizosaccharomyces pombe mRNA, partia... 295 2e-78
(Q9UTJ7) RecName: Full=Probable succinate dehydrogenase [ubiquin... 295 2e-78
D30650_1(D30650|pid:none) Ascaris suum mRNA for flavoprotein sub... 294 7e-78
FJ217746_1(FJ217746|pid:none) Botryotinia fuckeliana isolate I1 ... 293 9e-78
EU970939_1(EU970939|pid:none) Zea mays clone 354307 succinate de... 292 2e-77
BT056014_1(BT056014|pid:none) Zea mays full-length cDNA clone ZM... 291 6e-77
CP000600_8(CP000600|pid:none) Ostreococcus lucimarinus CCE9901 c... 290 7e-77
CR954214_12(CR954214|pid:none) Ostreococcus tauri strain OTTH059... 290 7e-77
(P47052) RecName: Full=Succinate dehydrogenase [ubiquinone] flav... 290 1e-76
AB071995_1(AB071995|pid:none) Ascaris suum SDHA2 mRNA for flavop... 288 5e-76
DQ674551_1(DQ674551|pid:none) Coccidioides posadasii succinate d... 287 8e-76
CP001349_6931(CP001349|pid:none) Methylobacterium nodulans ORS 2... 287 8e-76
CP001001_443(CP001001|pid:none) Methylobacterium radiotolerans J... 283 9e-75
AM743169_1701(AM743169|pid:none) Stenotrophomonas maltophilia K2... 283 1e-74
CP000847_184(CP000847|pid:none) Rickettsia akari str. Hartford, ... 282 2e-74
DQ402986_1(DQ402986|pid:none) Felis catus succinate dehydrogenas... 282 3e-74
FN357471_10(FN357471|pid:none) Schistosoma mansoni genome sequen... 282 3e-74
DQ402988_1(DQ402988|pid:none) Ceratotherium simum succinate dehy... 280 1e-73
DQ402989_1(DQ402989|pid:none) Diceros bicornis succinate dehydro... 280 1e-73
DQ402983_1(DQ402983|pid:none) Aotus trivirgatus succinate dehydr... 280 1e-73
AP009384_3745(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 280 1e-73
AM260525_2002(AM260525|pid:none) Bartonella tribocorum CIP 10547... 280 1e-73
CP000849_272(CP000849|pid:none) Rickettsia bellii OSU 85-389, co... 279 2e-73
DQ402982_1(DQ402982|pid:none) Homo sapiens succinate dehydrogena... 278 3e-73
DQ402991_1(DQ402991|pid:none) Balaenoptera physalus succinate de... 278 3e-73
AM920435_603(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 278 4e-73
CR925677_708(CR925677|pid:none) Ehrlichia ruminantium str. Garde... 278 4e-73
DQ402972_1(DQ402972|pid:none) Loxodonta africana succinate dehyd... 277 6e-73
DQ402978_1(DQ402978|pid:none) Cavia porcellus succinate dehydrog... 277 8e-73
S78630_1(S78630|pid:none) succinate-ubiquinone oxidoreductase=fl... 277 8e-73
CU234118_224(CU234118|pid:none) Bradyrhizobium sp. ORS278,comple... 277 8e-73
DQ402990_1(DQ402990|pid:none) Bos taurus succinate dehydrogenase... 276 1e-72
CP000544_44(CP000544|pid:none) Halorhodospira halophila SL1, com... 276 1e-72
(Q92J97) RecName: Full=Succinate dehydrogenase flavoprotein subu... 276 1e-72
DQ402984_1(DQ402984|pid:none) Tupaia glis succinate dehydrogenas... 276 2e-72
DQ402981_1(DQ402981|pid:none) Tadarida brasiliensis succinate de... 276 2e-72
AE008923_2042(AE008923|pid:none) Xanthomonas axonopodis pv. citr... 276 2e-72
CR548612_181(CR548612|pid:none) Paramecium tetraurelia macronucl... 275 2e-72
CP001096_214(CP001096|pid:none) Rhodopseudomonas palustris TIE-1... 275 2e-72
CP000967_2223(CP000967|pid:none) Xanthomonas oryzae pv. oryzae P... 275 2e-72
BX572593_218(BX572593|pid:none) Rhodopseudomonas palustris CGA00... 275 2e-72
(Q4UJM1) RecName: Full=Succinate dehydrogenase flavoprotein subu... 275 3e-72
AE013598_2270(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 275 3e-72
AK302524_1(AK302524|pid:none) Homo sapiens cDNA FLJ61478 complet... 274 5e-72
CP001298_3736(CP001298|pid:none) Methylobacterium chloromethanic... 274 5e-72
DQ402987_1(DQ402987|pid:none) Equus caballus succinate dehydroge... 274 7e-72
(P31038) RecName: Full=Succinate dehydrogenase flavoprotein subu... 274 7e-72
CP001391_254(CP001391|pid:none) Wolbachia sp. wRi, complete geno... 273 9e-72
DQ402976_1(DQ402976|pid:none) Rattus norvegicus succinate dehydr... 273 9e-72
AP007255_3952(AP007255|pid:none) Magnetospirillum magneticum AMB... 273 9e-72
DQ402973_1(DQ402973|pid:none) Dasypus novemcinctus succinate deh... 273 1e-71
AP008981_1955(AP008981|pid:none) Orientia tsutsugamushi str. Ike... 273 1e-71
AY181036_3(AY181036|pid:none) Methylobacterium extorquens succin... 273 2e-71
CP000524_89(CP000524|pid:none) Bartonella bacilliformis KC583, c... 273 2e-71
BX897700_1221(BX897700|pid:none) Bartonella quintana str. Toulou... 271 5e-71
CP000613_3857(CP000613|pid:none) Rhodospirillum centenum SW, com... 271 5e-71
AF095938_1(AF095938|pid:none) Mus musculus succinate dehydrogena... 271 5e-71
CP000107_669(CP000107|pid:none) Ehrlichia canis str. Jake, compl... 271 6e-71
(Q68XN9) RecName: Full=Succinate dehydrogenase flavoprotein subu... 271 6e-71
CP000356_3010(CP000356|pid:none) Sphingopyxis alaskensis RB2256,... 270 1e-70
CP000463_510(CP000463|pid:none) Rhodopseudomonas palustris BisA5... 270 1e-70
D30651_1(D30651|pid:none) Caenorhabditis elegans mRNA for flavop... 270 1e-70
CP000157_1431(CP000157|pid:none) Erythrobacter litoralis HTCC259... 269 2e-70
CP000235_146(CP000235|pid:none) Anaplasma phagocytophilum HZ, co... 269 2e-70
AE017282_1465(AE017282|pid:none) Methylococcus capsulatus str. B... 269 2e-70
AY598348_1(AY598348|pid:none) Anaplasma phagocytophilum succinat... 269 2e-70
CP000319_3444(CP000319|pid:none) Nitrobacter hamburgensis X14, c... 268 5e-70
CP000236_301(CP000236|pid:none) Ehrlichia chaffeensis str. Arkan... 267 7e-70
CP000250_324(CP000250|pid:none) Rhodopseudomonas palustris HaA2,... 267 9e-70
CP000158_3184(CP000158|pid:none) Hyphomonas neptunium ATCC 15444... 265 3e-69
AE017321_444(AE017321|pid:none) Wolbachia endosymbiont strain TR... 265 3e-69
CP000390_3211(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 265 4e-69
CP000697_1854(CP000697|pid:none) Acidiphilium cryptum JF-5, comp... 265 4e-69
CP000115_2785(CP000115|pid:none) Nitrobacter winogradskyi Nb-255... 264 6e-69
CP000927_4820(CP000927|pid:none) Caulobacter sp. K31, complete g... 263 1e-68
CP000758_942(CP000758|pid:none) Ochrobactrum anthropi ATCC 49188... 263 1e-68
AM889285_1404(AM889285|pid:none) Gluconacetobacter diazotrophicu... 263 1e-68
CP000830_2849(CP000830|pid:none) Dinoroseobacter shibae DFL 12, ... 261 5e-68
AD3272(AD3272) succinate dehydrogenase (EC 1.3.99.1) [imported] ... 261 6e-68
AE017223_1767(AE017223|pid:none) Brucella abortus biovar 1 str. ... 261 6e-68
CP000708_1677(CP000708|pid:none) Brucella ovis ATCC 25840 chromo... 261 6e-68
CP000248_1737(CP000248|pid:none) Novosphingobium aromaticivorans... 260 8e-68
AB170248_1(AB170248|pid:none) Macaca fascicularis brain cDNA clo... 258 3e-67
CP000237_362(CP000237|pid:none) Neorickettsia sennetsu strain Mi... 258 5e-67
AE014291_1843(AE014291|pid:none) Brucella suis 1330 chromosome I... 258 5e-67
Y09064_1(Y09064|pid:none) D.melanogaster mRNA for succinate dehy... 257 7e-67
CT005263_162(CT005263|pid:none) Leishmania major strain Friedlin... 256 1e-66
AM494961_169(AM494961|pid:none) Leishmania braziliensis chromoso... 256 1e-66
(Q59661) RecName: Full=Succinate dehydrogenase flavoprotein subu... 256 2e-66
D86573_1(D86573|pid:none) Plasmodium falciparum gene for flavopr... 256 2e-66
AE014185_331(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 256 2e-66
AB031741_1(AB031741|pid:none) Trypanosoma cruzi mRNA for succina... 255 3e-66
CP000376_494(CP000376|pid:none) Silicibacter sp. TM1040 mega pla... 254 6e-66
BA000012_3280(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 254 8e-66
AE014296_2184(AE014296|pid:none) Drosophila melanogaster chromos... 253 1e-65
CP000031_350(CP000031|pid:none) Ruegeria pomeroyi DSS-3, complet... 253 1e-65
AM910988_195(AM910988|pid:none) Plasmodium knowlesi strain H chr... 253 2e-65
CP001191_3650(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 252 2e-65
CP001074_4120(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 252 2e-65
CP001150_2368(CP001150|pid:none) Rhodobacter sphaeroides KD131 c... 250 9e-65
AF043693_6(AF043693|pid:none) Caenorhabditis elegans cosmid C34B... 250 1e-64
CP000133_3838(CP000133|pid:none) Rhizobium etli CFN 42, complete... 249 2e-64
CP000143_2591(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 c... 249 2e-64
CP000633_3031(CP000633|pid:none) Agrobacterium vitis S4 chromoso... 249 2e-64
CP000661_87(CP000661|pid:none) Rhodobacter sphaeroides ATCC 1702... 249 2e-64
AY616152_1(AY616152|pid:none) Nyctotherus ovalis mitochondrial c... 249 2e-64
AY847293_1(AY847293|pid:none) Mrakia psychrophilia succinate deh... 246 1e-63
AY616153_1(AY616153|pid:none) Nyctotherus ovalis mitochondrial c... 245 3e-63
AL591688_3080(AL591688|pid:none) Sinorhizobium meliloti 1021 com... 245 3e-63
DQ402970_1(DQ402970|pid:none) Didelphis virginiana succinate deh... 244 8e-63
CP000738_2926(CP000738|pid:none) Sinorhizobium medicae WSM419, c... 243 1e-62
DQ402971_1(DQ402971|pid:none) Sminthopsis douglasi succinate deh... 239 3e-61
CP000362_1518(CP000362|pid:none) Roseobacter denitrificans OCh 1... 238 6e-61
AP009386_670(AP009386|pid:none) Burkholderia multivorans ATCC 17... 236 2e-60
AE004969_844(AE004969|pid:none) Neisseria gonorrhoeae FA 1090, c... 232 3e-59
AM421808_878(AM421808|pid:none) Neisseria meningitidis serogroup... 231 7e-59
AL157959_1022(AL157959|pid:none) Neisseria meningitidis serogrou... 230 9e-59
AM747721_973(AM747721|pid:none) Burkholderia cenocepacia J2315 c... 230 9e-59
CP000381_848(CP000381|pid:none) Neisseria meningitidis 053442, c... 230 9e-59
CP001010_905(CP001010|pid:none) Polynucleobacter necessarius sub... 229 2e-58
CP000379_1432(CP000379|pid:none) Burkholderia cenocepacia AU 105... 229 3e-58
CP000352_2475(CP000352|pid:none) Ralstonia metallidurans CH34, c... 228 3e-58
CP000152_2144(CP000152|pid:none) Burkholderia sp. 383 chromosome... 228 3e-58
CP000615_1076(CP000615|pid:none) Burkholderia vietnamiensis G4 c... 228 6e-58
AF479751_4(AF479751|pid:none) Ralstonia eutropha BraC protein, c... 227 1e-57
CP000090_2303(CP000090|pid:none) Ralstonia eutropha JMP134 chrom... 225 4e-57
X77919_1(X77919|pid:none) C.burnetti Nine Mile RSA493 phase I ge... 224 5e-57
AL954747_1049(AL954747|pid:none) Nitrosomonas europaea ATCC 1971... 224 5e-57
CP001504_742(CP001504|pid:none) Burkholderia glumae BGR1 chromos... 224 7e-57
CP001020_1310(CP001020|pid:none) Coxiella burnetii CbuK_Q154, co... 223 2e-56
CP000450_2401(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 223 2e-56
CP001019_562(CP001019|pid:none) Coxiella burnetii CbuG_Q212, com... 221 6e-56
AL646052_1993(AL646052|pid:none) Ralstonia solanacearum GMI1000 ... 220 9e-56
CP000085_659(CP000085|pid:none) Burkholderia thailandensis E264 ... 220 9e-56
CP000269_1508(CP000269|pid:none) Janthinobacterium sp. Marseille... 220 9e-56
CP000675_628(CP000675|pid:none) Legionella pneumophila str. Corb... 220 1e-55
CR555306_3825(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 219 2e-55
CP000103_855(CP000103|pid:none) Nitrosospira multiformis ATCC 25... 219 2e-55
CP001053_2772(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 219 2e-55
BX571966_1749(BX571966|pid:none) Burkholderia pseudomallei strai... 218 4e-55
CP000271_134(CP000271|pid:none) Burkholderia xenovorans LB400 ch... 218 5e-55
AJ749949_74(AJ749949|pid:none) Francisella tularensis subsp. tul... 218 6e-55
CP000915_117(CP000915|pid:none) Francisella tularensis subsp. me... 218 6e-55
CP001281_2383(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 217 8e-55
CP000934_1466(CP000934|pid:none) Cellvibrio japonicus Ueda107, c... 216 2e-54
CP000937_971(CP000937|pid:none) Francisella philomiragia subsp. ... 216 2e-54
CP000155_4524(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 215 3e-54
CP000116_1184(CP000116|pid:none) Thiobacillus denitrificans ATCC... 215 4e-54
CP000089_2834(CP000089|pid:none) Dechloromonas aromatica RCB, co... 213 1e-53
AP008226_1454(AP008226|pid:none) Thermus thermophilus HB8 genomi... 212 3e-53
AE017221_1084(AE017221|pid:none) Thermus thermophilus HB27, comp... 212 3e-53
CP000555_2162(CP000555|pid:none) Methylibium petroleiphilum PM1,... 212 3e-53
CP000285_1205(CP000285|pid:none) Chromohalobacter salexigens DSM... 211 6e-53
CP000075_2006(CP000075|pid:none) Pseudomonas syringae pv. syring... 210 1e-52
CP000316_3540(CP000316|pid:none) Polaromonas sp. JS666, complete... 209 2e-52
CP000304_1839(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 209 2e-52
CP000949_3491(CP000949|pid:none) Pseudomonas putida W619, comple... 209 3e-52
AE015451_4138(AE015451|pid:none) Pseudomonas putida KT2440 compl... 209 3e-52
AM181176_1777(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 208 4e-52
AE004091_1585(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 208 4e-52
CP000094_1611(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 208 4e-52
AB015757_3(AB015757|pid:none) Rhodoferax fermentans genes for fu... 208 5e-52
CP000926_3736(CP000926|pid:none) Pseudomonas putida GB-1, comple... 207 6e-52
AE016853_2158(AE016853|pid:none) Pseudomonas syringae pv. tomato... 207 8e-52
CR940352_203(CR940352|pid:none) Theileria annulata strain Ankara... 207 8e-52
AM902716_1830(AM902716|pid:none) Bordetella petrii strain DSM 12... 207 1e-51
CP000680_2486(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 206 1e-51
CP000076_1690(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 206 2e-51
AM286690_1498(AM286690|pid:none) Alcanivorax borkumensis SK2, co... 205 3e-51
CP001600_2769(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 204 5e-51
CP000964_3767(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 204 9e-51
AP006725_1505(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 204 9e-51
CP000512_2162(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 204 9e-51
J01619_4(J01619|pid:none) Eschericia coli gltA gene, sdhCDAB ope... 203 1e-50
AE016825_1067(AE016825|pid:none) Chromobacterium violaceum ATCC ... 203 1e-50
AE005674_574(AE005674|pid:none) Shigella flexneri 2a str. 301, c... 203 1e-50
AB0591(AB0591) succinate dehydrogenase flavoprotein chain [impor... 203 1e-50
CP000034_610(CP000034|pid:none) Shigella dysenteriae Sd197, comp... 203 1e-50
AE005174_747(AE005174|pid:none) Escherichia coli O157:H7 EDL933,... 203 1e-50
CP001063_557(CP001063|pid:none) Shigella boydii CDC 3083-94, com... 203 1e-50
AE014075_774(AE014075|pid:none) Escherichia coli CFT073, complet... 203 1e-50
CP000800_714(CP000800|pid:none) Escherichia coli E24377A, comple... 203 1e-50
CU928158_2299(CU928158|pid:none) Escherichia fergusonii ATCC 354... 203 1e-50
FM180568_603(FM180568|pid:none) Escherichia coli 0127:H6 E2348/6... 203 1e-50
FP236842_2440(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/9... 203 2e-50
BX571863_218(BX571863|pid:none) Photorhabdus luminescens subsp. ... 203 2e-50
CP001339_1446(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, ... 203 2e-50
AP008232_874(AP008232|pid:none) Sodalis glossinidius str. 'morsi... 202 2e-50
CP000789_1269(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 202 2e-50
BA000031_845(BA000031|pid:none) Vibrio parahaemolyticus RIMD 221... 202 2e-50
FM178379_844(FM178379|pid:none) Aliivibrio salmonicida LFI1238 c... 202 3e-50
CR954246_1608(CR954246|pid:none) Pseudoalteromonas haloplanktis ... 201 6e-50
BA000030_3404(BA000030|pid:none) Streptomyces avermitilis MA-468... 201 6e-50
CP001277_1696(CP001277|pid:none) Candidatus Hamiltonella defensa... 200 1e-49
CP000542_4262(CP000542|pid:none) Verminephrobacter eiseniae EF01... 200 1e-49
CP000510_2124(CP000510|pid:none) Psychromonas ingrahamii 37, com... 199 2e-49
CP000127_2370(CP000127|pid:none) Nitrosococcus oceani ATCC 19707... 199 3e-49
CP000826_1259(CP000826|pid:none) Serratia proteamaculans 568, co... 199 3e-49
BA000021_421(BA000021|pid:none) Wigglesworthia glossinidia endos... 199 3e-49
CP000388_1785(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 199 3e-49
AM286415_2803(AM286415|pid:none) Yersinia enterocolitica subsp. ... 198 4e-49
CP000539_2680(CP000539|pid:none) Acidovorax sp. JS42, complete g... 196 1e-48
CP000462_1874(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 196 2e-48
CR378666_104(CR378666|pid:none) Photobacterium profundum SS9; se... 196 2e-48
AE017340_1499(AE017340|pid:none) Idiomarina loihiensis L2TR, com... 195 3e-48
CP000446_1627(CP000446|pid:none) Shewanella sp. MR-4, complete g... 195 3e-48
AY616157_1(AY616157|pid:none) Euplotes sp. BB-2004 mitochondrial... 195 4e-48
CP000961_1818(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 195 4e-48
CP000644_2191(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 195 4e-48
CU468230_722(CU468230|pid:none) Acinetobacter baumannii str. SDF... 194 7e-48
CP000521_2983(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 194 7e-48
CP000891_2616(CP000891|pid:none) Shewanella baltica OS195, compl... 194 9e-48
CP000753_2474(CP000753|pid:none) Shewanella baltica OS185, compl... 194 9e-48
CP000083_2160(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 194 9e-48
AY194228_3(AY194228|pid:none) Enterobacter cloacae succinate deh... 193 1e-47
CP000884_2416(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 192 4e-47
CP000931_2472(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 191 8e-47
CP001275_323(CP001275|pid:none) Thermomicrobium roseum DSM 5159,... 191 8e-47
CP001147_758(CP001147|pid:none) Thermodesulfovibrio yellowstonii... 191 8e-47
CP000431_6187(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 190 1e-46
CP001108_2190(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 189 2e-46
CP001100_455(CP001100|pid:none) Chloroherpeton thalassium ATCC 3... 189 2e-46
AE000513_935(AE000513|pid:none) Deinococcus radiodurans R1 chrom... 188 4e-46
CP000016_317(CP000016|pid:none) Candidatus Blochmannia pennsylva... 188 5e-46
AE016822_335(AE016822|pid:none) Leifsonia xyli subsp. xyli str. ... 188 5e-46
AM711867_987(AM711867|pid:none) Clavibacter michiganensis subsp.... 187 7e-46
CP000240_2070(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-1... 187 9e-46
AB169760_1(AB169760|pid:none) Macaca fascicularis brain cDNA, cl... 187 1e-45
AP008957_2043(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 187 1e-45
CP001114_1368(CP001114|pid:none) Deinococcus deserti VCD115, com... 186 2e-45
AY616151_1(AY616151|pid:none) Nyctotherus ovalis mitochondrial c... 185 3e-45
AP011115_6305(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 185 3e-45
BX248583_310(BX248583|pid:none) Blochmannia floridanus complete ... 184 7e-45
AP006618_954(AP006618|pid:none) Nocardia farcinica IFM 10152 DNA... 182 2e-44
AE000516_3539(AE000516|pid:none) Mycobacterium tuberculosis CDC1... 182 2e-44
CP000159_472(CP000159|pid:none) Salinibacter ruber DSM 13855, co... 182 3e-44
CP000828_2695(CP000828|pid:none) Acaryochloris marina MBIC11017,... 182 3e-44
CP000656_4818(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 181 5e-44
CP000480_1623(CP000480|pid:none) Mycobacterium smegmatis str. MC... 181 8e-44
BC062438_1(BC062438|pid:none) Homo sapiens succinate dehydrogena... 180 1e-43
AE016958_3443(AE016958|pid:none) Mycobacterium avium subsp. para... 180 1e-43
AL583919_130(AL583919|pid:none) Mycobacterium leprae strain TN c... 180 1e-43
CP000384_1218(CP000384|pid:none) Mycobacterium sp. MCS, complete... 180 1e-43
CP000249_668(CP000249|pid:none) Frankia sp. CcI3, complete genome. 178 5e-43
CQ782698_1(CQ782698|pid:none) Sequence 2838 from Patent EP1396543. 177 9e-43
S73049(S73049) hypothetical protein L308_F3_120 - Mycobacterium ... 177 1e-42
AP009552_5624(AP009552|pid:none) Microcystis aeruginosa NIES-843... 176 2e-42
AK004362_1(AK004362|pid:none) Mus musculus 18-day embryo whole b... 176 3e-42
AP009152_1791(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, ... 175 3e-42
AE000657_428(AE000657|pid:none) Aquifex aeolicus VF5, complete g... 175 3e-42
AK300421_1(AK300421|pid:none) Homo sapiens cDNA FLJ56858 complet... 174 6e-42
CP001341_1190(CP001341|pid:none) Arthrobacter chlorophenolicus A... 174 8e-42
CP000854_1188(CP000854|pid:none) Mycobacterium marinum M, comple... 174 1e-41
CP000454_1122(CP000454|pid:none) Arthrobacter sp. FB24, complete... 174 1e-41
CT573213_1151(CT573213|pid:none) Frankia alni str. ACN14A chromo... 174 1e-41
AJ005961_4(AJ005961|pid:none) Acidianus ambivalens sdhABCD opero... 172 2e-41
CP000682_675(CP000682|pid:none) Metallosphaera sedula DSM 5348, ... 172 3e-41
CP000325_1135(CP000325|pid:none) Mycobacterium ulcerans Agy99, c... 172 4e-41
CP000393_2153(CP000393|pid:none) Trichodesmium erythraeum IMS101... 171 7e-41
CP001101_2419(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 171 7e-41
CP000493_145(CP000493|pid:none) Hyperthermus butylicus DSM 5456,... 170 1e-40
CP000951_2527(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 170 1e-40
CP000077_913(CP000077|pid:none) Sulfolobus acidocaldarius DSM 63... 169 2e-40
CP001618_2931(CP001618|pid:none) Beutenbergia cavernae DSM 12333... 169 2e-40
CP001100_164(CP001100|pid:none) Chloroherpeton thalassium ATCC 3... 169 2e-40
CP001037_2499(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 169 2e-40
T45162(T45162) succinate dehydrogenase (EC 1.3.99.1) chain A [im... 169 3e-40
BA000045_2988(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 168 4e-40
CP001399_187(CP001399|pid:none) Sulfolobus islandicus L.S.2.15, ... 168 6e-40
CP001400_154(CP001400|pid:none) Sulfolobus islandicus M.14.25, c... 167 7e-40
CP001404_2464(CP001404|pid:none) Sulfolobus islandicus Y.N.15.51... 167 7e-40
CP000478_2083(CP000478|pid:none) Syntrophobacter fumaroxidans MP... 167 9e-40
CP000117_934(CP000117|pid:none) Anabaena variabilis ATCC 29413, ... 166 3e-39
AP009179_1200(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic ... 164 6e-39
CP001230_1357(CP001230|pid:none) Persephonella marina EX-H1, com... 164 8e-39
BA000022_941(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA, ... 164 8e-39
AC2177(AC2177) succinate dehydrogenase flavoprotein [imported] -... 164 1e-38
AB055061_3(AB055061|pid:none) Sulfolobus tokodaii orf1, nagD, sd... 162 3e-38
CP001080_241(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1... 162 4e-38
CP000108_126(CP000108|pid:none) Chlorobium chlorochromatii CaD3,... 162 4e-38
CP001229_172(CP001229|pid:none) Sulfurihydrogenibium azorense Az... 160 9e-38
AE009441_481(AE009441|pid:none) Pyrobaculum aerophilum str. IM2,... 160 1e-37
A69335(A69335) succinate dehydrogenase (EC 1.3.99.1) flavoprotei... 159 3e-37
CP000561_2102(CP000561|pid:none) Pyrobaculum calidifontis JCM 11... 159 3e-37
CP000607_1619(CP000607|pid:none) Chlorobium phaeovibrioides DSM ... 158 4e-37
CP001130_630(CP001130|pid:none) Hydrogenobaculum sp. Y04AAS1, co... 158 4e-37
AJ621269_1(AJ621269|pid:none) Thermoproteus tenax sdhA gene for ... 158 6e-37
AE017261_995(AE017261|pid:none) Picrophilus torridus DSM 9790, c... 158 6e-37
CP000644_1010(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 157 8e-37
CP000148_303(CP000148|pid:none) Geobacter metallireducens GS-15,... 157 1e-36
CR936257_2122(CR936257|pid:none) Natronomonas pharaonis DSM 2160... 157 1e-36
CP000504_665(CP000504|pid:none) Pyrobaculum islandicum DSM 4184,... 157 1e-36
CP000462_3117(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 156 2e-36
CP000660_2284(CP000660|pid:none) Pyrobaculum arsenaticum DSM 135... 156 2e-36
CP000510_3094(CP000510|pid:none) Psychromonas ingrahamii 37, com... 156 2e-36
CP001110_2516(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 155 3e-36
CP000096_1945(CP000096|pid:none) Pelodictyon luteolum DSM 273, c... 155 3e-36
AE006470_2014(AE006470|pid:none) Chlorobium tepidum TLS, complet... 154 6e-36
CP001279_1080(CP001279|pid:none) Nautilia profundicola AmH, comp... 153 1e-35
CP000057_881(CP000057|pid:none) Haemophilus influenzae 86-028NP,... 153 1e-35
(P44894) RecName: Full=Fumarate reductase flavoprotein subunit; ... 153 1e-35
CP000671_1383(CP000671|pid:none) Haemophilus influenzae PittEE, ... 153 2e-35
AM180088_2060(AM180088|pid:none) Haloquadratum walsbyi DSM 16790... 152 3e-35
AB437311_1(AB437311|pid:none) Hydrogenobacter thermophilus frdA ... 151 7e-35
CP001108_239(CP001108|pid:none) Prosthecochloris aestuarii DSM 2... 150 1e-34
F72691(F72691)probable fumarate reductase flavoprotein subunit A... 148 5e-34
AP006725_385(AP006725|pid:none) Klebsiella pneumoniae NTUH-K2044... 148 5e-34
CP000647_4483(CP000647|pid:none) Klebsiella pneumoniae subsp. pn... 147 1e-33
BX950851_3942(BX950851|pid:none) Erwinia carotovora subsp. atros... 147 1e-33
CP000266_4004(CP000266|pid:none) Shigella flexneri 5 str. 8401, ... 147 1e-33
CP000504_243(CP000504|pid:none) Pyrobaculum islandicum DSM 4184,... 147 1e-33
CP000038_4031(CP000038|pid:none) Shigella sonnei Ss046, complete... 147 1e-33
AE014075_5133(AE014075|pid:none) Escherichia coli CFT073, comple... 147 1e-33
DQ680266_1(DQ680266|pid:none) Mannheimia haemolytica strain A1 f... 146 2e-33
PDBN(1FUM)A MOL_ID: 1;MOL_ID: 1; MOLECULE: FUMARATE REDUCTASE FL... 146 2e-33
CP001113_4373(CP001113|pid:none) Salmonella enterica subsp. ente... 146 2e-33
CP000857_4350(CP000857|pid:none) Salmonella enterica subsp. ente... 146 2e-33
CP000822_3576(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 146 2e-33
(P00363) RecName: Full=Fumarate reductase flavoprotein subunit; ... 146 2e-33
CP000802_4155(CP000802|pid:none) Escherichia coli HS, complete g... 146 2e-33
AP009256_593(AP009256|pid:none) Bifidobacterium adolescentis ATC... 145 3e-33
CP000605_679(CP000605|pid:none) Bifidobacterium longum DJO10A, c... 145 3e-33
AB1047(AB1047) succinate dehydrogenase (EC 1.3.99.1) - Salmonell... 145 3e-33
AE017220_4222(AE017220|pid:none) Salmonella enterica subsp. ente... 145 3e-33
CP000746_1782(CP000746|pid:none) Actinobacillus succinogenes 130... 145 4e-33
(P20922) RecName: Full=Fumarate reductase flavoprotein subunit; ... 145 4e-33
BX571872_280(BX571872|pid:none) Photorhabdus luminescens subsp. ... 145 4e-33
CP000852_1832(CP000852|pid:none) Caldivirga maquilingensis IC-16... 145 4e-33
CP000826_417(CP000826|pid:none) Serratia proteamaculans 568, com... 145 4e-33
AE005174_5121(AE005174|pid:none) Escherichia coli O157:H7 EDL933... 145 5e-33
CP000947_765(CP000947|pid:none) Haemophilus somnus 2336, complet... 145 5e-33
CP000436_1285(CP000436|pid:none) Haemophilus somnus 129PT, compl... 145 5e-33
CP000606_333(CP000606|pid:none) Shewanella loihica PV-4, complet... 144 9e-33
CP001213_964(CP001213|pid:none) Bifidobacterium animalis subsp. ... 144 1e-32
CP001144_4275(CP001144|pid:none) Salmonella enterica subsp. ente... 144 1e-32
CP000141_63(CP000141|pid:none) Carboxydothermus hydrogenoformans... 143 2e-32
FM178379_2787(FM178379|pid:none) Aliivibrio salmonicida LFI1238 ... 142 2e-32
FM954972_222(FM954972|pid:none) Vibrio splendidus LGP32 chromoso... 141 6e-32
AY596297_971(AY596297|pid:none) Haloarcula marismortui ATCC 4304... 141 7e-32
CP000503_498(CP000503|pid:none) Shewanella sp. W3-18-1, complete... 141 7e-32
AE017143_22(AE017143|pid:none) Haemophilus ducreyi strain 35000H... 140 9e-32
AP009389_1017(AP009389|pid:none) Pelotomaculum thermopropionicum... 140 1e-31
CP000544_1422(CP000544|pid:none) Halorhodospira halophila SL1, c... 140 1e-31
AE004437_1007(AE004437|pid:none) Halobacterium sp. NRC-1, comple... 140 2e-31
CP000851_393(CP000851|pid:none) Shewanella pealeana ATCC 700345,... 140 2e-31
CP000789_118(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 chr... 139 3e-31
EU192129_1(EU192129|pid:none) Issatchenkia orientalis succinate ... 139 4e-31
CP000891_4054(CP000891|pid:none) Shewanella baltica OS195, compl... 138 6e-31
AE016825_3369(AE016825|pid:none) Chromobacterium violaceum ATCC ... 138 6e-31
CP001252_3815(CP001252|pid:none) Shewanella baltica OS223, compl... 137 8e-31
CP000753_3908(CP000753|pid:none) Shewanella baltica OS185, compl... 137 8e-31
CP001139_2358(CP001139|pid:none) Vibrio fischeri MJ11 chromosome... 137 8e-31
CP000866_254(CP000866|pid:none) Nitrosopumilus maritimus SCM1, c... 137 8e-31
CP000753_603(CP000753|pid:none) Shewanella baltica OS185, comple... 137 1e-30
CP000561_1368(CP000561|pid:none) Pyrobaculum calidifontis JCM 11... 137 1e-30
AE003852_2619(AE003852|pid:none) Vibrio cholerae O1 biovar eltor... 137 1e-30
CP000563_3687(CP000563|pid:none) Shewanella baltica OS155, compl... 137 1e-30
(P64174) RecName: Full=Fumarate reductase flavoprotein subunit; ... 135 3e-30
CP000469_401(CP000469|pid:none) Shewanella sp. ANA-3, complete g... 135 3e-30
CP000444_3595(CP000444|pid:none) Shewanella sp. MR-7, complete g... 135 4e-30
AP009389_1491(AP009389|pid:none) Pelotomaculum thermopropionicum... 135 5e-30
CP000821_4105(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 135 5e-30
BA000037_3097(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, ch... 134 1e-29
BA000011_758(BA000011|pid:none) Thermoplasma volcanium GSS1 DNA,... 133 2e-29
CP000767_965(CP000767|pid:none) Campylobacter curvus 525.92, com... 133 2e-29
CP000447_675(CP000447|pid:none) Shewanella frigidimarina NCIMB 4... 132 3e-29
CP001281_1448(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 132 3e-29
AJ621278_1(AJ621278|pid:none) Thermoproteus tenax frdA gene for ... 132 3e-29
CP000682_1100(CP000682|pid:none) Metallosphaera sedula DSM 5348,... 130 1e-28
B44954(B44954;S10165)fumarate reductase (EC 1.3.99.1) flavoprote... 129 3e-28
CR378673_294(CR378673|pid:none) Photobacterium profundum SS9; se... 129 3e-28
CP001358_1513(CP001358|pid:none) Desulfovibrio desulfuricans sub... 129 3e-28
CP000860_1853(CP000860|pid:none) Candidatus Desulforudis audaxvi... 129 4e-28
AL445066_72(AL445066|pid:none) Thermoplasma acidophilum complete... 129 4e-28
EU016599_35(EU016599|pid:none) Uncultured Group I marine crenarc... 128 5e-28
AF139922_1(AF139922|pid:none) Bos taurus succinate dehydrogenase... 127 1e-27
BX571662_68(BX571662|pid:none) Wolinella succinogenes, complete ... 127 1e-27
CP001087_3198(CP001087|pid:none) Desulfobacterium autotrophicum ... 125 3e-27
CP000568_2315(CP000568|pid:none) Clostridium thermocellum ATCC 2... 125 5e-27
CP000153_37(CP000153|pid:none) Sulfurimonas denitrificans DSM 12... 123 2e-26
CP000089_1765(CP000089|pid:none) Dechloromonas aromatica RCB, co... 123 2e-26
CP001348_3379(CP001348|pid:none) Clostridium cellulolyticum H10,... 123 2e-26
CP000767_1407(CP000767|pid:none) Campylobacter curvus 525.92, co... 122 3e-26
CP000478_1978(CP000478|pid:none) Syntrophobacter fumaroxidans MP... 122 5e-26
CP000112_1257(CP000112|pid:none) Desulfovibrio desulfuricans G20... 120 1e-25
AY423625_1(AY423625|pid:none) Rickettsia sp. RLO SLY succinate d... 120 1e-25
CP000792_1006(CP000792|pid:none) Campylobacter concisus 13826, c... 120 1e-25
CP000932_326(CP000932|pid:none) Campylobacter lari RM2100, compl... 119 3e-25
BX571660_281(BX571660|pid:none) Wolinella succinogenes, complete... 119 4e-25
CP000792_1422(CP000792|pid:none) Campylobacter concisus 13826, c... 117 1e-24
CP000025_478(CP000025|pid:none) Campylobacter jejuni RM1221, com... 117 1e-24
CP000102_177(CP000102|pid:none) Methanosphaera stadtmanae DSM 30... 117 1e-24
AL111168_406(AL111168|pid:none) Campylobacter jejuni subsp. jeju... 117 1e-24
CP000814_410(CP000814|pid:none) Campylobacter jejuni subsp. jeju... 115 3e-24
AL111168_378(AL111168|pid:none) Campylobacter jejuni subsp. jeju... 114 7e-24
CP000768_1276(CP000768|pid:none) Campylobacter jejuni subsp. doy... 114 7e-24
BA000030_4695(BA000030|pid:none) Streptomyces avermitilis MA-468... 114 1e-23
AK316025_1(AK316025|pid:none) Homo sapiens cDNA, FLJ78924 comple... 113 2e-23
AK299148_1(AK299148|pid:none) Homo sapiens cDNA FLJ58932 complet... 113 2e-23
CP000859_1484(CP000859|pid:none) Desulfococcus oleovorans Hxd3, ... 113 2e-23
AJ628040_2(AJ628040|pid:none) Campylobacter jejuni fumarate redu... 112 3e-23
(Q9X8N8) RecName: Full=L-aspartate oxidase; Short=LASPO... 112 5e-23
BX294139_181(BX294139|pid:none) Rhodopirellula baltica SH 1 comp... 111 8e-23
CP001146_584(CP001146|pid:none) Dictyoglomus thermophilum H-6-12... 110 1e-22
CP000249_4328(CP000249|pid:none) Frankia sp. CcI3, complete geno... 110 1e-22
CP001336_155(CP001336|pid:none) Desulfitobacterium hafniense DCB... 110 1e-22
BA000045_846(BA000045|pid:none) Gloeobacter violaceus PCC 7421 D... 110 2e-22
CP000141_2298(CP000141|pid:none) Carboxydothermus hydrogenoforma... 110 2e-22
CP000241_187(CP000241|pid:none) Helicobacter pylori HPAG1, compl... 108 4e-22
CP001217_193(CP001217|pid:none) Helicobacter pylori P12, complet... 108 4e-22
U78101_2(U78101|pid:none) Helicobacter pylori FrdC (frdC), FrdA ... 108 4e-22
(O06913) RecName: Full=Fumarate reductase flavoprotein subunit; ... 108 5e-22
CP001072_185(CP001072|pid:none) Helicobacter pylori Shi470, comp... 108 5e-22
AY618570_1(AY618570|pid:none) Mus musculus succinate dehydrogena... 108 7e-22
CP000360_2567(CP000360|pid:none) Acidobacteria bacterium Ellin34... 108 7e-22
AM260522_345(AM260522|pid:none) Helicobacter acinonychis str. Sh... 108 7e-22
(Q9ZMP0) RecName: Full=Fumarate reductase flavoprotein subunit; ... 108 7e-22
(Q8YXJ6) RecName: Full=L-aspartate oxidase; Short=LASPO... 107 9e-22
EU016632_46(EU016632|pid:none) Uncultured Group I marine crenarc... 107 1e-21
AP009389_223(AP009389|pid:none) Pelotomaculum thermopropionicum ... 107 1e-21
CP000828_3862(CP000828|pid:none) Acaryochloris marina MBIC11017,... 107 1e-21
BA000039_2407(BA000039|pid:none) Thermosynechococcus elongatus B... 107 2e-21
CP000316_894(CP000316|pid:none) Polaromonas sp. JS666, complete ... 106 3e-21
CP000155_1710(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 106 3e-21
AP009179_152(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic D... 105 3e-21
CU633749_2451(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 105 3e-21
CP000817_3875(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 105 4e-21
AP004799_5(AP004799|pid:none) Oryza sativa Japonica Group genomi... 105 4e-21
CP000488_870(CP000488|pid:none) Candidatus Ruthia magnifica str.... 104 8e-21
BC150558_1(BC150558|pid:none) Homo sapiens succinate dehydrogena... 104 8e-21
CP000360_1381(CP000360|pid:none) Acidobacteria bacterium Ellin34... 104 1e-20
CP000607_1193(CP000607|pid:none) Chlorobium phaeovibrioides DSM ... 104 1e-20
BT088423_1(BT088423|pid:none) Zea mays full-length cDNA clone ZM... 104 1e-20
BT063885_1(BT063885|pid:none) Zea mays full-length cDNA clone ZM... 104 1e-20
CP000252_1231(CP000252|pid:none) Syntrophus aciditrophicus SB, c... 104 1e-20
BT055032_1(BT055032|pid:none) Zea mays full-length cDNA clone ZM... 104 1e-20
CP000448_103(CP000448|pid:none) Syntrophomonas wolfei subsp. wol... 103 1e-20
CP001154_1(CP001154|pid:none) Laribacter hongkongensis HLHK9, co... 103 1e-20
AF299117_2(AF299117|pid:none) Desulfitobacterium dehalogenans fu... 103 2e-20
AM295250_761(AM295250|pid:none) Staphylococcus carnosus subsp. c... 103 2e-20
AE015929_841(AE015929|pid:none) Staphylococcus epidermidis ATCC ... 103 2e-20
CP001503_2722(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 103 2e-20
AE016825_3930(AE016825|pid:none) Chromobacterium violaceum ATCC ... 103 2e-20
CP001108_683(CP001108|pid:none) Prosthecochloris aestuarii DSM 2... 102 3e-20
CP000679_1698(CP000679|pid:none) Caldicellulosiruptor saccharoly... 102 3e-20
AE017282_1389(AE017282|pid:none) Methylococcus capsulatus str. B... 102 3e-20
CP000713_1945(CP000713|pid:none) Psychrobacter sp. PRwf-1, compl... 102 4e-20
BX571965_925(BX571965|pid:none) Burkholderia pseudomallei strain... 102 5e-20
CP000526_2590(CP000526|pid:none) Burkholderia mallei SAVP1 chrom... 102 5e-20
CP000124_1123(CP000124|pid:none) Burkholderia pseudomallei 1710b... 102 5e-20
CP000010_1936(CP000010|pid:none) Burkholderia mallei ATCC 23344 ... 102 5e-20
CP000113_4509(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 101 6e-20
CU459003_4256(CU459003|pid:none) Magnetospirillum gryphiswaldens... 101 6e-20
AP009152_45(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, co... 101 8e-20
(Q59767) RecName: Full=L-aspartate oxidase; Short=LASPO... 101 8e-20
CP001616_840(CP001616|pid:none) Tolumonas auensis DSM 9187, comp... 101 8e-20
CP000386_11(CP000386|pid:none) Rubrobacter xylanophilus DSM 9941... 100 1e-19
CP001343_87(CP001343|pid:none) Arthrobacter chlorophenolicus A6 ... 100 1e-19
AP006716_1813(AP006716|pid:none) Staphylococcus haemolyticus JCS... 100 1e-19
CP001291_385(CP001291|pid:none) Cyanothece sp. PCC 7424, complet... 100 1e-19
AM238663_436(AM238663|pid:none) Streptomyces ambofaciens ATCC 23... 100 2e-19
AM260479_2959(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 100 2e-19
CP000282_2248(CP000282|pid:none) Saccharophagus degradans 2-40, ... 100 2e-19
CP000096_556(CP000096|pid:none) Pelodictyon luteolum DSM 273, co... 100 2e-19
DQ178128_1(DQ178128|pid:none) Sus scrofa succinate dehydrogenase... 100 2e-19
CP000655_1100(CP000655|pid:none) Polynucleobacter necessarius su... 100 2e-19
CR954246_694(CR954246|pid:none) Pseudoalteromonas haloplanktis s... 100 2e-19
CP000432_824(CP000432|pid:none) Rhodococcus jostii RHA1 plasmid ... 100 2e-19
CP000509_3498(CP000509|pid:none) Nocardioides sp. JS614, complet... 99 3e-19
CP000127_2366(CP000127|pid:none) Nitrosococcus oceani ATCC 19707... 99 3e-19
CP000551_1256(CP000551|pid:none) Prochlorococcus marinus str. AS... 99 3e-19

>BT044695_1(BT044695|pid:none) Salmo salar clone ssal-rgf-501-013
Succinate dehydrogenase flavoprotein subunit,
mitochondrial precursor putative mRNA, complete cds.
Length = 659

Score = 329 bits (844), Expect = 1e-88
Identities = 169/265 (63%), Positives = 199/265 (75%), Gaps = 17/265 (6%)
Frame = +1

Query: 757 FAGVDVTKEPIPVIPTVHYNMGGIPTNYKGQVITQVDGKDKLVKGLYAAGESACVSVHGA 936
FAGVDVTKEPIPV+PTVHYNMGGIPTNYKGQVIT DG+DK+V GLYA GE+AC SVHGA
Sbjct: 385 FAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVITHPDGEDKVVPGLYACGEAACASVHGA 444

Query: 937 NRLGANSLLDIVVFGRAVANEIENTLAKDTPHKPLPPNAGEESIANIDAIRFSNGTRSTA 1116
NRLGANSLLD+VVFGRA A I +T PL P+AGEES+AN+D IRF++G T+
Sbjct: 445 NRLGANSLLDLVVFGRACALTIADTCTPGEKLSPLKPSAGEESVANLDKIRFADGNTRTS 504

Query: 1117 EIRLEMQKIMQRNAAVFRDGQVLKEGVELIDKCARSLINDLKTTDRTMIWNTDLIESLEL 1296
EIRL MQ+ MQ +AAVFR G VLKEG + +D +++ D+KT DR M+WNTDL+ESLEL
Sbjct: 505 EIRLNMQRTMQNHAAVFRTGDVLKEGCDKMDAIYQTM-EDIKTFDRGMVWNTDLVESLEL 563

Query: 1297 QNLMTQAVLTMHSAEARKESRGAHAREDYKERDD-----------------ANWMKHTLS 1425
QNLM AV T+HSAEARKESRGAHAREDYK+R D +W KHT+S
Sbjct: 564 QNLMLNAVQTIHSAEARKESRGAHAREDYKDRMDELDYARPLAGQERKPFHQHWRKHTMS 623

Query: 1426 YLDVNTGKVTLNYRPVVSETLDQSK 1500
+D TGKVTL YRPV+ +LDQ +
Sbjct: 624 TVDPKTGKVTLEYRPVIDTSLDQEE 648

Score = 257 bits (657), Expect = 7e-67
Identities = 117/187 (62%), Positives = 143/187 (76%)
Frame = +3

Query: 207 SRDYAVVDHTYDAIVVXXXXXXXXXXXXXTEKGYKTACITKLFPTRSHTVAAQGGINAAL 386
S Y VVDH +DA+VV +E G+ TAC+TKLFPTRSHTVAAQGGINAAL
Sbjct: 47 STQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAAL 106

Query: 387 GNADQDDWRWHAYDTVKGSDFLGDQDAIHYMCKEAVPTVLELEQYGVPFSRMDDGRIYQR 566
GN + DDWRWH YDTVKGSD+LGDQDAIHYM ++A V+ELE +G+PFSR +DG+IYQR
Sbjct: 107 GNMEGDDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRTEDGKIYQR 166

Query: 567 AFGGQSKNFGKGGHATRCCAAADRTGHALLHTLYGQAVKHNTKFFIEYFVTDLIMENGDX 746
AFGGQS FGKGG A RCC ADRTGH+LLHTLYG++++++T +F+EYF DL+ME+G+
Sbjct: 167 AFGGQSLKFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMEDGEC 226

Query: 747 XXXFRWC 767
C
Sbjct: 227 KGVIALC 233

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,327,424,209
Number of extensions: 44603936
Number of successful extensions: 128197
Number of sequences better than 10.0: 1160
Number of HSP's gapped: 125392
Number of HSP's successfully gapped: 1965
Length of query: 512
Length of database: 1,040,966,779
Length adjustment: 133
Effective length of query: 379
Effective length of database: 614,796,874
Effective search space: 233008015246
Effective search space used: 233008015246
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.68 gvh: 0.49 alm: 0.36 top: 0.53 tms: 0.00 mit: 0.39 mip: 0.06
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: mitochondrial
24.0 %: nuclear
20.0 %: cytoplasmic
4.0 %: cytoskeletal
4.0 %: vacuolar
4.0 %: plasma membrane

>> prediction for Contig-U10930-1 is mit

VS (DIR, S) 0
VH (FL, L) 5
VF (FL, S) 3
AH (FL, L) 1
AF (FL, S) 6
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 1
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0