NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U10767-1
Contig ID Contig-U10767-1
Contig update 2002.12.18
Contig sequence 
>Contig-U10767-1 (Contig-U10767-1Q) /CSM_Contig/Contig-U10767-1Q.Seq.d
ATCAATCGTAAAAGGGAGGTACGCCAAACAATTAATTTATAGAAAAAAAA
ATGGGTACAAGAATTTTAGATCTTTTACAACTTCAAAATTTAACAAAACG
TGATCCATCTGCTTATAAAGAGGAATTTTTATTACAATACCAACATTATT
TAACACAATTACAAATCTTTCAATTAAAACCAACTAAAGAATTTAAACAT
TTTTCTCAATTAGTTAGTTATTTAAGTCATGTTTGTGTATGTTATCCAAA
AGAATTATCAGAATTTCCAAAACAAATTTCAGATTTATTAGAAAATAATT
GTAATAATTTAGAACCAGAATTAAGAAGAATTTTAGCAAAAAGTTTAATT
TTAATGAGAAATCGTAATTTATTACCACAAATTCAAATGTTATCATTATT
TTTCAAATTATTTAGAGTTCATGATAAACCACTTCGTTCATTATTATATT
CACATATTGTTGCTGATATTAAAAATACAAATTTAAAACAAAAGAATCAA
AAATTAAATAGAACACTTCAAAATTTCATGTTTACAATGATGAATGATGA
TTCTGAAATTGCTTCAAAAATGTCATTAAAAGTTATGATAGAATTATTTA
GAAAAAAGATTTGGCACGATACAAAGACTGTTAATGTTATTTCAAATGGT
GTATTTTCAAAAAATTCAAAGATTTTAATTACAACATTAAATTTCTTTTT
ACATATTGATAATCCAGATAAACCAGATGAAGAGGAAGAGGATGAAGCAG
TGAAAGAGAAGAGAGCAAAGGATAACTTTAGAAAGAAATCATTGGCACAT
CGTGTTGGTAAAAAGACAAAGGGTAGAATAACACGTTTAGCGAAGAGTAA
AGTTGATTTAAAGAAAGCCAAACAAGAGGAGGACAATAAGTTGCAACCAA
ATTTCCCAGCAATTGAGTTGATTCACGACCCACAAGGATACTGTGAT---
-------TGATGATGATGATGAAGAAGGTGAAGAGGATGAAGAGGTTGAG
GATGAAGAAGATGAAGAAGAAGTAGATGAAGAAGAATTGGAAGATGACGA
AGAAGGAGATTGGGAATCAGGTGAAGAAATTGAAGGTGATGACGATGATG
ATGAAGAATGGGAAGAAGTTGAGGAAGAAGTTGAAGAAGAAGAAGAAGAA
GAAATTNAACCAACAAAGAAGAAATCNCAACAAAAAGAAAAAGTTGAAGT
TTTAAGAACTGATGATATTAAAGTTTTAACAGATGAAGAATTAATTAGAA
TTAGAAAATTAAGAATATTAAAAGAAGCTAGAGAAAATAATAAACAATAT
GAAGATATAGATCAAGATGATGATGAAAATGGTGAAAATGTTCATGGTTT
AATTAGACCAGAAGATTTACAAGGTGCTCATAAAAAGAAGAAAGAAGAGA
AATTGGAAAGAATTGCAAGAGCAAAGGAGGGTAGAGATGGTGGTTATGGT
AGTAAAGCAAGTAGAAGAGATAAAACTGGTAAATCCNCTACAAATGAATA
CAAAGCAAAAGTCACCAAACCATTNGTTNTCACTNTCAAAACTAAAAAAG
TTAGAGGAAAATCACTTAAATCATTTAGAGATAAACAAATTGGTCAAAGA
GAACATTCTGCCAGACAAAAAAGAGGTAGACATTAAAAATCAAAAATTTT
CATTCAATTTTTTTTTTTCCCAAGTTTTTACAATTTTAAGAAAAA
Gap gap included
Contig length 1685
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 3321182
End point 3319496
Strand (PLUS/MINUS) MINUS
Number of clones 5
Number of EST 9
Link to clone list U10767
List of clone(s) 

est1=VHB367F,1,602
est2=CHF467F,4,597
est3=VHL205F,4,602
est4=VHN766F,4,593
est5=AFC543F,465,948
est6=VHN766Z,949,1686
est7=VHB367Z,979,1687
est8=CHF467Z,985,1687
est9=AFC543Z,1154,1668
Translated Amino Acid sequence 
qs*kggtpnn*FIEKKMGTRILDLLQLQNLTKRDPSAYKEEFLLQYQHYLTQLQIFQLKP
TKEFKHFSQLVSYLSHVCVCYPKELSEFPKQISDLLENNCNNLEPELRRILAKSLILMRN
RNLLPQIQMLSLFFKLFRVHDKPLRSLLYSHIVADIKNTNLKQKNQKLNRTLQNFMFTMM
NDDSEIASKMSLKVMIELFRKKIWHDTKTVNVISNGVFSKNSKILITTLNFFLHIDNPDK
PDEEEEDEAVKEKRAKDNFRKKSLAHRVGKKTKGRITRLAKSKVDLKKAKQEEDNKLQPN
FPAIELIHDPQGYCD---

---DDDDEEGEEDEEVEDEEDEEEVDEEELEDDEEGDWESGEEIEGDDDDDEEWEEVEEE
VEEEEEEEIXPTKKKSQQKEKVEVLRTDDIKVLTDEELIRIRKLRILKEARENNKQYEDI
DQDDDENGENVHGLIRPEDLQGAHKKKKEEKLERIARAKEGRDGGYGSKASRRDKTGKSX
TNEYKAKVTKPXVXTXKTKKVRGKSLKSFRDKQIGQREHSARQKRGRH*kskifiqffff
psfynfkk
Translated Amino Acid sequence (All Frames) 
Frame A:
inrkrevrqtinl*kkkwvqef*ifynfki*qnvihllikrnfyyntnii*hnyksfn*n
qlknlnifln*lvi*vmfvyviqknyqnfqnkfqiy*kiivii*nqn*eef*qkv*f**e
iviyyhkfkcyhyfsnylefminhfvhyyihilllilkiqi*nkrikn*iehfkisclq*
*mmilkllqkch*kl**nylekrfgtiqrllmlfqmvyfqkiqrf*lqh*isfyiliiqi
nqmkrkrmkq*krreqritlernhwhivlvkrqrve*hv*rrvkli*rkpnkrrtiscnq
isqqls*ftthkdtv---

---*****rr*rg*rg*g*rr*rrsr*rrigr*rrrrlgir*rn*r**r***rmgrs*gr
s*rrrrrrnxtnkeeixtkrks*sfkn**y*sfnr*rin*n*kiknikrs*rk**ti*ry
rsr***kw*kcswfn*trrftrcs*keerreigknckskgg*rwwlw**sk*kr*nw*ix
yk*iqskshqtixxhxqn*ks*rkit*ii*r*tnwskrtfcqtkkr*tlkiknfhsifff
pkflqf*ek

Frame B:
sivkgryakqliyrkkngyknfrsfttskfnkt*sicl*rgifitiptlfntitnlsikt
n*ri*tffsis*lfksclcmlskriirisktnfrfirk*l**frtrikknfskkfnfnek
s*fittnsnviiifqii*ss**ttsfiiiftycc*y*kykfktkeskik*ntskfhvynd
e**f*ncfknviksydrii*kkdlarykdc*cyfkwcifkkfkdfnynikflfty**sr*
tr*rgrg*ssereeskg*l*keiigtscw*kdkg*nntfsee*s*fkesqtrggq*vatk
fpsn*vdsrptril*---

---DDDDEEGEEDEEVEDEEDEEEVDEEELEDDEEGDWESGEEIEGDDDDDEEWEEVEEE
VEEEEEEEIXPTKKKSQQKEKVEVLRTDDIKVLTDEELIRIRKLRILKEARENNKQYEDI
DQDDDENGENVHGLIRPEDLQGAHKKKKEEKLERIARAKEGRDGGYGSKASRRDKTGKSX
TNEYKAKVTKPXVXTXKTKKVRGKSLKSFRDKQIGQREHSARQKRGRH*kskifiqffff
psfynfkk

Frame C:
qs*kggtpnn*FIEKKMGTRILDLLQLQNLTKRDPSAYKEEFLLQYQHYLTQLQIFQLKP
TKEFKHFSQLVSYLSHVCVCYPKELSEFPKQISDLLENNCNNLEPELRRILAKSLILMRN
RNLLPQIQMLSLFFKLFRVHDKPLRSLLYSHIVADIKNTNLKQKNQKLNRTLQNFMFTMM
NDDSEIASKMSLKVMIELFRKKIWHDTKTVNVISNGVFSKNSKILITTLNFFLHIDNPDK
PDEEEEDEAVKEKRAKDNFRKKSLAHRVGKKTKGRITRLAKSKVDLKKAKQEEDNKLQPN
FPAIELIHDPQGYCD---

---mmmmkkvkrmkrlrmkkmkkk*mkknwkmtkkeignqvkklkvmtmmmkngkklrkk
lkkkkkkkxnqqrrnxnkkkklkf*elmilkf*qmkn*lelen*ey*kklekiinnmki*
ikmmmkmvkmfmv*ldqkiykvlikrrkkrnwkelqeqrrvemvvmvvkqveeiklvnpl
qmntkqkspnhxxslsklkkleenhlnhleinklvkenilpdkkevdiknqkfsfnfffs
qvftilrk
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U10767-1 (Contig-U10767-1Q)
/CSM_Contig/Contig-U10767-1Q.Seq.d
         (1695 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U10767-1 (Contig-U10767-1Q) /CSM_Contig/Conti...   872  0.0
Contig-U11849-1 (Contig-U11849-1Q) /CSM_Contig/Conti...    44  5e-04
Contig-U11450-1 (Contig-U11450-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U14584-1 (Contig-U14584-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U12759-1 (Contig-U12759-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U12728-1 (Contig-U12728-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U11314-1 (Contig-U11314-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U10756-1 (Contig-U10756-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U10219-1 (Contig-U10219-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U03470-1 (Contig-U03470-1Q) /CSM_Contig/Conti...    40  0.008

>Contig-U10767-1 (Contig-U10767-1Q) /CSM_Contig/Contig-U10767-1Q.Seq.d
          Length = 1695

 Score =  872 bits (440), Expect = 0.0
 Identities = 458/467 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atcaatcgtaaaagggaggtacgccaaacaattaatttatagnnnnnnnnntgggtacaa 60
           ||||||||||||||||||||||||||||||||||||||||||         |||||||||
Sbjct: 1   atcaatcgtaaaagggaggtacgccaaacaattaatttatagaaaaaaaaatgggtacaa 60

                                                                       
Query: 61  gaattttagatcttttacaacttcaaaatttaacaaaacgtgatccatctgcttataaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gaattttagatcttttacaacttcaaaatttaacaaaacgtgatccatctgcttataaag 120

                                                                       
Query: 121 aggaatttttattacaataccaacattatttaacacaattacaaatctttcaattaaaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggaatttttattacaataccaacattatttaacacaattacaaatctttcaattaaaac 180

                                                                       
Query: 181 caactaaagaatttaaacatttttctcaattagttagttatttaagtcatgtttgtgtat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caactaaagaatttaaacatttttctcaattagttagttatttaagtcatgtttgtgtat 240

                                                                       
Query: 241 gttatccaaaagaattatcagaatttccaaaacaaatttcagatttattagaaaataatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gttatccaaaagaattatcagaatttccaaaacaaatttcagatttattagaaaataatt 300

                                                                       
Query: 301 gtaataatttagaaccagaattaagaagaattttagcaaaaagtttaattttaatgagaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtaataatttagaaccagaattaagaagaattttagcaaaaagtttaattttaatgagaa 360

                                                                       
Query: 361 atcgtaatttattaccacaaattcaaatgttatcattatttttcaaattatttagagttc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atcgtaatttattaccacaaattcaaatgttatcattatttttcaaattatttagagttc 420

                                                          
Query: 421 atgataaaccacttcgttcattattatattcacatattgttgctgat 467
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgataaaccacttcgttcattattatattcacatattgttgctgat 467


 Score =  837 bits (422), Expect = 0.0
 Identities = 422/422 (100%)
 Strand = Plus / Plus

                                                                       
Query: 526 tcatgtttacaatgatgaatgatgattctgaaattgcttcaaaaatgtcattaaaagtta 585
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tcatgtttacaatgatgaatgatgattctgaaattgcttcaaaaatgtcattaaaagtta 585

                                                                       
Query: 586 tgatagaattatttagaaaaaagatttggcacgatacaaagactgttaatgttatttcaa 645
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tgatagaattatttagaaaaaagatttggcacgatacaaagactgttaatgttatttcaa 645

                                                                       
Query: 646 atggtgtattttcaaaaaattcaaagattttaattacaacattaaatttctttttacata 705
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 atggtgtattttcaaaaaattcaaagattttaattacaacattaaatttctttttacata 705

                                                                       
Query: 706 ttgataatccagataaaccagatgaagaggaagaggatgaagcagtgaaagagaagagag 765
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 ttgataatccagataaaccagatgaagaggaagaggatgaagcagtgaaagagaagagag 765

                                                                       
Query: 766 caaaggataactttagaaagaaatcattggcacatcgtgttggtaaaaagacaaagggta 825
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 caaaggataactttagaaagaaatcattggcacatcgtgttggtaaaaagacaaagggta 825

                                                                       
Query: 826 gaataacacgtttagcgaagagtaaagttgatttaaagaaagccaaacaagaggaggaca 885
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 gaataacacgtttagcgaagagtaaagttgatttaaagaaagccaaacaagaggaggaca 885

                                                                       
Query: 886 ataagttgcaaccaaatttcccagcaattgagttgattcacgacccacaaggatactgtg 945
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 ataagttgcaaccaaatttcccagcaattgagttgattcacgacccacaaggatactgtg 945

             
Query: 946 at 947
           ||
Sbjct: 946 at 947


 Score =  706 bits (356), Expect = 0.0
 Identities = 390/401 (97%)
 Strand = Plus / Plus

                                                                        
Query: 1295 caatatgaagatatagatcaagatgatgatgaaaatggtgaaaatgttcatggtttaatt 1354
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1295 caatatgaagatatagatcaagatgatgatgaaaatggtgaaaatgttcatggtttaatt 1354

                                                                        
Query: 1355 agaccagaagatttacaaggtgctcataaaaagaagaaagaagagaaattggaaagaatt 1414
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1355 agaccagaagatttacaaggtgctcataaaaagaagaaagaagagaaattggaaagaatt 1414

                                                                        
Query: 1415 gcaagagcaaaggagggtagagatggtggttatggtagtaaagcaagtagaagagataaa 1474
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1415 gcaagagcaaaggagggtagagatggtggttatggtagtaaagcaagtagaagagataaa 1474

                                                                        
Query: 1475 actggtaaatccnctacaaatgaatacaaagcaaaagtcaccaaaccattngttntcact 1534
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1475 actggtaaatccnctacaaatgaatacaaagcaaaagtcaccaaaccattngttntcact 1534

                                                                        
Query: 1535 ntcaaaactaaaaaagttagaggaaaatcacttaaatcatttagagataaacaaattggt 1594
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1535 ntcaaaactaaaaaagttagaggaaaatcacttaaatcatttagagataaacaaattggt 1594

                                                                        
Query: 1595 caaagagaacattctgccagacaaaaaagaggtagacattaaaaatcaaaaattttcatt 1654
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1595 caaagagaacattctgccagacaaaaaagaggtagacattaaaaatcaaaaattttcatt 1654

                                                     
Query: 1655 caannnnnnnnnnncccaagtttttacaattttaagaaaaa 1695
            |||           |||||||||||||||||||||||||||
Sbjct: 1655 caatttttttttttcccaagtttttacaattttaagaaaaa 1695


 Score =  109 bits (55), Expect = 1e-23
 Identities = 55/55 (100%)
 Strand = Plus / Plus

                                                                   
Query: 1056 gagattgggaatcaggtgaagaaattgaaggtgatgacgatgatgatgaagaatg 1110
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 gagattgggaatcaggtgaagaaattgaaggtgatgacgatgatgatgaagaatg 1110


 Score = 69.9 bits (35), Expect = 9e-12
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                               
Query: 1200 ttttaagaactgatgatattaaagttttaacagat 1234
            |||||||||||||||||||||||||||||||||||
Sbjct: 1200 ttttaagaactgatgatattaaagttttaacagat 1234


 Score = 30.2 bits (15), Expect = 7.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 1094 gatgatgatgaagaa 1108
            |||||||||||||||
Sbjct: 962  gatgatgatgaagaa 976


>Contig-U11849-1 (Contig-U11849-1Q) /CSM_Contig/Contig-U11849-1Q.Seq.d
          Length = 1380

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1087 tgatgacgatgatgatgaagaa 1108
            ||||||||||||||||||||||
Sbjct: 1075 tgatgacgatgatgatgaagaa 1096


 Score = 30.2 bits (15), Expect = 7.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 1076 gaaattgaaggtgat 1090
            |||||||||||||||
Sbjct: 933  gaaattgaaggtgat 919


>Contig-U11450-1 (Contig-U11450-1Q) /CSM_Contig/Contig-U11450-1Q.Seq.d
          Length = 2124

 Score = 42.1 bits (21), Expect = 0.002
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1087 tgatgacgatgatgatgaaga 1107
            |||||||||||||||||||||
Sbjct: 1441 tgatgacgatgatgatgaaga 1461


 Score = 34.2 bits (17), Expect = 0.48
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                             
Query: 1088 gatgacgatgatgatga 1104
            |||||||||||||||||
Sbjct: 1430 gatgacgatgatgatga 1446


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 28,507
Number of Sequences: 6905
Number of extensions: 28507
Number of successful extensions: 3916
Number of sequences better than 10.0: 529
length of query: 1695
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1679
effective length of database: 5,564,391
effective search space: 9342612489
effective search space used: 9342612489
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.21
Homology vs DNA 
Query= Contig-U10767-1 (Contig-U10767-1Q) /CSM_Contig/Contig-U10767-1Q.Seq.d
         (1695 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ418661) Dictyostelium discoideum cDNA clone:ddv33f17, 5' ...   831   0.0    3
(BJ424645) Dictyostelium discoideum cDNA clone:ddv53i02, 5' ...   831   0.0    3
(BJ364682) Dictyostelium discoideum cDNA clone:ddc32f18, 5' ...   831   0.0    3
(BJ426304) Dictyostelium discoideum cDNA clone:ddv58d17, 5' ...   831   0.0    3
(BJ324436) Dictyostelium discoideum cDNA clone:dda6e11, 5' e...   839   0.0    1
(BJ437215) Dictyostelium discoideum cDNA clone:ddv33f17, 3' ...   690   0.0    3
(BJ445132) Dictyostelium discoideum cDNA clone:ddv58d17, 3' ...   676   0.0    4
(BJ378703) Dictyostelium discoideum cDNA clone:ddc32f18, 3' ...   650   0.0    3
(BJ341353) Dictyostelium discoideum cDNA clone:dda6e11, 3' e...   571   e-165  2
(EJ267352) 1095351023754 Global-Ocean-Sampling_GS-27-01-01-1...    56   0.005  1
(EJ255142) 1095349004144 Global-Ocean-Sampling_GS-27-01-01-1...    56   0.005  1
(AC222910) Bos taurus clone CH240-435I1, WORKING DRAFT SEQUE...    38   0.007  7
(EA486075) Sequence 522 from patent US 7348410.                    42   0.015  2
(CS431601) Sequence 522 from Patent EP1710252.                     42   0.015  2
(BD282072) Flea head, nerve cord, hindgut and malpighian tub...    42   0.015  2
(BF732024) 3175-45 hindgut and Malpighian tubule subtracted ...    42   0.015  2
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp...    36   0.023  22
(AM285304) Spiroplasma citri GII3-3X chromosome, contig Cont...    36   0.032  16
(AE017332) Mycoplasma hyopneumoniae 232, complete genome.          34   0.066  20
(EL471025) CHTS9666.b1_C17.ab1 CHT(LMS) Jerusalem artichoke ...    36   0.067  3
(AC073530) Homo sapiens 12 BAC RP11-123O10 (Roswell Park Can...    52   0.071  1
(DU874308) 143023 Tomato HindIII BAC Library Solanum lycoper...    52   0.071  1
(EL421782) CHCM1337.b1_B23.ab1 CHC(LMS) Texas blueweed Helia...    36   0.091  3
(EK104349) 1092963037980 Global-Ocean-Sampling_GS-31-01-01-1...    42   0.12   2
(EK130559) 1093006418441 Global-Ocean-Sampling_GS-31-01-01-1...    42   0.13   2
(AC087440) Homo sapiens chromosome 17 clone RP11-425G13 map ...    38   0.16   2
(AC018715) Homo sapiens chromosome 11 clone RP11-425G13, WOR...    38   0.16   2
(AC021699) Homo sapiens chromosome 11, clone RP11-277B22, co...    38   0.16   2
(AC110058) Homo sapiens chromosome 11, clone CTD2-3012A18, c...    38   0.16   2
(AC106852) Homo sapiens chromosome 11 clone CTD-2608O8 map 11.     38   0.16   2
(AL359980) Human DNA sequence from clone RP5-1027O15 on chro...    38   0.17   2
(AC106849) Homo sapiens chromosome 11, clone CTD-2154J7, com...    38   0.17   2
(CR925753) Zebrafish DNA sequence from clone CH211-222B21 in...    50   0.17   6
(AL117204) Caenorhabditis elegans YAC Y116A8C.                     36   0.18   11
(EY481620) CBBP11479.fwd CBBP Hirudo medicinalis hermaphrodi...    34   0.21   2
(AC097513) Homo sapiens BAC clone RP11-419E3 from 4, complet...    38   0.24   6
(CR848021) Zebrafish DNA sequence from clone DKEY-219E21 in ...    50   0.28   1
(DT664654) He_wd2a1_41A08_M13R Heliconius erato wing disk 2 ...    50   0.28   1
(FC764848) CBBN1717.fwd CBBN Lottia gigantea 3,4,5,6.5d Larv...    32   0.31   4
(BQ255302) MTNAE86TKM KVKC Medicago truncatula cDNA clone pK...    44   0.35   2
(CL063364) CH216-100C5_RM1.1 CH216 Xenopus (Silurana) tropic...    32   0.35   4
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098...    38   0.50   9
(AL407384) T7 end of clone AV0AA001A05 of library AV0AA from...    48   0.51   2
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875...    36   0.58   12
(AM285307) Spiroplasma citri GII3-3X chromosome, contig Cont...    36   0.62   8
(EK058642) 1092960053547 Global-Ocean-Sampling_GS-31-01-01-1...    38   0.78   2
(AU060215) Dictyostelium discoideum slug cDNA, clone SLA588.       34   0.83   3
(AL034558) Plasmodium falciparum MAL3P2.                           34   0.85   11
(CP000382) Clostridium novyi NT, complete genome.                  34   1.1    19
(BC128617) Xenopus tropicalis sorting nexin 24, mRNA (cDNA c...    48   1.1    1
(AL161514) Arabidopsis thaliana DNA chromosome 4, contig fra...    48   1.1    1
(AC005359) REVERSE-COMPLEMENT OF: F23J3.GCG.SEQ  CHECK: 2754...    48   1.1    1
(AC158259) Ornithorhynchus anatinus clone OA_Bb-25A5, WORKIN...    48   1.1    1
(CL476306) SAIL_252b_B08.v1 SAIL Collection Arabidopsis thal...    48   1.1    1
(EL412948) CHCL10521.b1_B15.ab1 CHC(LMS) Texas blueweed Heli...    48   1.1    1
(DT406427) JGI_CABI7910.rev NIH_XGC_tropOvi1 Xenopus (Silura...    48   1.1    1
(DR846344) JGI_CABE10857.rev NIH_XGC_tropOva1 Xenopus (Silur...    48   1.1    1
(DN096316) JGI_CABE6817.rev NIH_XGC_tropOva1 Xenopus (Silura...    48   1.1    1
(DN094415) JGI_CABE5822.rev NIH_XGC_tropOva1 Xenopus (Silura...    48   1.1    1
(DN025062) JGI_CAAR4995.rev NIH_XGC_tropLiv1 Xenopus (Silura...    48   1.1    1
(CX839506) JGI_CAAK8938.rev NIH_XGC_tropBrn3 Xenopus (Silura...    48   1.1    1
(CX822467) JGI_CAAK2637.rev NIH_XGC_tropBrn3 Xenopus (Silura...    48   1.1    1
(CX447064) JGI_XZG22381.rev NIH_XGC_tropGas7 Xenopus (Silura...    48   1.1    1
(CR431655) Xenopus tropicalis EST, clone TTbA044f08 3'.            48   1.1    1
(CD603411) RZ148A1B10.T3 Zebrafish Kidney Marrow cDNA librar...    48   1.1    1
(BX706044) Xenopus tropicalis EST, clone TTpA010h21 3'.            48   1.1    1
(BU491452) 604129307F1 CSEQRBN37 Gallus gallus cDNA clone Ch...    48   1.1    1
(AW419854) fj84d08.y1 zebrafish gridded kidney Danio rerio c...    48   1.1    1
(CP000728) Clostridium botulinum F str. Langeland, complete ...    48   1.1    1
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    36   1.2    17
(EJ427425) 1093015235034 Global-Ocean-Sampling_GS-28-01-01-1...    36   1.3    3
(CW307422) 104_795_11468133_116_35727_087 Sorghum methylatio...    46   1.4    2
(AL034559) Plasmodium falciparum MAL3P7.                           32   1.6    13
(AE006827) Sulfolobus solfataricus P2 section 186 of 272 of ...    40   1.6    2
(CZ957594) 289210 Tomato EcoRI BAC Library Solanum lycopersi...    38   1.6    2
(AL845369) Zebrafish DNA sequence from clone CH211-12E13 in ...    46   1.7    7
(AC023957) Homo sapiens chromosome 13 clone RP11-349P1 map 1...    34   1.7    8
(DU942222) 370893 Tomato EcoRI BAC Library Solanum lycopersi...    38   1.7    2
(AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2...    36   1.8    14
(AE017308) Mycoplasma mobile 163K complete genome.                 34   1.9    18
(DU009225) 240989 Tomato MboI BAC Library Solanum lycopersic...    44   1.9    2
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135...    36   1.9    10
(AC117267) Dictyostelium discoideum chromosome 2 map 5836255...    38   1.9    6
(EK074823) 1092961023430 Global-Ocean-Sampling_GS-31-01-01-1...    32   2.0    4
(AC181491) Strongylocentrotus purpuratus clone R3-1111F21, W...    40   2.0    7
(AC116960) Dictyostelium discoideum chromosome 2 map complem...    34   2.0    13
(AE014849) Plasmodium falciparum 3D7 chromosome 12, section ...    42   2.0    10
(AE017245) Mycoplasma synoviae 53, complete genome.                32   2.1    22
(EK327633) 1095467012689 Global-Ocean-Sampling_GS-31-01-01-1...    34   2.1    4
(CU179680) Mycoplasma agalactiae PG2 chromosome, complete se...    34   2.1    20
(AC176698) Strongylocentrotus purpuratus clone R3-3088J10, W...    34   2.2    10
(CR847893) Zebrafish DNA sequence from clone CH211-242E19.         34   2.2    2
(AC066606) Homo sapiens chromosome 3 clone RP11-74E4 map 3p,...    38   2.2    11
(AC005825) Arabidopsis thaliana chromosome 2 clone T24I21 ma...    36   2.2    2
(DH276528) Oryzias latipes Fosmid clone:GOLWFno612_k19, reve...    44   2.3    2
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    36   2.4    15
(CU570666) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    40   2.5    6
(DX532736) GH_MBb0030G21r GH_MBb Gossypium hirsutum genomic ...    46   2.5    2
(AC023549) Homo sapiens clone RP11-60C17, WORKING DRAFT SEQU...    42   2.5    6
(AC200131) Zea mays chromosome 3 clone CH201-307G15; ZMMBBc0...    46   2.6    5

>(BJ418661) Dictyostelium discoideum cDNA clone:ddv33f17, 5' end,
           single read.
          Length = 602

 Score =  831 bits (419), Expect(3) = 0.0
 Identities = 419/419 (100%)
 Strand = Plus / Plus


Query: 52  tgggtacaagaattttagatcttttacaacttcaaaatttaacaaaacgtgatccatctg 111
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52  tgggtacaagaattttagatcttttacaacttcaaaatttaacaaaacgtgatccatctg 111


Query: 112 cttataaagaggaatttttattacaataccaacattatttaacacaattacaaatctttc 171
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 cttataaagaggaatttttattacaataccaacattatttaacacaattacaaatctttc 171


Query: 172 aattaaaaccaactaaagaatttaaacatttttctcaattagttagttatttaagtcatg 231
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 aattaaaaccaactaaagaatttaaacatttttctcaattagttagttatttaagtcatg 231


Query: 232 tttgtgtatgttatccaaaagaattatcagaatttccaaaacaaatttcagatttattag 291
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 tttgtgtatgttatccaaaagaattatcagaatttccaaaacaaatttcagatttattag 291


Query: 292 aaaataattgtaataatttagaaccagaattaagaagaattttagcaaaaagtttaattt 351
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 aaaataattgtaataatttagaaccagaattaagaagaattttagcaaaaagtttaattt 351


Query: 352 taatgagaaatcgtaatttattaccacaaattcaaatgttatcattatttttcaaattat 411
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 taatgagaaatcgtaatttattaccacaaattcaaatgttatcattatttttcaaattat 411


Query: 412 ttagagttcatgataaaccacttcgttcattattatattcacatattgttgctgatatt 470
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ttagagttcatgataaaccacttcgttcattattatattcacatattgttgctgatatt 470

 Score =  155 bits (78), Expect(3) = 0.0
 Identities = 78/78 (100%)
 Strand = Plus / Plus


Query: 525 ttcatgtttacaatgatgaatgatgattctgaaattgcttcaaaaatgtcattaaaagtt 584
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ttcatgtttacaatgatgaatgatgattctgaaattgcttcaaaaatgtcattaaaagtt 584


Query: 585 atgatagaattatttaga 602
           ||||||||||||||||||
Sbjct: 585 atgatagaattatttaga 602

 Score = 83.8 bits (42), Expect(3) = 0.0
 Identities = 42/42 (100%)
 Strand = Plus / Plus


Query: 1  atcaatcgtaaaagggaggtacgccaaacaattaatttatag 42
          ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atcaatcgtaaaagggaggtacgccaaacaattaatttatag 42

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,891,911,392
Number of extensions: 125309092
Number of successful extensions: 11500274
Number of sequences better than 10.0: 215
Length of query: 1695
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1671
Effective length of database: 97,308,875,965
Effective search space: 162603131737515
Effective search space used: 162603131737515
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 6.28
Homology vs Protein 
Query= Contig-U10767-1 (Contig-U10767-1Q) /CSM_Contig/Contig-U10767-1Q.Seq.d
         (1695 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q55DE2) RecName: Full=Protein SDA1 homolog; AltName: Full=SDA1 ...   446   e-124
BC168370_1(BC168370|pid:none) Synthetic construct Homo sapiens c...   197   1e-48
(Q9NVU7) RecName: Full=Protein SDA1 homolog; AltName: Full=SDA1 ...   196   2e-48
(Q7KKH3) RecName: Full=Protein SDA1 homolog; AltName: Full=Myste...   195   5e-48
(Q80UZ2) RecName: Full=Protein SDA1 homolog; AltName: Full=SDA1 ...   194   8e-48
(Q5XIQ5) RecName: Full=Protein SDA1 homolog; AltName: Full=SDA1 ...   192   2e-47
AK160646_1(AK160646|pid:none) Mus musculus 10, 11 days embryo wh...   192   2e-47
(Q6NV26) RecName: Full=Protein SDA1 homolog; AltName: Full=SDA1 ...   191   5e-47
(A5D7C2) RecName: Full=Protein SDA1 homolog; AltName: Full=SDA1 ...   191   5e-47
CR760003_1(CR760003|pid:none) Xenopus tropicalis finished cDNA, ...   189   3e-46
BT045887_1(BT045887|pid:none) Salmo salar clone ssal-rgf-535-281...   185   4e-45
BC044283_1(BC044283|pid:none) Xenopus laevis SDA1 domain contain...   183   1e-44
(Q2VPG3) RecName: Full=Protein SDA1 homolog; AltName: Full=SDA1 ...   183   1e-44
BC054040_1(BC054040|pid:none) Homo sapiens SDA1 domain containin...   181   5e-44
AK164608_1(AK164608|pid:none) Mus musculus 13 days embryo lung c...   177   8e-43
(A7S6A5) RecName: Full=Protein SDA1 homolog; AltName: Full=SDA1 ...   150   2e-34
AK300074_1(AK300074|pid:none) Homo sapiens cDNA FLJ55367 complet...   149   4e-34
CP001326_606(CP001326|pid:none) Micromonas sp. RCC299 chromosome...   146   2e-33
AK022683_1(AK022683|pid:none) Homo sapiens cDNA FLJ12621 fis, cl...   140   2e-31
CR749574_1(CR749574|pid:none) Homo sapiens mRNA; cDNA DKFZp686E2...   137   1e-30
CR954217_162(CR954217|pid:none) Ostreococcus tauri strain OTTH05...   132   3e-29
(Q9NEU2) RecName: Full=Protein SDA1 homolog; AltName: Full=Proxi...   126   3e-27
AM269987_4(AM269987|pid:none) Aspergillus niger contig An01c0400...   115   6e-24
AP007151_1046(AP007151|pid:none) Aspergillus oryzae RIB40 genomi...   115   6e-24
AM494954_150(AM494954|pid:none) Leishmania braziliensis chromoso...   114   8e-24
AE017349_364(AE017349|pid:none) Cryptococcus neoformans var. neo...   111   9e-23
AM502235_150(AM502235|pid:none) Leishmania infantum chromosome 17.    109   3e-22
AM920436_2328(AM920436|pid:none) Penicillium chrysogenum Wiscons...   107   1e-21
FM992695_502(FM992695|pid:none) Candida dubliniensis CD36 chromo...   105   4e-21
CR382139_1013(CR382139|pid:none) Debaryomyces hansenii strain CB...   105   7e-21
CP000496_527(CP000496|pid:none) Pichia stipitis CBS 6054 chromos...   104   9e-21
AC141435_19(AC141435|pid:none) Medicago truncatula clone mth2-21...   102   6e-20
BX842597_7(BX842597|pid:none) Neurospora crassa DNA linkage grou...   100   1e-19
AE016818_135(AE016818|pid:none) Ashbya gossypii (= Eremothecium ...    99   6e-19
AL732334_9(AL732334|pid:none) Oryza sativa genomic DNA, chromoso...    97   2e-18
AL662988_18(AL662988|pid:none) Oryza sativa genomic DNA, chromos...    97   2e-18
FN392319_1091(FN392319|pid:none) Pichia pastoris GS115 chromosom...    94   2e-17
CU928180_33(CU928180|pid:none) Kluyveromyces thermotolerans stra...    92   7e-17
AC007357_18(AC007357|pid:none) Arabidopsis thaliana chromosome 1...    82   5e-14
AK226773_1(AK226773|pid:none) Arabidopsis thaliana mRNA for hypo...    82   5e-14
AL161579_12(AL161579|pid:none) Arabidopsis thaliana DNA chromoso...    80   2e-13
BT050137_1(BT050137|pid:none) Salmo salar clone ssal-eve-533-032...    51   1e-04
AC148816_5(AC148816|pid:none) Medicago truncatula chromosome 7 c...    39   0.57
AC141435_20(AC141435|pid:none) Medicago truncatula clone mth2-21...    39   0.75
AB026659_3(AB026659|pid:none) Arabidopsis thaliana genomic DNA, ...    38   1.3
AL844506_228(AL844506|pid:none) Plasmodium falciparum 3D7 chromo...    38   1.3
AM910995_295(AM910995|pid:none) Plasmodium knowlesi strain H chr...    38   1.3
AJ421616_1(AJ421616|pid:none) Saccoglossus kowalevskii mRNA for ...    37   1.7
AL844506_157(AL844506|pid:none) Plasmodium falciparum 3D7 chromo...    37   2.2
AL935282_4(AL935282|pid:none) Zebrafish DNA sequence from clone ...    37   2.2
AM910985_100(AM910985|pid:none) Plasmodium knowlesi strain H chr...    37   2.2
AE014185_169(AE014185|pid:none) Plasmodium falciparum 3D7 chromo...    37   2.2
T45044(T45044)hypothetical protein Y39B6B.r [imported] - Caenorh...    37   2.8
AY088769_1(AY088769|pid:none) Arabidopsis thaliana clone 94723 m...    37   2.8
CP001176_2821(CP001176|pid:none) Bacillus cereus B4264, complete...    37   2.8
(Q59S06) RecName: Full=Nucleolar protein 58;                           36   4.9
BX950225_2(BX950225|pid:none) Zebrafish DNA sequence from clone ...    36   4.9
BC057524_1(BC057524|pid:none) Danio rerio hypothetical protein L...    35   8.3
AM910996_613(AM910996|pid:none) Plasmodium knowlesi strain H chr...    35   8.3
AL844509_303(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    35   8.3
(Q61X54) RecName: Full=Mediator of RNA polymerase II transcripti...    35   8.3
AM910984_51(AM910984|pid:none) Plasmodium knowlesi strain H chro...    35   8.3
CP001159_26(CP001159|pid:none) Thalassiosira pseudonana CCMP1335...    35   8.3
(Q4PBP6) RecName: Full=Stress response protein NST1;                   35   8.3
BT059453_1(BT059453|pid:none) Salmo salar clone ssal-rgf-519-082...    35   8.3

>(Q55DE2) RecName: Full=Protein SDA1 homolog; AltName: Full=SDA1
           domain-containing protein 1 homolog;
          Length = 756

 Score =  446 bits (1148), Expect = e-124
 Identities = 236/299 (78%), Positives = 236/299 (78%)
 Frame = +3

Query: 51  MGTRILDLLQLQNLTKRDPSAYKEEFXXXXXXXXXXXXIFQLKPTKEFKHFSQLVSYLSH 230
           MGTRILDLLQLQNLTKRDPSAYKEEF            IFQLKPTKEFKHFSQLVSYLSH
Sbjct: 1   MGTRILDLLQLQNLTKRDPSAYKEEFLLQYQHYLTQLQIFQLKPTKEFKHFSQLVSYLSH 60

Query: 231 VCVCYPKELSEFPKQISDXXXXXXXXXXXXXRRILAKSLILMRNRNLLPQIQMLSLFFKL 410
           VCVCYPKELSEFPKQISD             RRILAKSLILMRNRNLLPQIQMLSLFFKL
Sbjct: 61  VCVCYPKELSEFPKQISDLLENNCNNLEPELRRILAKSLILMRNRNLLPQIQMLSLFFKL 120

Query: 411 FRVHDKPLRSLLYSHIVADIXXXXXXXXXXXXXXXXXXFMFTMMNDDSEIASKMSLKVMI 590
           FRVHDKPLRSLLYSHIVADI                  FMFTMMNDDSEIASKMSLKVMI
Sbjct: 121 FRVHDKPLRSLLYSHIVADIKNTNLKQKNQKLNRTLQNFMFTMMNDDSEIASKMSLKVMI 180

Query: 591 ELFRKKIWHDTKTVNVISNGVFSKNSKILITTLNFFLHIDNXXXXXXXXXXXXXXXXXXX 770
           ELFRKKIWHDTKTVNVISNGVFSKNSKILITTLNFFLHIDN
Sbjct: 181 ELFRKKIWHDTKTVNVISNGVFSKNSKILITTLNFFLHIDNPDKPDEEEEDEAVKEKRAK 240

Query: 771 XNFRKKSLAHRVGKKTKGRITRLAKSKVDLKKAKQEEDNKLQPNFPAIELIHDPQGYCD 947
            NFRKKSLAHRVGKKTKGRITRLAKSKVDLKKAKQEEDNKLQPNFPAIELIHDPQGYCD
Sbjct: 241 DNFRKKSLAHRVGKKTKGRITRLAKSKVDLKKAKQEEDNKLQPNFPAIELIHDPQGYCD 299

 Score =  263 bits (672), Expect = 1e-68
 Identities = 135/160 (84%), Positives = 136/160 (85%)
 Frame = +2

Query: 1154 IXPTXXXXXXXXXXXXLRTDDIKVLTDEELIRIRKLRILKEARENNKQYEDIDQDDDENG 1333
            I PT            LRTDDIKVLTDEELIRIRKLRILKEARENNKQYED+DQDDDENG
Sbjct: 597  IKPTKKKSQQKEKVEVLRTDDIKVLTDEELIRIRKLRILKEARENNKQYEDMDQDDDENG 656

Query: 1334 ENVHGLIRPEDLQGAHKKKKEEKLERIARAKEGRDGGYGSKASRRDKTGKSXTNEYKAKV 1513
            ENVHGLIRPEDLQGAHKKKKEEKLERIARAKEGRDGGYGSKASRRDKTGKS TNEYKAKV
Sbjct: 657  ENVHGLIRPEDLQGAHKKKKEEKLERIARAKEGRDGGYGSKASRRDKTGKSTTNEYKAKV 716

Query: 1514 TKPXXXXXXXXXXRGKSLKSFRDKQIGQREHSARQKRGRH 1633
            TKP          RGKSLKSFRDKQIGQREHSARQKRGRH
Sbjct: 717  TKPFVLTLKTKKVRGKSLKSFRDKQIGQREHSARQKRGRH 756

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,623,067,027
Number of extensions: 24781571
Number of successful extensions: 72109
Number of sequences better than 10.0: 65
Number of HSP's gapped: 71146
Number of HSP's successfully gapped: 93
Length of query: 565
Length of database: 1,040,966,779
Length adjustment: 134
Effective length of query: 431
Effective length of database: 611,592,589
Effective search space: 263596405859
Effective search space used: 263596405859
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.72  gvh: 0.39  alm: 0.42  top: 0.53  tms: 0.00  mit: 0.25  mip: 0.00
 nuc: 0.12  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 36.0 %: nuclear
	  8.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: mitochondrial

>> prediction for Contig-U10767-1 is cyt
VS (DIR, S) 0
VH (FL, L) 3
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 1
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0