Contig-U10863-1 |
Contig ID |
Contig-U10863-1 |
Contig update |
2002.12.18 |
Contig sequence |
|
Gap |
gap included |
Contig length |
1713 |
Chromosome number (1..6, M) |
3 |
Chromosome length |
6358359 |
Start point |
5640130 |
End point |
5638417 |
Strand (PLUS/MINUS) |
MINUS |
Number of clones |
6 |
Number of EST |
9 |
Link to clone list |
U10863 |
List of clone(s) |
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.10 |
Homology vs CSM-cDNA |
|
dna update |
2008.11.22 |
Homology vs DNA |
Query= Contig-U10863-1 (Contig-U10863-1Q) /CSM_Contig/Contig-U10863-1Q.Seq.d (1723 letters)
Database: ddbj_A 92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(AB082543) Dictyostelium discoideum forB gene for formin hom... 1263 0.0 2 (AU033761) Dictyostelium discoideum slug cDNA, clone SLB408. 1124 0.0 1 (BJ363838) Dictyostelium discoideum cDNA clone:ddc28b23, 5' ... 944 0.0 2 (BJ376492) Dictyostelium discoideum cDNA clone:ddc28b23, 3' ... 527 0.0 3 (BJ396133) Dictyostelium discoideum cDNA clone:dds41a15, 5' ... 387 0.0 3 (BJ362858) Dictyostelium discoideum cDNA clone:ddc23f23, 5' ... 377 0.0 3 (BJ396459) Dictyostelium discoideum cDNA clone:dds42b06, 5' ... 371 0.0 4 (BJ323880) Dictyostelium discoideum cDNA clone:dda12o13, 5' ... 341 0.0 4 (AU264877) Dictyostelium discoideum vegetative cDNA clone:VS... 507 0.0 3 (BJ390309) Dictyostelium discoideum cDNA clone:dds21o20, 5' ... 341 0.0 3 (BJ364206) Dictyostelium discoideum cDNA clone:ddc30a20, 5' ... 341 0.0 3 (AU053370) Dictyostelium discoideum slug cDNA, clone SLI478. 341 0.0 2 (BJ377164) Dictyostelium discoideum cDNA clone:ddc22f23, 3' ... 280 e-170 4 (BJ340348) Dictyostelium discoideum cDNA clone:dda12o13, 3' ... 280 e-149 3 (BJ376950) Dictyostelium discoideum cDNA clone:ddc30a20, 3' ... 478 e-133 2 (AU264878) Dictyostelium discoideum vegetative cDNA clone:VS... 341 e-118 3 (BJ400743) Dictyostelium discoideum cDNA clone:dds14h17, 3' ... 327 8e-85 1 (AC104211) Homo sapiens chromosome 8, clone RP11-100L22, com... 42 0.003 2 (AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 36 0.026 17 (AJ812236) Dictyostelium discoideum mRNA for diaphanous-rela... 50 0.28 1 (ED633442) GM_WBa0036O11.f GM_WBa Glycine max genomic clone ... 50 0.28 1 (CR928979) Danio rerio EST sequence, clone 234-A11-2. 50 0.28 1 (BP920662) Adiantum capillus-veneris mRNA, clone: YMU001_000... 50 0.28 1 (I89446) Sequence 33 from patent US 5721352. 44 0.51 2 (I16693) Sequence 33 from patent US 5476781. 44 0.51 2 (AR214751) Sequence 33 from patent US 6410221. 44 0.51 2 (AC079431) Mus musculus chromosome 16 clone RP23-1J12, WORKI... 38 0.59 2 (AC127287) Mus musculus BAC clone RP23-345G7 from chromosome... 38 0.60 2 (M75889) Amsacta moorei entomopoxvirus spheroidin gene, comp... 44 0.60 2 (I89423) Sequence 1 from patent US 5721352. 44 0.85 2 (M77182) Amsacta entomopoxvirus spheroidin gene, complete cd... 44 1.0 2 (I16670) Sequence 1 from patent US 5476781. 44 1.0 2 (AR214728) Sequence 1 from patent US 6410221. 44 1.0 2 (AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 48 1.1 1 (AB082542) Dictyostelium discoideum forA mRNA for formin hom... 48 1.1 1 (C91378) Dictyostelium discoideum slug cDNA, clone SSK144. 48 1.1 1 (C23670) Dictyostelium discoideum gamete cDNA, clone FCL-AB11. 48 1.1 1 (BA000037) Vibrio vulnificus YJ016 DNA, chromosome I, comple... 48 1.1 1 (AE016795) Vibrio vulnificus CMCP6 chromosome I complete seq... 48 1.1 1 (AF250284) Amsacta moorei entomopoxvirus, complete genome. 44 1.3 8 (AL691517) Human DNA sequence from clone XXyac-12DB5 on chro... 38 2.4 3 (FH460705) CHO_OF4934xk17r1.ab1 CHO_OF4 Nicotiana tabacum ge... 36 3.0 2 (BD460306) Diagnosis of Diseases Associated with Cell Cycle. 42 3.0 2 (BD452228) Diagnosis of Diseases Associated with Cell Cycle. 42 3.0 2 (AX348967) Sequence 425 from Patent WO0202807. 42 3.0 2 (AX344644) Sequence 69 from Patent WO0200927. 42 3.0 2 (AX344228) Sequence 75 from Patent WO0200926. 42 3.0 2 (AX251842) Sequence 103 from Patent WO0168911. 42 3.0 2 (AX392736) Sequence 26 from Patent WO0212526. 44 3.4 3 (AR707083) Sequence 26 from patent US 6933145. 44 3.4 3 (AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 32 3.6 16 (AC188668) Pan troglodytes BAC clone CH251-162B7 from chromo... 44 3.6 2 (BX284692) Zebrafish DNA sequence from clone CH211-282O22 in... 46 4.4 1 (AM180579) Arabidopsis cebennensis mamc gene for methylthioa... 46 4.4 1 (AC158879) Bos taurus clone CH240-18C21, *** SEQUENCING IN P... 46 4.4 1 (AC115338) Rattus norvegicus clone CH230-100B7, *** SEQUENCI... 46 4.4 1 (AC098290) Rattus norvegicus clone CH230-1K15, *** SEQUENCIN... 46 4.4 1 (AC223287) Bos taurus clone CH240-423H10, WORKING DRAFT SEQU... 46 4.4 1 (AC218709) Bos taurus clone CH240-296D21, WORKING DRAFT SEQU... 46 4.4 1 (AC180181) Strongylocentrotus purpuratus clone R3-4001J24, W... 46 4.4 1 (AC178782) Strongylocentrotus purpuratus clone R3-2A5, WORKI... 46 4.4 1 (AC167499) Bos taurus clone CH240-193L15, WORKING DRAFT SEQU... 46 4.4 1 (FH976361) CHO_OF6820xj07f1.ab1 CHO_OF6 Nicotiana tabacum ge... 46 4.4 1 (FH747267) CHO_OF5210xh19f1.ab1 CHO_OF5 Nicotiana tabacum ge... 46 4.4 1 (DH232797) Oryzias latipes Fosmid clone:GOLWFno501_o20, reve... 46 4.4 1 (DH102014) Oryzias latipes Fosmid clone:GOLWFno348_n04, forw... 46 4.4 1 (CW856685) sh2ad4-43.g_040.ab1 Whole-genome shotgun library ... 46 4.4 1 (CC919424) t021m13ba.f1 TAMBT Bos taurus genomic clone t021m... 46 4.4 1 (CP000716) Thermosipho melanesiensis BI429, complete genome. 46 4.4 1 (AC146484) Pan troglodytes BAC clone CH251-454A18 from Y, co... 44 4.8 2 (AX602207) Sequence 136 from Patent WO02092818. 38 5.2 4 (AL766850) Streptococcus agalactiae NEM316 complete genome, ... 38 7.0 6 (BJ387887) Dictyostelium discoideum cDNA clone:dds5k18, 5' e... 32 9.0 3 (BP219032) Homo sapiens cDNA clone: CNR06617, Sugano cDNA li... 36 9.1 3 (AC196282) Pan troglodytes chromosome 7 clone CH251-503P6, W... 44 9.5 3 (AM440561) Vitis vinifera contig VV78X272865.9, whole genome... 42 10.0 2
>(AB082543) Dictyostelium discoideum forB gene for formin homology protein B, complete cds. Length = 3726
Score = 1263 bits (637), Expect(2) = 0.0 Identities = 637/637 (100%) Strand = Plus / Minus
Query: 433 acatgttggaagaattcttcaggtgatgaagttttaacatcttcaccatagaattgtacg 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3107 acatgttggaagaattcttcaggtgatgaagttttaacatcttcaccatagaattgtacg 3048
Query: 493 gttgaattaaaggattcaagggcggtattaaattgtttttcaattaaagtgacggcatct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3047 gttgaattaaaggattcaagggcggtattaaattgtttttcaattaaagtgacggcatct 2988
Query: 553 gttgatttaccaacgaaaccacttaaaattgtctttgaagcaccttcactcttttcaact 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2987 gttgatttaccaacgaaaccacttaaaattgtctttgaagcaccttcactcttttcaact 2928
Query: 613 tcattagttagcaatgttaaacctttctttaatgaagcaacttctgaacgtaaattttga 672 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2927 tcattagttagcaatgttaaacctttctttaatgaagcaacttctgaacgtaaattttga 2868
Query: 673 attgatactctctttgcctcatcgattgcagtaaactcttgatggaattccaaaagagat 732 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2867 attgatactctctttgcctcatcgattgcagtaaactcttgatggaattccaaaagagat 2808
Query: 733 ggatgtttattctccaagaattgaattaaccaagtcattaaggttacttttgaatctgaa 792 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2807 ggatgtttattctccaagaattgaattaaccaagtcattaaggttacttttgaatctgaa 2748
Query: 793 ggtgaacgacaatccaatagaccactaagagaatccaatttgaaaccgtaaatatcacca 852 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2747 ggtgaacgacaatccaatagaccactaagagaatccaatttgaaaccgtaaatatcacca 2688
Query: 853 cgtggtgtaccaccattaatgaaattacccaatgataatacaatctctagaatttgatgg 912 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2687 cgtggtgtaccaccattaatgaaattacccaatgataatacaatctctagaatttgatgg 2628
Query: 913 aatgatttattatttttggtttccattgaaccttttaataatgcgttaatatctggtgtt 972 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2627 aatgatttattatttttggtttccattgaaccttttaataatgcgttaatatctggtgtt 2568
Query: 973 aattcttcgatttgagttgaaagtttttgtttaaagataaaacattccaatttctcagag 1032 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2567 aattcttcgatttgagttgaaagtttttgtttaaagataaaacattccaatttctcagag 2508
Query: 1033 attctattgattttactaagttcccaaaggaattgtt 1069 ||||||||||||||||||||||||||||||||||||| Sbjct: 2507 attctattgattttactaagttcccaaaggaattgtt 2471
Score = 341 bits (172), Expect(6) = 0.0 Identities = 172/172 (100%) Strand = Plus / Minus
Query: 189 ctgaacagaaattgatggttgagttgattgtggtggtttttgtgagattgaaattgaaga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3351 ctgaacagaaattgatggttgagttgattgtggtggtttttgtgagattgaaattgaaga 3292
Query: 249 ttttgaagttggagtaattggagaaacaccagattttggagcgatattaattgaagaacc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3291 ttttgaagttggagtaattggagaaacaccagattttggagcgatattaattgaagaacc 3232
Query: 309 agaagcagatggcacagatggaccagaagcagcagctttctttctagcggct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3231 agaagcagatggcacagatggaccagaagcagcagctttctttctagcggct 3180
Score = 339 bits (171), Expect(6) = 0.0 Identities = 171/171 (100%) Strand = Plus / Minus
Query: 1 aatgcagcatttaatgcatcgattgcaccaacaccaccagcgccattttgagtgaaaaca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3539 aatgcagcatttaatgcatcgattgcaccaacaccaccagcgccattttgagtgaaaaca 3480
Query: 61 tattgtgaagctcttctagatgcacgaattgcttcaccacctttcattttactcattaat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3479 tattgtgaagctcttctagatgcacgaattgcttcaccacctttcattttactcattaat 3420
Query: 121 tgatccataaaagtaccattttgtggtatatcatcatcgtcgtcgccatgg 171 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3419 tgatccataaaagtaccattttgtggtatatcatcatcgtcgtcgccatgg 3369
Score = 280 bits (141), Expect(6) = 0.0 Identities = 141/141 (100%) Strand = Plus / Minus
Query: 1288 aacttggaataattcttcaagttgtttaaattgatcattcaaattataatctttaacatt 1347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2157 aacttggaataattcttcaagttgtttaaattgatcattcaaattataatctttaacatt 2098
Query: 1348 catccaaattgaattttcaattacattattattaacttttttccattgaagaccaaccat 1407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2097 catccaaattgaattttcaattacattattattaacttttttccattgaagaccaaccat 2038
Query: 1408 tttaacagatggtactgatga 1428 ||||||||||||||||||||| Sbjct: 2037 tttaacagatggtactgatga 2017
Score = 234 bits (118), Expect(6) = 0.0 Identities = 118/118 (100%) Strand = Plus / Minus
Query: 1163 tttttggatctaaaatactgatagttggtgttgatactattgattttgaaccactaccac 1222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2281 tttttggatctaaaatactgatagttggtgttgatactattgattttgaaccactaccac 2222
Query: 1223 caccaactgctacattacttgcaccacctactggagcagttggagtagttgcagttgg 1280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2221 caccaactgctacattacttgcaccacctactggagcagttggagtagttgcagttgg 2164
Score = 163 bits (82), Expect(2) = 0.0 Identities = 82/82 (100%) Strand = Plus / Minus
Query: 1071 ctggtttaccaaaacatgatggatcctcttcttttaataattcaatttcctctgaacttg 1130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2470 ctggtttaccaaaacatgatggatcctcttcttttaataattcaatttcctctgaacttg 2411
Query: 1131 gtacaaatttcaataaagattt 1152 |||||||||||||||||||||| Sbjct: 2410 gtacaaatttcaataaagattt 2389
Score = 93.7 bits (47), Expect(6) = 0.0 Identities = 47/47 (100%) Strand = Plus / Minus
Query: 1436 ggtggtaaatttggtacagctggtgcacctggttttttcattccacc 1482 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2009 ggtggtaaatttggtacagctggtgcacctggttttttcattccacc 1963
Score = 81.8 bits (41), Expect(6) = 0.0 Identities = 41/41 (100%) Strand = Plus / Minus
Query: 1683 tagtaccattagtatctgaaggtggtgttgtaacactaaca 1723 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1762 tagtaccattagtatctgaaggtggtgttgtaacactaaca 1722
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 92845959 Number of Hits to DB: 1,715,968,112 Number of extensions: 101853219 Number of successful extensions: 8404154 Number of sequences better than 10.0: 77 Length of query: 1723 Length of database: 95,242,211,685 Length adjustment: 24 Effective length of query: 1699 Effective length of database: 97,308,875,965 Effective search space: 165327780264535 Effective search space used: 165327780264535 X1: 11 (21.8 bits) S2: 22 (44.1 bits)
|
protein update |
2009. 6.28 |
Homology vs Protein |
Query= Contig-U10863-1 (Contig-U10863-1Q) /CSM_Contig/Contig-U10863-1Q.Seq.d (1723 letters)
Database: nrp_A 3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
AB082543_1(AB082543|pid:none) Dictyostelium discoideum forB gene... 554 0.0 (Q54SP2) RecName: Full=Formin-B; 554 0.0 BC073482_1(BC073482|pid:none) Xenopus laevis hypothetical protei... 143 1e-33 AF056116_14(AF056116|pid:none) Fugu rubripes serine/threonine ki... 146 2e-33 BX324141_1(BX324141|pid:none) Zebrafish DNA sequence from clone ... 145 4e-33 BC163491_1(BC163491|pid:none) Danio rerio dishevelled associated... 145 4e-33 (Q9Y4D1) RecName: Full=Disheveled-associated activator of morpho... 141 4e-33 BC076585_1(BC076585|pid:none) Mus musculus dishevelled associate... 141 6e-33 (Q8BPM0) RecName: Full=Disheveled-associated activator of morpho... 141 6e-33 BC133280_1(BC133280|pid:none) Bos taurus dishevelled associated ... 140 1e-32 AK021890_1(AK021890|pid:none) Homo sapiens cDNA FLJ11828 fis, cl... 143 2e-32 AJ851584_1(AJ851584|pid:none) Gallus gallus mRNA for hypothetica... 142 3e-32 (Q9JL26) RecName: Full=Formin-like protein 1; AltName: Full=Form... 138 7e-31 AK131173_1(AK131173|pid:none) Mus musculus mRNA for mFLJ00304 pr... 138 7e-31 AL662804_6(AL662804|pid:none) Mouse DNA sequence from clone RP23... 138 7e-31 AB002379_1(AB002379|pid:none) Homo sapiens mRNA for KIAA0381 pro... 134 9e-31 AE014296_2497(AE014296|pid:none) Drosophila melanogaster chromos... 137 1e-30 (Q9VUC6) RecName: Full=Formin-like protein CG32138; &AE014296_2... 137 1e-30 EU831906_1(EU831906|pid:none) Synthetic construct Homo sapiens c... 133 2e-30 CR925815_2(CR925815|pid:none) Zebrafish DNA sequence from clone ... 136 2e-30 CR925815_3(CR925815|pid:none) Zebrafish DNA sequence from clone ... 136 2e-30 AK122266_1(AK122266|pid:none) Mus musculus premature mRNA for mK... 132 3e-30 (Q6ZPF4) RecName: Full=Formin-like protein 3; &AK155331_1(AK155... 135 5e-30 AK170744_1(AK170744|pid:none) Mus musculus NOD-derived CD11c +ve... 135 5e-30 AJ008112_1(AJ008112|pid:none) Homo sapiens mRNA for C17orf1 prot... 135 6e-30 BC073988_1(BC073988|pid:none) Homo sapiens formin-like 1, mRNA (... 135 6e-30 (Q8IVF7) RecName: Full=Formin-like protein 3; AltName: Full=Form... 133 2e-29 AB095934_1(AB095934|pid:none) Homo sapiens mRNA for KIAA2014 pro... 133 2e-29 AK127200_1(AK127200|pid:none) Homo sapiens cDNA FLJ45265 fis, cl... 133 2e-29 AL162062_1(AL162062|pid:none) Homo sapiens mRNA; cDNA DKFZp762B2... 133 2e-29 BC033181_1(BC033181|pid:none) Homo sapiens formin-like 3, mRNA (... 133 2e-29 AB384661_1(AB384661|pid:none) Synthetic construct DNA, clone: pF... 133 2e-29 AB244756_1(AB244756|pid:none) Homo sapiens diap3 mRNA for mammal... 129 4e-28 AL354829_4(AL354829|pid:none) Human DNA sequence from clone RP11... 129 4e-28 BC048963_1(BC048963|pid:none) Homo sapiens diaphanous homolog 3 ... 129 4e-28 AB244757_1(AB244757|pid:none) Homo sapiens diap3 mRNA for mammal... 129 4e-28 BC034952_1(BC034952|pid:none) Homo sapiens diaphanous homolog 3 ... 129 4e-28 (Q3ZK23) RecName: Full=Protein diaphanous homolog 3; AltName: Fu... 129 4e-28 AL354829_5(AL354829|pid:none) Human DNA sequence from clone RP11... 129 4e-28 BC168411_1(BC168411|pid:none) Synthetic construct Mus musculus c... 128 6e-28 AB385514_1(AB385514|pid:none) Synthetic construct DNA, clone: pF... 128 6e-28 (Q96PY5) RecName: Full=Formin-like protein 2; AltName: Full=Form... 128 6e-28 AK131316_1(AK131316|pid:none) Homo sapiens cDNA FLJ16308 fis, cl... 128 6e-28 AF513716_1(AF513716|pid:none) Mus musculus MAN mRNA, complete cds. 128 6e-28 AL845170_2(AL845170|pid:none) Mouse DNA sequence from clone RP23... 128 6e-28 AK094865_1(AK094865|pid:none) Homo sapiens cDNA FLJ37546 fis, cl... 128 6e-28 BC048004_1(BC048004|pid:none) Mus musculus formin-like 2, mRNA (... 128 6e-28 BC167804_1(BC167804|pid:none) Synthetic construct Homo sapiens c... 128 6e-28 (A2APV2) RecName: Full=Formin-like protein 2; AltName: Full=Prot... 128 6e-28 (Q9C6S1) RecName: Full=Formin-like protein 14; Short=At... 122 2e-27 BC007411_1(BC007411|pid:none) Homo sapiens diaphanous homolog 1 ... 126 3e-27 BC117257_1(BC117257|pid:none) Homo sapiens diaphanous homolog 1 ... 126 3e-27 AB209482_1(AB209482|pid:none) Homo sapiens mRNA for Diaphanous 1... 126 3e-27 DQ067453_1(DQ067453|pid:none) Homo sapiens diaphanous-1 (DIAPH1)... 126 3e-27 (O60610) RecName: Full=Protein diaphanous homolog 1; AltName: Fu... 126 3e-27 AL834396_1(AL834396|pid:none) Homo sapiens mRNA; cDNA DKFZp761P0... 126 3e-27 AY363395_1(AY363395|pid:none) Homo sapiens diaphanous 1 mRNA, co... 126 3e-27 (O08808) RecName: Full=Protein diaphanous homolog 1; AltName: Fu... 126 3e-27 AK156391_1(AK156391|pid:none) Mus musculus activated spleen cDNA... 126 3e-27 AP008216_57(AP008216|pid:none) Oryza sativa (japonica cultivar-g... 120 4e-27 AK161737_1(AK161737|pid:none) Mus musculus adult male thymus cDN... 124 8e-27 BC085191_1(BC085191|pid:none) Mus musculus diaphanous homolog 3 ... 124 8e-27 AK298509_1(AK298509|pid:none) Homo sapiens cDNA FLJ58109 partial... 124 1e-26 AE014298_186(AE014298|pid:none) Drosophila melanogaster chromoso... 120 2e-26 AE014298_187(AE014298|pid:none) Drosophila melanogaster chromoso... 120 2e-26 AB168412_1(AB168412|pid:none) Macaca fascicularis testis cDNA cl... 123 2e-26 (Q5TJ57) RecName: Full=Formin-E; AltName: Full=Diaphanous-relate... 122 4e-26 AY118439_1(AY118439|pid:none) Drosophila melanogaster RH61354 fu... 119 4e-26 (Q54WH2) RecName: Full=Formin-A; 122 5e-26 AB082542_1(AB082542|pid:none) Dictyostelium discoideum forA mRNA... 122 5e-26 BC082512_1(BC082512|pid:none) Xenopus tropicalis fmnl1 protein, ... 122 5e-26 (Q9LVN1) RecName: Full=Formin-like protein 13; Short=At... 117 6e-26 (Q54N00) RecName: Full=Formin-H; AltName: Full=Diaphanous-relate... 115 6e-26 (P0C5K5) RecName: Full=Formin-like protein 21b; Short=A... 118 1e-25 BC027845_1(BC027845|pid:none) Mus musculus formin-like 3, mRNA (... 120 1e-25 (Q9SK28) RecName: Full=Formin-like protein 18; Short=At... 117 1e-25 FN357391_19(FN357391|pid:none) Schistosoma mansoni genome sequen... 120 2e-25 AB010070_20(AB010070|pid:none) Arabidopsis thaliana genomic DNA,... 116 4e-25 (Q6ZCX3) RecName: Full=Formin-like protein 6; AltName: Full=OsFH6; 114 5e-25 AP003936_5(AP003936|pid:none) Oryza sativa Japonica Group genomi... 114 5e-25 AP004094_7(AP004094|pid:none) Oryza sativa Japonica Group genomi... 113 1e-24 AC079041_19(AC079041|pid:none) Arabidopsis thaliana chromosome 1... 115 5e-24 DQ977371_2(DQ977371|pid:none) Pan troglodytes FMNL2 (FMNL2) gene... 115 5e-24 AB170379_1(AB170379|pid:none) Macaca fascicularis brain cDNA clo... 115 5e-24 AC122160_11(AC122160|pid:none) Medicago truncatula clone mth2-23... 114 1e-23 (Q84ZL0) RecName: Full=Formin-like protein 5; AltName: Full=OsFH5; 108 2e-23 AP008213_1503(AP008213|pid:none) Oryza sativa (japonica cultivar... 108 2e-23 AC024798_8(AC024798|pid:none) Caenorhabditis elegans cosmid Y48G... 112 3e-23 BC143838_1(BC143838|pid:none) Homo sapiens diaphanous homolog 2 ... 112 3e-23 AL031053_2(AL031053|pid:none) Human DNA sequence from clone RP1-... 112 3e-23 AL031640_2(AL031640|pid:none) Drosophila melanogaster cosmid clo... 108 5e-23 BT021242_1(BT021242|pid:none) Drosophila melanogaster RE67944 fu... 107 7e-23 AK002029_1(AK002029|pid:none) Homo sapiens cDNA FLJ11167 fis, cl... 111 7e-23 AB171860_1(AB171860|pid:none) Macaca fascicularis brain cDNA clo... 110 2e-22 (P48608) RecName: Full=Protein diaphanous; &AE014134_3382(AE014... 102 6e-20 AC169120_1(AC169120|pid:none) Medicago truncatula clone mth2-84o... 101 7e-20 AC159537_10(AC159537|pid:none) Medicago truncatula clone mth2-18... 101 7e-20 AF238235_1(AF238235|pid:none) Entamoeba histolytica diaphanous p... 100 2e-19 AB005249_1(AB005249|pid:none) Arabidopsis thaliana genomic DNA, ... 99 4e-19 FN179407_1(FN179407|pid:none) Schistosoma mansoni SmDia gene for... 99 6e-19 FN357518_4(FN357518|pid:none) Schistosoma mansoni genome sequenc... 99 6e-19 (Q5TJ55) RecName: Full=Formin-D; AltName: Full=Diaphanous-relate... 98 8e-19 AP008210_319(AP008210|pid:none) Oryza sativa (japonica cultivar-... 92 2e-18 CR855232_6(CR855232|pid:none) Oryza sativa genomic DNA, chromoso... 92 2e-18 AL662989_5(AL662989|pid:none) Oryza sativa genomic DNA, chromoso... 92 2e-18 (O70566) RecName: Full=Protein diaphanous homolog 2; AltName: Fu... 97 2e-18 AK088648_1(AK088648|pid:none) Mus musculus 2 days neonate thymus... 97 2e-18 AL683856_2(AL683856|pid:none) Mouse DNA sequence from clone RP23... 97 2e-18 AL137718_1(AL137718|pid:none) Homo sapiens mRNA; cDNA DKFZp434C0... 95 7e-18 (Q6ZM86) RecName: Full=Delphilin; AltName: Full=Glutamate recept... 95 7e-18 AB061681_1(AB061681|pid:none) Drosophila melanogaster ah1644 mRN... 95 9e-18 AE014296_1255(AE014296|pid:none) Drosophila melanogaster chromos... 95 9e-18 BT003619_1(BT003619|pid:none) Drosophila melanogaster GH12052 fu... 95 9e-18 AB010070_18(AB010070|pid:none) Arabidopsis thaliana genomic DNA,... 92 6e-17 (Q1ZXK2) RecName: Full=Formin-G; 89 4e-16 FN357394_67(FN357394|pid:none) Schistosoma mansoni genome sequen... 89 6e-16 AB220161_1(AB220161|pid:none) Tetrahymena thermophila BNI2 mRNA ... 87 2e-15 (Q0GNC1) RecName: Full=Inverted formin-2; &DQ834374_1(DQ834374|... 81 9e-15 BC115423_1(BC115423|pid:none) Mus musculus RIKEN cDNA 2610204M08... 81 9e-15 (Q05858) RecName: Full=Formin; AltName: Full=Limb deformity prot... 85 9e-15 A41724(S24286;S38780;A41724)limb deformity (ld) protein - chicken 85 9e-15 (Q27J81) RecName: Full=Inverted formin-2; AltName: Full=HBEBP2-b... 81 1e-14 AL672253_2(AL672253|pid:none) Mouse DNA sequence from clone RP23... 84 2e-14 (Q9C0D6) RecName: Full=FH2 domain-containing protein 1; 79 3e-14 AK153986_1(AK153986|pid:none) Mus musculus 2 days neonate thymus... 82 5e-14 BC099931_1(BC099931|pid:none) Mus musculus RIKEN cDNA 2610204M08... 81 6e-14 BC060610_1(BC060610|pid:none) Mus musculus RIKEN cDNA 2610204M08... 81 6e-14 AK093813_1(AK093813|pid:none) Homo sapiens cDNA FLJ36494 fis, cl... 75 3e-13 CR954206_154(CR954206|pid:none) Ostreococcus tauri strain OTTH05... 79 4e-13 U40187_5(U40187|pid:none) Caenorhabditis elegans cosmid F11H8, c... 79 5e-13 AF062008_1(AF062008|pid:none) Caenorhabditis elegans cyk-1 mRNA,... 79 5e-13 U40187_4(U40187|pid:none) Caenorhabditis elegans cosmid F11H8, c... 79 5e-13 (O22824) RecName: Full=Formin-like protein 2; Short=AtF... 75 6e-13 (Q6NTV6) RecName: Full=Inverted formin-2; &BC068848_1(BC068848|... 78 9e-13 CP000587_105(CP000587|pid:none) Ostreococcus lucimarinus CCE9901... 78 1e-12 AE014134_713(AE014134|pid:none) Drosophila melanogaster chromoso... 77 2e-12 S11515(S11515) formin - mouse &X53599_1(X53599|pid:none) 77 2e-12 AE014134_715(AE014134|pid:none) Drosophila melanogaster chromoso... 77 2e-12 AE014134_719(AE014134|pid:none) Drosophila melanogaster chromoso... 77 2e-12 BT021476_1(BT021476|pid:none) Drosophila melanogaster AT04667 fu... 77 2e-12 AE014134_711(AE014134|pid:none) Drosophila melanogaster chromoso... 77 2e-12 AE014134_716(AE014134|pid:none) Drosophila melanogaster chromoso... 77 2e-12 AE014134_712(AE014134|pid:none) Drosophila melanogaster chromoso... 77 2e-12 (Q05860) RecName: Full=Formin-1; AltName: Full=Limb deformity pr... 77 2e-12 AK173244_1(AK173244|pid:none) Mus musculus mRNA for mKIAA1727 pr... 76 4e-12 BC008756_1(BC008756|pid:none) Homo sapiens inverted formin, FH2 ... 75 7e-12 (Q9SE97) RecName: Full=Formin-like protein 1; Short=AtF... 74 2e-11 (Q9JL04) RecName: Full=Formin-2; &BC094606_1(BC094606|pid:none) 71 1e-10 DQ472188_1(DQ472188|pid:none) Trypanosoma cruzi strain CL Brener... 71 1e-10 AF218940_1(AF218940|pid:none) Mus musculus formin-2 (Fmn2) mRNA,... 71 1e-10 AF106580_3(AF106580|pid:none) Caenorhabditis elegans cosmid F58B... 70 2e-10 (Q9NZ56) RecName: Full=Formin-2; &AL359918_1(AL359918|pid:none)... 70 2e-10 AK298141_1(AK298141|pid:none) Homo sapiens cDNA FLJ60748 complet... 70 2e-10 AK297716_1(AK297716|pid:none) Homo sapiens cDNA FLJ55858 complet... 70 2e-10 AF218942_1(AF218942|pid:none) Homo sapiens clone r56121 formin 2... 70 2e-10 AB209153_1(AB209153|pid:none) Homo sapiens mRNA for formin 2 var... 70 3e-10 AL844504_303(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 69 5e-10 (Q8S0F0) RecName: Full=Formin-like protein 1; AltName: Full=OsFH... 69 7e-10 CR391989_7(CR391989|pid:none) Zebrafish DNA sequence from clone ... 68 1e-09 AJ719683_1(AJ719683|pid:none) Gallus gallus mRNA for hypothetica... 67 3e-09 CR940353_507(CR940353|pid:none) Theileria annulata strain Ankara... 66 3e-09 BC060607_1(BC060607|pid:none) Mus musculus formin homology 2 dom... 66 4e-09 AB051482_1(AB051482|pid:none) Homo sapiens mRNA for KIAA1695 pro... 66 4e-09 EF577429_1(EF577429|pid:none) Trypanosoma brucei TREU927 formin ... 66 4e-09 BC081563_1(BC081563|pid:none) Homo sapiens formin homology 2 dom... 66 4e-09 (Q2V2M9) RecName: Full=FH1/FH2 domain-containing protein 3; AltN... 66 4e-09 (Q76LL6) RecName: Full=FH1/FH2 domain-containing protein 3; AltN... 66 4e-09 AB078609_1(AB078609|pid:none) Mus musculus FHOS2 mRNA for FHOS2S... 66 4e-09 BC050670_1(BC050670|pid:none) Homo sapiens formin homology 2 dom... 66 4e-09 AL834480_1(AL834480|pid:none) Homo sapiens mRNA; cDNA DKFZp762L0... 66 4e-09 BT072589_1(BT072589|pid:none) Salmo salar clone ssal-rgf-531-262... 65 6e-09 AK297755_1(AK297755|pid:none) Homo sapiens cDNA FLJ58678 complet... 65 8e-09 CP000586_129(CP000586|pid:none) Ostreococcus lucimarinus CCE9901... 65 8e-09 AE017350_233(AE017350|pid:none) Cryptococcus neoformans var. neo... 65 1e-08 FN392319_1528(FN392319|pid:none) Pichia pastoris GS115 chromosom... 64 1e-08 BC090338_1(BC090338|pid:none) Rattus norvegicus cDNA clone IMAGE... 64 2e-08 AE014188_184(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 63 3e-08 AC171534_6(AC171534|pid:none) Medicago truncatula chromosome 7 c... 60 3e-08 CR382137_781(CR382137|pid:none) Debaryomyces hansenii strain CBS... 62 5e-08 (Q0D519) RecName: Full=Formin-like protein 13; AltName: Full=OsF... 62 8e-08 FN392322_664(FN392322|pid:none) Pichia pastoris GS115 chromosome... 61 1e-07 DQ977230_3(DQ977230|pid:none) Pan paniscus FMNL2 (FMNL2) gene, p... 61 1e-07 BT034550_1(BT034550|pid:none) Zea mays full-length cDNA clone ZM... 61 1e-07 BT067466_1(BT067466|pid:none) Zea mays full-length cDNA clone ZM... 61 1e-07 DQ472189_1(DQ472189|pid:none) Trypanosoma cruzi strain CL Brener... 60 2e-07 DQ472191_1(DQ472191|pid:none) Trypanosoma cruzi strain CL Brener... 60 2e-07 FN357536_13(FN357536|pid:none) Schistosoma mansoni genome sequen... 60 3e-07 AB220160_1(AB220160|pid:none) Tetrahymena thermophila BNI1 mRNA ... 59 4e-07 BX294023_3(BX294023|pid:none) Neurospora crassa DNA linkage grou... 59 7e-07 AC144502_19(AC144502|pid:none) Medicago truncatula clone mth2-5p... 58 9e-07 CU928169_24(CU928169|pid:none) Kluyveromyces thermotolerans stra... 58 9e-07 EU954612_1(EU954612|pid:none) Zea mays clone 1473889 AFH1 mRNA, ... 58 9e-07 (O23373) RecName: Full=Formin-like protein 3; Short=AtF... 58 1e-06 AP003985_14(AP003985|pid:none) Oryza sativa Japonica Group genom... 58 1e-06 AM989980_87(AM989980|pid:none) Zygosaccharomyces rouxii strain C... 57 3e-06 CU928178_716(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 57 3e-06 CR382123_99(CR382123|pid:none) Kluyveromyces lactis strain NRRL ... 56 5e-06 BT054181_1(BT054181|pid:none) Zea mays full-length cDNA clone ZM... 56 5e-06 AM431362_2(AM431362|pid:none) Vitis vinifera contig VV78X080721.... 55 6e-06 AF213695_1(AF213695|pid:none) Nicotiana tabacum FH protein NFH1 ... 55 6e-06 AM441423_2(AM441423|pid:none) Vitis vinifera contig VV78X084678.... 54 1e-05 (P41832) RecName: Full=Protein BNI1; AltName: Full=Synthetic let... 54 2e-05 L31766_1(L31766|pid:none) Saccharomyces cerevisiae synthetic let... 54 2e-05 AP008208_2488(AP008208|pid:none) Oryza sativa (japonica cultivar... 54 2e-05 AP007164_41(AP007164|pid:none) Aspergillus oryzae RIB40 genomic ... 53 3e-05 AM502242_77(AM502242|pid:none) Leishmania infantum chromosome 24. 53 3e-05 AM920427_434(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 53 3e-05 A71416(A71416) hypothetical protein - Arabidopsis thaliana &AL1... 53 4e-05 (P78621) RecName: Full=Cytokinesis protein sepA; AltName: Full=F... 53 4e-05 FJ826614_1(FJ826614|pid:none) Epichloe festucae strain E2368 Sep... 52 5e-05 BC125855_1(BC125855|pid:none) Danio rerio zgc:153126, mRNA (cDNA... 52 9e-05 CU928170_98(CU928170|pid:none) Kluyveromyces thermotolerans stra... 51 1e-04 AF113615_1(AF113615|pid:none) Homo sapiens FH1/FH2 domain-contai... 49 4e-04 CT005263_108(CT005263|pid:none) Leishmania major strain Friedlin... 49 7e-04 (Q6P9Q4) RecName: Full=FH1/FH2 domain-containing protein 1; AltN... 48 0.001 BC014364_1(BC014364|pid:none) Homo sapiens formin 2, mRNA (cDNA ... 48 0.001 AB041046_1(AB041046|pid:none) Homo sapiens mRNA for p127, comple... 48 0.001 AY192154_1(AY192154|pid:none) Homo sapiens FHOS mRNA, complete c... 48 0.001 (Q9Y613) RecName: Full=FH1/FH2 domain-containing protein 1; AltN... 48 0.001 AB209584_1(AB209584|pid:none) Homo sapiens mRNA for P127 variant... 48 0.001 (O04532) RecName: Full=Formin-like protein 8; Short=AtF... 47 0.002 (O94532) RecName: Full=Formin-3; &AL035247_5(AL035247|pid:none)... 47 0.002 (Q10719) RecName: Full=Cell fusion protein fus1; &CU329670_1989... 47 0.002 (Q9XIE0) RecName: Full=Formin-like protein 7; Short=AtF... 47 0.002 DQ977117_8(DQ977117|pid:none) Macaca nemestrina FMNL2 (FMNL2) ge... 45 0.011 (Q0DLG0) RecName: Full=Formin-like protein 14; AltName: Full=OsF... 44 0.014 Z78013_8(Z78013|pid:none) Caenorhabditis elegans Cosmid F15B9, c... 44 0.024 T20966(T20966)hypothetical protein F15B9.4 - Caenorhabditis eleg... 44 0.024 AP008207_3358(AP008207|pid:none) Oryza sativa (japonica cultivar... 42 0.053 AJ312390_1(AJ312390|pid:none) Mus musculus mRNA for nonmuscle he... 41 0.12 AK148323_1(AK148323|pid:none) Mus musculus B16 F10Y cells cDNA, ... 41 0.12 AK147211_1(AK147211|pid:none) Mus musculus 15 days embryo liver ... 41 0.12 BT065693_1(BT065693|pid:none) Zea mays full-length cDNA clone ZM... 41 0.15 (Q62812) RecName: Full=Myosin-9; AltName: Full=Myosin heavy chai... 41 0.15 FM992691_467(FM992691|pid:none) Candida dubliniensis CD36 chromo... 40 0.34 CP000123_803(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 39 0.45 BX897699_732(BX897699|pid:none) Bartonella henselae strain Houst... 39 0.76 CP000253_1644(CP000253|pid:none) Staphylococcus aureus subsp. au... 37 2.9 (Q54G05) RecName: Full=Putative leucine-rich repeat-containing p... 37 2.9 AP009324_1625(AP009324|pid:none) Staphylococcus aureus subsp. au... 37 2.9 AJ298076_1(AJ298076|pid:none) Mus musculus partial Tpr gene for ... 37 2.9 AY526355_2(AY526355|pid:none) Cloning vector pBR-XJ160, complete... 37 2.9 AF339478_2(AF339478|pid:none) Kyzylagach virus strain LEIV 65A n... 37 2.9 AF398392_1(AF398392|pid:none) Kyzylagach virus glycoprotein (E1)... 37 2.9 U69668_1(U69668|pid:none) Human nuclear pore complex-associated ... 36 3.8 CP000990_3(CP000990|pid:none) Borrelia duttonii Ly plasmid pl70,... 36 3.8 CP001230_1698(CP001230|pid:none) Persephonella marina EX-H1, com... 36 3.8 U52576_1(U52576|pid:none) Highlands J virus envelope glycoprotei... 36 3.8 U52589_1(U52589|pid:none) Highlands J virus envelope glycoprotei... 36 3.8 AF339476_2(AF339476|pid:none) Highlands J virus strain B-230 non... 36 3.8 U52584_1(U52584|pid:none) Highlands J virus envelope glycoprotei... 36 3.8 U52580_1(U52580|pid:none) Highlands J virus envelope glycoprotei... 36 3.8 AE014186_23(AE014186|pid:none) Plasmodium falciparum 3D7 chromos... 36 5.0 X53947_1(X53947|pid:none) Yeast MYO1 gene for myosin heavy chain... 36 5.0 CP000510_306(CP000510|pid:none) Psychromonas ingrahamii 37, comp... 35 6.5 CP001072_1479(CP001072|pid:none) Helicobacter pylori Shi470, com... 35 6.5 AM180355_1070(AM180355|pid:none) Clostridium difficile 630 compl... 35 6.5 AF339477_2(AF339477|pid:none) Babanki virus strain DakAry 251 no... 35 6.5 U52581_1(U52581|pid:none) Highlands J virus envelope glycoprotei... 35 6.5 (P03316) RecName: Full=Structural polyprotein; AltName: Full=p13... 35 6.5 AF192888_1(AF192888|pid:none) Sindbis virus isolate B448 structu... 35 6.5 (P27285) RecName: Full=Structural polyprotein; AltName: Full=p13... 35 6.5 U38304_2(U38304|pid:none) Sindbis-like virus isolate Girdwood S.... 35 6.5 M24200_1(M24200|pid:none) Sindbis virus glycoprotein PE2 gene, 3... 35 6.5 U38305_2(U38305|pid:none) Sindbis-like virus isolate S.A.AR86, c... 35 6.5 CP001083_74(CP001083|pid:none) Clostridium botulinum Ba4 str. 65... 35 8.5 U64862_5(U64862|pid:none) Caenorhabditis elegans cosmid ZC8, com... 35 8.5 U64862_4(U64862|pid:none) Caenorhabditis elegans cosmid ZC8, com... 35 8.5 CP000048_558(CP000048|pid:none) Borrelia hermsii DAH, complete g... 35 8.5 U64862_3(U64862|pid:none) Caenorhabditis elegans cosmid ZC8, com... 35 8.5 U52588_1(U52588|pid:none) Highlands J virus envelope glycoprotei... 35 8.5 U52585_1(U52585|pid:none) Highlands J virus envelope glycoprotei... 35 8.5 U52590_1(U52590|pid:none) Highlands J virus envelope glycoprotei... 35 8.5
>AB082543_1(AB082543|pid:none) Dictyostelium discoideum forB gene for formin homology protein B, complete cds. Length = 1126
Score = 554 bits (1428), Expect(2) = 0.0 Identities = 298/356 (83%), Positives = 299/356 (83%) Frame = -3
Query: 1070 QQFLWELSKINRISEKLECFIFKQKLSTQIEELTPDINALLKGSMETKNNKSFHQILEIV 891 +QFLWELSKINRISEKLECFIFKQKLSTQIEELTPDINALLKGSMETKNNKSFHQILEIV Sbjct: 766 EQFLWELSKINRISEKLECFIFKQKLSTQIEELTPDINALLKGSMETKNNKSFHQILEIV 825
Query: 890 LSLGNFINGGTPRGDIYGFKLDSLSGLLDCRSPSDSKVTLMTWLIQFLENKHPSLLEFHQ 711 LSLGNFINGGTPRGDIYGFKLDSLSGLLDCRSPSDSKVTLMTWLIQFLENKHPSLLEFHQ Sbjct: 826 LSLGNFINGGTPRGDIYGFKLDSLSGLLDCRSPSDSKVTLMTWLIQFLENKHPSLLEFHQ 885
Query: 710 EFTAIDEAKRVSIQNLRSEVASLKKGLTLLTNEVEKSEGASKTILSGFVGKSTDAVTLIE 531 EFTAIDEAKRVSIQNLRSEVASLKKGLTLLTNEVEKSEGASKTILSGFVGKSTDAVTLIE Sbjct: 886 EFTAIDEAKRVSIQNLRSEVASLKKGLTLLTNEVEKSEGASKTILSGFVGKSTDAVTLIE 945
Query: 530 KQFNTALESFNSTVQFYGEDVKTSSPEEFFQHVSKFKNEFKRTIESIQKERENVQKLAAR 351 KQFNTALESFNSTVQFYGEDVKTSSPEEFFQHVSKFKNEFKRTIESIQKERENVQKLAAR Sbjct: 946 KQFNTALESFNSTVQFYGEDVKTSSPEEFFQHVSKFKNEFKRTIESIQKERENVQKLAAR 1005
Query: 350 KKXXXXXXXXXXXXXXSINIAPKSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 171 KK SINIAPKSGV Sbjct: 1006 KKAAASGPSVPSASGSSINIAPKSGVSPITPTSKSSISISQKPPQSTQPSISVQQQQQQH 1065
Query: 170 XXXXXXXXXQNGTFMDQLMSKMKGGEAIRASRRASQYVFTQNGAGGVGAIDALNAA 3 QNGTFMDQLMSKMKGGEAIRASRRASQYVFTQNGAGGVGAIDALNAA Sbjct: 1066 HGDDDDDIPQNGTFMDQLMSKMKGGEAIRASRRASQYVFTQNGAGGVGAIDALNAA 1121
Score = 146 bits (369), Expect(2) = 0.0 Identities = 85/157 (54%), Positives = 88/157 (56%), Gaps = 32/157 (20%) Frame = -2
Query: 1446 NLPPKKSSVPSVKMVGLQWKKVNNNVIENSIWMNVKDYNLNDQFKQLEELFQVKKTNCNY 1267 NLPPKKSSVPSVKMVGLQWKKVNNNVIENSIWMNVKDYNLNDQFKQLEELFQVKK Sbjct: 609 NLPPKKSSVPSVKMVGLQWKKVNNNVIENSIWMNVKDYNLNDQFKQLEELFQVKKPTATT 668
Query: 1266 XXXXXXXXXXXXXXXXXWFK--------------------------------INSINTNY 1183 K ++ TN Sbjct: 669 PTAPVGGASNVAVGGGSGSKSIVSTPTISILDPKRSQAIMIMLSRFKISFPDLSKAITNL 728
Query: 1182 QYFRSKXXXXKSLLKFVPSSEEIELLKEEDPSCFGKP 1072 + KSLLKFVPSSEEIELLKEEDPSCFGKP Sbjct: 729 DESKLNLEDAKSLLKFVPSSEEIELLKEEDPSCFGKP 765
Score = 43.1 bits (100), Expect = 0.031 Identities = 19/19 (100%), Positives = 19/19 (100%) Frame = -2
Query: 1722 VSVTTPPSDTNGTTSPPIE 1666 VSVTTPPSDTNGTTSPPIE Sbjct: 517 VSVTTPPSDTNGTTSPPIE 535
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3204285 Number of Hits to DB: 2,033,124,406 Number of extensions: 34432887 Number of successful extensions: 114994 Number of sequences better than 10.0: 273 Number of HSP's gapped: 114774 Number of HSP's successfully gapped: 325 Length of query: 574 Length of database: 1,040,966,779 Length adjustment: 134 Effective length of query: 440 Effective length of database: 611,592,589 Effective search space: 269100739160 Effective search space used: 269100739160 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 32 (16.9 bits)
|
PSORT |
|
VS (DIR, S) |
1 |
VH (FL, L) |
0 |
VF (FL, S) |
0 |
AH (FL, L) |
0 |
AF (FL, S) |
1 |
SL (DIR, L) |
0 |
SS (DIR, S) |
0 |
SH (FL, L) |
0 |
SF (FL, S) |
0 |
CH (FL, L) |
4 |
CF (FL, S) |
0 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
0 |
FC-IC (SUB) |
0 |