Contig-U10892-1
Contig ID Contig-U10892-1
Contig update 2002.12.18
Contig sequence
>Contig-U10892-1 (Contig-U10892-1Q) /CSM_Contig/Contig-U10892-1Q.Seq.d
CACTGTTGGCCTACTGGAAACTCTTGCACATATTAAGAAAGTTGTACATA
TAAAGTGATAGTTAGTAGAATAGTAATAGTAACAGTGTAAAAGCTTTTTT
TAAAAGAAAAAAAAAAATAATAAAAATAATAAATTTAAAACTTGTTTAAA
TAAAACTACAAGAAAAAATAAAACAAAACACCTGTATAATATAAAGTAAA
AAGAAAAAAAAAATGTCAGAACCAGAATTAAAGGTTTCAGTATCACAATT
AGCACCAAGTGACAGAGAAGGTTGGTTAACAAAACAAGGNGGTTCAATTA
GAACATGGAGAAGAAGATGGTTCGTTTTAAAAGGAAAAAAATTGTTTTAT
TTCAAGAGTAAAGGTGATATTGAAGCAACAGGTTTAATTGAATTAGAACA
AAATTCATTTGTAAAGGAAGAAAAAGATAAAGATAAGAAAAAGAAATACA
TGTTCACAGTTGGAACATCAAAGAGAGTATTTTACATATTTGCAGAGACT
GAAACTGATATGAAACAATGGATGGAGTCAATTAAACGTAATTTANATGG
CGAAGGTGGCATGAAGAGTGGAGGTAACGA----------GATGTAGGTG
CAATCATTAACCCTGTAAAGATTGGTTCTTGGATTGATATGTCTGATAAA
GGTGGTATGGATGGTGGTTGGTATTTCCCTGTTGATATTCCATTAAAATT
AGCTATTGAAGCTTCTGATGCTGGCGAACCAACTCGTAAATTATCAGAAT
GGGCAGAATCAAATGAAGTTGTAAATTGTTATTCAATTGGTCGTGATATG
GGTGCTGCACCACCAAGACAAACTGAAACTAGATTTAAATTACCAGGTCC
AGATTTTATAGCACAATTAAATTTGGCAGTTGATGCATTCAAAACCTTTG
AATTCCCACCAATTCCATCAAATGCATTGGAAATTTTATATCAAAGTTCA
AATACTTTAGAGGCTGGTGGTTTATGTCTCAGTGTAATTACATCAAGTGA
AGGTTTCGTTAGATTAGGTCTTTTAATTCCAAAACCAACTCGTGATGTTG
TTGGTCAACTTTGTGAAATTGGTCAAGCTAACAGAGAAAGAATCTCCAAA
TTTGAAACAGCATTGGGTGGTTGTGGTCCAGCATTTGTTGAATTCCAATA
TTTACAAAAAGGTTTTGGTTATACCGTCTATAAGGAAGGTTTCGATATTG
TTTTCCATTATATGGTTGGTGAGGATCAATCCGAATAAAGGTTTCATCTT
TGTCAATTTTCCTTTTTGATGTTTACAATTATCCCTTTTTGACAAATATA
AATATTCCCGCTTTCATCAATGTTTAATAGTAATCATCTCGATATTTCAA
GATCTTTTCAAAATTTTGGATTGATTTAAAAAAAAAAAAAAAAAAAATGA
AAAAAAAAAAAA

Gap gap included
Contig length 1402
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 3786434
End point 3788143
Strand (PLUS/MINUS) PLUS
Number of clones 11
Number of EST 16
Link to clone list U10892
List of clone(s)

est1=AFJ845F,1,213
est2=AFG891F,13,116
est3=SFH365F,13,116
est4=SFJ828F,13,116
est5=CHE322F,95,292
est6=SFE287F,164,581
est7=AFJ845Z,582,1680
est8=AFG891Z,905,1679
est9=CFH383Z,905,1611
est10=SFJ839Z,999,1680
est11=AFI486Z,1017,1680
est12=SFJ828Z,1017,1621
est13=CFA421Z,1025,1668
est14=SFE287Z,1057,1678
est15=VSB895Z,1135,1727
est16=SFH365Z,1397,1604
Translated Amino Acid sequence
llaywkllhilrklyi*sds**nsnsnsvkaffkrkkkiikiinlklv*iklqekikqnt
cii*SKKKKKMSEPELKVSVSQLAPSDREGWLTKQGGSIRTWRRRWFVLKGKKLFYFKSK
GDIEATGLIELEQNSFVKEEKDKDKKKKYMFTVGTSKRVFYIFAETETDMKQWMESIKRN
LXGEGGMKSGGN---

---DVGAIINPVKIGSWIDMSDKGGMDGGWYFPVDIPLKLAIEASDAGEPTRKLSEWAES
NEVVNCYSIGRDMGAAPPRQTETRFKLPGPDFIAQLNLAVDAFKTFEFPPIPSNALEILY
QSSNTLEAGGLCLSVITSSEGFVRLGLLIPKPTRDVVGQLCEIGQANRERISKFETALGG
CGPAFVEFQYLQKGFGYTVYKEGFDIVFHYMVGEDQSE*rfhlcqfsflmftiipf*qi*
ifplssmfnsnhldisrsfqnfgli*kkkkkk*kkkk


Translated Amino Acid sequence (All Frames)
Frame A:
hcwptgnscty*esctykvivsrivivtv*klflkekkk**k**i*nlfk*nykkk*nkt
pv*ykvkrkkkcqnqn*rfqyhn*hqvtekvg*qnkxvqlehgeedgsf*kekncfisrv
kvilkqqv*ln*nkihl*rkkkikirkrntcsqlehqreyftylqrlkli*nngwsqlnv
ixmakva*rvevt---

---DVGAIINPVKIGSWIDMSDKGGMDGGWYFPVDIPLKLAIEASDAGEPTRKLSEWAES
NEVVNCYSIGRDMGAAPPRQTETRFKLPGPDFIAQLNLAVDAFKTFEFPPIPSNALEILY
QSSNTLEAGGLCLSVITSSEGFVRLGLLIPKPTRDVVGQLCEIGQANRERISKFETALGG
CGPAFVEFQYLQKGFGYTVYKEGFDIVFHYMVGEDQSE*rfhlcqfsflmftiipf*qi*
ifplssmfnsnhldisrsfqnfgli*kkkkkk*kkkk

Frame B:
tvglletlahikkvvhik**lve****qcksff*kkkknnknnkfktclnkttrknktkh
lynik*kekknvrtrikgfsitistk*qrrlvnktrxfn*nmekkmvrfkrkkivlfqe*
r*y*snrfn*irtkfickgrkr*r*ekeihvhswnikesilhicrd*n*yetmdgvn*t*
fxwrrwheewr*r---

---m*vqsltl*rlvlgliclikvvwmvvgisllifh*n*llkllmlanqlvnyqngqnq
mkl*iviqlvviwvlhhqdklkldlnyqvqil*hn*iwqlmhskplnshqfhqmhwkfyi
kvqil*rlvvyvsv*lhqvkvsld*vf*fqnqlvmllvnfvklvkltekespnlkqhwvv
vvqhllnsniykkvlvipsirkvsilfsiiwlvrinpnkgfifvnfpf*clqlslfdkyk
ysrfhqcliviisifqdlfkild*fkkkkkknekkk

Frame C:
llaywkllhilrklyi*sds**nsnsnsvkaffkrkkkiikiinlklv*iklqekikqnt
cii*SKKKKKMSEPELKVSVSQLAPSDREGWLTKQGGSIRTWRRRWFVLKGKKLFYFKSK
GDIEATGLIELEQNSFVKEEKDKDKKKKYMFTVGTSKRVFYIFAETETDMKQWMESIKRN
LXGEGGMKSGGN---

---crcnh*pckdwfld*yv**rwygwwlvfpc*ysikisy*sf*cwrtns*iirmgrik
*sckllfnws*ygccttktn*n*i*itrsrfystikfgs*ciqnl*iptnsikcignfis
kfkyfrgwwfmsqcnyik*rfr*irsfnsktns*ccwstl*nwss*qrknlqi*nsigwl
wssic*ipiftkrfwlyrl*grfrycfplygw*gsirikvsslsiflfdvynypfltnin
ipafinv***ssryfkifskfwidlkkkkkkmkkkk

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U10892-1 (Contig-U10892-1Q)
/CSM_Contig/Contig-U10892-1Q.Seq.d
(1412 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U10892-1 (Contig-U10892-1Q) /CSM_Contig/Conti... 1780 0.0
Contig-U10460-1 (Contig-U10460-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U08172-1 (Contig-U08172-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U10519-1 (Contig-U10519-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U10343-1 (Contig-U10343-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U09968-1 (Contig-U09968-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U13927-1 (Contig-U13927-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U13924-1 (Contig-U13924-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U13706-1 (Contig-U13706-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U13216-1 (Contig-U13216-1Q) /CSM_Contig/Conti... 36 0.10

>Contig-U10892-1 (Contig-U10892-1Q) /CSM_Contig/Contig-U10892-1Q.Seq.d
Length = 1412

Score = 1780 bits (898), Expect = 0.0
Identities = 931/931 (100%)
Strand = Plus / Plus


Query: 447 tacatgttcacagttggaacatcaaagagagtattttacatatttgcagagactgaaact 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tacatgttcacagttggaacatcaaagagagtattttacatatttgcagagactgaaact 506


Query: 507 gatatgaaacaatggatggagtcaattaaacgtaatttanatggcgaaggtggcatgaag 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gatatgaaacaatggatggagtcaattaaacgtaatttanatggcgaaggtggcatgaag 566


Query: 567 agtggaggtaacgannnnnnnnnngatgtaggtgcaatcattaaccctgtaaagattggt 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 agtggaggtaacgannnnnnnnnngatgtaggtgcaatcattaaccctgtaaagattggt 626


Query: 627 tcttggattgatatgtctgataaaggtggtatggatggtggttggtatttccctgttgat 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tcttggattgatatgtctgataaaggtggtatggatggtggttggtatttccctgttgat 686


Query: 687 attccattaaaattagctattgaagcttctgatgctggcgaaccaactcgtaaattatca 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 attccattaaaattagctattgaagcttctgatgctggcgaaccaactcgtaaattatca 746


Query: 747 gaatgggcagaatcaaatgaagttgtaaattgttattcaattggtcgtgatatgggtgct 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gaatgggcagaatcaaatgaagttgtaaattgttattcaattggtcgtgatatgggtgct 806


Query: 807 gcaccaccaagacaaactgaaactagatttaaattaccaggtccagattttatagcacaa 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 gcaccaccaagacaaactgaaactagatttaaattaccaggtccagattttatagcacaa 866


Query: 867 ttaaatttggcagttgatgcattcaaaacctttgaattcccaccaattccatcaaatgca 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 ttaaatttggcagttgatgcattcaaaacctttgaattcccaccaattccatcaaatgca 926


Query: 927 ttggaaattttatatcaaagttcaaatactttagaggctggtggtttatgtctcagtgta 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 ttggaaattttatatcaaagttcaaatactttagaggctggtggtttatgtctcagtgta 986


Query: 987 attacatcaagtgaaggtttcgttagattaggtcttttaattccaaaaccaactcgtgat 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 attacatcaagtgaaggtttcgttagattaggtcttttaattccaaaaccaactcgtgat 1046


Query: 1047 gttgttggtcaactttgtgaaattggtcaagctaacagagaaagaatctccaaatttgaa 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 gttgttggtcaactttgtgaaattggtcaagctaacagagaaagaatctccaaatttgaa 1106


Query: 1107 acagcattgggtggttgtggtccagcatttgttgaattccaatatttacaaaaaggtttt 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 acagcattgggtggttgtggtccagcatttgttgaattccaatatttacaaaaaggtttt 1166


Query: 1167 ggttataccgtctataaggaaggtttcgatattgttttccattatatggttggtgaggat 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1167 ggttataccgtctataaggaaggtttcgatattgttttccattatatggttggtgaggat 1226


Query: 1227 caatccgaataaaggtttcatctttgtcaattttcctttttgatgtttacaattatccct 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1227 caatccgaataaaggtttcatctttgtcaattttcctttttgatgtttacaattatccct 1286


Query: 1287 ttttgacaaatataaatattcccgctttcatcaatgtttaatagtaatcatctcgatatt 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1287 ttttgacaaatataaatattcccgctttcatcaatgtttaatagtaatcatctcgatatt 1346


Query: 1347 tcaagatcttttcaaaattttggattgattt 1377
|||||||||||||||||||||||||||||||
Sbjct: 1347 tcaagatcttttcaaaattttggattgattt 1377


Score = 345 bits (174), Expect = 8e-95
Identities = 191/198 (96%)
Strand = Plus / Plus


Query: 214 tgtcagaaccagaattaaaggtttcagtatcacaattagcaccaagtgacagagaaggtt 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 tgtcagaaccagaattaaaggtttcagtatcacaattagcaccaagtgacagagaaggtt 273


Query: 274 ggttaacaaaacaaggnggttcaattagaacatggagaagaagatggttcgttttaaaag 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ggttaacaaaacaaggnggttcaattagaacatggagaagaagatggttcgttttaaaag 333


Query: 334 gnnnnnnnttgttttatttcaagagtaaaggtgatattgaagcaacaggtttaattgaat 393
| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gaaaaaaattgttttatttcaagagtaaaggtgatattgaagcaacaggtttaattgaat 393


Query: 394 tagaacaaaattcatttg 411
||||||||||||||||||
Sbjct: 394 tagaacaaaattcatttg 411


Score = 198 bits (100), Expect = 1e-50
Identities = 100/100 (100%)
Strand = Plus / Plus


Query: 1 cactgttggcctactggaaactcttgcacatattaagaaagttgtacatataaagtgata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cactgttggcctactggaaactcttgcacatattaagaaagttgtacatataaagtgata 60


Query: 61 gttagtagaatagtaatagtaacagtgtaaaagctttttt 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttagtagaatagtaatagtaacagtgtaaaagctttttt 100


>Contig-U10460-1 (Contig-U10460-1Q) /CSM_Contig/Contig-U10460-1Q.Seq.d
Length = 331

Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 1 cactgttggcctactggaaact 22
||||||||||||||||||||||
Sbjct: 1 cactgttggcctactggaaact 22


>Contig-U08172-1 (Contig-U08172-1Q) /CSM_Contig/Contig-U08172-1Q.Seq.d
Length = 1818

Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 311 aagaagatggttcgttttaaaa 332
||||||||||||||||||||||
Sbjct: 1162 aagaagatggttcgttttaaaa 1183


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,467
Number of Sequences: 6905
Number of extensions: 13467
Number of successful extensions: 1801
Number of sequences better than 10.0: 546
length of query: 1412
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1396
effective length of database: 5,564,391
effective search space: 7767889836
effective search space used: 7767889836
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.22
Homology vs DNA
Query= Contig-U10892-1 (Contig-U10892-1Q) /CSM_Contig/Contig-U10892-1Q.Seq.d
(1412 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ342611) Dictyostelium discoideum cDNA clone:dda14f24, 3' ... 1534 0.0 1
(BJ346747) Dictyostelium discoideum cDNA clone:dda24l22, 3' ... 1402 0.0 1
(BJ402083) Dictyostelium discoideum cDNA clone:dds20n10, 3' ... 1352 0.0 1
(BJ373119) Dictyostelium discoideum cDNA clone:ddc15f21, 3' ... 1346 0.0 1
(BJ344011) Dictyostelium discoideum cDNA clone:dda17l22, 3' ... 1316 0.0 1
(BJ346540) Dictyostelium discoideum cDNA clone:dda24c11, 3' ... 1279 0.0 1
(BJ344751) Dictyostelium discoideum cDNA clone:dda20j12, 3' ... 1269 0.0 3
(BJ400363) Dictyostelium discoideum cDNA clone:dds9m22, 3' e... 1233 0.0 1
(BJ371701) Dictyostelium discoideum cDNA clone:ddc1j06, 3' e... 1223 0.0 1
(BJ402062) Dictyostelium discoideum cDNA clone:dds20h08, 3' ... 1170 0.0 1
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 1130 0.0 1
(AU262326) Dictyostelium discoideum vegetative cDNA clone:VS... 1104 0.0 1
(BJ388509) Dictyostelium discoideum cDNA clone:dds9m22, 5' e... 260 e-165 3
(BJ400939) Dictyostelium discoideum cDNA clone:dds15b17, 3' ... 200 2e-68 3
(BJ327422) Dictyostelium discoideum cDNA clone:dda20j12, 5' ... 198 4e-46 1
(BJ391186) Dictyostelium discoideum cDNA clone:dds15b17, 5' ... 165 6e-36 1
(BJ389857) Dictyostelium discoideum cDNA clone:dds20h08, 5' ... 165 6e-36 1
(BJ325494) Dictyostelium discoideum cDNA clone:dda14f24, 5' ... 165 6e-36 1
(BJ364137) Dictyostelium discoideum cDNA clone:ddc30l05, 5' ... 133 4e-31 2
(AM624712) Entamoeba dispar GSS, clone dispar111g02.q1k. 38 4e-04 3
(AM636231) Entamoeba dispar GSS, clone dispar35c05.q1k. 42 0.054 3
(CX094398) EHAFY58TR E. histolytica Normalized cDNA library ... 40 0.14 3
(CX091909) EHAEZ31TR E. histolytica Normalized cDNA library ... 40 0.14 3
(CX086369) EHACJ05TR E. histolytica Normalized cDNA library ... 40 0.16 3
(AC188840) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB... 34 0.16 7
(CX088044) EHADA66TR E. histolytica Normalized cDNA library ... 40 0.17 3
(CX094141) EHAFV01TR E. histolytica Normalized cDNA library ... 40 0.17 3
(CX096600) EHAGU83TR E. histolytica Normalized cDNA library ... 40 0.18 3
(CX097203) EHAH345TR E. histolytica Normalized cDNA library ... 40 0.20 3
(CX084235) EHABN62TR E. histolytica Normalized cDNA library ... 40 0.21 3
(CX092487) EHAF756TR E. histolytica Normalized cDNA library ... 40 0.21 3
(CX088351) EHADG89TR E. histolytica Normalized cDNA library ... 40 0.21 3
(CX089925) EHAE592TR E. histolytica Normalized cDNA library ... 40 0.21 3
(CX094602) EHAG160TR E. histolytica Normalized cDNA library ... 40 0.22 3
(CJ476542) Macaca fascicularis mRNA, clone: QtrA-10940, 5' e... 50 0.23 1
(AZ543569) ENTFS08TF Entamoeba histolytica Sheared DNA Entam... 40 0.25 3
(AM660581) Entamoeba moshkovskii FIC GSS, clone mosh100e06.p1k. 34 0.25 3
(CX083457) EHABC02TR E. histolytica Normalized cDNA library ... 40 0.25 3
(CX098493) EHAHM53TR E. histolytica Normalized cDNA library ... 40 0.25 3
(CX081866) EHAAO24TR E. histolytica Normalized cDNA library ... 40 0.25 3
(CX094217) EHAFW14TR E. histolytica Normalized cDNA library ... 40 0.25 3
(CX082828) EHAB254TR E. histolytica Normalized cDNA library ... 40 0.25 3
(CX095413) EHAGD33TR E. histolytica Normalized cDNA library ... 40 0.25 3
(AM650752) Entamoeba moshkovskii FIC GSS, clone mosh082b07.p1k. 34 0.26 3
(CJ483321) Macaca fascicularis mRNA, clone: QtsA-10787, 5' e... 44 0.29 2
(BJ390582) Dictyostelium discoideum cDNA clone:dds22o24, 5' ... 34 0.31 3
(CJ460211) Macaca fascicularis mRNA, clone: QmoA-12560, 5' e... 36 0.66 2
(AC221522) Bos taurus clone CH240-408N6, WORKING DRAFT SEQUE... 48 0.91 1
(EJ402333) 1093012063776 Global-Ocean-Sampling_GS-28-01-01-1... 48 0.91 1
(DX278631) OR_ABa0177F14.f OR_ABa Oryza ridleyi genomic clon... 48 0.91 1
(CX422008) JGI_XZG62711.rev NIH_XGC_tropGas7 Xenopus (Silura... 48 0.91 1
(CT822225) Paramecium tetraurelia 5-PRIME EST from clone LK0... 48 0.91 1
(CT820193) Paramecium tetraurelia 5-PRIME EST from clone LK0... 48 0.91 1
(CT768754) Paramecium tetraurelia 5-PRIME EST from clone LK0... 48 0.91 1
(CJ486493) Macaca fascicularis mRNA, clone: QtsA-14122, 5' e... 48 0.91 1
(CU469550) Medicago truncatula chromosome 5 clone mth4-43k19... 34 1.8 2
(BJ416812) Dictyostelium discoideum cDNA clone:ddv27l09, 5' ... 42 2.1 2
(BH150116) ENTPM40TR Entamoeba histolytica Sheared DNA Entam... 34 2.4 2
(BH162724) ENTSF21TR Entamoeba histolytica Sheared DNA Entam... 34 2.4 2
(AZ688662) ENTJZ22TR Entamoeba histolytica Sheared DNA Entam... 34 2.4 2
(BH149924) ENTPR18TR Entamoeba histolytica Sheared DNA Entam... 34 2.4 2
(CJ481578) Macaca fascicularis mRNA, clone: QtrA-17276, 5' e... 34 2.4 2
(CJ454929) Macaca fascicularis mRNA, clone: QflA-20689, 5' e... 34 2.4 2
(DW016023) EST1224984 MTY Medicago truncatula cDNA clone MTY... 34 2.4 2
(DW017331) EST1226292 MTY Medicago truncatula cDNA clone MTY... 34 2.4 2
(EV260410) MTYE739TF JCVI-MT1 Medicago truncatula cDNA 5', m... 34 2.4 2
(AJ498925) Medicago truncatula EST, clone mt--acc955210b10. 34 2.5 2
(AJ502435) Medicago truncatula EST, clone mtgmadc120020h02. 34 2.5 2
(AL388935) Medicago truncatula EST MtBC51F11R1 : T7 end of c... 34 2.5 2
(AW684250) NF014F03NR1F1000 Nodulated root Medicago truncatu... 34 2.5 2
(AW685159) NF026B11NR1F1000 Nodulated root Medicago truncatu... 34 2.5 2
(BM815122) EST593216 BNIR Medicago truncatula/Meloidogyne in... 34 2.5 2
(AJ503917) Medicago truncatula EST, clone mtgmadc120039h03. 34 2.5 2
(AJ503205) Medicago truncatula EST, clone mtgmadc120031a11. 34 2.5 2
(BJ327337) Dictyostelium discoideum cDNA clone:dda20g02, 5' ... 36 2.6 2
(BJ363473) Dictyostelium discoideum cDNA clone:ddc26i19, 5' ... 36 3.2 2
(BJ415511) Dictyostelium discoideum cDNA clone:ddv22g19, 5' ... 40 3.3 2
(AC007478) Arabidopsis thaliana BAC F15A18 from chromosome V... 46 3.6 1
(AC007123) Arabidopsis thaliana BAC F21A20 from chromosome V... 46 3.6 1
(CS609809) Sequence 254 from Patent EP1795597. 46 3.6 1
(BD186902) Nucleic acids isolated from neuroblastoma. 46 3.6 1
(BD100276) Novel genes cloned in humanneuroblastoma and frag... 46 3.6 1
(BD020338) Novel gene and novel gene fragment cloned in huma... 46 3.6 1
(AC218350) Bos taurus clone CH240-286F18, WORKING DRAFT SEQU... 46 3.6 1
(FH963816) CHO_OF6778xn05f1.ab1 CHO_OF6 Nicotiana tabacum ge... 46 3.6 1
(ED167594) AUAC-aah28h11.g1 Ascaris suum whole genome shotgu... 46 3.6 1
(DX330349) OR_ABa0252O01.r OR_ABa Oryza ridleyi genomic clon... 46 3.6 1
(DX290723) OR_ABa0194F17.r OR_ABa Oryza ridleyi genomic clon... 46 3.6 1
(AG725760) Macaca fuscata fuscata DNA, clone: MSB2-178L20_R,... 46 3.6 1
(CG750941) P045-2-G11.yb Ppa EcoRI BAC Library Pristionchus ... 46 3.6 1
(BZ764372) SALK_124544.41.15.n Arabidopsis thaliana TDNA ins... 46 3.6 1
(EE850547) 020829OSI1010057HT OSI Ovis aries cDNA, mRNA sequ... 46 3.6 1
(EE780984) 020709OMGB11041067HT OMGB1 Ovis aries cDNA, mRNA ... 46 3.6 1
(CJ489420) Macaca fascicularis mRNA, clone: QtsA-17169, 5' e... 46 3.6 1
(CJ459439) Macaca fascicularis mRNA, clone: QmoA-11654, 5' e... 46 3.6 1
(CJ445487) Macaca fascicularis mRNA, clone: QflA-10632, 5' e... 46 3.6 1
(CJ445197) Macaca fascicularis mRNA, clone: QflA-10330, 5' e... 46 3.6 1
(CJ441743) Macaca fascicularis mRNA, clone: QccE-19228, 5' e... 46 3.6 1
(CJ433868) Macaca fascicularis mRNA, clone: QccE-10837, 5' e... 46 3.6 1
(CI243599) Oryza sativa Japonica Group cDNA, clone: 042-M100... 46 3.6 1

>(BJ342611) Dictyostelium discoideum cDNA clone:dda14f24, 3' end,
single read.
Length = 775

Score = 1534 bits (774), Expect = 0.0
Identities = 774/774 (100%)
Strand = Plus / Minus


Query: 592 atgtaggtgcaatcattaaccctgtaaagattggttcttggattgatatgtctgataaag 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 atgtaggtgcaatcattaaccctgtaaagattggttcttggattgatatgtctgataaag 715


Query: 652 gtggtatggatggtggttggtatttccctgttgatattccattaaaattagctattgaag 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 gtggtatggatggtggttggtatttccctgttgatattccattaaaattagctattgaag 655


Query: 712 cttctgatgctggcgaaccaactcgtaaattatcagaatgggcagaatcaaatgaagttg 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 cttctgatgctggcgaaccaactcgtaaattatcagaatgggcagaatcaaatgaagttg 595


Query: 772 taaattgttattcaattggtcgtgatatgggtgctgcaccaccaagacaaactgaaacta 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 taaattgttattcaattggtcgtgatatgggtgctgcaccaccaagacaaactgaaacta 535


Query: 832 gatttaaattaccaggtccagattttatagcacaattaaatttggcagttgatgcattca 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gatttaaattaccaggtccagattttatagcacaattaaatttggcagttgatgcattca 475


Query: 892 aaacctttgaattcccaccaattccatcaaatgcattggaaattttatatcaaagttcaa 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 aaacctttgaattcccaccaattccatcaaatgcattggaaattttatatcaaagttcaa 415


Query: 952 atactttagaggctggtggtttatgtctcagtgtaattacatcaagtgaaggtttcgtta 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 atactttagaggctggtggtttatgtctcagtgtaattacatcaagtgaaggtttcgtta 355


Query: 1012 gattaggtcttttaattccaaaaccaactcgtgatgttgttggtcaactttgtgaaattg 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gattaggtcttttaattccaaaaccaactcgtgatgttgttggtcaactttgtgaaattg 295


Query: 1072 gtcaagctaacagagaaagaatctccaaatttgaaacagcattgggtggttgtggtccag 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gtcaagctaacagagaaagaatctccaaatttgaaacagcattgggtggttgtggtccag 235


Query: 1132 catttgttgaattccaatatttacaaaaaggttttggttataccgtctataaggaaggtt 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 catttgttgaattccaatatttacaaaaaggttttggttataccgtctataaggaaggtt 175


Query: 1192 tcgatattgttttccattatatggttggtgaggatcaatccgaataaaggtttcatcttt 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 tcgatattgttttccattatatggttggtgaggatcaatccgaataaaggtttcatcttt 115


Query: 1252 gtcaattttcctttttgatgtttacaattatccctttttgacaaatataaatattcccgc 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 gtcaattttcctttttgatgtttacaattatccctttttgacaaatataaatattcccgc 55


Query: 1312 tttcatcaatgtttaatagtaatcatctcgatatttcaagatcttttcaaaatt 1365
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 tttcatcaatgtttaatagtaatcatctcgatatttcaagatcttttcaaaatt 1

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,411,127,364
Number of extensions: 84060268
Number of successful extensions: 6469527
Number of sequences better than 10.0: 126
Length of query: 1412
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1388
Effective length of database: 97,308,875,965
Effective search space: 135064719839420
Effective search space used: 135064719839420
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.28
Homology vs Protein
Query= Contig-U10892-1 (Contig-U10892-1Q) /CSM_Contig/Contig-U10892-1Q.Seq.d
(1412 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC116986_113(AC116986|pid:none) Dictyostelium discoideum chromos... 441 e-122
BT026166_1(BT026166|pid:none) Bos taurus Rho GTPase activating p... 72 5e-11
BT088093_1(BT088093|pid:none) Zea mays full-length cDNA clone ZM... 71 8e-11
(Q5U2Z7) RecName: Full=Rho GTPase-activating protein 24; AltName... 71 8e-11
BC047918_1(BC047918|pid:none) Homo sapiens Rho GTPase activating... 71 1e-10
(Q8N264) RecName: Full=Rho GTPase-activating protein 24; AltName... 71 1e-10
AK091196_1(AK091196|pid:none) Homo sapiens cDNA FLJ33877 fis, cl... 71 1e-10
AM472375_2(AM472375|pid:none) Vitis vinifera contig VV78X002492.... 71 1e-10
AK072489_1(AK072489|pid:none) Oryza sativa Japonica Group cDNA c... 70 2e-10
BT071749_1(BT071749|pid:none) Picea sitchensis clone WS0451_O16 ... 69 5e-10
BT071037_1(BT071037|pid:none) Picea sitchensis clone WS02766_P14... 69 5e-10
EF145537_1(EF145537|pid:none) Populus trichocarpa clone WS01125_... 68 7e-10
AB005237_11(AB005237|pid:none) Arabidopsis thaliana genomic DNA,... 67 2e-09
(Q7Z5H3) RecName: Full=Rho GTPase-activating protein 22; AltName... 66 3e-09
AK293579_1(AK293579|pid:none) Homo sapiens cDNA FLJ56006 complet... 66 3e-09
U78755_1(U78755|pid:none) Dictyostelium discoideum SecG (secG) m... 65 6e-09
(Q54KA7) RecName: Full=Ankyrin repeat, PH and SEC7 domain contai... 65 6e-09
AE014298_127(AE014298|pid:none) Drosophila melanogaster chromoso... 64 1e-08
(Q9W5D0) RecName: Full=Uncharacterized protein CG42248; 64 1e-08
(Q8BL80) RecName: Full=Rho GTPase-activating protein 22; AltName... 64 1e-08
AC135421_4(AC135421|pid:none) Oryza sativa (japonica cultivar-gr... 64 2e-08
AE014134_3647(AE014134|pid:none) Drosophila melanogaster chromos... 62 7e-08
AE014134_3648(AE014134|pid:none) Drosophila melanogaster chromos... 62 7e-08
(Q9ST43) RecName: Full=Pleckstrin homology domain-containing pro... 61 9e-08
BX571960_5(BX571960|pid:none) Zebrafish DNA sequence from clone ... 61 9e-08
AB005903_1(AB005903|pid:none) Arabidopsis thaliana AtPH1 mRNA, c... 61 9e-08
AK313728_1(AK313728|pid:none) Homo sapiens cDNA, FLJ94328, highl... 61 1e-07
AC004895_2(AC004895|pid:none) Homo sapiens PAC clone RP4-810E6 f... 61 1e-07
AK168566_1(AK168566|pid:none) Mus musculus 16 days embryo kidney... 61 1e-07
(O08967) RecName: Full=Cytohesin-3; AltName: Full=PH, SEC7 and c... 61 1e-07
AC004895_1(AC004895|pid:none) Homo sapiens PAC clone RP4-810E6 f... 61 1e-07
BC125677_1(BC125677|pid:none) Xenopus tropicalis hypothetical pr... 61 1e-07
(Q80YW0) RecName: Full=Cytohesin-4; AltName: Full=PH, SEC7 and c... 60 1e-07
(Q8N4B1) RecName: Full=Protein FAM109A; &BC034809_1(BC034809|pi... 60 1e-07
AY574952_1(AY574952|pid:none) Danio rerio cytohesin 1-like prote... 60 1e-07
EU194251_1(EU194251|pid:none) Sus scrofa cytohesin 2 mRNA, compl... 60 1e-07
AK304453_1(AK304453|pid:none) Homo sapiens cDNA FLJ54256 complet... 60 1e-07
BC018505_1(BC018505|pid:none) Mus musculus cytohesin 4, mRNA (cD... 60 1e-07
AK152306_1(AK152306|pid:none) Mus musculus bone marrow macrophag... 60 1e-07
AK315052_1(AK315052|pid:none) Homo sapiens cDNA, FLJ96001, highl... 60 1e-07
AF125362_2(AF125362|pid:none) Homo sapiens cytohesin 1 gene, exo... 60 1e-07
BC059497_1(BC059497|pid:none) Danio rerio zgc:73134, mRNA (cDNA ... 60 1e-07
AK299344_1(AK299344|pid:none) Homo sapiens cDNA FLJ61356 complet... 60 1e-07
AB013464_1(AB013464|pid:none) Mus musculus CLM1-A mRNA for cytoh... 60 1e-07
BT059417_1(BT059417|pid:none) Salmo salar clone ssal-rgf-541-375... 60 2e-07
AB095948_1(AB095948|pid:none) Homo sapiens mRNA for KIAA2028 pro... 60 2e-07
(Q8IVE3) RecName: Full=Pleckstrin homology domain-containing fam... 60 2e-07
AL833400_1(AL833400|pid:none) Homo sapiens mRNA; cDNA DKFZp313A1... 60 2e-07
AK029252_1(AK029252|pid:none) Mus musculus 0 day neonate head cD... 60 2e-07
BC125583_1(BC125583|pid:none) Mus musculus pleckstrin homology d... 60 2e-07
AB118104_1(AB118104|pid:none) Entamoeba histolytica gene for hyp... 60 2e-07
AL832207_1(AL832207|pid:none) Homo sapiens mRNA; cDNA DKFZp686J0... 60 2e-07
AJ720581_1(AJ720581|pid:none) Gallus gallus mRNA for hypothetica... 59 3e-07
(Q00IB7) RecName: Full=Pleckstrin homology domain-containing fam... 59 6e-07
AK130576_1(AK130576|pid:none) Homo sapiens cDNA FLJ27066 fis, cl... 59 6e-07
AC117176_43(AC117176|pid:none) Dictyostelium discoideum chromoso... 58 7e-07
AK169584_1(AK169584|pid:none) Mus musculus 2 days neonate thymus... 58 7e-07
AK145745_1(AK145745|pid:none) Mus musculus blastocyst blastocyst... 58 7e-07
A68112_1(A68112|pid:none) Sequence 21 from Patent WO9745538. 58 7e-07
AF163255_1(AF163255|pid:none) Mus musculus adaptor protein DAPP1... 58 7e-07
AP003289_1(AP003289|pid:none) Oryza sativa Japonica Group genomi... 58 9e-07
AK002145_1(AK002145|pid:none) Homo sapiens cDNA FLJ11283 fis, cl... 58 9e-07
(Q9UN19) RecName: Full=Dual adapter for phosphotyrosine and 3-ph... 57 1e-06
BC123550_1(BC123550|pid:none) Bos taurus dual adaptor of phospho... 57 1e-06
A68114_1(A68114|pid:none) Sequence 23 from Patent WO9745538. 57 1e-06
AB385228_1(AB385228|pid:none) Synthetic construct DNA, clone: pF... 57 1e-06
BC089655_1(BC089655|pid:none) Xenopus tropicalis dual adaptor of... 57 1e-06
(O43739) RecName: Full=Cytohesin-3; AltName: Full=PH, SEC7 and c... 57 2e-06
AK296914_1(AK296914|pid:none) Homo sapiens cDNA FLJ59923 complet... 56 3e-06
AB013467_1(AB013467|pid:none) Mus musculus CLM2-A mRNA for cytoh... 56 3e-06
BC074395_1(BC074395|pid:none) Xenopus laevis MGC84366 protein, m... 56 3e-06
(Q15438) RecName: Full=Cytohesin-1; AltName: Full=PH, SEC7 and c... 56 3e-06
AY128672_1(AY128672|pid:none) Drosophila pseudoobscura daughter ... 56 3e-06
AF125362_1(AF125362|pid:none) Homo sapiens cytohesin 1 gene, exo... 56 3e-06
BT059690_1(BT059690|pid:none) Salmo salar clone ssal-rgf-001-101... 56 3e-06
AB013469_2(AB013469|pid:none) Mus musculus CLM2 gene for cytohes... 56 3e-06
AK158216_1(AK158216|pid:none) Mus musculus adult inner ear cDNA,... 56 3e-06
U59752_1(U59752|pid:none) Human Sec7p-like protein mRNA, partial... 56 3e-06
AC116963_26(AC116963|pid:none) Dictyostelium discoideum chromoso... 56 4e-06
CR380949_67(CR380949|pid:none) Candida glabrata strain CBS138 ch... 55 5e-06
BT080786_1(BT080786|pid:none) Caligus clemensi clone ccle-evs-51... 55 6e-06
BX640463_1(BX640463|pid:none) Zebrafish DNA sequence from clone ... 55 6e-06
BT080347_1(BT080347|pid:none) Caligus clemensi clone ccle-evs-50... 55 6e-06
(Q8VC98) RecName: Full=Pleckstrin homology domain-containing fam... 55 8e-06
BC105510_1(BC105510|pid:none) Bos taurus Rho GTPase activating p... 55 8e-06
CR954212_114(CR954212|pid:none) Ostreococcus tauri strain OTTH05... 55 8e-06
AY128671_1(AY128671|pid:none) Drosophila virilis daughter of sev... 54 1e-05
CU928167_256(CU928167|pid:none) Kluyveromyces thermotolerans str... 54 1e-05
BC064601_1(BC064601|pid:none) Homo sapiens pleckstrin homology d... 54 1e-05
AK295896_1(AK295896|pid:none) Homo sapiens cDNA FLJ56902 complet... 54 1e-05
BC063310_1(BC063310|pid:none) Homo sapiens pleckstrin homology d... 54 1e-05
(Q9HD67) RecName: Full=Myosin-X; AltName: Full=Unconventional my... 54 2e-05
AF132021_1(AF132021|pid:none) Homo sapiens myosin X (MYO10) mRNA... 54 2e-05
AK316138_1(AK316138|pid:none) Homo sapiens cDNA, FLJ79037 comple... 54 2e-05
BC024692_1(BC024692|pid:none) Mus musculus myosin X, mRNA (cDNA ... 54 2e-05
BC156151_1(BC156151|pid:none) Synthetic construct Mus musculus c... 54 2e-05
AL832428_1(AL832428|pid:none) Homo sapiens mRNA; cDNA DKFZp762A0... 54 2e-05
AX405628_1(AX405628|pid:none) Sequence 43 from Patent WO0222660. 54 2e-05
AB018342_1(AB018342|pid:none) Homo sapiens mRNA for KIAA0799 pro... 54 2e-05
AK122371_1(AK122371|pid:none) Mus musculus mRNA for mKIAA0799 pr... 54 2e-05
A59297(A59297) myosin X - mouse &AJ249706_1(AJ249706|pid:none) 54 2e-05
(Q9VZZ9) RecName: Full=Protein daughter of sevenless; &AE014296... 54 2e-05
AK074717_1(AK074717|pid:none) Homo sapiens cDNA FLJ90236 fis, cl... 54 2e-05
X97447_1(X97447|pid:none) D.melanogaster mRNA for PH domain prot... 54 2e-05
AK173337_1(AK173337|pid:none) Mus musculus premature mRNA for mK... 53 2e-05
(P79114) RecName: Full=Myosin-X; AltName: Full=Unconventional my... 53 2e-05
CP000592_118(CP000592|pid:none) Ostreococcus lucimarinus CCE9901... 53 3e-05
BC093150_1(BC093150|pid:none) Danio rerio dual adaptor of phosph... 53 3e-05
(P38041) RecName: Full=Protein BOB1; AltName: Full=BEM1-binding ... 53 3e-05
AK292646_1(AK292646|pid:none) Homo sapiens cDNA FLJ78632 complet... 52 4e-05
BT045566_1(BT045566|pid:none) Salmo salar clone ssal-rgf-525-017... 52 4e-05
(Q2KI41) RecName: Full=Cytohesin-2; AltName: Full=PH, SEC7 and c... 52 4e-05
CU928174_160(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 52 4e-05
AB209335_1(AB209335|pid:none) Homo sapiens mRNA for Connector en... 52 4e-05
AK222817_1(AK222817|pid:none) Homo sapiens mRNA for connector en... 52 4e-05
BC171425_1(BC171425|pid:none) Danio rerio zgc:153733, mRNA (cDNA... 52 5e-05
CR382295_2(CR382295|pid:none) Zebrafish DNA sequence from clone ... 52 5e-05
BX005083_7(BX005083|pid:none) Zebrafish DNA sequence from clone ... 52 5e-05
BC103524_1(BC103524|pid:none) Mus musculus growth factor recepto... 52 7e-05
AC116960_51(AC116960|pid:none) Dictyostelium discoideum chromoso... 52 7e-05
BC103525_1(BC103525|pid:none) Mus musculus growth factor recepto... 52 7e-05
BC103527_1(BC103527|pid:none) Mus musculus growth factor recepto... 52 7e-05
AK295630_1(AK295630|pid:none) Homo sapiens cDNA FLJ58530 complet... 52 7e-05
CR847826_1(CR847826|pid:none) Zebrafish DNA sequence from clone ... 52 7e-05
AF104244_1(AF104244|pid:none) Mus musculus PH domain containing ... 52 7e-05
DQ829778_1(DQ829778|pid:none) Branchiostoma belcheri tsingtaunes... 51 9e-05
AF277804_1(AF277804|pid:none) Dictyostelium discoideum PakC mRNA... 51 9e-05
AK046097_1(AK046097|pid:none) Mus musculus adult male corpora qu... 51 9e-05
(Q9UQC2) RecName: Full=GRB2-associated-binding protein 2; AltNam... 51 1e-04
BX248111_6(BX248111|pid:none) Zebrafish DNA sequence from clone ... 51 1e-04
BC122736_1(BC122736|pid:none) Bos taurus pleckstrin homology dom... 51 1e-04
AK297391_1(AK297391|pid:none) Homo sapiens cDNA FLJ59285 partial... 50 2e-04
(Q9HAU0) RecName: Full=Pleckstrin homology domain-containing fam... 50 2e-04
AK295151_1(AK295151|pid:none) Homo sapiens cDNA FLJ61590 partial... 50 2e-04
AK296277_1(AK296277|pid:none) Homo sapiens cDNA FLJ59284 partial... 50 2e-04
AK294739_1(AK294739|pid:none) Homo sapiens cDNA FLJ59321 complet... 50 2e-04
AB051473_1(AB051473|pid:none) Homo sapiens mRNA for KIAA1686 pro... 50 2e-04
BC070174_1(BC070174|pid:none) Homo sapiens pleckstrin homology d... 50 2e-04
AK129423_1(AK129423|pid:none) Mus musculus mRNA for mKIAA1686 pr... 50 2e-04
BC155854_1(BC155854|pid:none) Danio rerio si:ch211-239h19.1, mRN... 50 2e-04
AL627314_7(AL627314|pid:none) Mouse DNA sequence from clone RP23... 50 2e-04
BC167582_1(BC167582|pid:none) Xenopus tropicalis hypothetical pr... 50 2e-04
BC065587_1(BC065587|pid:none) Danio rerio connector enhancer of ... 50 2e-04
BX088564_2(BX088564|pid:none) Zebrafish DNA sequence from clone ... 50 2e-04
(P39969) RecName: Full=Protein BOI2; AltName: Full=Protein BEB1;... 50 3e-04
BX001030_7(BX001030|pid:none) Zebrafish DNA sequence from clone ... 50 3e-04
AK169897_1(AK169897|pid:none) Mus musculus NOD-derived CD11c +ve... 50 3e-04
BC061706_1(BC061706|pid:none) Danio rerio pleckstrin, mRNA (cDNA... 50 3e-04
AB011143_1(AB011143|pid:none) Homo sapiens mRNA for KIAA0571 pro... 50 3e-04
BC049429_1(BC049429|pid:none) Danio rerio GRB2-associated bindin... 50 3e-04
D38310_1(D38310|pid:none) Yeast BOI2 gene for Boi2p. 50 3e-04
AK137444_1(AK137444|pid:none) Mus musculus adult male bone cDNA,... 50 3e-04
BC099788_1(BC099788|pid:none) Rattus norvegicus connector enhanc... 49 3e-04
CP001330_53(CP001330|pid:none) Micromonas sp. RCC299 chromosome ... 49 3e-04
AF302149_1(AF302149|pid:none) Gallus gallus tandem PH domain-con... 49 3e-04
(Q8K1N2) RecName: Full=Pleckstrin homology-like domain family B ... 49 3e-04
BC167382_1(BC167382|pid:none) Xenopus tropicalis hypothetical pr... 49 3e-04
(Q55GV3) RecName: Full=Serine/threonine-protein kinase pakC; ... 49 3e-04
BC050915_1(BC050915|pid:none) Mus musculus pleckstrin homology-l... 49 3e-04
BC168698_1(BC168698|pid:none) Rattus norvegicus similar to SET b... 49 4e-04
AB209407_1(AB209407|pid:none) Homo sapiens mRNA for pleckstrin h... 49 4e-04
AL833135_1(AL833135|pid:none) Homo sapiens mRNA; cDNA DKFZp313N0... 49 4e-04
BC015069_1(BC015069|pid:none) Mus musculus SET binding factor 2,... 49 4e-04
BX664700_3(BX664700|pid:none) Human DNA sequence from clone WI2-... 49 4e-04
AF286160_1(AF286160|pid:none) Homo sapiens Tandem PH Domain Cont... 49 4e-04
AK042324_1(AK042324|pid:none) Mus musculus 3 days neonate thymus... 49 4e-04
CR749654_1(CR749654|pid:none) Homo sapiens mRNA; cDNA DKFZp686J0... 49 4e-04
(Q86SQ0) RecName: Full=Pleckstrin homology-like domain family B ... 49 4e-04
BC031000_1(BC031000|pid:none) Homo sapiens pleckstrin homology-l... 49 4e-04
BC128752_1(BC128752|pid:none) Rattus norvegicus pleckstrin homol... 49 4e-04
BT050178_1(BT050178|pid:none) Salmo salar clone ssal-eve-519-310... 49 6e-04
CR382130_307(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 48 8e-04
BC076776_1(BC076776|pid:none) Xenopus laevis pleckstrin homology... 48 8e-04
CR860022_1(CR860022|pid:none) Pongo abelii mRNA; cDNA DKFZp459M1... 48 8e-04
AK290396_1(AK290396|pid:none) Homo sapiens cDNA FLJ78435 complet... 48 0.001
AL023828_27(AL023828|pid:none) Caenorhabditis elegans YAC Y17G7B... 48 0.001
D29642_1(D29642|pid:none) Homo sapiens KIAA0053 mRNA, partial cds. 48 0.001
BX322570_1(BX322570|pid:none) Zebrafish DNA sequence from clone ... 48 0.001
AB383728_1(AB383728|pid:none) Synthetic construct DNA, clone: pF... 48 0.001
(Q3ZBA3) RecName: Full=Pleckstrin homology domain-containing fam... 48 0.001
AL023828_28(AL023828|pid:none) Caenorhabditis elegans YAC Y17G7B... 48 0.001
T26508(T26508)hypothetical protein Y17G7B.15 - Caenorhabditis el... 48 0.001
AK298669_1(AK298669|pid:none) Homo sapiens cDNA FLJ61332 complet... 48 0.001
AK314660_1(AK314660|pid:none) Homo sapiens cDNA, FLJ95507, highl... 48 0.001
AK291842_1(AK291842|pid:none) Homo sapiens cDNA FLJ75843 complet... 48 0.001
AK303591_1(AK303591|pid:none) Homo sapiens cDNA FLJ59112 complet... 48 0.001
CR749312_1(CR749312|pid:none) Homo sapiens mRNA; cDNA DKFZp779B2... 47 0.001
BC043389_1(BC043389|pid:none) Homo sapiens SET binding factor 2,... 47 0.001
AK123621_1(AK123621|pid:none) Homo sapiens cDNA FLJ41627 fis, cl... 47 0.001
BC101466_1(BC101466|pid:none) Homo sapiens SET binding factor 2,... 47 0.001
BX538184_1(BX538184|pid:none) Homo sapiens mRNA; cDNA DKFZp686G2... 47 0.001
BC063656_1(BC063656|pid:none) Homo sapiens SET binding factor 2,... 47 0.001
BC053867_1(BC053867|pid:none) Homo sapiens SET binding factor 2,... 47 0.001
AB384067_1(AB384067|pid:none) Synthetic construct DNA, clone: pF... 47 0.001
(Q9Y2H5) RecName: Full=Pleckstrin homology domain-containing fam... 47 0.001
AM910993_92(AM910993|pid:none) Plasmodium knowlesi strain H chro... 47 0.001
AB020709_1(AB020709|pid:none) Homo sapiens mRNA for KIAA0902 pro... 47 0.002
AF102854_1(AF102854|pid:none) Rattus norvegicus membrane-associa... 47 0.002
CR382125_907(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 47 0.002
(Q8WXI2) RecName: Full=Connector enhancer of kinase suppressor o... 47 0.002
CR858155_1(CR858155|pid:none) Pongo abelii mRNA; cDNA DKFZp469G0... 47 0.002
FJ172672_1(FJ172672|pid:none) Marsupenaeus japonicus centaurin-a... 47 0.002
CR860003_1(CR860003|pid:none) Pongo abelii mRNA; cDNA DKFZp459B1... 47 0.002
AK294728_1(AK294728|pid:none) Homo sapiens cDNA FLJ61239 complet... 47 0.002
AF418270_1(AF418270|pid:none) Homo sapiens connector enhancer of... 47 0.002
BC077609_1(BC077609|pid:none) Xenopus laevis hypothetical protei... 47 0.002
AP007166_215(AP007166|pid:none) Aspergillus oryzae RIB40 genomic... 47 0.002
BC071599_1(BC071599|pid:none) Homo sapiens pleckstrin homology d... 47 0.002
AB385210_1(AB385210|pid:none) Synthetic construct DNA, clone: pF... 47 0.002
BC077980_1(BC077980|pid:none) Xenopus laevis hypothetical protei... 47 0.002
AK122399_1(AK122399|pid:none) Mus musculus mRNA for mKIAA0902 pr... 47 0.002
BC059321_1(BC059321|pid:none) Xenopus laevis hypothetical protei... 47 0.002
BC161500_1(BC161500|pid:none) Xenopus tropicalis connector enhan... 47 0.002
CU104724_2(CU104724|pid:none) Zebrafish DNA sequence from clone ... 47 0.002
AC115612_46(AC115612|pid:none) Dictyostelium discoideum chromoso... 47 0.002
AM920433_388(AM920433|pid:none) Penicillium chrysogenum Wisconsi... 47 0.002
AK126283_1(AK126283|pid:none) Homo sapiens cDNA FLJ44298 fis, cl... 47 0.002
(Q8WWW8) RecName: Full=GRB2-associated-binding protein 3; AltNam... 47 0.002
BC056915_1(BC056915|pid:none) Homo sapiens SET binding factor 1,... 46 0.003
BC142056_1(BC142056|pid:none) Bos taurus pleckstrin homology-lik... 46 0.003
CR548612_294(CR548612|pid:none) Paramecium tetraurelia macronucl... 46 0.003
AB177859_1(AB177859|pid:none) Homo sapiens mRNA for KIAA0638 spl... 46 0.004
Z94160_3(Z94160|pid:none) Human DNA sequence from clone RP1-63G5... 46 0.004
AJ236896_1(AJ236896|pid:none) Caenorhabditis elegans mRNA for GR... 46 0.004
(P34512) RecName: Full=GTP exchange factor for ARFs 1; &L15314_... 46 0.004
U93181_1(U93181|pid:none) Homo sapiens nuclear dual-specificity ... 46 0.004
AL096767_7(AL096767|pid:none) Human DNA sequence from clone RP4-... 46 0.004
BC013031_1(BC013031|pid:none) Homo sapiens pleckstrin homology-l... 46 0.004
BC046169_1(BC046169|pid:none) Homo sapiens SET binding factor 1,... 46 0.004
AK074070_1(AK074070|pid:none) Homo sapiens mRNA for FLJ00141 pro... 46 0.004
BC144874_1(BC144874|pid:none) Mus musculus ArfGAP with dual PH d... 46 0.004
AK074918_1(AK074918|pid:none) Homo sapiens cDNA FLJ90437 fis, cl... 46 0.004
S37032(S37032;S43437) gene LL5 protein - rat &X74226_1(X74226|p... 45 0.005
AF093637_1(AF093637|pid:none) Drosophila melanogaster SET domain... 45 0.005
AK129485_1(AK129485|pid:none) Mus musculus mRNA for mKIAA3020 pr... 45 0.005
AE014297_1419(AE014297|pid:none) Drosophila melanogaster chromos... 45 0.005
(Q6PDH0) RecName: Full=Pleckstrin homology-like domain family B ... 45 0.005
AE014297_1418(AE014297|pid:none) Drosophila melanogaster chromos... 45 0.005
AK052352_1(AK052352|pid:none) Mus musculus 13 days embryo heart ... 45 0.005
BC098209_1(BC098209|pid:none) Mus musculus SET binding factor 1,... 45 0.005
BC157935_1(BC157935|pid:none) Mus musculus SET binding factor 1,... 45 0.005
AK076039_1(AK076039|pid:none) Mus musculus 10 days embryo whole ... 45 0.005
BC158013_1(BC158013|pid:none) Mus musculus SET binding factor 1,... 45 0.005
AM270139_43(AM270139|pid:none) Aspergillus niger contig An07c022... 45 0.005
(Q6ZPE2) RecName: Full=Myotubularin-related protein 5; AltName: ... 45 0.005
(Q63312) RecName: Full=Pleckstrin homology-like domain family B ... 45 0.005
BT072585_1(BT072585|pid:none) Salmo salar clone ssal-rgf-531-222... 45 0.006
BC120339_1(BC120339|pid:none) Bos taurus pleckstrin homology dom... 45 0.006
AL670542_8(AL670542|pid:none) Neurospora crassa DNA linkage grou... 45 0.006
AK146866_1(AK146866|pid:none) Mus musculus 17 days embryo stomac... 45 0.006
(B4R0A5) RecName: Full=Diacylglycerol kinase eta; Short... 45 0.006
BC088682_1(BC088682|pid:none) Xenopus laevis hypothetical LOC496... 45 0.006
(B4I4Y1) RecName: Full=Diacylglycerol kinase eta; Short... 45 0.006
AL592114_6(AL592114|pid:none) Human DNA sequence from clone RP11... 45 0.006
(A8JQ65) RecName: Full=Diacylglycerol kinase eta; Short... 45 0.006
FN392319_146(FN392319|pid:none) Pichia pastoris GS115 chromosome... 45 0.006
BT044657_1(BT044657|pid:none) Salmo salar clone ssal-rgf-002-075... 45 0.006
BC084587_1(BC084587|pid:none) Mus musculus pleckstrin homology d... 45 0.006
(Q7SYB5) RecName: Full=Differentially expressed in FDCP 6 homolo... 45 0.006
(A6QLU3) RecName: Full=GRB2-associated-binding protein 1; AltNam... 45 0.008
AE014297_1815(AE014297|pid:none) Drosophila melanogaster chromos... 45 0.008
BC135618_1(BC135618|pid:none) Xenopus tropicalis hypothetical pr... 45 0.008
BC161647_1(BC161647|pid:none) Xenopus tropicalis hypothetical pr... 45 0.008
CR392038_2(CR392038|pid:none) Zebrafish DNA sequence from clone ... 45 0.008
AE014297_1813(AE014297|pid:none) Drosophila melanogaster chromos... 45 0.008
BC166132_1(BC166132|pid:none) Xenopus tropicalis cDNA clone IMAG... 45 0.008
AL929161_1(AL929161|pid:none) Zebrafish DNA sequence from clone ... 45 0.008
BC141240_1(BC141240|pid:none) Mus musculus growth factor recepto... 45 0.008
AY057988_1(AY057988|pid:none) Mus musculus GAB3 mRNA, complete c... 45 0.008
(Q8BSM5) RecName: Full=GRB2-associated-binding protein 3; AltNam... 45 0.008
BC110774_1(BC110774|pid:none) Xenopus laevis hypothetical protei... 45 0.008
EF214918_1(EF214918|pid:none) Callithrix jacchus clone D16-48.4_... 45 0.008
(Q13480) RecName: Full=GRB2-associated-binding protein 1; AltNam... 45 0.008
AY616187_1(AY616187|pid:none) Ustilago maydis p21-activated kina... 44 0.011
DQ848969_1(DQ848969|pid:none) Scophthalmus maximus clone sba1473... 44 0.011
AB208967_1(AB208967|pid:none) Homo sapiens mRNA for PLEK protein... 44 0.011
AK289546_1(AK289546|pid:none) Homo sapiens cDNA FLJ77448 complet... 44 0.011
(Q64398) RecName: Full=Diacylglycerol kinase eta; Short... 44 0.011
(Q86XP1) RecName: Full=Diacylglycerol kinase eta; Short... 44 0.011
AK173074_1(AK173074|pid:none) Mus musculus mRNA for mKIAA0969 pr... 44 0.011
AY241695_1(AY241695|pid:none) Mus musculus IRF4-binding protein ... 44 0.011
AB078967_1(AB078967|pid:none) Homo sapiens DGKH-1 mRNA for diacy... 44 0.011
BC142337_1(BC142337|pid:none) Bos taurus differentially expresse... 44 0.014
BC017504_1(BC017504|pid:none) Homo sapiens cDNA clone MGC:23250 ... 44 0.014
AY893971_1(AY893971|pid:none) Synthetic construct Homo sapiens c... 44 0.014
AK296068_1(AK296068|pid:none) Homo sapiens cDNA FLJ51480 complet... 44 0.014
BC011143_1(BC011143|pid:none) Homo sapiens SET binding factor 2,... 44 0.014
DQ893586_1(DQ893586|pid:none) Synthetic construct clone IMAGE:10... 44 0.014
AK297056_1(AK297056|pid:none) Homo sapiens cDNA FLJ51694 complet... 44 0.014
AK314756_1(AK314756|pid:none) Homo sapiens cDNA, FLJ95623, highl... 44 0.014
CR940353_473(CR940353|pid:none) Theileria annulata strain Ankara... 44 0.014
AC015969_2(AC015969|pid:none) Homo sapiens BAC clone RP11-218N6 ... 44 0.014
AY241694_1(AY241694|pid:none) Homo sapiens IRF4-binding protein ... 44 0.014
AY891475_1(AY891475|pid:none) Synthetic construct Homo sapiens c... 44 0.014
BC115308_1(BC115308|pid:none) Danio rerio si:dkey-8l13.4, mRNA (... 44 0.018
AX405898_1(AX405898|pid:none) Sequence 313 from Patent WO0222660. 44 0.018
BX005395_4(BX005395|pid:none) Zebrafish DNA sequence from clone ... 44 0.018
AB365481_1(AB365481|pid:none) Colletotrichum lagenarium ClaATG26... 44 0.018
CR382138_889(CR382138|pid:none) Debaryomyces hansenii strain CBS... 44 0.018
BC157669_1(BC157669|pid:none) Xenopus tropicalis hypothetical pr... 43 0.024
AK222401_1(AK222401|pid:none) Ciona intestinalis mRNA for zinc f... 43 0.024
AL844509_599(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 43 0.024
(P22059) RecName: Full=Oxysterol-binding protein 1; &A34581(A34... 43 0.024
AK122336_1(AK122336|pid:none) Mus musculus mRNA for mKIAA0638 pr... 43 0.024
(Q3B7Z2) RecName: Full=Oxysterol-binding protein 1; 43 0.024
(Q6DFG0) RecName: Full=Rho GTPase-activating protein 21-A; AltNa... 43 0.032
EF564004_1(EF564004|pid:none) Phytophthora ramorum cellulose syn... 43 0.032
AB051451_1(AB051451|pid:none) Homo sapiens mRNA for KIAA1664 pro... 43 0.032
AB384622_1(AB384622|pid:none) Synthetic construct DNA, clone: pF... 43 0.032
BC170466_1(BC170466|pid:none) Xenopus laevis Rho GTPase activati... 43 0.032
AC104685_1(AC104685|pid:none) Homo sapiens BAC clone RP11-58H15 ... 43 0.032
AF288741_1(AF288741|pid:none) Homo sapiens oxysterol binding pro... 43 0.032
AF143848_1(AF143848|pid:none) Gallus gallus pleckstrin mRNA, com... 43 0.032
CR860450_1(CR860450|pid:none) Pongo abelii mRNA; cDNA DKFZp459L0... 43 0.032
EF563996_1(EF563996|pid:none) Phytophthora infestans cellulose s... 43 0.032
U88368_1(U88368|pid:none) Sus scrofa inositol(1,3,4,5)tetrakisph... 42 0.041
AJ310446_1(AJ310446|pid:none) Oncorhynchus mykiss mRNA for Pleck... 42 0.041
BC154100_1(BC154100|pid:none) Xenopus tropicalis hypothetical pr... 42 0.041
(Q6Q308) RecName: Full=Pleckstrin; &AY563035_1(AY563035|pid:none) 42 0.041
(Q552C1) RecName: Full=Probable serine/threonine-protein kinase ... 42 0.041
AK096859_1(AK096859|pid:none) Homo sapiens cDNA FLJ39540 fis, cl... 42 0.054
(Q9UH65) RecName: Full=Switch-associated protein 70; Sh... 42 0.054
(Q1ZXH8) RecName: Full=Guanine exchange factor for Rac 30; 42 0.054
S00755(S00755;A45762) pleckstrin - human &X07743_1(X07743|pid:n... 42 0.054
BX470224_4(BX470224|pid:none) Zebrafish DNA sequence from clone ... 42 0.054
AK172990_1(AK172990|pid:none) Mus musculus mRNA for mKIAA0640 pr... 42 0.054
AK304104_1(AK304104|pid:none) Homo sapiens cDNA FLJ61538 complet... 42 0.054
AB383933_1(AB383933|pid:none) Synthetic construct DNA, clone: pF... 42 0.054
AP007166_283(AP007166|pid:none) Aspergillus oryzae RIB40 genomic... 42 0.070
AC112700_1(AC112700|pid:none) Homo sapiens BAC clone RP11-1377I1... 42 0.070
BC124514_1(BC124514|pid:none) Danio rerio zgc:154018, mRNA (cDNA... 42 0.070
(Q9JHK5) RecName: Full=Pleckstrin; &AF073294_1(AF073294|pid:non... 42 0.070
BC076512_1(BC076512|pid:none) Danio rerio zgc:92360, mRNA (cDNA ... 42 0.070
AF303745_1(AF303745|pid:none) Mus musculus pleckstrin 1 small is... 42 0.070
BC146071_1(BC146071|pid:none) Bos taurus SWAP-70 protein, mRNA (... 42 0.070
EF043946_1(EF043946|pid:none) Synthetic construct clone ATCC 106... 42 0.070
(Q0CKU4) RecName: Full=Sterol 3-beta-glucosyltransferase; ... 42 0.070
AM920436_727(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 42 0.070
AK075810_1(AK075810|pid:none) Mus musculus 10 day old male pancr... 42 0.070
EU386160_1(EU386160|pid:none) Rhodosporidium toruloides p21-acti... 41 0.092
CQ855866_1(CQ855866|pid:none) Sequence 25 from Patent WO20040700... 41 0.092
AF232933_1(AF232933|pid:none) Bos taurus Goodpasture antigen-bin... 41 0.092
AK038061_1(AK038061|pid:none) Mus musculus 16 days neonate thymu... 41 0.092
U51013_1(U51013|pid:none) Rattus norvegicus centaurin alpha mRNA... 41 0.092
AK103870_1(AK103870|pid:none) Oryza sativa Japonica Group cDNA c... 41 0.092
AK030305_1(AK030305|pid:none) Mus musculus 11 days pregnant adul... 41 0.092
AF123047_1(AF123047|pid:none) Rattus norvegicus centaurin/PIP3-b... 41 0.092
AY323814_1(AY323814|pid:none) Cricetulus griseus lipid-transfer ... 41 0.092
CQ855936_1(CQ855936|pid:none) Sequence 95 from Patent WO20040700... 41 0.092
AK290517_1(AK290517|pid:none) Homo sapiens cDNA FLJ77789 complet... 41 0.092
AK047100_1(AK047100|pid:none) Mus musculus 10 days neonate cereb... 41 0.092
CQ855852_1(CQ855852|pid:none) Sequence 11 from Patent WO20040700... 41 0.092
AK080958_1(AK080958|pid:none) Mus musculus 4 days neonate male a... 41 0.092
CQ855854_1(CQ855854|pid:none) Sequence 13 from Patent WO20040700... 41 0.092
(Q6VVX2) RecName: Full=Collagen type IV alpha-3-binding protein;... 41 0.092
AK163624_1(AK163624|pid:none) Mus musculus 4 days neonate male a... 41 0.092
CQ855938_1(CQ855938|pid:none) Sequence 97 from Patent WO20040700... 41 0.092
EU956627_1(EU956627|pid:none) Zea mays clone 1568433 rho GTPase ... 41 0.092
CQ855860_1(CQ855860|pid:none) Sequence 19 from Patent WO20040700... 41 0.092
(Q5R6M6) RecName: Full=Collagen type IV alpha-3-binding protein;... 41 0.092
AF232930_1(AF232930|pid:none) Homo sapiens Goodpasture antigen-b... 41 0.092
CQ855864_1(CQ855864|pid:none) Sequence 23 from Patent WO20040700... 41 0.092
CQ855934_1(CQ855934|pid:none) Sequence 93 from Patent WO20040700... 41 0.092
AK300859_1(AK300859|pid:none) Homo sapiens cDNA FLJ54168 complet... 41 0.092
(Q9EQG9) RecName: Full=Collagen type IV alpha-3-binding protein;... 41 0.092
(Q9Y5P4) RecName: Full=Collagen type IV alpha-3-binding protein;... 41 0.092
AP003833_8(AP003833|pid:none) Oryza sativa Japonica Group genomi... 41 0.092
AK076768_1(AK076768|pid:none) Mus musculus adult male testis cDN... 41 0.092
AF232934_1(AF232934|pid:none) Mus musculus Goodpasture antigen-b... 41 0.092
CQ855850_1(CQ855850|pid:none) Sequence 9 from Patent WO2004070025. 41 0.092
(O75689) RecName: Full=Arf-GAP with dual PH domain-containing pr... 41 0.092
AK092471_1(AK092471|pid:none) Homo sapiens cDNA FLJ35152 fis, cl... 41 0.092
CQ855846_1(CQ855846|pid:none) Sequence 5 from Patent WO2004070025. 41 0.092
BT046464_1(BT046464|pid:none) Salmo salar clone ssal-evf-515-382... 41 0.12
D73409_1(D73409|pid:none) Homo sapiens mRNA for diacylglycerol k... 41 0.12
(Q8WWN9) RecName: Full=Interactor protein for cytohesin exchange... 41 0.12
BC167450_1(BC167450|pid:none) Danio rerio pleckstrin 2, mRNA (cD... 41 0.12
BC149377_1(BC149377|pid:none) Bos taurus diacylglycerol kinase, ... 41 0.12
AB007863_1(AB007863|pid:none) Homo sapiens KIAA0403 mRNA, partia... 41 0.12
BC077879_1(BC077879|pid:none) Xenopus laevis MGC80649 protein, m... 41 0.12
(Q6P3Q6) RecName: Full=Collagen type IV alpha-3-binding protein;... 41 0.12
(Q9WV52) RecName: Full=Pleckstrin-2; &AF157600_1(AF157600|pid:n... 41 0.12
BC043327_1(BC043327|pid:none) Mus musculus FERM, RhoGEF (Arhgef)... 40 0.16
BC030329_1(BC030329|pid:none) Mus musculus FERM, RhoGEF (Arhgef)... 40 0.16
BC004009_1(BC004009|pid:none) Mus musculus FERM, RhoGEF (Arhgef)... 40 0.16
AL773540_3(AL773540|pid:none) Mouse DNA sequence from clone RP23... 40 0.16
AL773540_2(AL773540|pid:none) Mouse DNA sequence from clone RP23... 40 0.16
BC150741_1(BC150741|pid:none) Mus musculus Rho GTPase activating... 40 0.16
AK075159_1(AK075159|pid:none) Homo sapiens cDNA FLJ90678 fis, cl... 40 0.16
BC027077_1(BC027077|pid:none) Mus musculus FERM, RhoGEF (Arhgef)... 40 0.16
AK034903_1(AK034903|pid:none) Mus musculus 12 days embryo embryo... 40 0.16
BC008056_1(BC008056|pid:none) Homo sapiens pleckstrin 2, mRNA (c... 40 0.16
AK122508_1(AK122508|pid:none) Mus musculus premature mRNA for mK... 40 0.16
(Q6DFV3) RecName: Full=Rho GTPase-activating protein 21; AltName... 40 0.16
(Q7S1I0) RecName: Full=Sterol 3-beta-glucosyltransferase; ... 40 0.16
EF563994_1(EF563994|pid:none) Phytophthora infestans cellulose s... 40 0.20
AK092287_1(AK092287|pid:none) Homo sapiens cDNA FLJ34968 fis, cl... 40 0.20
(Q9ERE6) RecName: Full=Myosin phosphatase Rho-interacting protei... 40 0.20
(Q8INB9) RecName: Full=RAC serine/threonine-protein kinase; ... 40 0.20
AK154807_1(AK154807|pid:none) Mus musculus NOD-derived CD11c +ve... 40 0.20
BC099035_1(BC099035|pid:none) Xenopus laevis hypothetical protei... 40 0.20
BT043719_1(BT043719|pid:none) Salmo salar clone HM5_3014 v-akt m... 40 0.20
A59438(A59438;B59438) KIAA1424 protein [imported] - human &AB03... 40 0.20
(Q9Y4F1) RecName: Full=FERM, RhoGEF and pleckstrin domain-contai... 40 0.20
BC098911_1(BC098911|pid:none) Rattus norvegicus myosin phosphata... 40 0.20
AC116982_55(AC116982|pid:none) Dictyostelium discoideum chromoso... 40 0.20
AK171089_1(AK171089|pid:none) Mus musculus NOD-derived CD11c +ve... 40 0.20
AC116924_24(AC116924|pid:none) Dictyostelium discoideum chromoso... 40 0.20
AK155630_1(AK155630|pid:none) Mus musculus B6-derived CD11 +ve d... 40 0.20
AK158296_1(AK158296|pid:none) Mus musculus adult inner ear cDNA,... 40 0.20
(Q6WCQ1) RecName: Full=Myosin phosphatase Rho-interacting protei... 40 0.20
AK295649_1(AK295649|pid:none) Homo sapiens cDNA FLJ54686 complet... 40 0.20
(Q5T5U3) RecName: Full=Rho GTPase-activating protein 21; AltName... 40 0.20
AM393217_1(AM393217|pid:none) Synthetic construct Homo sapiens c... 40 0.20
AK044512_1(AK044512|pid:none) Mus musculus adult retina cDNA, RI... 40 0.20
BX537570_1(BX537570|pid:none) Homo sapiens mRNA; cDNA DKFZp686D2... 40 0.20
AL596204_6(AL596204|pid:none) Mouse DNA sequence from clone RP23... 40 0.20
AB385176_1(AB385176|pid:none) Synthetic construct DNA, clone: pF... 40 0.20
AE014297_2229(AE014297|pid:none) Drosophila melanogaster chromos... 40 0.20
(Q5SWZ7) RecName: Full=Myosin phosphatase Rho-interacting protei... 40 0.20
AL596204_5(AL596204|pid:none) Mouse DNA sequence from clone RP23... 40 0.20
AL596204_8(AL596204|pid:none) Mouse DNA sequence from clone RP23... 40 0.20
EF564002_1(EF564002|pid:none) Phytophthora ramorum cellulose syn... 40 0.20
AL596204_4(AL596204|pid:none) Mouse DNA sequence from clone RP23... 40 0.20
AB384499_1(AB384499|pid:none) Synthetic construct DNA, clone: pF... 40 0.27
EF043965_1(EF043965|pid:none) Synthetic construct clone ATCC 106... 40 0.27
BC097996_1(BC097996|pid:none) Rattus norvegicus cDNA clone IMAGE... 40 0.27
AL117202_18(AL117202|pid:none) Caenorhabditis elegans YAC Y47D3A... 40 0.27
CU633870_30(CU633870|pid:none) Podospora anserina genomic DNA ch... 40 0.27
BC029007_1(BC029007|pid:none) Mus musculus RIKEN cDNA 2610034M16... 40 0.27
AK220339_1(AK220339|pid:none) Mus musculus mRNA for mKIAA0403 pr... 40 0.27
(Q5QNQ6) RecName: Full=Oxysterol-binding protein 2; &AL691413_9... 40 0.27
AX022162_1(AX022162|pid:none) Sequence 1 from Patent EP0953042. 40 0.27
AX027844_1(AX027844|pid:none) Sequence 1 from Patent WO0040718. 39 0.35
AM920429_120(AM920429|pid:none) Penicillium chrysogenum Wisconsi... 39 0.35
BX088564_1(BX088564|pid:none) Zebrafish DNA sequence from clone ... 39 0.35
AK220153_1(AK220153|pid:none) Mus musculus mRNA for mFLJ00274 pr... 39 0.35
(Q28CB1) RecName: Full=TBC1 domain family member 2B; &BC121891_... 39 0.35
(Q80UZ0) RecName: Full=FYVE, RhoGEF and PH domain-containing pro... 39 0.35
AB385192_1(AB385192|pid:none) Synthetic construct DNA, clone: pF... 39 0.35
AK290135_1(AK290135|pid:none) Homo sapiens cDNA FLJ77032 partial... 39 0.35
(Q5KSL6) RecName: Full=Diacylglycerol kinase kappa; Sho... 39 0.35
BC014510_1(BC014510|pid:none) Homo sapiens pleckstrin homology-l... 39 0.35
BC042732_1(BC042732|pid:none) Mus musculus FYVE, RhoGEF and PH d... 39 0.35
BC040275_1(BC040275|pid:none) Homo sapiens Ras protein-specific ... 39 0.35
BC153230_1(BC153230|pid:none) Bos taurus myosin phosphatase-Rho ... 39 0.35
(Q9NGQ2) RecName: Full=Kinesin-related protein 1; AltName: Full=... 39 0.46
(Q9P7Y8) RecName: Full=Septin ring organizing protein mid2; &AL... 39 0.46
AP007171_427(AP007171|pid:none) Aspergillus oryzae RIB40 genomic... 39 0.46
AC117072_36(AC117072|pid:none) Dictyostelium discoideum chromoso... 39 0.46
EU386161_1(EU386161|pid:none) Rhodosporidium toruloides p21-acti... 39 0.46
BC084161_1(BC084161|pid:none) Xenopus laevis hypothetical LOC495... 39 0.46
AE017350_249(AE017350|pid:none) Cryptococcus neoformans var. neo... 39 0.46
Y13951_1(Y13951|pid:none) Drosophila melanogaster cDNA encoding ... 39 0.46
FN357440_27(FN357440|pid:none) Schistosoma mansoni genome sequen... 39 0.46
(A7ERM5) RecName: Full=Sterol 3-beta-glucosyltransferase; ... 39 0.59
(Q6IP76) RecName: Full=RAC-beta serine/threonine-protein kinase ... 39 0.59
AY056465_1(AY056465|pid:none) Danio rerio protein kinase AKT-2 m... 39 0.59
(Q80VL0) RecName: Full=Interactor protein for cytohesin exchange... 39 0.59
BC103717_1(BC103717|pid:none) Xenopus tropicalis TRIO and F-acti... 39 0.59
BC160537_1(BC160537|pid:none) Xenopus tropicalis TRIO and F-acti... 39 0.59
BX004781_1(BX004781|pid:none) Zebrafish DNA sequence from clone ... 39 0.59
AE014134_2592(AE014134|pid:none) Drosophila melanogaster chromos... 38 0.78
AK316947_1(AK316947|pid:none) Arabidopsis thaliana AT5G19390 mRN... 38 0.78
AK124904_1(AK124904|pid:none) Homo sapiens cDNA FLJ42914 fis, cl... 38 0.78
U55232_1(U55232|pid:none) Mus musculus imprinted RLGS locus Irgl... 38 0.78
BC075627_1(BC075627|pid:none) Mus musculus diacylglycerol kinase... 38 0.78
BC064211_1(BC064211|pid:none) Xenopus tropicalis Centaurin-alpha... 38 0.78
AX405929_1(AX405929|pid:none) Sequence 344 from Patent WO0222660. 38 0.78
AM270414_17(AM270414|pid:none) Aspergillus niger contig An18c022... 38 0.78
AK128492_1(AK128492|pid:none) Homo sapiens cDNA FLJ46642 fis, cl... 38 0.78
AE014134_2593(AE014134|pid:none) Drosophila melanogaster chromos... 38 0.78
AF318370_1(AF318370|pid:none) Homo sapiens pp8997 mRNA, complete... 38 0.78
AK002045_1(AK002045|pid:none) Homo sapiens cDNA FLJ11183 fis, cl... 38 0.78
AB449882_1(AB449882|pid:none) Homo sapiens TBC1D2A mRNA for TBC1... 38 0.78
Z26242_1(Z26242|pid:none) D.melanogaster mRNA for Dakt1 serine/t... 38 0.78
AY026527_1(AY026527|pid:none) Homo sapiens prostate antigen PARI... 38 0.78
(Q27421) RecName: Full=Protein outspread; &AE014134_2591(AE0141... 38 0.78
FN357545_13(FN357545|pid:none) Schistosoma mansoni genome sequen... 38 0.78
FN357545_12(FN357545|pid:none) Schistosoma mansoni genome sequen... 38 0.78
FN313905_1(FN313905|pid:none) Schistosoma japonicum isolate Anhu... 38 1.0
BX640820_1(BX640820|pid:none) Homo sapiens mRNA; cDNA DKFZp686L2... 38 1.0
(Q91VS8) RecName: Full=FERM, RhoGEF and pleckstrin domain-contai... 38 1.0
BC073417_1(BC073417|pid:none) Xenopus laevis MGC80883 protein, m... 38 1.0
(Q6ZNL6) RecName: Full=FYVE, RhoGEF and PH domain-containing pro... 38 1.0
(P47196) RecName: Full=RAC-alpha serine/threonine-protein kinase... 38 1.0
AB007727_11(AB007727|pid:none) Arabidopsis thaliana genomic DNA,... 38 1.0
FN357293_52(FN357293|pid:none) Schistosoma mansoni genome sequen... 38 1.0
AK131290_1(AK131290|pid:none) Homo sapiens cDNA FLJ16244 fis, cl... 38 1.0
AK096856_1(AK096856|pid:none) Homo sapiens cDNA FLJ39537 fis, cl... 38 1.0
AF529243_1(AF529243|pid:none) Hydra vulgaris protein kinase B mR... 38 1.0
(A1CYS1) RecName: Full=Sterol 3-beta-glucosyltransferase; ... 37 1.3
BT031081_1(BT031081|pid:none) Drosophila melanogaster LD03231 fu... 37 1.3
AK016940_1(AK016940|pid:none) Mus musculus adult male testis cDN... 37 1.3
AE014298_2641(AE014298|pid:none) Drosophila melanogaster chromos... 37 1.3
AF165226_1(AF165226|pid:none) Lapemis hardwickii IP4/PIP3 bindin... 37 1.3
(Q01314) RecName: Full=RAC-alpha serine/threonine-protein kinase... 37 1.3
S62117(S62117;S24423;S17999;S15714;S36388) protein kinase (EC 2.... 37 1.3
AF023130_1(AF023130|pid:none) Homo sapiens Ras-GRF2 mRNA, partia... 37 1.3
EF563993_1(EF563993|pid:none) Phytophthora infestans cellulose s... 37 1.3

>AC116986_113(AC116986|pid:none) Dictyostelium discoideum chromosome 2
map 2234041-2567370 strain AX4, complete sequence.
Length = 458

Score = 441 bits (1134), Expect = e-122
Identities = 215/215 (100%), Positives = 215/215 (100%)
Frame = +3

Query: 591 DVGAIINPVKIGSWIDMSDKGGMDGGWYFPVDIPLKLAIEASDAGEPTRKLSEWAESNEV 770
DVGAIINPVKIGSWIDMSDKGGMDGGWYFPVDIPLKLAIEASDAGEPTRKLSEWAESNEV
Sbjct: 244 DVGAIINPVKIGSWIDMSDKGGMDGGWYFPVDIPLKLAIEASDAGEPTRKLSEWAESNEV 303

Query: 771 VNCYSIGRDMGAAPPRQTETRFKLPGPDFIAQLNLAVDAFKTFEFPPIPSNALEILYQSS 950
VNCYSIGRDMGAAPPRQTETRFKLPGPDFIAQLNLAVDAFKTFEFPPIPSNALEILYQSS
Sbjct: 304 VNCYSIGRDMGAAPPRQTETRFKLPGPDFIAQLNLAVDAFKTFEFPPIPSNALEILYQSS 363

Query: 951 NTLEAGGLCLSVITSSEGFVRLGLLIPKPTRDVVGQLCEIGQANRERISKFETALGGCGP 1130
NTLEAGGLCLSVITSSEGFVRLGLLIPKPTRDVVGQLCEIGQANRERISKFETALGGCGP
Sbjct: 364 NTLEAGGLCLSVITSSEGFVRLGLLIPKPTRDVVGQLCEIGQANRERISKFETALGGCGP 423

Query: 1131 AFVEFQYLQKGFGYTVYKEGFDIVFHYMVGEDQSE 1235
AFVEFQYLQKGFGYTVYKEGFDIVFHYMVGEDQSE
Sbjct: 424 AFVEFQYLQKGFGYTVYKEGFDIVFHYMVGEDQSE 458

Score = 201 bits (511), Expect = 5e-50
Identities = 100/111 (90%), Positives = 100/111 (90%)
Frame = +3

Query: 213 MSEPELKVSVSQLAPSDREGWLTKQGGSIRTWRRRWFVLKGKKLFYFKSKGDIEATGLIE 392
MSEPELKVSVSQLAPSDREGWLTKQGGSIRTWRRRWFVLKGKKLFYFKSKGDIEATGLIE
Sbjct: 1 MSEPELKVSVSQLAPSDREGWLTKQGGSIRTWRRRWFVLKGKKLFYFKSKGDIEATGLIE 60

Query: 393 LEQNSFVXXXXXXXXXXXYMFTVGTSKRVFYIFAETETDMKQWMESIKRNL 545
LEQNSFV YMFTVGTSKRVFYIFAETETDMKQWMESIKRNL
Sbjct: 61 LEQNSFVKEEKDKDKKKKYMFTVGTSKRVFYIFAETETDMKQWMESIKRNL 111

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,040,619,552
Number of extensions: 39297444
Number of successful extensions: 94648
Number of sequences better than 10.0: 606
Number of HSP's gapped: 94362
Number of HSP's successfully gapped: 625
Length of query: 470
Length of database: 1,040,966,779
Length adjustment: 132
Effective length of query: 338
Effective length of database: 618,001,159
Effective search space: 208884391742
Effective search space used: 208884391742
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.74 gvh: 0.35 alm: 0.39 top: 0.53 tms: 0.00 mit: 0.19 mip: 0.00
nuc: 0.12 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: nuclear
36.0 %: cytoplasmic
4.0 %: cytoskeletal
4.0 %: Golgi
4.0 %: plasma membrane
4.0 %: vesicles of secretory system

>> prediction for Contig-U10892-1 is nuc

VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 3
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 4
CH (FL, L) 1
CF (FL, S) 2
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0