Contig-U10833-1
Contig ID Contig-U10833-1
Contig update 2002.12.18
Contig sequence
>Contig-U10833-1 (Contig-U10833-1Q) /CSM_Contig/Contig-U10833-1Q.Seq.d
GAGTATAGTAAAGAGGAGAGACAATCAAAGATAACGGAACGAGAGGAACT
ACTATTTCAAATGGATTTATTGGAGGATGAAGACGAAGATGACGGAGTCA
ACATATGGGATGAACCAACAGAGAATATCATCACAGAGAAAGTACACACC
ACAGAATACGATATAAATAAAAGCAAAGAGAATAAAGATGATCAAGACGA
TGAAGTGGTTAAATTTGCATCATTGAATAAATTGGTGGAACATTTAACAC
ACGACTCAAAGCATGATTTACAATTCTTAAAAACCTTTTTAATGACCTAT
CAATCGTTTTGCACACCAGAGAAGTTGATGTCAAAACTCCAACAACGTTA
CAACTGTCCATCGGGTCATGACGAGATGGCCACTAGAAACATCCAAATTA
GGGTCATCAATGTGTTGAAAGGTTGGGTGGACAATTATTACTCGGATTTC
GATGATAAATTAATTGCAATGTTACGTACATTCATCGACCAAATTCAAAT
TAAATTCCCCGCACCTGCAAGTGCCGTCAATAAATCCCTAACAAAGATGG
TGGAGAAACTCTCACCAGTGAACGATAGCAAACACATTTTCAATGAGAAA
ACAC----------CGAATTTGAAATCTATAGAAACATTAAACCACCCGA
ACTCTTAAATCAATCTTGGAATAAAACAAAACTAAAATCACGTGCTCCAA
ACGTTTTAAAGATGATCGATCGTTTCAACTCCGTTTCAATGTGGGTGGCC
ACAATGATCATTCAAACCACAAAAGTTAAAGCACGTGCTCGTATGATGAC
TCGTTTCATAAAGATCGCAGATCATTTGAAAAATTTAAATAATTACAATT
CCCTTATGGCAATCATCGCTGGTCTTAACTTTTCCTCGGTTTATCGTCTA
AAGTATACTCGTGAAGAGTTATCCGCTCAAACTATGCGTACCTATTCCGA
TTTAGAAAAGATTATGAACTCTGAAGGTTCCTTTAAAACCTACAGAACTC
GTCTTCAAAATGTTCCTCCAATGTTACCTTATTTGGGTGTTCATCTAACC
GATCTCACTTTTATCGATGAAAATCCAAATAATTTCGTCACTGACGTTGG
TGGTAAACAGGTTAGTCCTAATCAATTTCACAAAGAGAACCCTAGTTTTT
AAAATCATCTCTTTGATTCAAGAAACTCAAGTCGTACCTTACAATCTTCA
ACCAGTTCATCAAATTCAAGAGTTTTTATTAAATATTAGAAGTGATCTCA
AAGCTCATACTCTCGATCAATATCAACAAGAATTATATAGAGAATCACTT
AAAAGAGAACCAAAGAAAGCTCAAAGATCTGATGTTCTTTA

Gap gap included
Contig length 1331
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 1931169
End point 1932501
Strand (PLUS/MINUS) PLUS
Number of clones 6
Number of EST 7
Link to clone list U10833
List of clone(s)

est1=AFE514F,1,605
est2=AFK782Z,606,1215
est3=AFE514Z,621,1321
est4=CHR534Z,653,1316
est5=AHJ308Z,661,1282
est6=SLA635Z,744,1333
est7=AFE512Z,875,1217
Translated Amino Acid sequence
EYSKEERQSKITEREELLFQMDLLEDEDEDDGVNIWDEPTENIITEKVHTTEYDINKSKE
NKDDQDDEVVKFASLNKLVEHLTHDSKHDLQFLKTFLMTYQSFCTPEKLMSKLQQRYNCP
SGHDEMATRNIQIRVINVLKGWVDNYYSDFDDKLIAMLRTFIDQIQIKFPAPASAVNKSL
TKMVEKLSPVNDSKHIFNEKT---

---EFEIYRNIKPPELLNQSWNKTKLKSRAPNVLKMIDRFNSVSMWVATMIIQTTKVKAR
ARMMTRFIKIADHLKNLNNYNSLMAIIAGLNFSSVYRLKYTREELSAQTMRTYSDLEKIM
NSEGSFKTYRTRLQNVPPMLPYLGVHLTDLTFIDENPNNFVTDVGGKQVSPNQFHKENPS
F*nhlfdsrnssrtlqsstsssnsrvfiky*k*sqssysrsistrii*rit*krtkessk
i*csl


Translated Amino Acid sequence (All Frames)
Frame A:
EYSKEERQSKITEREELLFQMDLLEDEDEDDGVNIWDEPTENIITEKVHTTEYDINKSKE
NKDDQDDEVVKFASLNKLVEHLTHDSKHDLQFLKTFLMTYQSFCTPEKLMSKLQQRYNCP
SGHDEMATRNIQIRVINVLKGWVDNYYSDFDDKLIAMLRTFIDQIQIKFPAPASAVNKSL
TKMVEKLSPVNDSKHIFNEKT---

---ri*nl*kh*ttrtlksile*nktkitcskrfkddrsfqlrfnvgghndhsnhks*st
csyddsfhkdrrsfekfk*lqfpygnhrws*lflglsskvys*rvirsnyaylfrfrkdy
el*rfl*nlqnssskcssnvtlfgcssnrshfyr*ksk*frh*rww*tg*s*sisqrep*
flkssl*fkklksyltifnqfikfksfy*ilevisklilsininknyienhlkenqrklk
dlmff

Frame B:
sivkrrdnqr*rnernyyfkwiywrmktkmtestygmnqqrissqrkytpqnti*ikakr
ikmiktmkwlnlhh*inwwni*httqsmiyns*kpf**pinrfahqrs*cqnsnnvttvh
rvmtrwpletsklgssmc*kvgwtiitrismin*lqcyvhsstkfklnsphlqvpsinp*
qrwwrnshq*tiantfsmrkh---

---EFEIYRNIKPPELLNQSWNKTKLKSRAPNVLKMIDRFNSVSMWVATMIIQTTKVKAR
ARMMTRFIKIADHLKNLNNYNSLMAIIAGLNFSSVYRLKYTREELSAQTMRTYSDLEKIM
NSEGSFKTYRTRLQNVPPMLPYLGVHLTDLTFIDENPNNFVTDVGGKQVSPNQFHKENPS
F*nhlfdsrnssrtlqsstsssnsrvfiky*k*sqssysrsistrii*rit*krtkessk
i*csl

Frame C:
v**rgetikdngtrgttisngfigg*rrr*rsqhmg*tnreyhhresthhriryk*kqre
*r*srr*sg*iciie*iggtfntrlka*ftilknlfndlsivlhtrevdvktpttlqlsi
gs*rdgh*khpn*ghqcverlggqlllgfr**incnvtyihrpnsn*iprtckcrq*ipn
kdggetltser*qthfq*en---

---nlksietlnhpns*inlgikqn*nhvlqtf*r*sivstpfqcgwpq*sfkpqklkhv
lv**lvs*rsqii*ki*iitiplwqsslvltfprfiv*silvksyplklcvpipi*krl*
tlkvplkptelvfkmflqcyliwvfi*pisllsmkiqiissltlvvnrlvlinftkrtlv
fkiisliqetqvvpynlqpvhqiqefllnirsdlkahtldqyqqelyreslkrepkkaqr
sdvl

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U10833-1 (Contig-U10833-1Q)
/CSM_Contig/Contig-U10833-1Q.Seq.d
(1341 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U10833-1 (Contig-U10833-1Q) /CSM_Contig/Conti... 2599 0.0
Contig-U11083-1 (Contig-U11083-1Q) /CSM_Contig/Conti... 38 0.024
Contig-U14346-1 (Contig-U14346-1Q) /CSM_Contig/Conti... 36 0.095
Contig-U11361-1 (Contig-U11361-1Q) /CSM_Contig/Conti... 36 0.095
Contig-U09639-1 (Contig-U09639-1Q) /CSM_Contig/Conti... 36 0.095
Contig-U05087-1 (Contig-U05087-1Q) /CSM_Contig/Conti... 36 0.095
Contig-U05055-1 (Contig-U05055-1Q) /CSM_Contig/Conti... 36 0.095
Contig-U03667-1 (Contig-U03667-1Q) /CSM_Contig/Conti... 36 0.095
Contig-U01321-1 (Contig-U01321-1Q) /CSM_Contig/Conti... 36 0.095
Contig-U14729-1 (Contig-U14729-1Q) /CSM_Contig/Conti... 34 0.38

>Contig-U10833-1 (Contig-U10833-1Q) /CSM_Contig/Contig-U10833-1Q.Seq.d
Length = 1341

Score = 2599 bits (1311), Expect = 0.0
Identities = 1341/1341 (100%)
Strand = Plus / Plus


Query: 1 gagtatagtaaagaggagagacaatcaaagataacggaacgagaggaactactatttcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagtatagtaaagaggagagacaatcaaagataacggaacgagaggaactactatttcaa 60


Query: 61 atggatttattggaggatgaagacgaagatgacggagtcaacatatgggatgaaccaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atggatttattggaggatgaagacgaagatgacggagtcaacatatgggatgaaccaaca 120


Query: 121 gagaatatcatcacagagaaagtacacaccacagaatacgatataaataaaagcaaagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagaatatcatcacagagaaagtacacaccacagaatacgatataaataaaagcaaagag 180


Query: 181 aataaagatgatcaagacgatgaagtggttaaatttgcatcattgaataaattggtggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aataaagatgatcaagacgatgaagtggttaaatttgcatcattgaataaattggtggaa 240


Query: 241 catttaacacacgactcaaagcatgatttacaattcttaaaaacctttttaatgacctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catttaacacacgactcaaagcatgatttacaattcttaaaaacctttttaatgacctat 300


Query: 301 caatcgttttgcacaccagagaagttgatgtcaaaactccaacaacgttacaactgtcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caatcgttttgcacaccagagaagttgatgtcaaaactccaacaacgttacaactgtcca 360


Query: 361 tcgggtcatgacgagatggccactagaaacatccaaattagggtcatcaatgtgttgaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcgggtcatgacgagatggccactagaaacatccaaattagggtcatcaatgtgttgaaa 420


Query: 421 ggttgggtggacaattattactcggatttcgatgataaattaattgcaatgttacgtaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggttgggtggacaattattactcggatttcgatgataaattaattgcaatgttacgtaca 480


Query: 481 ttcatcgaccaaattcaaattaaattccccgcacctgcaagtgccgtcaataaatcccta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttcatcgaccaaattcaaattaaattccccgcacctgcaagtgccgtcaataaatcccta 540


Query: 541 acaaagatggtggagaaactctcaccagtgaacgatagcaaacacattttcaatgagaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acaaagatggtggagaaactctcaccagtgaacgatagcaaacacattttcaatgagaaa 600


Query: 601 acacnnnnnnnnnncgaatttgaaatctatagaaacattaaaccacccgaactcttaaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 acacnnnnnnnnnncgaatttgaaatctatagaaacattaaaccacccgaactcttaaat 660


Query: 661 caatcttggaataaaacaaaactaaaatcacgtgctccaaacgttttaaagatgatcgat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 caatcttggaataaaacaaaactaaaatcacgtgctccaaacgttttaaagatgatcgat 720


Query: 721 cgtttcaactccgtttcaatgtgggtggccacaatgatcattcaaaccacaaaagttaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cgtttcaactccgtttcaatgtgggtggccacaatgatcattcaaaccacaaaagttaaa 780


Query: 781 gcacgtgctcgtatgatgactcgtttcataaagatcgcagatcatttgaaaaatttaaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gcacgtgctcgtatgatgactcgtttcataaagatcgcagatcatttgaaaaatttaaat 840


Query: 841 aattacaattcccttatggcaatcatcgctggtcttaacttttcctcggtttatcgtcta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aattacaattcccttatggcaatcatcgctggtcttaacttttcctcggtttatcgtcta 900


Query: 901 aagtatactcgtgaagagttatccgctcaaactatgcgtacctattccgatttagaaaag 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aagtatactcgtgaagagttatccgctcaaactatgcgtacctattccgatttagaaaag 960


Query: 961 attatgaactctgaaggttcctttaaaacctacagaactcgtcttcaaaatgttcctcca 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 attatgaactctgaaggttcctttaaaacctacagaactcgtcttcaaaatgttcctcca 1020


Query: 1021 atgttaccttatttgggtgttcatctaaccgatctcacttttatcgatgaaaatccaaat 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 atgttaccttatttgggtgttcatctaaccgatctcacttttatcgatgaaaatccaaat 1080


Query: 1081 aatttcgtcactgacgttggtggtaaacaggttagtcctaatcaatttcacaaagagaac 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 aatttcgtcactgacgttggtggtaaacaggttagtcctaatcaatttcacaaagagaac 1140


Query: 1141 cctagtttttaaaatcatctctttgattcaagaaactcaagtcgtaccttacaatcttca 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 cctagtttttaaaatcatctctttgattcaagaaactcaagtcgtaccttacaatcttca 1200


Query: 1201 accagttcatcaaattcaagagtttttattaaatattagaagtgatctcaaagctcatac 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 accagttcatcaaattcaagagtttttattaaatattagaagtgatctcaaagctcatac 1260


Query: 1261 tctcgatcaatatcaacaagaattatatagagaatcacttaaaagagaaccaaagaaagc 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 tctcgatcaatatcaacaagaattatatagagaatcacttaaaagagaaccaaagaaagc 1320


Query: 1321 tcaaagatctgatgttcttta 1341
|||||||||||||||||||||
Sbjct: 1321 tcaaagatctgatgttcttta 1341


>Contig-U11083-1 (Contig-U11083-1Q) /CSM_Contig/Contig-U11083-1Q.Seq.d
Length = 2013

Score = 38.2 bits (19), Expect = 0.024
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 576 tagcaaacacattttcaat 594
|||||||||||||||||||
Sbjct: 1116 tagcaaacacattttcaat 1134


>Contig-U14346-1 (Contig-U14346-1Q) /CSM_Contig/Contig-U14346-1Q.Seq.d
Length = 653

Score = 36.2 bits (18), Expect = 0.095
Identities = 18/18 (100%)
Strand = Plus / Minus


Query: 449 tcgatgataaattaattg 466
||||||||||||||||||
Sbjct: 148 tcgatgataaattaattg 131


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,609
Number of Sequences: 6905
Number of extensions: 14609
Number of successful extensions: 1569
Number of sequences better than 10.0: 160
length of query: 1341
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1325
effective length of database: 5,564,391
effective search space: 7372818075
effective search space used: 7372818075
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.22
Homology vs DNA
Query= Contig-U10833-1 (Contig-U10833-1Q) /CSM_Contig/Contig-U10833-1Q.Seq.d
(1341 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(U53884) Dictyostelium discoideum aimless RasGEF (aleA) mRNA... 1197 0.0 1
(AY160090) Dictyostelium discoideum nucleotide exchange fact... 1197 0.0 1
(BJ323340) Dictyostelium discoideum cDNA clone:dda10k03, 5' ... 1197 0.0 1
(BJ343342) Dictyostelium discoideum cDNA clone:dda22d21, 3' ... 997 0.0 2
(BJ339716) Dictyostelium discoideum cDNA clone:dda10k03, 3' ... 967 0.0 2
(BJ386135) Dictyostelium discoideum cDNA clone:ddc57c09, 3' ... 904 0.0 2
(BJ353168) Dictyostelium discoideum cDNA clone:dda49p01, 3' ... 888 0.0 2
(AU033342) Dictyostelium discoideum slug cDNA, clone SLA635. 724 0.0 2
(BJ339701) Dictyostelium discoideum cDNA clone:dda10g03, 3' ... 674 0.0 1
(AY160104) Dictyostelium discoideum nucleotide exchange fact... 64 1e-05 1
(EC761105) PSE00007861 rw_mgpallid Polysphondylium pallidum ... 38 0.045 2
(BD453025) Diagnosis of Diseases Associated with tumor suppr... 36 0.095 6
(AX344503) Sequence 350 from Patent WO0200926. 36 0.095 6
(AX251504) Sequence 472 from Patent WO0168912. 36 0.095 6
(AC095063) Homo sapiens BAC clone RP11-533K12 from 4, comple... 44 0.28 3
(AF474377) Dictyostelium discoideum Ras GTP exchange factor ... 46 0.98 3
(AY160100) Dictyostelium discoideum nucleotide exchange fact... 46 1.8 3
(AC172888) Brassica rapa subsp. pekinensis clone KBrS007I12,... 34 1.8 2
(AC232086) Solanum tuberosum strain Diploid genotype RH89-03... 42 2.0 2
(BJ404318) Dictyostelium discoideum cDNA clone:dds28l03, 3' ... 40 2.6 2
(BJ349087) Dictyostelium discoideum cDNA clone:dda35h11, 3' ... 40 2.8 2
(BJ445185) Dictyostelium discoideum cDNA clone:ddv58p13, 3' ... 40 2.9 2
(AU284824) Dictyostelium discoideum gamete cDNA clone:FC-BM0... 40 3.0 2
(AU284806) Dictyostelium discoideum gamete cDNA clone:FC-BL1... 40 3.1 2
(CU041255) Mouse DNA sequence *** SEQUENCING IN PROGRESS ***... 44 3.2 4
(AC018741) Homo sapiens BAC clone RP11-458J18 from 2, comple... 46 3.4 1
(AC073851) Homo sapiens chromosome 2 clone RP11-705L19, WORK... 46 3.4 1
(AC018601) Homo sapiens clone RP11-28G15, LOW-PASS SEQUENCE ... 46 3.4 1
(AC018565) Homo sapiens chromosome 3 clone RP11-333B8 map 3,... 46 3.4 1
(AC016391) Homo sapiens chromosome 2 clone RP11-30J9 map 2, ... 46 3.4 1
(EJ141743) 1092343658010 Global-Ocean-Sampling_GS-27-01-01-1... 46 3.4 1
(AU074667) Dictyostelium discoideum slug cDNA, clone SSL484. 46 3.4 1
(BJ375844) Dictyostelium discoideum cDNA clone:ddc20a07, 3' ... 46 3.4 1
(BJ371733) Dictyostelium discoideum cDNA clone:ddc1c10, 3' e... 46 3.4 1
(BJ346194) Dictyostelium discoideum cDNA clone:dda30l06, 3' ... 46 3.4 1
(BJ344582) Dictyostelium discoideum cDNA clone:dda19f22, 3' ... 46 3.4 1
(FG366881) CBHF4135.rev CBHF Trichoderma virens strain Gv29-... 46 3.4 1
(FF989021) CBWU106261.g1 Yutaka Satou unpublished cDNA libra... 46 3.4 1
(FF923507) CBWU63331.g1 Yutaka Satou unpublished cDNA librar... 46 3.4 1
(FF872664) CBWU16124.g1 Yutaka Satou unpublished cDNA librar... 46 3.4 1
(FF850148) CBWU2080.g1 Yutaka Satou unpublished cDNA library... 46 3.4 1
(AV895296) Ciona intestinalis cDNA, clone:rciad41j12, 3' end... 46 3.4 1
(CP000821) Shewanella sediminis HAW-EB3, complete genome. 46 3.4 1
(BJ437014) Dictyostelium discoideum cDNA clone:ddv32m23, 3' ... 40 3.4 2
(CL868554) EY12330 Drosophila melanogaster P{EPgy2} P elemen... 44 4.2 2
(AE002130) Ureaplasma parvum serovar 3 str. ATCC 700970 sect... 38 5.1 4
(AY160095) Dictyostelium discoideum nucleotide exchange fact... 40 5.6 3
(AC214203) Macaca mulatta BAC CH250-225D7 (Children's Hospi... 42 5.6 5
(FK542635) 454GmaGlobSeed277267 Soybean Seeds Containing Glo... 40 7.7 2
(EB202963) PEG002-C-000808-301 Normalized Pedal-Pleural Gang... 38 7.8 2
(FK649952) 454GmaGlobSeed384584 Soybean Seeds Containing Glo... 40 8.4 2
(EK167764) 1095458060493 Global-Ocean-Sampling_GS-31-01-01-1... 34 8.6 2

>(U53884) Dictyostelium discoideum aimless RasGEF (aleA) mRNA,
complete cds.
Length = 2035

Score = 1197 bits (604), Expect = 0.0
Identities = 604/604 (100%)
Strand = Plus / Plus


Query: 1 gagtatagtaaagaggagagacaatcaaagataacggaacgagaggaactactatttcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gagtatagtaaagaggagagacaatcaaagataacggaacgagaggaactactatttcaa 661


Query: 61 atggatttattggaggatgaagacgaagatgacggagtcaacatatgggatgaaccaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 atggatttattggaggatgaagacgaagatgacggagtcaacatatgggatgaaccaaca 721


Query: 121 gagaatatcatcacagagaaagtacacaccacagaatacgatataaataaaagcaaagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gagaatatcatcacagagaaagtacacaccacagaatacgatataaataaaagcaaagag 781


Query: 181 aataaagatgatcaagacgatgaagtggttaaatttgcatcattgaataaattggtggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 aataaagatgatcaagacgatgaagtggttaaatttgcatcattgaataaattggtggaa 841


Query: 241 catttaacacacgactcaaagcatgatttacaattcttaaaaacctttttaatgacctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 catttaacacacgactcaaagcatgatttacaattcttaaaaacctttttaatgacctat 901


Query: 301 caatcgttttgcacaccagagaagttgatgtcaaaactccaacaacgttacaactgtcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 caatcgttttgcacaccagagaagttgatgtcaaaactccaacaacgttacaactgtcca 961


Query: 361 tcgggtcatgacgagatggccactagaaacatccaaattagggtcatcaatgtgttgaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 tcgggtcatgacgagatggccactagaaacatccaaattagggtcatcaatgtgttgaaa 1021


Query: 421 ggttgggtggacaattattactcggatttcgatgataaattaattgcaatgttacgtaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 ggttgggtggacaattattactcggatttcgatgataaattaattgcaatgttacgtaca 1081


Query: 481 ttcatcgaccaaattcaaattaaattccccgcacctgcaagtgccgtcaataaatcccta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 ttcatcgaccaaattcaaattaaattccccgcacctgcaagtgccgtcaataaatcccta 1141


Query: 541 acaaagatggtggagaaactctcaccagtgaacgatagcaaacacattttcaatgagaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 acaaagatggtggagaaactctcaccagtgaacgatagcaaacacattttcaatgagaaa 1201


Query: 601 acac 604
||||
Sbjct: 1202 acac 1205

Score = 997 bits (503), Expect(2) = 0.0
Identities = 503/503 (100%)
Strand = Plus / Plus


Query: 615 cgaatttgaaatctatagaaacattaaaccacccgaactcttaaatcaatcttggaataa 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1297 cgaatttgaaatctatagaaacattaaaccacccgaactcttaaatcaatcttggaataa 1356


Query: 675 aacaaaactaaaatcacgtgctccaaacgttttaaagatgatcgatcgtttcaactccgt 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1357 aacaaaactaaaatcacgtgctccaaacgttttaaagatgatcgatcgtttcaactccgt 1416


Query: 735 ttcaatgtgggtggccacaatgatcattcaaaccacaaaagttaaagcacgtgctcgtat 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1417 ttcaatgtgggtggccacaatgatcattcaaaccacaaaagttaaagcacgtgctcgtat 1476


Query: 795 gatgactcgtttcataaagatcgcagatcatttgaaaaatttaaataattacaattccct 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1477 gatgactcgtttcataaagatcgcagatcatttgaaaaatttaaataattacaattccct 1536


Query: 855 tatggcaatcatcgctggtcttaacttttcctcggtttatcgtctaaagtatactcgtga 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1537 tatggcaatcatcgctggtcttaacttttcctcggtttatcgtctaaagtatactcgtga 1596


Query: 915 agagttatccgctcaaactatgcgtacctattccgatttagaaaagattatgaactctga 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1597 agagttatccgctcaaactatgcgtacctattccgatttagaaaagattatgaactctga 1656


Query: 975 aggttcctttaaaacctacagaactcgtcttcaaaatgttcctccaatgttaccttattt 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1657 aggttcctttaaaacctacagaactcgtcttcaaaatgttcctccaatgttaccttattt 1716


Query: 1035 gggtgttcatctaaccgatctcacttttatcgatgaaaatccaaataatttcgtcactga 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1717 gggtgttcatctaaccgatctcacttttatcgatgaaaatccaaataatttcgtcactga 1776


Query: 1095 cgttggtggtaaacaggttagtc 1117
|||||||||||||||||||||||
Sbjct: 1777 cgttggtggtaaacaggttagtc 1799

Score = 444 bits (224), Expect(2) = 0.0
Identities = 224/224 (100%)
Strand = Plus / Plus


Query: 1118 ctaatcaatttcacaaagagaaccctagtttttaaaatcatctctttgattcaagaaact 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1799 ctaatcaatttcacaaagagaaccctagtttttaaaatcatctctttgattcaagaaact 1858


Query: 1178 caagtcgtaccttacaatcttcaaccagttcatcaaattcaagagtttttattaaatatt 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1859 caagtcgtaccttacaatcttcaaccagttcatcaaattcaagagtttttattaaatatt 1918


Query: 1238 agaagtgatctcaaagctcatactctcgatcaatatcaacaagaattatatagagaatca 1297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1919 agaagtgatctcaaagctcatactctcgatcaatatcaacaagaattatatagagaatca 1978


Query: 1298 cttaaaagagaaccaaagaaagctcaaagatctgatgttcttta 1341
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1979 cttaaaagagaaccaaagaaagctcaaagatctgatgttcttta 2022

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,499,391,855
Number of extensions: 87357209
Number of successful extensions: 7072445
Number of sequences better than 10.0: 53
Length of query: 1341
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1317
Effective length of database: 97,308,875,965
Effective search space: 128155789645905
Effective search space used: 128155789645905
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.28
Homology vs Protein
Query= Contig-U10833-1 (Contig-U10833-1Q) /CSM_Contig/Contig-U10833-1Q.Seq.d
(1341 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

U53884_1(U53884|pid:none) Dictyostelium discoideum aimless RasGE... 684 0.0
AY160090_1(AY160090|pid:none) Dictyostelium discoideum nucleotid... 684 0.0
AY160098_1(AY160098|pid:none) Dictyostelium discoideum nucleotid... 251 2e-73
AY160099_1(AY160099|pid:none) Dictyostelium discoideum nucleotid... 252 2e-73
AC115592_17(AC115592|pid:none) Dictyostelium discoideum chromoso... 205 2e-55
AC115682_8(AC115682|pid:none) Dictyostelium discoideum chromosom... 194 7e-53
AY160100_1(AY160100|pid:none) Dictyostelium discoideum nucleotid... 169 1e-47
AF474377_1(AF474377|pid:none) Dictyostelium discoideum Ras GTP e... 169 1e-47
AC116987_20(AC116987|pid:none) Dictyostelium discoideum chromoso... 177 2e-46
AY160105_1(AY160105|pid:none) Dictyostelium discoideum nucleotid... 179 3e-46
AM920436_178(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 147 1e-41
CR382130_894(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 152 9e-41
CU633900_651(CU633900|pid:none) Podospora anserina genomic DNA c... 142 1e-39
AC117082_5(AC117082|pid:none) Dictyostelium discoideum chromosom... 150 2e-39
AP007162_207(AP007162|pid:none) Aspergillus oryzae RIB40 genomic... 139 2e-39
BT015294_1(BT015294|pid:none) Drosophila melanogaster GH01796 fu... 147 1e-38
(P26675) RecName: Full=Protein son of sevenless; &A41216(A41216... 147 1e-38
M83931_1(M83931|pid:none) Drosophila melanogaster son of sevenle... 147 1e-38
(Q02384) RecName: Full=Son of sevenless homolog 2; Shor... 148 3e-38
S25714(S25714) son-of-sevenless-2 protein - mouse (fragment) &Z... 148 3e-38
BC143367_1(BC143367|pid:none) Homo sapiens son of sevenless homo... 147 6e-38
AB209277_1(AB209277|pid:none) Homo sapiens mRNA for son of seven... 147 6e-38
S25716(S25716;S21391) Ras guanine nucleotide exchange factor son... 146 2e-37
(Q62245) RecName: Full=Son of sevenless homolog 1; Shor... 146 2e-37
AY902349_1(AY902349|pid:none) Mus musculus strain CAST/EiJ son o... 146 2e-37
AK140310_1(AK140310|pid:none) Mus musculus adult male adrenal gl... 146 2e-37
(Q07889) RecName: Full=Son of sevenless homolog 1; Shor... 145 4e-37
A37488(A37488)Ras guanine nucleotide exchange factor son-of-seve... 145 4e-37
AC019171_1(AC019171|pid:none) Homo sapiens BAC clone RP11-173C1 ... 145 4e-37
AF441482_1(AF441482|pid:none) Homo sapiens alternate SOS1 (SOS1)... 145 4e-37
AB209140_1(AB209140|pid:none) Homo sapiens mRNA for son of seven... 145 4e-37
AE017356_184(AE017356|pid:none) Cryptococcus neoformans var. neo... 153 1e-35
AF094679_1(AF094679|pid:none) Mus musculus Sos1 gene, exon and p... 134 1e-33
AM270066_3(AM270066|pid:none) Aspergillus niger contig An04c0050... 129 7e-33
AM920437_1749(AM920437|pid:none) Penicillium chrysogenum Wiscons... 126 7e-33
AB385192_1(AB385192|pid:none) Synthetic construct DNA, clone: pF... 127 1e-31
A75965_1(A75965|pid:none) Sequence 1 from Patent WO9321314. 127 1e-31
AY160104_1(AY160104|pid:none) Dictyostelium discoideum nucleotid... 131 1e-31
(A2CEA7) RecName: Full=Ras-specific guanine nucleotide-releasing... 125 2e-31
AP007157_830(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 123 2e-31
X59868_1(X59868|pid:none) M.musculus CDC25Mm mRNA for guanine nu... 125 2e-31
AK135070_1(AK135070|pid:none) Mus musculus adult male olfactory ... 125 2e-31
BC091317_1(BC091317|pid:none) Rattus norvegicus RAS protein-spec... 124 3e-31
AX027844_1(AX027844|pid:none) Sequence 1 from Patent WO0040718. 123 8e-31
(P70392) RecName: Full=Ras-specific guanine nucleotide-releasing... 123 4e-30
CP000502_107(CP000502|pid:none) Pichia stipitis CBS 6054 chromos... 117 5e-30
(Q99JE4) RecName: Full=Ras-specific guanine nucleotide-releasing... 123 5e-30
AF023130_1(AF023130|pid:none) Homo sapiens Ras-GRF2 mRNA, partia... 124 2e-29
(O14827) RecName: Full=Ras-specific guanine nucleotide-releasing... 124 2e-29
CR858031_1(CR858031|pid:none) Pongo abelii mRNA; cDNA DKFZp459J1... 124 2e-29
CQ834804_1(CQ834804|pid:none) Sequence 675 from Patent WO2004058... 123 2e-29
AF094691_1(AF094691|pid:none) Mus musculus guanine nucleotide re... 119 2e-29
AF275723_1(AF275723|pid:none) Dictyostelium discoideum Ras guani... 130 8e-29
FM992690_366(FM992690|pid:none) Candida dubliniensis CD36 chromo... 111 1e-28
(P43069) RecName: Full=Cell division control protein 25; &GN103... 114 2e-28
AF109312_1(AF109312|pid:none) Mus musculus guanine nucleotide re... 117 2e-28
BC166138_1(BC166138|pid:none) Xenopus tropicalis Rap guanine nuc... 128 4e-28
AY160095_1(AY160095|pid:none) Dictyostelium discoideum nucleotid... 107 3e-27
AC116986_28(AC116986|pid:none) Dictyostelium discoideum chromoso... 124 4e-27
AK147696_1(AK147696|pid:none) Mus musculus cDNA, RIKEN full-leng... 124 6e-27
JC7736(JC7736)C3G protein, long type - mouse 124 6e-27
BC129881_1(BC129881|pid:none) Mus musculus Rap guanine nucleotid... 124 6e-27
AK077034_1(AK077034|pid:none) Mus musculus adult male testis cDN... 124 6e-27
AK147468_1(AK147468|pid:none) Mus musculus adult male brain UNDE... 124 6e-27
AB385202_1(AB385202|pid:none) Synthetic construct DNA, clone: pF... 124 1e-26
BC041710_1(BC041710|pid:none) Homo sapiens Rap guanine nucleotid... 124 1e-26
AL160276_3(AL160276|pid:none) Human DNA sequence from clone RP11... 124 1e-26
FN357308_23(FN357308|pid:none) Schistosoma mansoni genome sequen... 122 2e-26
A75971_1(A75971|pid:none) Sequence 7 from Patent WO9321314. 108 4e-26
BC131870_1(BC131870|pid:none) Danio rerio zgc:158274, mRNA (cDNA... 103 1e-25
AY254473_1(AY254473|pid:none) Dictyostelium discoideum nucleotid... 117 7e-25
L20686_1(L20686|pid:none) Homo sapiens guanine nucleotide releas... 103 1e-24
(Q5ZJK0) RecName: Full=Ras-specific guanine nucleotide-releasing... 115 5e-24
AF312924_1(AF312924|pid:none) Mus musculus Ral-A exchange factor... 114 6e-24
(Q4R7W3) RecName: Full=Ras-specific guanine nucleotide-releasing... 114 6e-24
AK018622_1(AK018622|pid:none) Mus musculus adult male cecum cDNA... 114 6e-24
AK036803_1(AK036803|pid:none) Mus musculus adult female vagina c... 114 6e-24
AK033549_1(AK033549|pid:none) Mus musculus adult male colon cDNA... 114 6e-24
AK001106_1(AK001106|pid:none) Homo sapiens cDNA FLJ10244 fis, cl... 114 6e-24
AK029049_1(AK029049|pid:none) Mus musculus 10 days neonate skin ... 114 6e-24
(Q86X27) RecName: Full=Ras-specific guanine nucleotide-releasing... 114 6e-24
AK169368_1(AK169368|pid:none) Mus musculus 17 days pregnant adul... 114 6e-24
(Q9ERD6) RecName: Full=Ras-specific guanine nucleotide-releasing... 114 6e-24
BC118719_1(BC118719|pid:none) Xenopus tropicalis hypothetical pr... 113 1e-23
(P04821) RecName: Full=Cell division control protein 25; &GN103... 107 2e-23
M26647_1(M26647|pid:none) Saccharomyces cerevisiae SDC25 gene, c... 112 2e-23
AE016817_362(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 100 3e-23
AC024755_7(AC024755|pid:none) Caenorhabditis elegans cosmid Y34B... 112 3e-23
AC024755_6(AC024755|pid:none) Caenorhabditis elegans cosmid Y34B... 112 3e-23
GN110865_1(GN110865|pid:none) Sequence 15646 from Patent WO20090... 112 4e-23
(P14771) RecName: Full=Guanine nucleotide exchange factor SDC25; 112 4e-23
GN103733_1(GN103733|pid:none) Sequence 8514 from Patent WO200903... 112 4e-23
(Q9USU1) RecName: Full=Ras guanine nucleotide exchange factor ef... 112 4e-23
CU928180_398(CU928180|pid:none) Kluyveromyces thermotolerans str... 101 7e-23
S14177(S14177;S12942;PS0040)SCD25 protein (version 1) - yeast (S... 111 7e-23
BC072656_1(BC072656|pid:none) Mus musculus Ral GEF with PH domai... 110 1e-22
(P0C643) RecName: Full=RAS guanyl-releasing protein 2; AltName: ... 100 1e-22
AF081193_1(AF081193|pid:none) Mus musculus calcium and DAG-regul... 100 2e-22
A75969_1(A75969|pid:none) Sequence 5 from Patent WO9321314. 97 2e-22
AL160169_2(AL160169|pid:none) Human DNA sequence from clone RP11... 109 2e-22
AL160169_5(AL160169|pid:none) Human DNA sequence from clone RP11... 109 2e-22
AL845277_5(AL845277|pid:none) Mouse DNA sequence from clone RP23... 109 2e-22
(Q9NZ16) RecName: Full=Ras-specific guanine nucleotide-releasing... 109 2e-22
AK299149_1(AK299149|pid:none) Homo sapiens cDNA FLJ61342 complet... 109 3e-22
AF043722_1(AF043722|pid:none) Homo sapiens guanine exchange fact... 100 3e-22
BC110306_1(BC110306|pid:none) Homo sapiens RAS guanyl releasing ... 100 3e-22
AK092882_1(AK092882|pid:none) Homo sapiens cDNA FLJ35563 fis, cl... 100 3e-22
AY149915_1(AY149915|pid:none) Ustilago maydis guanyl nucleotide ... 86 4e-22
BC032372_1(BC032372|pid:none) Homo sapiens Ral GEF with PH domai... 108 4e-22
(A6N9I4) RecName: Full=RAS guanyl-releasing protein 2; AltName: ... 99 6e-22
AL031966_1(AL031966|pid:none) S.pombe chromosome III cosmid c1442. 86 7e-22
(Q9QUG9) RecName: Full=RAS guanyl-releasing protein 2; AltName: ... 100 9e-22
BC055185_1(BC055185|pid:none) Danio rerio Ral-A exchange factor ... 106 2e-21
CU638743_770(CU638743|pid:none) Podospora anserina genomic DNA c... 105 3e-21
(B0UXH6) RecName: Full=Ras-specific guanine nucleotide-releasing... 105 4e-21
BC146736_1(BC146736|pid:none) Danio rerio Ral GEF with PH domain... 105 4e-21
CR382124_382(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 105 5e-21
AC006692_9(AC006692|pid:none) Caenorhabditis elegans cosmid T28F... 96 6e-21
AF251308_1(AF251308|pid:none) Caenorhabditis elegans guanine nuc... 96 6e-21
AF321469_1(AF321469|pid:none) Yarrowia lipolytica Ras guanine-nu... 85 8e-21
AE014298_984(AE014298|pid:none) Drosophila melanogaster chromoso... 104 8e-21
AE014298_987(AE014298|pid:none) Drosophila melanogaster chromoso... 104 8e-21
AE014298_985(AE014298|pid:none) Drosophila melanogaster chromoso... 104 8e-21
AE014298_983(AE014298|pid:none) Drosophila melanogaster chromoso... 104 8e-21
AE013599_2480(AE013599|pid:none) Drosophila melanogaster chromos... 104 8e-21
AF053358_1(AF053358|pid:none) Drosophila melanogaster guanine nu... 104 8e-21
(O77086) RecName: Full=Guanine nucleotide-releasing factor 2; Al... 104 8e-21
BT025818_1(BT025818|pid:none) Drosophila melanogaster IP03271 fu... 104 8e-21
AE017353_159(AE017353|pid:none) Cryptococcus neoformans var. neo... 103 1e-20
AL845277_3(AL845277|pid:none) Mouse DNA sequence from clone RP23... 102 2e-20
BT010019_1(BT010019|pid:none) Drosophila melanogaster RE10624 fu... 102 2e-20
AK129123_1(AK129123|pid:none) Mus musculus mRNA for mKIAA0351 pr... 102 2e-20
AL845277_2(AL845277|pid:none) Mouse DNA sequence from clone RP23... 100 9e-20
(Q32N25) RecName: Full=RAS guanyl-releasing protein 2-A; &BC108... 86 1e-19
BT044818_1(BT044818|pid:none) Salmo salar clone ssal-rgf-504-236... 91 4e-19
AL669999_10(AL669999|pid:none) Neurospora crassa DNA linkage gro... 98 6e-19
D87467_1(D87467|pid:none) Homo sapiens mRNA for KIAA0277 gene, p... 98 6e-19
BC124563_1(BC124563|pid:none) Xenopus tropicalis hypothetical pr... 97 1e-18
AK122234_1(AK122234|pid:none) Mus musculus mRNA for mKIAA0277 pr... 97 1e-18
AK030016_1(AK030016|pid:none) Mus musculus adult male testis cDN... 97 1e-18
AK083591_1(AK083591|pid:none) Mus musculus 9 days embryo whole b... 97 1e-18
(P83900) RecName: Full=Rap guanine nucleotide exchange factor 5;... 96 2e-18
AL929533_2(AL929533|pid:none) Zebrafish DNA sequence from clone ... 96 2e-18
BC055678_1(BC055678|pid:none) Danio rerio RasGEF domain family, ... 96 2e-18
BC040183_1(BC040183|pid:none) Homo sapiens Rap guanine nucleotid... 96 3e-18
BC138284_1(BC138284|pid:none) Mus musculus RasGEF domain family,... 96 3e-18
BC145232_1(BC145232|pid:none) Mus musculus RasGEF domain family,... 96 3e-18
AY160093_1(AY160093|pid:none) Dictyostelium discoideum nucleotid... 96 4e-18
FN357914_21(FN357914|pid:none) Schistosoma mansoni genome sequen... 96 4e-18
CS416351_1(CS416351|pid:none) Sequence 3 from Patent WO200609470... 95 5e-18
AK296340_1(AK296340|pid:none) Homo sapiens cDNA FLJ58368 complet... 95 5e-18
AK304278_1(AK304278|pid:none) Homo sapiens cDNA FLJ51189 complet... 95 5e-18
BC024004_1(BC024004|pid:none) Homo sapiens Rap guanine nucleotid... 95 5e-18
AK316014_1(AK316014|pid:none) Homo sapiens cDNA, FLJ78913 comple... 95 5e-18
AB075513_1(AB075513|pid:none) Homo sapiens neuroblastoma cDNA, c... 95 5e-18
(Q8WZA2) RecName: Full=Rap guanine nucleotide exchange factor 4;... 95 5e-18
AK220281_1(AK220281|pid:none) Mus musculus mRNA for mKIAA4040 pr... 95 7e-18
AC074344_1(AC074344|pid:none) Homo sapiens BAC clone RP11-138A23... 95 7e-18
AK294459_1(AK294459|pid:none) Homo sapiens cDNA FLJ61094 partial... 95 7e-18
(Q9EQZ6) RecName: Full=Rap guanine nucleotide exchange factor 4;... 95 7e-18
AB445011_1(AB445011|pid:none) Mus musculus cAMP-GEFII mRNA for c... 95 7e-18
AB037668_1(AB037668|pid:none) Mus musculus Epac2 mRNA for cAMP-G... 95 7e-18
AB002311_1(AB002311|pid:none) Homo sapiens mRNA for KIAA0313 gen... 95 7e-18
AJ720845_1(AJ720845|pid:none) Gallus gallus mRNA for hypothetica... 94 9e-18
AK029995_1(AK029995|pid:none) Mus musculus adult male testis cDN... 94 9e-18
BX004769_1(BX004769|pid:none) Zebrafish DNA sequence from clone ... 94 9e-18
BT020843_1(BT020843|pid:none) Bos taurus RasGEF domain family, m... 93 2e-17
(Q28EC1) RecName: Full=Ras-GEF domain-containing family member 1... 92 3e-17
CS416355_1(CS416355|pid:none) Sequence 7 from Patent WO2006094703. 92 4e-17
BC017728_1(BC017728|pid:none) Homo sapiens Rap guanine nucleotid... 92 4e-17
AK125545_1(AK125545|pid:none) Homo sapiens cDNA FLJ43557 fis, cl... 92 4e-17
EF636666_1(EF636666|pid:none) Canis lupus familiaris exchange pr... 92 4e-17
AK034265_1(AK034265|pid:none) Mus musculus adult male diencephal... 92 4e-17
BC020311_1(BC020311|pid:none) Mus musculus Rap guanine nucleotid... 92 4e-17
AK142594_1(AK142594|pid:none) Mus musculus 10 days lactation, ad... 92 4e-17
(O95398) RecName: Full=Rap guanine nucleotide exchange factor 3;... 92 4e-17
BC092404_1(BC092404|pid:none) Homo sapiens Rap guanine nucleotid... 92 4e-17
AB384012_1(AB384012|pid:none) Synthetic construct DNA, clone: pF... 92 6e-17
BC155690_1(BC155690|pid:none) Xenopus tropicalis hypothetical pr... 92 6e-17
(Q8IV61) RecName: Full=Ras guanyl-releasing protein 3; AltName: ... 92 6e-17
AK173041_1(AK173041|pid:none) Mus musculus mRNA for mKIAA0846 pr... 92 6e-17
AM269957_6(AM269957|pid:none) Aspergillus niger contig An01c0100... 91 7e-17
AY160092_1(AY160092|pid:none) Dictyostelium discoideum nucleotid... 91 9e-17
AC117080_21(AC117080|pid:none) Dictyostelium discoideum chromoso... 80 1e-16
AY160103_1(AY160103|pid:none) Dictyostelium discoideum nucleotid... 80 1e-16
AY582133_1(AY582133|pid:none) Xenopus laevis Rap1 guanine-nucleo... 91 1e-16
BC020532_1(BC020532|pid:none) Mus musculus Rap guanine nucleotid... 91 1e-16
(Q8VCC8) RecName: Full=Rap guanine nucleotide exchange factor 3;... 91 1e-16
BC119832_1(BC119832|pid:none) Bos taurus RAS guanyl releasing pr... 90 2e-16
(A0JM95) RecName: Full=Ras-GEF domain-containing family member 1... 90 2e-16
(Q9D300) RecName: Full=Ras-GEF domain-containing family member 1... 90 2e-16
AK292983_1(AK292983|pid:none) Homo sapiens cDNA FLJ77595 complet... 90 2e-16
AK316526_1(AK316526|pid:none) Homo sapiens cDNA, FLJ79425 comple... 89 3e-16
(Q5RC04) RecName: Full=Ras-GEF domain-containing family member 1B; 89 3e-16
(A4IFE4) RecName: Full=Ras-GEF domain-containing family member 1... 89 3e-16
CR858478_1(CR858478|pid:none) Pongo abelii mRNA; cDNA DKFZp469N2... 89 3e-16
Z70752_2(Z70752|pid:none) Caenorhabditis elegans Cosmid F25B3, c... 89 3e-16
AF478567_1(AF478567|pid:none) Homo sapiens PDZ domain-containing... 89 4e-16
AK302640_1(AK302640|pid:none) Homo sapiens cDNA FLJ53249 complet... 89 4e-16
(Q9Z1C7) RecName: Full=Rap guanine nucleotide exchange factor 4;... 89 4e-16
BC144627_1(BC144627|pid:none) Homo sapiens Rap guanine nucleotid... 89 4e-16
AX460077_1(AX460077|pid:none) Sequence 1 from Patent WO0218577. 89 4e-16
AF394782_1(AF394782|pid:none) Homo sapiens rap guanine nucleotid... 89 4e-16
BC121003_1(BC121003|pid:none) Homo sapiens RasGEF domain family,... 89 4e-16
T21321(T21321)hypothetical protein F25B3.3 - Caenorhabditis eleg... 89 5e-16
AK295179_1(AK295179|pid:none) Homo sapiens cDNA FLJ50518 complet... 89 5e-16
AJ720654_1(AJ720654|pid:none) Gallus gallus mRNA for hypothetica... 88 6e-16
(Q0VAM2) RecName: Full=Ras-GEF domain-containing family member 1... 88 8e-16
BC125684_1(BC125684|pid:none) Xenopus tropicalis Rap guanine nuc... 88 8e-16
AB154824_1(AB154824|pid:none) Mus musculus mRNA for RasGRP3, com... 87 1e-15
BC036802_1(BC036802|pid:none) Homo sapiens RasGEF domain family,... 87 1e-15
(Q8N431) RecName: Full=Ras-GEF domain-containing family member 1... 87 1e-15
AL590422_1(AL590422|pid:none) Human DNA sequence from clone RP11... 87 1e-15
AF186798_1(AF186798|pid:none) Homo sapiens RalGDS-like (RGL) gen... 87 1e-15
AF186798_2(AF186798|pid:none) Homo sapiens RalGDS-like (RGL) gen... 87 1e-15
AK143331_1(AK143331|pid:none) Mus musculus 2 days pregnant adult... 87 2e-15
BC025553_1(BC025553|pid:none) Mus musculus Rap guanine nucleotid... 87 2e-15
AL607091_5(AL607091|pid:none) Mouse DNA sequence from clone RP23... 87 2e-15
AL607091_4(AL607091|pid:none) Mouse DNA sequence from clone RP23... 87 2e-15
AL596127_16(AL596127|pid:none) Mouse DNA sequence from clone RP2... 87 2e-15
BC022548_1(BC022548|pid:none) Homo sapiens RasGEF domain family,... 86 2e-15
FN357603_14(FN357603|pid:none) Schistosoma mansoni genome sequen... 86 2e-15
AK095136_1(AK095136|pid:none) Homo sapiens cDNA FLJ37817 fis, cl... 86 2e-15
(Q8JZL7) RecName: Full=Ras-GEF domain-containing family member 1... 86 2e-15
AF170796_1(AF170796|pid:none) Caenorhabditis elegans RA-GEF (ra-... 84 5e-15
AF308449_1(AF308449|pid:none) Caenorhabditis elegans PXF isoform... 84 5e-15
(Q95KH6) RecName: Full=Ras-GEF domain-containing family member 1... 85 5e-15
AK144218_1(AK144218|pid:none) Mus musculus CRL-2116 JC cDNA, RIK... 85 5e-15
(A4IJ06) RecName: Full=RAS guanyl-releasing protein 1; &BC13622... 84 9e-15
AY810144_1(AY810144|pid:none) Schistosoma japonicum SJCHGC07188 ... 84 1e-14
BC074379_1(BC074379|pid:none) Xenopus laevis MGC84301 protein, m... 83 2e-14
(Q6DBW1) RecName: Full=Ras-GEF domain-containing family member 1... 83 3e-14
(Q6NTL4) RecName: Full=RAS guanyl-releasing protein 1; &BC06894... 82 3e-14
AE017341_238(AE017341|pid:none) Cryptococcus neoformans var. neo... 82 4e-14
AK304293_1(AK304293|pid:none) Homo sapiens cDNA FLJ52394 complet... 82 4e-14
CR380950_274(CR380950|pid:none) Candida glabrata strain CBS138 c... 74 7e-14
AK314091_1(AK314091|pid:none) Homo sapiens cDNA, FLJ94771, highl... 81 7e-14
(Q9UI94) RecName: Full=RAS guanyl-releasing protein 1; AltName: ... 81 7e-14
AE013599_215(AE013599|pid:none) Drosophila melanogaster chromoso... 81 7e-14
AY858556_1(AY858556|pid:none) Homo sapiens RAS guanyl releasing ... 81 7e-14
AE013599_216(AE013599|pid:none) Drosophila melanogaster chromoso... 81 7e-14
AY954625_1(AY954625|pid:none) Homo sapiens Ras guanyl releasing ... 81 7e-14
EU362913_1(EU362913|pid:none) Drosophila melanogaster dizzy isof... 80 9e-14
AE014134_1119(AE014134|pid:none) Drosophila melanogaster chromos... 80 9e-14
EU362915_1(EU362915|pid:none) Drosophila melanogaster dizzy isof... 80 9e-14
BC121004_1(BC121004|pid:none) Homo sapiens RasGEF domain family,... 81 1e-13
AF081197_1(AF081197|pid:none) Homo sapiens calcium and DAG-regul... 81 1e-13
AF081195_1(AF081195|pid:none) Homo sapiens calcium and DAG-regul... 81 1e-13
BX640472_3(BX640472|pid:none) Zebrafish DNA sequence from clone ... 81 1e-13
AF060819_1(AF060819|pid:none) Rattus norvegicus ras guanyl relea... 79 3e-13
(Q9R1K8) RecName: Full=RAS guanyl-releasing protein 1; AltName: ... 79 3e-13
CR382137_925(CR382137|pid:none) Debaryomyces hansenii strain CBS... 79 4e-13
AF202722_1(AF202722|pid:none) Danio rerio ras-associated protein... 79 4e-13
AK141524_1(AK141524|pid:none) Mus musculus adult male hippocampu... 79 5e-13
BC040275_1(BC040275|pid:none) Homo sapiens Ras protein-specific ... 78 6e-13
BC149035_1(BC149035|pid:none) Bos taurus ral guanine nucleotide ... 78 8e-13
AC093747_1(AC093747|pid:none) Homo sapiens BAC clone RP11-29L8 f... 78 8e-13
(Q8R5I4) RecName: Full=RAS guanyl-releasing protein 4; &AF46526... 77 1e-12
AB208848_1(AB208848|pid:none) Homo sapiens mRNA for Ras activato... 77 1e-12
AF027169_1(AF027169|pid:none) Homo sapiens Ral guanine nucleotid... 77 1e-12
AB037729_1(AB037729|pid:none) Homo sapiens mRNA for KIAA1308 pro... 77 1e-12
AK056462_1(AK056462|pid:none) Homo sapiens cDNA FLJ31900 fis, cl... 77 1e-12
AK074114_1(AK074114|pid:none) Homo sapiens mRNA for FLJ00185 pro... 77 1e-12
AK301470_1(AK301470|pid:none) Homo sapiens cDNA FLJ53221 complet... 77 1e-12
AK127524_1(AK127524|pid:none) Homo sapiens cDNA FLJ45617 fis, cl... 77 1e-12
AF465264_1(AF465264|pid:none) Rattus norvegicus ras guanine nucl... 77 1e-12
AK293997_1(AK293997|pid:none) Homo sapiens cDNA FLJ55326 complet... 77 1e-12
AK303625_1(AK303625|pid:none) Homo sapiens cDNA FLJ50337 complet... 77 1e-12
FM992695_606(FM992695|pid:none) Candida dubliniensis CD36 chromo... 77 2e-12
AY048119_1(AY048119|pid:none) Homo sapiens RAS guanyl releasing ... 76 2e-12
AX556884_1(AX556884|pid:none) Sequence 1 from Patent WO0240656. 76 2e-12
FJ768681_1(FJ768681|pid:none) Homo sapiens RAS guanyl releasing ... 76 2e-12
AY048121_1(AY048121|pid:none) Homo sapiens RAS guanyl releasing ... 76 2e-12
AK165106_1(AK165106|pid:none) Mus musculus 2 days pregnant adult... 76 2e-12
AK162667_1(AK162667|pid:none) Mus musculus adult male bone cDNA,... 76 2e-12
(Q8TDF6) RecName: Full=RAS guanyl-releasing protein 4; &AF44843... 76 2e-12
(Q8BTM9) RecName: Full=RAS guanyl-releasing protein 4; &AK08928... 76 2e-12
AY040628_1(AY040628|pid:none) Mus musculus RAS guanyl releasing ... 76 2e-12
BX908798_1363(BX908798|pid:none) Parachlamydia-related symbiont ... 76 3e-12
(Q1LZ97) RecName: Full=RAS guanyl-releasing protein 4; &BC11613... 76 3e-12
AK295616_1(AK295616|pid:none) Homo sapiens cDNA FLJ61275 complet... 75 4e-12
AK159754_1(AK159754|pid:none) Mus musculus osteoclast-like cell ... 75 5e-12
AK149644_1(AK149644|pid:none) Mus musculus bone marrow macrophag... 75 5e-12
AL772249_10(AL772249|pid:none) Mouse DNA sequence from clone RP2... 75 5e-12
(Q03385) RecName: Full=Ral guanine nucleotide dissociation stimu... 75 5e-12
AK141959_1(AK141959|pid:none) Mus musculus 12 days embryo spinal... 75 5e-12
AL645913_2(AL645913|pid:none) Mouse DNA sequence from clone RP23... 74 9e-12
(Q03386) RecName: Full=Ral guanine nucleotide dissociation stimu... 74 9e-12
AK093160_1(AK093160|pid:none) Homo sapiens cDNA FLJ35841 fis, cl... 74 9e-12
CP000499_444(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 74 9e-12
CR382131_1446(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 74 1e-11
(Q9UHV5) RecName: Full=Rap guanine nucleotide exchange factor-li... 73 2e-11
AK304160_1(AK304160|pid:none) Homo sapiens cDNA FLJ56384 complet... 73 2e-11
AF117946_1(AF117946|pid:none) Homo sapiens Link guanine nucleoti... 73 2e-11
(Q5R9B2) RecName: Full=Rap guanine nucleotide exchange factor-li... 73 2e-11
AK294642_1(AK294642|pid:none) Homo sapiens cDNA FLJ58529 complet... 73 2e-11
CR382123_145(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 72 3e-11
AK169430_1(AK169430|pid:none) Mus musculus 17 days pregnant adul... 72 3e-11
AF032126_1(AF032126|pid:none) Drosophila melanogaster ral guanin... 72 5e-11
AE014296_2462(AE014296|pid:none) Drosophila melanogaster chromos... 72 5e-11
AE014296_2459(AE014296|pid:none) Drosophila melanogaster chromos... 72 5e-11
(Q6FT12) RecName: Full=Guanine nucleotide exchange factor LTE1; ... 72 5e-11
AL590963_1(AL590963|pid:none) Mouse DNA sequence from clone RP23... 72 6e-11
BC080279_1(BC080279|pid:none) Mus musculus Rap guanine nucleotid... 72 6e-11
BC057759_1(BC057759|pid:none) Homo sapiens RasGEF domain family,... 72 6e-11
BX571854_2(BX571854|pid:none) Zebrafish DNA sequence from clone ... 72 6e-11
D21354_1(D21354|pid:none) Saccharomyces cerevisiae gene for puta... 71 1e-10
(P07866) RecName: Full=Guanine nucleotide exchange factor LTE1; ... 71 1e-10
BC143530_1(BC143530|pid:none) Homo sapiens ral guanine nucleotid... 70 1e-10
FM992689_618(FM992689|pid:none) Candida dubliniensis CD36 chromo... 70 1e-10
(Q55EC7) RecName: Full=RasGEF domain-containing serine/threonine... 70 2e-10
CR382138_57(CR382138|pid:none) Debaryomyces hansenii strain CBS7... 70 2e-10
CR861270_1(CR861270|pid:none) Pongo abelii mRNA; cDNA DKFZp459K0... 69 3e-10
AK158756_1(AK158756|pid:none) Mus musculus visual cortex cDNA, R... 69 4e-10
BC161641_1(BC161641|pid:none) Xenopus tropicalis hypothetical pr... 69 4e-10
(Q3UYI5) RecName: Full=Ral guanine nucleotide dissociation stimu... 69 5e-10
AM989988_10(AM989988|pid:none) Zygosaccharomyces rouxii strain C... 68 7e-10
AK295611_1(AK295611|pid:none) Homo sapiens cDNA FLJ50530 complet... 67 1e-09
(Q8MVR1) RecName: Full=Cyclic GMP-binding protein C; EC... 67 2e-09
U42834_3(U42834|pid:none) Caenorhabditis elegans cosmid F28B4, c... 66 2e-09
(Q75BH9) RecName: Full=Guanine nucleotide exchange factor LTE1; ... 66 2e-09
EU919685_1(EU919685|pid:none) Danio rerio phospholipase C epsilo... 66 2e-09
AE014296_3925(AE014296|pid:none) Drosophila melanogaster chromos... 66 2e-09
AM920433_156(AM920433|pid:none) Penicillium chrysogenum Wisconsi... 66 2e-09
AK299029_1(AK299029|pid:none) Homo sapiens cDNA FLJ56134 complet... 66 3e-09
AK302825_1(AK302825|pid:none) Homo sapiens cDNA FLJ56976 complet... 65 4e-09
FJ768679_1(FJ768679|pid:none) Homo sapiens RAS guanyl releasing ... 64 9e-09
AK074082_1(AK074082|pid:none) Homo sapiens mRNA for FLJ00153 pro... 64 9e-09
AK096811_1(AK096811|pid:none) Homo sapiens cDNA FLJ39492 fis, cl... 64 9e-09
CU928168_88(CU928168|pid:none) Kluyveromyces thermotolerans stra... 64 9e-09
DQ246664_3(DQ246664|pid:none) Oncorhynchus mykiss SYPG1 (SYPG1),... 64 2e-08
AE016819_863(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 64 2e-08
AP007151_629(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 63 2e-08
AY365418_10(AY365418|pid:none) Epichloe festucae strain 1035.30 ... 62 5e-08
(Q8K4S1) RecName: Full=1-phosphatidylinositol-4,5-bisphosphate p... 60 1e-07
(Q99P84) RecName: Full=1-phosphatidylinositol-4,5-bisphosphate p... 60 1e-07
BX284747_19(BX284747|pid:none) Neurospora crassa DNA linkage gro... 60 2e-07
CU638744_132(CU638744|pid:none) Podospora anserina genomic DNA c... 60 2e-07
AB040949_1(AB040949|pid:none) Homo sapiens mRNA for KIAA1516 pro... 59 3e-07
AF190642_1(AF190642|pid:none) Homo sapiens phosphoinositide-spec... 59 3e-07
AL139118_1(AL139118|pid:none) Human DNA sequence from clone RP11... 59 3e-07
AL139118_2(AL139118|pid:none) Human DNA sequence from clone RP11... 59 3e-07
(Q9UHV3) RecName: Full=1-phosphatidylinositol-4,5-bisphosphate p... 59 3e-07
AF170071_1(AF170071|pid:none) Homo sapiens phospholipase C epsil... 59 4e-07
FJ768677_1(FJ768677|pid:none) Homo sapiens RAS guanyl releasing ... 59 5e-07
CR380948_48(CR380948|pid:none) Candida glabrata strain CBS138 ch... 58 7e-07
U58746_7(U58746|pid:none) Caenorhabditis elegans cosmid R05G6, c... 57 2e-06
FJ768678_1(FJ768678|pid:none) Homo sapiens RAS guanyl releasing ... 57 2e-06
U82163_1(U82163|pid:none) Oryctolagus cuniculus oncogene rsc mRN... 55 4e-06
AX275027_1(AX275027|pid:none) Sequence 1 from Patent WO0175121. 54 1e-05
(Q8IZJ4) RecName: Full=Ral-GDS-related protein; Short=h... 54 2e-05
BC101108_1(BC101108|pid:none) Homo sapiens ral guanine nucleotid... 53 3e-05
BC101110_1(BC101110|pid:none) Homo sapiens ral guanine nucleotid... 53 3e-05
BC101109_1(BC101109|pid:none) Homo sapiens ral guanine nucleotid... 53 3e-05
AK028308_1(AK028308|pid:none) Mus musculus adult male brain cDNA... 52 4e-05
T29361(T29361)hypothetical protein R05G6.10 - Caenorhabditis ele... 52 6e-05
AF053308_1(AF053308|pid:none) Drosophila affinis putative guanin... 50 2e-04
CR749239_1(CR749239|pid:none) Homo sapiens mRNA; cDNA DKFZp781H1... 38 4e-04
AK131340_1(AK131340|pid:none) Homo sapiens cDNA FLJ16354 fis, cl... 48 0.001
AL160276_4(AL160276|pid:none) Human DNA sequence from clone RP11... 47 0.002
FN357537_13(FN357537|pid:none) Schistosoma mansoni genome sequen... 46 0.003
BC139712_1(BC139712|pid:none) Danio rerio similar to Ral guanine... 45 0.006
AK301205_1(AK301205|pid:none) Homo sapiens cDNA FLJ50071 complet... 44 0.013
AY811708_1(AY811708|pid:none) Schistosoma japonicum SJCHGC07555 ... 42 0.050
AK076810_1(AK076810|pid:none) Mus musculus adult male testis cDN... 42 0.050
AL772249_8(AL772249|pid:none) Mouse DNA sequence from clone RP23... 42 0.065
Z50740_3(Z50740|pid:none) Caenorhabditis elegans Cosmid F31B12, ... 41 0.085
Z50740_4(Z50740|pid:none) Caenorhabditis elegans Cosmid F31B12, ... 41 0.085
T21581(T21581)hypothetical protein F31B12.1 - Caenorhabditis ele... 41 0.085
Z50740_6(Z50740|pid:none) Caenorhabditis elegans Cosmid F31B12, ... 41 0.085
Z50740_1(Z50740|pid:none) Caenorhabditis elegans Cosmid F31B12, ... 41 0.085
AF044576_1(AF044576|pid:none) Caenorhabditis elegans phospholipa... 41 0.085
AK097292_1(AK097292|pid:none) Homo sapiens cDNA FLJ39973 fis, cl... 41 0.11
AJ719758_1(AJ719758|pid:none) Gallus gallus mRNA for hypothetica... 41 0.11
AL845323_3(AL845323|pid:none) Mouse DNA sequence from clone RP23... 41 0.11
AE014186_207(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.42
AE014134_591(AE014134|pid:none) Drosophila melanogaster chromoso... 39 0.42
AK133137_1(AK133137|pid:none) Mus musculus adult male testis cDN... 38 0.72
BC014426_1(BC014426|pid:none) Homo sapiens ral guanine nucleotid... 36 3.6
AE014187_340(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 35 4.7
AE015928_989(AE015928|pid:none) Bacteroides thetaiotaomicron VPI... 35 4.7
AM180355_3692(AM180355|pid:none) Clostridium difficile 630 compl... 35 6.1
(Q89AB2) RecName: Full=Exodeoxyribonuclease V alpha chain; ... 35 6.1
AF533700_1(AF533700|pid:none) Plasmodium falciparum 3D7 normocyt... 35 8.0
CR954201_513(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 35 8.0
AE017261_1245(AE017261|pid:none) Picrophilus torridus DSM 9790, ... 35 8.0
AF411929_1(AF411929|pid:none) Plasmodium falciparum strain FVO n... 35 8.0

>U53884_1(U53884|pid:none) Dictyostelium discoideum aimless RasGEF
(aleA) mRNA, complete cds.
Length = 605

Score = 684 bits (1766), Expect = 0.0
Identities = 354/410 (86%), Positives = 354/410 (86%), Gaps = 27/410 (6%)
Frame = +1

Query: 1 EYSKEERQSKITERXXXXXXXXXXXXXXXXXGVNIWDEPTENIITEKVHTTEYDINKSKE 180
EYSKEERQSKITER GVNIWDEPTENIITEKVHTTEYDINKSKE
Sbjct: 133 EYSKEERQSKITEREELLFQMDLLEDEDEDDGVNIWDEPTENIITEKVHTTEYDINKSKE 192

Query: 181 NKDDQDDEVVKFASLNKLVEHLTHDSKHDLQFLKTFLMTYQSFCTPEKLMSKLQQRYNCP 360
NKDDQDDEVVKFASLNKLVEHLTHDSKHDLQFLKTFLMTYQSFCTPEKLMSKLQQRYNCP
Sbjct: 193 NKDDQDDEVVKFASLNKLVEHLTHDSKHDLQFLKTFLMTYQSFCTPEKLMSKLQQRYNCP 252

Query: 361 SGHDEMATRNIQIRVINVLKGWVDNYYSDFDDKLIAMLRTFIDQIQIKFPAPASAVNKSL 540
SGHDEMATRNIQIRVINVLKGWVDNYYSDFDDKLIAMLRTFIDQIQIKFPAPASAVNKSL
Sbjct: 253 SGHDEMATRNIQIRVINVLKGWVDNYYSDFDDKLIAMLRTFIDQIQIKFPAPASAVNKSL 312

Query: 541 TKMVEKLSPVNDSKHIFNEKT---------------------------XXXXEFEIYRNI 639
TKMVEKLSPVNDSKHIFNEKT EFEIYRNI
Sbjct: 313 TKMVEKLSPVNDSKHIFNEKTPEPMVPKNIFSNNLSIYDIDEEEIARQLTLIEFEIYRNI 372

Query: 640 KPPELLNQSWNKTKLKSRAPNVLKMIDRFNSVSMWVATMIIQTTKVKARARMMTRFIKIA 819
KPPELLNQSWNKTKLKSRAPNVLKMIDRFNSVSMWVATMIIQTTKVKARARMMTRFIKIA
Sbjct: 373 KPPELLNQSWNKTKLKSRAPNVLKMIDRFNSVSMWVATMIIQTTKVKARARMMTRFIKIA 432

Query: 820 DHLKNLNNYNSLMAIIAGLNFSSVYRLKYTREELSAQTMRTYSDLEKIMNSEGSFKTYRT 999
DHLKNLNNYNSLMAIIAGLNFSSVYRLKYTREELSAQTMRTYSDLEKIMNSEGSFKTYRT
Sbjct: 433 DHLKNLNNYNSLMAIIAGLNFSSVYRLKYTREELSAQTMRTYSDLEKIMNSEGSFKTYRT 492

Query: 1000 RLQNVPPMLPYLGVHLTDLTFIDENPNNFVTDVGGKQVSPNQFHKENPSF 1149
RLQNVPPMLPYLGVHLTDLTFIDENPNNFVTDVGGKQVS F K F
Sbjct: 493 RLQNVPPMLPYLGVHLTDLTFIDENPNNFVTDVGGKQVSLINFTKRTLVF 542

Score = 146 bits (369), Expect = 1e-33
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = +2

Query: 1118 LINFTKRTLVFKIISLIQETQVVPYNLQPVHQIQEFLLNIRSDLKAHTLDQYQQELYRES 1297
LINFTKRTLVFKIISLIQETQVVPYNLQPVHQIQEFLLNIRSDLKAHTLDQYQQELYRES
Sbjct: 532 LINFTKRTLVFKIISLIQETQVVPYNLQPVHQIQEFLLNIRSDLKAHTLDQYQQELYRES 591

Query: 1298 LKREPKKAQRSDVL 1339
LKREPKKAQRSDVL
Sbjct: 592 LKREPKKAQRSDVL 605

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,055,929,328
Number of extensions: 39641071
Number of successful extensions: 102345
Number of sequences better than 10.0: 387
Number of HSP's gapped: 101897
Number of HSP's successfully gapped: 594
Length of query: 447
Length of database: 1,040,966,779
Length adjustment: 132
Effective length of query: 315
Effective length of database: 618,001,159
Effective search space: 194670365085
Effective search space used: 194670365085
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.47 gvh: 0.11 alm: 0.41 top: 0.53 tms: 0.00 mit: 0.15 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

60.0 %: nuclear
24.0 %: cytoplasmic
4.0 %: mitochondrial
4.0 %: vacuolar
4.0 %: plasma membrane
4.0 %: vesicles of secretory system

>> prediction for Contig-U10833-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 1
AF (FL, S) 3
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0