Contig-U10711-1
Contig ID Contig-U10711-1
Contig update 2002.12.18
Contig sequence
>Contig-U10711-1 (Contig-U10711-1Q) /CSM_Contig/Contig-U10711-1Q.Seq.d
ATTATAATTAAACAACTCCTCTCATACGACAAATATATAAATATAGATAC
ATAATAGTAATAATAATAATAATAAAAATAGAGTAAATCAAATCAAATAT
ATTATAATATACATTAAACAACACAAACACAATAACTATTAAAATGTATG
GCAGAACTGCAAGAGCCTCTGAGCTCTTGGATAATTTAAAAGGTGAGATT
GATGCCCTCAACCATGAATTATCATTATATAAACACCAAAAAGATGACTA
TGAAAGAAAATTTCAAAATCAATTAGCAGAATTAAATACAATACAACAAA
CATTATATGATTTGGAGAGGGGTCAAAATAAGATGAAGATACATTATGAA
GAGGAGATTAGACAATTAAAGAGACAACTTGAACAACAAAATATAAATGC
CAGTCAAAGAGATTTGAATAGTCCTTCAACATTTAGATCAAATAGTCCAG
CTCCACCAGCACAACATAATAACAACAACAATAATATCATCAACAACAAC
AATAATAATAACAATAATAATAATAACATGCAAAGAAATACACCAACCCC
AACTATTCCTGATAAAGGTCAACCAAAACAAAGACAACGTTCAGGATCTG
GCGAATTTTATCAACAACCAGGTTTAGGTCCACAACAATTAAATTTCCAA
CAATTAAATTTACAACAACAACAACAACAATTACAACAACAACAACAACA
AGGAAGTGGTCAATCTTTCCCATCATTATCACCATTAGATTCAAATAGAC
ATCCAAAAGAAATGGGTAATAATATGAGTGGTAATAGTATGAGTATGAAT
AACAATAATAACAATTTAAATAAAAAACCAGATATGGAAGAAGTTAAAGA
AGAAGATAGAAGAAGACATGATACTGAAATGAGTGAAGAGAATGGTAAAG
AAAAAGGTACAGATTGGTTAGTTGGATATAATCCAAGTGTTCAAACAAAC
CTAAATATTGATCTTCTTCATAATTTACAACACAATAGTGTTGTTTGTTG
TGTAAACTTTAGTAATGATGGTAAGTATTTGGCTACTGGTTGTAACAGAA
GTGCTCAAATCTATGATGTAGATACCGGTAAAAAAGTTCATGCATTTGTT
GATGAAAGTGAAAAAGATGGAGATTTATATATTAGATCAGTATGTTTTTC
ACCAGATGGTAACTATTTAGCAACTGGTGCTGAAG----------ATTTA
GCAACTGGTGCTGAAGATAAAACTGTTAAAGTTTGGGATATTCACACTAA
AAAGATTCAACATACTGTTCTATGGTCATGAATTGGATATCTATTCTTTG
GATTACTCAAGCGATGGTAGATTCATTGTCTCTGGTAGTGGTGATAAGAA
AGCAAAAATCTGGGATATTGAAAAAGGTAAATGTGCTTTCACACTTGGTA
ATGAAGAAGTTGGTCCAAAGAATGGTGTAACTTCTGTTGCTATGTCACCT
GATGGTAGATTGGTTGCAGCTGGTTCATTGGATAATATTGTACGTTTATG
GGATGCTCAAACTGGTTATTTCTTAGAGAGATATGAAGGCCATTTAGATT
CAGTTTATTCAGTTGCATTCTCACCAGACGGTAAATCTTTAGCATCAGGT
AGTCTTGATAAATCCTTGAAACTTTGGGATTTATCCGGTTCTAGATCACG
TTCAAGATGTAGAGCTACCTTTAATGGTCACAAAGATTTTGTCTTATCTG
TAGCATTTTCACCAGACGGTAGTTGGTTAATTTCTGGTTCAAAGGATAGA
TCAGTCCAATTTTGGGATCCAAGAAATGGTACCACTCATATGATGTTACA
AGGTCATAAGAATTCTGTAATTAGTGTTGCCCTCTCTCCAAAGAATAATT
CTCATGGTGTGTTTGCTACTGGTTCAGGTGATTTCCGTTCAAGATTATGG
AAATATGACTCTTAAACAATTCCACCTCTCTCACTCTCCCTCCCCCTCCA
CTCTCGATAATTCATATTCTTTAATTACAACTTTAATATGAAAAAAAAAA

Gap gap included
Contig length 1990
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 5568419
End point 5570372
Strand (PLUS/MINUS) PLUS
Number of clones 30
Number of EST 48
Link to clone list U10711
List of clone(s)

est1=SLI552F,-1,278
est2=AFA754F,1,609
est3=AFC717F,4,566
est4=AHC543F,4,584
est5=CHF196F,4,620
est6=CFB288F,9,567
est7=CHO886F,9,619
est8=AFF858F,10,608
est9=AHO675F,10,354
est10=CFI206F,10,582
est11=CHO417F,10,622
est12=SLH208F,19,535
est13=SLJ867F,19,282
est14=AFC711F,30,498
est15=AFF516F,37,605
est16=VHK463F,86,623
est17=AFK442F,211,476
est18=SLI552Z,339,810
est19=AFB654F,518,1036
est20=CFF441F,528,1186
est21=AFA754Z,1187,1427
est22=AFC711Z,1218,1952
est23=CHL249Z,1225,1796
est24=VHO610Z,1225,1697
est25=AFC717Z,1231,1980
est26=CFF441Z,1231,1974
est27=CHF196Z,1239,1979
est28=AHC543Z,1267,1843
est29=CFI206Z,1285,1949
est30=CFB288Z,1286,1949
est31=VHK463Z,1286,1805
est32=AHO873Z,1290,1810
est33=SLH208Z,1292,1983
est34=CHO886Z,1295,1886
est35=CHO417Z,1296,1808
est36=CHP110Z,1321,1700
est37=AFB654Z,1358,1950
est38=AFI775Z,1359,1973
est39=SLA248Z,1360,1982
est40=VSE426Z,1376,1992
est41=SLA643Z,1379,1983
est42=AFK442Z,1396,1948
est43=AFF858Z,1518,1938
est44=AFF516Z,1534,1919
est45=SLD223Z,1639,1992
est46=CHE258Z,1659,1908
est47=SLJ867Z,1743,1983
est48=SLJ164Z,1755,1983
Translated Amino Acid sequence
yn*ttplirqiykyryiiviiiiikie*iksnil*YTLNNTNTITIKMYGRTARASELLD
NLKGEIDALNHELSLYKHQKDDYERKFQNQLAELNTIQQTLYDLERGQNKMKIHYEEEIR
QLKRQLEQQNINASQRDLNSPSTFRSNSPAPPAQHNNNNNNIINNNNNNNNNNNNMQRNT
PTPTIPDKGQPKQRQRSGSGEFYQQPGLGPQQLNFQQLNLQQQQQQLQQQQQQGSGQSFP
SLSPLDSNRHPKEMGNNMSGNSMSMNNNNNNLNKKPDMEEVKEEDRRRHDTEMSEENGKE
KGTDWLVGYNPSVQTNLNIDLLHNLQHNSVVCCVNFSNDGKYLATGCNRSAQIYDVDTGK
KVHAFVDESEKDGDLYIRSVCFSPDGNYLATGAE---

---LATGAEDKTVKVWDIHTKKIQHTVLWS*igylffgllkrw*ihclw*w**esknlgy
*kr*mcfhtw**rswskewcnfccyvt*w*igcswfig*yctfmgcsnwlflrei*rpfr
fslfsciltrr*ifsir*s**iletlgfirf*itfkm*syl*wsqrfclicsiftrr*lv
nfwfkg*ispilgskkwyhsydvtrs*efcn*ccplske*fswcvcywfr*fpfkimei*
llnnstsltlpppplsiihil*lql*yekk


Translated Amino Acid sequence (All Frames)
Frame A:
iiikqllsydkyinidt********k*sksnqiyynih*ttqtq*llkcmaelqeplssw
ii*kvrlmpstmnyhyintkkmtmkenfkin*qn*iqynkhymiwrgvkir*ryimkrrl
dn*rdnlnnki*mpvkei*ivlqhldqivqlhqhniitttiisstttiiitiiiitckei
hqpqlflikvnqnkdnvqdlanfinnqv*vhnn*isnn*iynnnnnnynnnnnkevvnls
hhyhh*iqidiqkkwvii*vviv*v*itiiti*iknqiwkklkkkieedmilk*vkrmvk
kkvqig*ldiiqvfkqt*iliffiiyntivlfvv*tlvmmvsiwllvvtevlksmm*ipv
kkfmhllmkvkkmeiyildqyvfhqmvti*qlvlk---

---i*qlvlkikllkfgiftlkrfnilfygheldiysldyssdgrfivsgsgdkkakiwd
iekgkcaftlgneevgpkngvtsvamspdgrlvaagsldnivrlwdaqtgyfleryeghl
dsvysvafspdgkslasgsldkslklwdlsgsrsrsrcratfnghkdfvlsvafspdgsw
lisgskdrsvqfwdprngtthmmlqghknsvisvalspknnshgvfatgsgdfrsrlwky
ds*tipplslslplhsr*fiffnynfnmkkk

Frame B:
l*lnnsshttni*i*ihnsnnnnnknrvnqikyiiiyikqhkhnny*nvwqncksl*alg
*fkr*d*cpqp*iiii*tpkr*l*kkisksisrikynttnii*fgegsk*dedtl*rgd*
tikett*ttkykcqskrfe*sfni*ik*ssststt**qqq*yhqqqq***q****hakky
tnpnys**rstktkttfriwrilsttrfrsttikfptikfttttttittttttrkwsifp
iiitirfk*tskrng**yew**yeye*q**qfk*ktrygrs*rrr*kkt*y*ne*rew*r
kryrlvswi*skcsnkpky*sss*fttq*ccllckl***w*vfgywl*qkcsnl*cryr*
ksscic**k*krwrfiy*ismfftrw*lfsnwc*---

---fsnwc*r*nc*slgysh*kdstycsmvmnwisilwitqamvdslslvvvirkqksgi
lkkvnvlshlvmkklvqrmv*llllchlmvdwlqlvhwiilyvygmlklvis*rdmkai*
iqfiqlhshqtvnl*hqvvlinp*nfgiypvldhvqdvelplmvtkilsyl*hfhqtvvg
*flvqridqsnfgiqemvpli*cykviril*lvlpslqriilmvclllvqvisvqdygnm
tlkqfhlshspspstldnsyslittli*kkk

Frame C:
yn*ttplirqiykyryiiviiiiikie*iksnil*YTLNNTNTITIKMYGRTARASELLD
NLKGEIDALNHELSLYKHQKDDYERKFQNQLAELNTIQQTLYDLERGQNKMKIHYEEEIR
QLKRQLEQQNINASQRDLNSPSTFRSNSPAPPAQHNNNNNNIINNNNNNNNNNNNMQRNT
PTPTIPDKGQPKQRQRSGSGEFYQQPGLGPQQLNFQQLNLQQQQQQLQQQQQQGSGQSFP
SLSPLDSNRHPKEMGNNMSGNSMSMNNNNNNLNKKPDMEEVKEEDRRRHDTEMSEENGKE
KGTDWLVGYNPSVQTNLNIDLLHNLQHNSVVCCVNFSNDGKYLATGCNRSAQIYDVDTGK
KVHAFVDESEKDGDLYIRSVCFSPDGNYLATGAE---

---LATGAEDKTVKVWDIHTKKIQHTVLWS*igylffgllkrw*ihclw*w**esknlgy
*kr*mcfhtw**rswskewcnfccyvt*w*igcswfig*yctfmgcsnwlflrei*rpfr
fslfsciltrr*ifsir*s**iletlgfirf*itfkm*syl*wsqrfclicsiftrr*lv
nfwfkg*ispilgskkwyhsydvtrs*efcn*ccplske*fswcvcywfr*fpfkimei*
llnnstsltlpppplsiihil*lql*yekk

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U10711-1 (Contig-U10711-1Q)
/CSM_Contig/Contig-U10711-1Q.Seq.d
(2000 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U10711-1 (Contig-U10711-1Q) /CSM_Contig/Conti... 2117 0.0
Contig-U11443-1 (Contig-U11443-1Q) /CSM_Contig/Conti... 86 2e-16
Contig-U13963-1 (Contig-U13963-1Q) /CSM_Contig/Conti... 44 6e-04
Contig-U07287-1 (Contig-U07287-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U14051-1 (Contig-U14051-1Q) /CSM_Contig/Conti... 40 0.009
Contig-U01974-1 (Contig-U01974-1Q) /CSM_Contig/Conti... 40 0.009
Contig-U11481-1 (Contig-U11481-1Q) /CSM_Contig/Conti... 38 0.036
Contig-U11117-1 (Contig-U11117-1Q) /CSM_Contig/Conti... 38 0.036
Contig-U14683-1 (Contig-U14683-1Q) /CSM_Contig/Conti... 36 0.14
Contig-U14312-1 (Contig-U14312-1Q) /CSM_Contig/Conti... 34 0.56

>Contig-U10711-1 (Contig-U10711-1Q) /CSM_Contig/Contig-U10711-1Q.Seq.d
Length = 2000

Score = 2117 bits (1068), Expect = 0.0
Identities = 1098/1098 (100%)
Strand = Plus / Plus


Query: 893 tggtaaagaaaaaggtacagattggttagttggatataatccaagtgttcaaacaaacct 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 tggtaaagaaaaaggtacagattggttagttggatataatccaagtgttcaaacaaacct 952


Query: 953 aaatattgatcttcttcataatttacaacacaatagtgttgtttgttgtgtaaactttag 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953 aaatattgatcttcttcataatttacaacacaatagtgttgtttgttgtgtaaactttag 1012


Query: 1013 taatgatggtaagtatttggctactggttgtaacagaagtgctcaaatctatgatgtaga 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 taatgatggtaagtatttggctactggttgtaacagaagtgctcaaatctatgatgtaga 1072


Query: 1073 taccggtaaaaaagttcatgcatttgttgatgaaagtgaaaaagatggagatttatatat 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1073 taccggtaaaaaagttcatgcatttgttgatgaaagtgaaaaagatggagatttatatat 1132


Query: 1133 tagatcagtatgtttttcaccagatggtaactatttagcaactggtgctgaagnnnnnnn 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1133 tagatcagtatgtttttcaccagatggtaactatttagcaactggtgctgaagnnnnnnn 1192


Query: 1193 nnnatttagcaactggtgctgaagataaaactgttaaagtttgggatattcacactaaaa 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1193 nnnatttagcaactggtgctgaagataaaactgttaaagtttgggatattcacactaaaa 1252


Query: 1253 agattcaacatactgttctatggtcatgaattggatatctattctttggattactcaagc 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1253 agattcaacatactgttctatggtcatgaattggatatctattctttggattactcaagc 1312


Query: 1313 gatggtagattcattgtctctggtagtggtgataagaaagcaaaaatctgggatattgaa 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1313 gatggtagattcattgtctctggtagtggtgataagaaagcaaaaatctgggatattgaa 1372


Query: 1373 aaaggtaaatgtgctttcacacttggtaatgaagaagttggtccaaagaatggtgtaact 1432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1373 aaaggtaaatgtgctttcacacttggtaatgaagaagttggtccaaagaatggtgtaact 1432


Query: 1433 tctgttgctatgtcacctgatggtagattggttgcagctggttcattggataatattgta 1492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1433 tctgttgctatgtcacctgatggtagattggttgcagctggttcattggataatattgta 1492


Query: 1493 cgtttatgggatgctcaaactggttatttcttagagagatatgaaggccatttagattca 1552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1493 cgtttatgggatgctcaaactggttatttcttagagagatatgaaggccatttagattca 1552


Query: 1553 gtttattcagttgcattctcaccagacggtaaatctttagcatcaggtagtcttgataaa 1612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1553 gtttattcagttgcattctcaccagacggtaaatctttagcatcaggtagtcttgataaa 1612


Query: 1613 tccttgaaactttgggatttatccggttctagatcacgttcaagatgtagagctaccttt 1672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1613 tccttgaaactttgggatttatccggttctagatcacgttcaagatgtagagctaccttt 1672


Query: 1673 aatggtcacaaagattttgtcttatctgtagcattttcaccagacggtagttggttaatt 1732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1673 aatggtcacaaagattttgtcttatctgtagcattttcaccagacggtagttggttaatt 1732


Query: 1733 tctggttcaaaggatagatcagtccaattttgggatccaagaaatggtaccactcatatg 1792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1733 tctggttcaaaggatagatcagtccaattttgggatccaagaaatggtaccactcatatg 1792


Query: 1793 atgttacaaggtcataagaattctgtaattagtgttgccctctctccaaagaataattct 1852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1793 atgttacaaggtcataagaattctgtaattagtgttgccctctctccaaagaataattct 1852


Query: 1853 catggtgtgtttgctactggttcaggtgatttccgttcaagattatggaaatatgactct 1912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1853 catggtgtgtttgctactggttcaggtgatttccgttcaagattatggaaatatgactct 1912


Query: 1913 taaacaattccacctctctcactctccctccccctccactctcgataattcatattcttt 1972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1913 taaacaattccacctctctcactctccctccccctccactctcgataattcatattcttt 1972


Query: 1973 aattacaactttaatatg 1990
||||||||||||||||||
Sbjct: 1973 aattacaactttaatatg 1990


Score = 692 bits (349), Expect = 0.0
Identities = 349/349 (100%)
Strand = Plus / Plus


Query: 112 cattaaacaacacaaacacaataactattaaaatgtatggcagaactgcaagagcctctg 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 cattaaacaacacaaacacaataactattaaaatgtatggcagaactgcaagagcctctg 171


Query: 172 agctcttggataatttaaaaggtgagattgatgccctcaaccatgaattatcattatata 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 agctcttggataatttaaaaggtgagattgatgccctcaaccatgaattatcattatata 231


Query: 232 aacaccaaaaagatgactatgaaagaaaatttcaaaatcaattagcagaattaaatacaa 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 aacaccaaaaagatgactatgaaagaaaatttcaaaatcaattagcagaattaaatacaa 291


Query: 292 tacaacaaacattatatgatttggagaggggtcaaaataagatgaagatacattatgaag 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tacaacaaacattatatgatttggagaggggtcaaaataagatgaagatacattatgaag 351


Query: 352 aggagattagacaattaaagagacaacttgaacaacaaaatataaatgccagtcaaagag 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 aggagattagacaattaaagagacaacttgaacaacaaaatataaatgccagtcaaagag 411


Query: 412 atttgaatagtccttcaacatttagatcaaatagtccagctccaccagc 460
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 atttgaatagtccttcaacatttagatcaaatagtccagctccaccagc 460


Score = 266 bits (134), Expect = 9e-71
Identities = 134/134 (100%)
Strand = Plus / Plus


Query: 528 atgcaaagaaatacaccaaccccaactattcctgataaaggtcaaccaaaacaaagacaa 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 atgcaaagaaatacaccaaccccaactattcctgataaaggtcaaccaaaacaaagacaa 587


Query: 588 cgttcaggatctggcgaattttatcaacaaccaggtttaggtccacaacaattaaatttc 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 cgttcaggatctggcgaattttatcaacaaccaggtttaggtccacaacaattaaatttc 647


Query: 648 caacaattaaattt 661
||||||||||||||
Sbjct: 648 caacaattaaattt 661


Score = 254 bits (128), Expect = 3e-67
Identities = 128/128 (100%)
Strand = Plus / Plus


Query: 702 ggaagtggtcaatctttcccatcattatcaccattagattcaaatagacatccaaaagaa 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 ggaagtggtcaatctttcccatcattatcaccattagattcaaatagacatccaaaagaa 761


Query: 762 atgggtaataatatgagtggtaatagtatgagtatgaataacaataataacaatttaaat 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 atgggtaataatatgagtggtaatagtatgagtatgaataacaataataacaatttaaat 821


Query: 822 aaaaaacc 829
||||||||
Sbjct: 822 aaaaaacc 829


Score = 63.9 bits (32), Expect = 6e-10
Identities = 32/32 (100%)
Strand = Plus / Plus


Query: 1 attataattaaacaactcctctcatacgacaa 32
||||||||||||||||||||||||||||||||
Sbjct: 1 attataattaaacaactcctctcatacgacaa 32


Score = 34.2 bits (17), Expect = 0.56
Identities = 20/21 (95%)
Strand = Plus / Plus


Query: 633 caacaattaaatttccaacaa 653
|||||||||||||| ||||||
Sbjct: 648 caacaattaaatttacaacaa 668


>Contig-U11443-1 (Contig-U11443-1Q) /CSM_Contig/Contig-U11443-1Q.Seq.d
Length = 2083

Score = 85.7 bits (43), Expect = 2e-16
Identities = 43/43 (100%)
Strand = Plus / Plus


Query: 1914 aaacaattccacctctctcactctccctccccctccactctcg 1956
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1203 aaacaattccacctctctcactctccctccccctccactctcg 1245


>Contig-U13963-1 (Contig-U13963-1Q) /CSM_Contig/Contig-U13963-1Q.Seq.d
Length = 1697

Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus


Query: 762 atgggtaataatatgagtggtaatagtatg 791
||||||||||||||| ||||||||| ||||
Sbjct: 1057 atgggtaataatatgggtggtaataatatg 1086


Score = 32.2 bits (16), Expect = 2.2
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 762 atgggtaataatatga 777
||||||||||||||||
Sbjct: 1084 atgggtaataatatga 1099


Score = 32.2 bits (16), Expect = 2.2
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 762 atgggtaataatatga 777
||||||||||||||||
Sbjct: 1036 atgggtaataatatga 1051


Score = 32.2 bits (16), Expect = 2.2
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 762 atgggtaataatatga 777
||||||||||||||||
Sbjct: 1294 atgggtaataatatga 1309


Score = 30.2 bits (15), Expect = 8.8
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 1293 attctttggattact 1307
|||||||||||||||
Sbjct: 756 attctttggattact 742


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 22,351
Number of Sequences: 6905
Number of extensions: 22351
Number of successful extensions: 2827
Number of sequences better than 10.0: 300
length of query: 2000
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1984
effective length of database: 5,564,391
effective search space: 11039751744
effective search space used: 11039751744
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.21
Homology vs DNA
Query= Contig-U10711-1 (Contig-U10711-1Q) /CSM_Contig/Contig-U10711-1Q.Seq.d
(2000 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AF079369) Dictyostelium discoideum transcriptional represso... 1425 0.0 2
(BJ372097) Dictyostelium discoideum cDNA clone:ddc11b12, 3' ... 1396 0.0 2
(BJ341283) Dictyostelium discoideum cDNA clone:dda6b05, 3' e... 1396 0.0 3
(BJ347264) Dictyostelium discoideum cDNA clone:dda26h16, 3' ... 1388 0.0 2
(AU039228) Dictyostelium discoideum slug cDNA, clone SLH208. 1368 0.0 1
(BJ341297) Dictyostelium discoideum cDNA clone:dda6f03, 3' e... 1368 0.0 2
(BJ373632) Dictyostelium discoideum cDNA clone:ddc3o22, 3' e... 1300 0.0 1
(BJ378826) Dictyostelium discoideum cDNA clone:ddc32o23, 3' ... 1249 0.0 3
(C25547) Dictyostelium discoideum slug cDNA, clone SLA248. 1233 0.0 1
(AU263094) Dictyostelium discoideum vegetative cDNA clone:VS... 1201 0.0 1
(BJ344219) Dictyostelium discoideum cDNA clone:dda18f19, 3' ... 1195 0.0 1
(AU033345) Dictyostelium discoideum slug cDNA, clone SLA643. 1179 0.0 1
(BJ375020) Dictyostelium discoideum cDNA clone:ddc17k02, 3' ... 1142 0.0 2
(BJ349376) Dictyostelium discoideum cDNA clone:dda36e11, 3' ... 1138 0.0 1
(BJ382358) Dictyostelium discoideum cDNA clone:ddc44a14, 3' ... 1132 0.0 1
(BJ385127) Dictyostelium discoideum cDNA clone:ddc51l22, 3' ... 1110 0.0 2
(BJ443028) Dictyostelium discoideum cDNA clone:ddv51n16, 3' ... 1023 0.0 1
(BJ340977) Dictyostelium discoideum cDNA clone:dda4k14, 3' e... 995 0.0 3
(BJ356572) Dictyostelium discoideum cDNA clone:dda60b20, 3' ... 1019 0.0 1
(BJ345004) Dictyostelium discoideum cDNA clone:dda21d12, 3' ... 989 0.0 2
(BJ384587) Dictyostelium discoideum cDNA clone:ddc50b06, 3' ... 961 0.0 2
(BJ358760) Dictyostelium discoideum cDNA clone:ddc11b12, 5' ... 551 0.0 3
(BJ445603) Dictyostelium discoideum cDNA clone:ddv60c04, 3' ... 870 0.0 2
(BJ329874) Dictyostelium discoideum cDNA clone:dda26h16, 5' ... 551 0.0 3
(BJ325856) Dictyostelium discoideum cDNA clone:dda2l13, 5' e... 656 0.0 3
(BJ369823) Dictyostelium discoideum cDNA clone:ddc51l22, 5' ... 656 0.0 3
(BJ369292) Dictyostelium discoideum cDNA clone:ddc50b06, 5' ... 656 0.0 3
(BJ323841) Dictyostelium discoideum cDNA clone:dda12d16, 5' ... 656 0.0 3
(BJ364782) Dictyostelium discoideum cDNA clone:ddc32o23, 5' ... 656 0.0 4
(BJ424194) Dictyostelium discoideum cDNA clone:ddv51n16, 5' ... 656 0.0 2
(BJ323776) Dictyostelium discoideum cDNA clone:dda12o03, 5' ... 656 0.0 2
(BJ340305) Dictyostelium discoideum cDNA clone:dda12d16, 3' ... 759 0.0 2
(BJ331599) Dictyostelium discoideum cDNA clone:dda36e11, 5' ... 656 0.0 3
(BJ361435) Dictyostelium discoideum cDNA clone:ddc17k02, 5' ... 656 0.0 3
(BJ360051) Dictyostelium discoideum cDNA clone:ddc3o22, 5' e... 656 0.0 3
(BJ324376) Dictyostelium discoideum cDNA clone:dda6b05, 5' e... 648 0.0 3
(BJ383145) Dictyostelium discoideum cDNA clone:ddc52c03, 3' ... 686 0.0 1
(AU052379) Dictyostelium discoideum slug cDNA, clone SLD223. 680 0.0 1
(BJ340226) Dictyostelium discoideum cDNA clone:dda12o03, 3' ... 359 0.0 3
(AU062014) Dictyostelium discoideum slug cDNA, clone SLH208. 656 0.0 1
(BJ324385) Dictyostelium discoideum cDNA clone:dda6f03, 5' e... 656 0.0 1
(BJ324079) Dictyostelium discoideum cDNA clone:dda4k14, 5' e... 258 e-174 3
(BJ376907) Dictyostelium discoideum cDNA clone:ddc30c16, 3' ... 482 e-131 1
(AU053884) Dictyostelium discoideum slug cDNA, clone SLJ867. 474 e-129 1
(BJ338290) Dictyostelium discoideum cDNA clone:dda60e20, 5' ... 446 e-125 2
(AU053586) Dictyostelium discoideum slug cDNA, clone SLJ164. 450 e-122 1
(BJ327655) Dictyostelium discoideum cDNA clone:dda21d12, 5' ... 422 e-113 1
(AU053395) Dictyostelium discoideum slug cDNA, clone SLI552. 240 e-100 2
(BJ340550) Dictyostelium discoideum cDNA clone:dda2l13, 3' e... 206 6e-84 2
(AU062231) Dictyostelium discoideum slug cDNA, clone SLI552. 289 2e-77 2
(AU060479) Dictyostelium discoideum slug cDNA, clone SLJ867. 285 3e-72 1
(EC758640) PPE00000863 Agencourt Biosciences Agen-0020 Non-n... 48 5e-17 5
(EC854762) HDE00002246 Hyperamoeba dachnaya Non-normalized (... 54 5e-16 6
(EL577800) Physarum06428 Physarum polycephalum starvation st... 48 2e-14 4
(BJ401360) Dictyostelium discoideum cDNA clone:dds23b03, 3' ... 88 2e-12 1
(EL579389) Physarum06429 Physarum polycephalum starvation st... 48 2e-12 4
(EL565868) Physarum06427 Physarum polycephalum starvation st... 48 5e-11 5
(BZ293306) CG0258.r1 Candida glabrata Random Genomic Library... 56 8e-10 2
(EL564930) Physarum00295 Physarum polycephalum starvation st... 40 5e-07 3
(CT868832) Phaeodactylum tricornutum 5-PRIME EST from clone ... 52 6e-07 2
(EL564357) Physarum06430 Physarum polycephalum starvation st... 40 6e-07 3
(FE240290) CAPG5780.rev CAPG Naegleria gruberi amoeba stage ... 44 7e-07 4
(FE233407) CAPG2269.rev CAPG Naegleria gruberi amoeba stage ... 44 7e-07 4
(CR380951) Candida glabrata strain CBS138 chromosome A compl... 56 8e-07 2
(FE231511) CAPG1259.rev CAPG Naegleria gruberi amoeba stage ... 44 9e-07 4
(FE246478) CAPG9442.rev CAPG Naegleria gruberi amoeba stage ... 44 1e-06 4
(FE235115) CAPG3185.rev CAPG Naegleria gruberi amoeba stage ... 44 1e-06 4
(FE261351) CAZO1950.fwd CAZO Naegleria gruberi Flagellate St... 44 7e-06 4
(FE261350) CAZO1950.rev CAZO Naegleria gruberi Flagellate St... 44 7e-06 4
(AM671072) Entamoeba terrapinae GSS, clone terra182e10.p1k. 46 6e-05 3
(EE594687) EST171 roots (15 days 300mM NaCl) cDNA library Ae... 34 0.001 4
(AL112526) Botrytis cinerea strain T4 cDNA library. 52 0.002 2
(AL112348) Botrytis cinerea strain T4 cDNA library. 52 0.002 2
(EL578298) Physarum05606 Physarum polycephalum starvation st... 38 0.004 3
(AF474160) Candida glabrata global repressor Tup1p (TUP1) ge... 48 0.004 3
(CX585349) TTE00020338 Amplicon Express - Conjugative Form T... 56 0.005 1
(EV829770) FMMAF53TF Tetrahymena thermophila SB210 cDNA libr... 56 0.005 1
(FG746886) G1146P36FD18.T0 Anolis carolinensis pooled normal... 52 0.010 2
(FG756315) G1146P327FE14.T0 Anolis carolinensis pooled norma... 52 0.012 2
(AM989985) Zygosaccharomyces rouxii strain CBS 732 Contig6. 36 0.013 6
(EC758718) PPE00003327 Agencourt Biosciences Agen-0020 Non-n... 38 0.066 2
(CL076331) CH216-139E11_Sp6.1 CH216 Xenopus (Silurana) tropi... 52 0.083 1
(DW979947) MSAM307439_3212_3215 LCM-dissected maize shoot ap... 52 0.083 1
(AW335599) S49C6 AGS-1 Pneumocystis carinii cDNA 3', mRNA se... 52 0.083 1
(BZ299991) KD0463.R1 Kluyveromyces delphensis Random Genomic... 50 0.100 2
(AC171667) Bos taurus clone CH240-279O17, WORKING DRAFT SEQU... 46 0.19 7
(AL672239) Mouse DNA sequence from clone RP23-144D15 on chro... 50 0.33 1
(AM454881) Vitis vinifera contig VV78X003317.3, whole genome... 50 0.33 1
(AC217328) Oryza punctata clone OP__Ba0003P01, *** SEQUENCIN... 50 0.33 1
(CR010038) Forward strand read from insert in 3'HPRT inserti... 50 0.33 1
(CT573071) Kuenenia stuttgartiensis genome fragment KUST_E (... 50 0.33 1
(ER458492) 1092963878435 Global-Ocean-Sampling_GS-35-01-01-1... 48 0.59 2
(CR749741) Zebrafish DNA sequence from clone DKEY-86K10 in l... 36 0.70 2
(AP002027) Homo sapiens genomic DNA, chromosome 4q22-q24, cl... 34 0.70 2
(AC097530) Homo sapiens BAC clone RP11-696N14 from 4, comple... 34 0.72 2
(AY948115) Homo sapiens alcohol dehydrogenase 1A (class I), ... 34 0.79 2
(U11065) Grus vipio mitochondrion cytochrome b gene, complet... 48 1.3 1
(AC160410) Mus musculus 10 BAC RP24-356L3 (Roswell Park Canc... 48 1.3 1
(AC159898) Mus musculus BAC clone RP23-254N11 from chromosom... 48 1.3 1
(AC122215) Mus musculus BAC clone RP23-106M18 from 16, compl... 48 1.3 1

>(AF079369) Dictyostelium discoideum transcriptional repressor TUP1
mRNA, complete cds.
Length = 1947

Score = 1425 bits (719), Expect(2) = 0.0
Identities = 722/723 (99%)
Strand = Plus / Plus


Query: 1268 ttctatggtcatgaattggatatctattctttggattactcaagcgatggtagattcatt 1327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1211 ttctatggtcatgaattggatatctattctttggattactcaagcgatggtagattcatt 1270


Query: 1328 gtctctggtagtggtgataagaaagcaaaaatctgggatattgaaaaaggtaaatgtgct 1387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1271 gtctctggtagtggtgataagaaagcaaaaatctgggatattgaaaaaggtaaatgtgct 1330


Query: 1388 ttcacacttggtaatgaagaagttggtccaaagaatggtgtaacttctgttgctatgtca 1447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1331 ttcacacttggtaatgaagaagttggtccaaagaatggtgtaacttctgttgctatgtca 1390


Query: 1448 cctgatggtagattggttgcagctggttcattggataatattgtacgtttatgggatgct 1507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1391 cctgatggtagattggttgcagctggttcattggataatattgtacgtttatgggatgct 1450


Query: 1508 caaactggttatttcttagagagatatgaaggccatttagattcagtttattcagttgca 1567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1451 caaactggttatttcttagagagatatgaaggccatttagattcagtttattcagttgca 1510


Query: 1568 ttctcaccagacggtaaatctttagcatcaggtagtcttgataaatccttgaaactttgg 1627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1511 ttctcaccagacggtaaatctttagcatcaggtagtcttgataaatccttgaaactttgg 1570


Query: 1628 gatttatccggttctagatcacgttcaagatgtagagctacctttaatggtcacaaagat 1687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1571 gatttatccggttctagatcacgttcaagatgtagagctacctttaatggtcacaaagat 1630


Query: 1688 tttgtcttatctgtagcattttcaccagacggtagttggttaatttctggttcaaaggat 1747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1631 tttgtcttatctgtagcattttcaccagacggtagttggttaatttctggttcaaaggat 1690


Query: 1748 agatcagtccaattttgggatccaagaaatggtaccactcatatgatgttacaaggtcat 1807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1691 agatcagtccaattttgggatccaagaaatggtaccactcatatgatgttacaaggtcat 1750


Query: 1808 aagaattctgtaattagtgttgccctctctccaaagaataattctcatggtgtgtttgct 1867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1751 aagaattctgtaattagtgttgccctctctccaaagaataattctcatggtgtgtttgct 1810


Query: 1868 actggttcaggtgatttccgttcaagattatggaaatatgactcttaaacaattccacct 1927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1811 actggttcaggtgatttccgttcaagattatggaaatatgactcttaaacaattccacct 1870


Query: 1928 ctctcactctccctccccctccactctcgataattcatattctttaattacaactttaat 1987
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1871 ctctcactctccctccccctccgctctcgataattcatattctttaattacaactttaat 1930


Query: 1988 atg 1990
|||
Sbjct: 1931 atg 1933

Score = 656 bits (331), Expect(5) = 0.0
Identities = 331/331 (100%)
Strand = Plus / Plus


Query: 130 caataactattaaaatgtatggcagaactgcaagagcctctgagctcttggataatttaa 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 caataactattaaaatgtatggcagaactgcaagagcctctgagctcttggataatttaa 164


Query: 190 aaggtgagattgatgccctcaaccatgaattatcattatataaacaccaaaaagatgact 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 aaggtgagattgatgccctcaaccatgaattatcattatataaacaccaaaaagatgact 224


Query: 250 atgaaagaaaatttcaaaatcaattagcagaattaaatacaatacaacaaacattatatg 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 atgaaagaaaatttcaaaatcaattagcagaattaaatacaatacaacaaacattatatg 284


Query: 310 atttggagaggggtcaaaataagatgaagatacattatgaagaggagattagacaattaa 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atttggagaggggtcaaaataagatgaagatacattatgaagaggagattagacaattaa 344


Query: 370 agagacaacttgaacaacaaaatataaatgccagtcaaagagatttgaatagtccttcaa 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 agagacaacttgaacaacaaaatataaatgccagtcaaagagatttgaatagtccttcaa 404


Query: 430 catttagatcaaatagtccagctccaccagc 460
|||||||||||||||||||||||||||||||
Sbjct: 405 catttagatcaaatagtccagctccaccagc 435

Score = 551 bits (278), Expect(5) = 0.0
Identities = 278/278 (100%)
Strand = Plus / Plus


Query: 907 gtacagattggttagttggatataatccaagtgttcaaacaaacctaaatattgatcttc 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 gtacagattggttagttggatataatccaagtgttcaaacaaacctaaatattgatcttc 941


Query: 967 ttcataatttacaacacaatagtgttgtttgttgtgtaaactttagtaatgatggtaagt 1026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 ttcataatttacaacacaatagtgttgtttgttgtgtaaactttagtaatgatggtaagt 1001


Query: 1027 atttggctactggttgtaacagaagtgctcaaatctatgatgtagataccggtaaaaaag 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 atttggctactggttgtaacagaagtgctcaaatctatgatgtagataccggtaaaaaag 1061


Query: 1087 ttcatgcatttgttgatgaaagtgaaaaagatggagatttatatattagatcagtatgtt 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 ttcatgcatttgttgatgaaagtgaaaaagatggagatttatatattagatcagtatgtt 1121


Query: 1147 tttcaccagatggtaactatttagcaactggtgctgaa 1184
||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 tttcaccagatggtaactatttagcaactggtgctgaa 1159

Score = 254 bits (128), Expect(5) = 0.0
Identities = 128/128 (100%)
Strand = Plus / Plus


Query: 702 ggaagtggtcaatctttcccatcattatcaccattagattcaaatagacatccaaaagaa 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ggaagtggtcaatctttcccatcattatcaccattagattcaaatagacatccaaaagaa 736


Query: 762 atgggtaataatatgagtggtaatagtatgagtatgaataacaataataacaatttaaat 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 atgggtaataatatgagtggtaatagtatgagtatgaataacaataataacaatttaaat 796


Query: 822 aaaaaacc 829
||||||||
Sbjct: 797 aaaaaacc 804

Score = 165 bits (83), Expect(5) = 0.0
Identities = 83/83 (100%)
Strand = Plus / Plus


Query: 529 tgcaaagaaatacaccaaccccaactattcctgataaaggtcaaccaaaacaaagacaac 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgcaaagaaatacaccaaccccaactattcctgataaaggtcaaccaaaacaaagacaac 563


Query: 589 gttcaggatctggcgaattttat 611
|||||||||||||||||||||||
Sbjct: 564 gttcaggatctggcgaattttat 586

Score = 141 bits (71), Expect(2) = 0.0
Identities = 71/71 (100%)
Strand = Plus / Plus


Query: 1196 atttagcaactggtgctgaagataaaactgttaaagtttgggatattcacactaaaaaga 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 atttagcaactggtgctgaagataaaactgttaaagtttgggatattcacactaaaaaga 1199


Query: 1256 ttcaacatact 1266
|||||||||||
Sbjct: 1200 ttcaacatact 1210

Score = 30.2 bits (15), Expect(5) = 0.0
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 1565 gcattctcaccagacggta 1583
||||| |||||||||||||
Sbjct: 1646 gcattttcaccagacggta 1664

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,926,036,876
Number of extensions: 113326813
Number of successful extensions: 9677345
Number of sequences better than 10.0: 206
Length of query: 2000
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1976
Effective length of database: 97,308,875,965
Effective search space: 192282338906840
Effective search space used: 192282338906840
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 6.28
Homology vs Protein
Query= Contig-U10711-1 (Contig-U10711-1Q) /CSM_Contig/Contig-U10711-1Q.Seq.d
(2000 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AM920427_459(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 244 e-103
AY082798_1(AY082798|pid:none) Penicillium marneffei TupA protein... 244 e-103
AM270328_15(AM270328|pid:none) Aspergillus niger contig An15c001... 243 e-102
AP007164_19(AP007164|pid:none) Aspergillus oryzae RIB40 genomic ... 242 e-101
BT065868_1(BT065868|pid:none) Zea mays full-length cDNA clone ZM... 231 4e-97
AY608603_1(AY608603|pid:none) Exophiala dermatitidis Tup1p gene,... 232 5e-97
U57061_1(U57061|pid:none) Neurospora crassa rco-1 gene, complete... 235 8e-97
AJ252128_1(AJ252128|pid:none) Yarrowia lipolytica tup1 gene for ... 231 1e-95
FM992688_6(FM992688|pid:none) Candida dubliniensis CD36 chromoso... 214 2e-88
(Q09715) RecName: Full=Transcriptional repressor tup11; &CU3296... 217 1e-86
CP000501_7(CP000501|pid:none) Pichia stipitis CBS 6054 chromosom... 209 9e-86
CR382133_567(CR382133|pid:none) Debaryomyces hansenii strain CBS... 208 5e-83
AF005740_1(AF005740|pid:none) Kluyveromyces lactis transcription... 205 2e-80
CU928165_302(CU928165|pid:none) Kluyveromyces thermotolerans str... 202 3e-80
(P16649) RecName: Full=General transcriptional corepressor TUP1;... 206 2e-76
X16365_1(X16365|pid:none) Yeast suppressor gene for flocculation... 206 2e-76
M31733_1(M31733|pid:none) S.cerevisiae TUP1 protein gene, comple... 203 2e-75
AF474160_1(AF474160|pid:none) Candida glabrata global repressor ... 201 2e-57
CP001291_1144(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 149 7e-42
CU074270_1(CU074270|pid:none) Podospora anserina genomic DNA, NW... 155 7e-42
AP009552_6258(AP009552|pid:none) Microcystis aeruginosa NIES-843... 141 1e-41
CP001037_1914(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 148 2e-41
AF323582_1(AF323582|pid:none) Podospora anserina beta transducin... 154 1e-40
AF323584_1(AF323584|pid:none) Podospora anserina beta transducin... 154 1e-40
AM778957_201(AM778957|pid:none) Microcystis aeruginosa PCC 7806 ... 136 2e-40
AF323583_1(AF323583|pid:none) Podospora anserina beta transducin... 149 2e-40
CP000686_859(CP000686|pid:none) Roseiflexus sp. RS-1, complete g... 158 3e-40
AP007175_262(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 153 6e-40
CP000117_1553(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 140 6e-39
BA000045_4356(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 145 6e-39
(Q00808) RecName: Full=Vegetative incompatibility protein HET-E-... 147 2e-38
AP009552_5491(AP009552|pid:none) Microcystis aeruginosa NIES-843... 137 4e-38
(Q8YTC2) RecName: Full=Uncharacterized WD repeat-containing prot... 136 5e-38
CP000828_5861(CP000828|pid:none) Acaryochloris marina MBIC11017,... 157 6e-38
AE1810(AE1810) WD-40 repeat protein [imported] - Nostoc sp. (str... 132 3e-37
CP001037_1143(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 137 3e-37
CP000828_167(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 143 9e-37
CP000117_2804(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 149 1e-36
CP000117_2617(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 132 3e-36
CU074274_1(CU074274|pid:none) Podospora anserina genomic DNA, NW... 155 4e-36
CP000393_2151(CP000393|pid:none) Trichodesmium erythraeum IMS101... 127 4e-36
BA000045_1965(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 139 1e-35
CP000117_4826(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 140 2e-35
AP007163_34(AP007163|pid:none) Aspergillus oryzae RIB40 genomic ... 142 2e-35
CP000393_4067(CP000393|pid:none) Trichodesmium erythraeum IMS101... 129 2e-35
CP001037_1497(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 147 3e-35
BA000045_4351(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 137 4e-35
AP009552_3821(AP009552|pid:none) Microcystis aeruginosa NIES-843... 127 1e-34
AH2195(AH2195) hypothetical protein alr3119 [imported] - Nostoc ... 138 2e-34
CP001037_4818(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 128 6e-34
AM746676_8405(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 145 6e-34
AI2493(AI2493) WD-repeat protein [imported] - Nostoc sp. (strain... 120 2e-33
CP000117_2838(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 127 2e-33
CP001037_1323(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 138 7e-33
AF323585_1(AF323585|pid:none) Podospora anserina beta transducin... 140 9e-33
AG1889(AG1889) WD-40 repeat protein [imported] - Nostoc sp. (str... 126 1e-32
CP001037_5630(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 139 8e-32
CP001037_1947(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 127 9e-32
CP000117_2178(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 133 1e-31
CP000828_160(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 128 1e-31
CP000393_1374(CP000393|pid:none) Trichodesmium erythraeum IMS101... 123 2e-31
CP000807_36(CP000807|pid:none) Cyanothece sp. ATCC 51142 linear ... 130 3e-31
CP000828_3726(CP000828|pid:none) Acaryochloris marina MBIC11017,... 128 1e-30
AM778958_177(AM778958|pid:none) Microcystis aeruginosa PCC 7806 ... 134 2e-30
CP000117_2488(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 109 3e-30
CP001291_1208(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 130 5e-30
CP000099_2768(CP000099|pid:none) Methanosarcina barkeri str. Fus... 107 8e-30
CU633453_76(CU633453|pid:none) Podospora anserina genomic DNA ch... 132 1e-29
CU640366_848(CU640366|pid:none) Podospora anserina genomic DNA c... 134 1e-29
CU074316_1(CU074316|pid:none) Podospora anserina genomic DNA, NW... 134 1e-29
CP001037_6067(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 121 2e-29
CP000117_2100(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 112 2e-29
CP000393_3435(CP000393|pid:none) Trichodesmium erythraeum IMS101... 125 2e-29
CP000845_57(CP000845|pid:none) Acaryochloris marina MBIC11017 pl... 133 3e-29
CP001037_148(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 110 4e-29
AP007175_253(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 132 5e-29
(P49695) RecName: Full=Probable serine/threonine-protein kinase ... 128 6e-29
CP001037_1432(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 129 7e-29
BA000045_2888(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 124 1e-28
AC1842(AC1842) WD-40 repeat protein [imported] - Nostoc sp. (str... 116 2e-28
CP000393_3212(CP000393|pid:none) Trichodesmium erythraeum IMS101... 130 2e-28
CP000806_2172(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 124 2e-28
CP000393_3289(CP000393|pid:none) Trichodesmium erythraeum IMS101... 114 3e-28
AP009552_1750(AP009552|pid:none) Microcystis aeruginosa NIES-843... 118 4e-28
CP000492_814(CP000492|pid:none) Chlorobium phaeobacteroides DSM ... 126 6e-28
CP000393_3425(CP000393|pid:none) Trichodesmium erythraeum IMS101... 128 9e-28
AM778950_12(AM778950|pid:none) Microcystis aeruginosa PCC 7806 g... 116 1e-27
(Q0P593) RecName: Full=WD repeat-containing protein 69; &BC1203... 107 1e-27
AP009552_5466(AP009552|pid:none) Microcystis aeruginosa NIES-843... 123 2e-27
CP000117_2956(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 115 2e-27
(Q8N136) RecName: Full=WD repeat-containing protein 69; &AC0730... 108 3e-27
AK301861_1(AK301861|pid:none) Homo sapiens cDNA FLJ54195 complet... 108 3e-27
CP000148_1200(CP000148|pid:none) Geobacter metallireducens GS-15... 125 4e-27
CP001037_4354(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 110 7e-27
AH2154(AH2154) WD-repeat protein [imported] - Nostoc sp. (strain... 106 9e-27
AP007175_233(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 124 1e-26
CP001097_2083(CP001097|pid:none) Chlorobium limicola DSM 245, co... 120 1e-26
AL078635_13(AL078635|pid:none) Amycolatopsis orientalis cosmid p... 112 1e-26
AK098821_1(AK098821|pid:none) Homo sapiens cDNA FLJ25955 fis, cl... 105 2e-26
CP001099_1375(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 120 2e-26
CP000117_3846(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 115 2e-26
CP001013_1798(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 123 3e-26
AP007151_34(AP007151|pid:none) Aspergillus oryzae RIB40 genomic ... 100 3e-26
AP007169_1(AP007169|pid:none) Aspergillus oryzae RIB40 genomic D... 117 3e-26
CP001037_5275(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 106 4e-26
DQ151642_1(DQ151642|pid:none) Chlamydomonas reinhardtii WD repea... 115 5e-26
CP000828_20(CP000828|pid:none) Acaryochloris marina MBIC11017, c... 116 7e-26
CP000844_164(CP000844|pid:none) Acaryochloris marina MBIC11017 p... 113 9e-26
CP000828_5196(CP000828|pid:none) Acaryochloris marina MBIC11017,... 120 1e-25
CP000686_3296(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 111 2e-25
AE010299_2454(AE010299|pid:none) Methanosarcina acetivorans str.... 103 2e-25
CP000828_5338(CP000828|pid:none) Acaryochloris marina MBIC11017,... 120 2e-25
CP000089_3569(CP000089|pid:none) Dechloromonas aromatica RCB, co... 118 2e-25
AM746676_4558(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 111 2e-25
CP000806_3916(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 119 3e-25
AM238664_1098(AM238664|pid:none) Streptomyces ambofaciens ATCC 2... 103 6e-25
CP000806_3920(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 109 6e-25
CT573213_1700(CT573213|pid:none) Frankia alni str. ACN14A chromo... 108 6e-25
CP000806_1073(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 109 7e-25
CP000117_5003(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 117 1e-24
AF1890(AF1890) WD-repeat protein [imported] - Nostoc sp. (strain... 117 1e-24
CP000820_1838(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 104 2e-24
AP009552_1527(AP009552|pid:none) Microcystis aeruginosa NIES-843... 117 2e-24
CP001101_2134(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 117 2e-24
AP009493_3398(AP009493|pid:none) Streptomyces griseus subsp. gri... 103 3e-24
CP000839_184(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 114 3e-24
CP000393_1925(CP000393|pid:none) Trichodesmium erythraeum IMS101... 114 3e-24
CP000119_130(CP000119|pid:none) Anabaena variabilis ATCC 29413 p... 111 4e-24
CP001110_343(CP001110|pid:none) Pelodictyon phaeoclathratiforme ... 115 5e-24
CP001291_5177(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 103 5e-24
AM746676_2689(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 106 6e-24
AM746676_3634(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 112 6e-24
AM778942_51(AM778942|pid:none) Microcystis aeruginosa PCC 7806 g... 115 8e-24
CP001344_1900(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 115 8e-24
CP000117_2876(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 105 1e-23
BA000045_2244(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 114 1e-23
AD1842(AD1842) WD-40 repeat protein [imported] - Nostoc sp. (str... 111 1e-23
CP001037_139(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 102 2e-23
CP001099_247(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ... 113 2e-23
CP000828_5917(CP000828|pid:none) Acaryochloris marina MBIC11017,... 107 3e-23
CP001337_2947(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 103 3e-23
CP001038_141(CP001038|pid:none) Nostoc punctiforme PCC 73102 pla... 112 4e-23
AM746676_4559(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 112 4e-23
CP001037_247(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 112 4e-23
CP001328_404(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 97 6e-23
CP000854_3359(CP000854|pid:none) Mycobacterium marinum M, comple... 110 6e-23
AY738474_1(AY738474|pid:none) Gemmata sp. Wa1-1 WD-repeat protei... 112 7e-23
CP001291_2528(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 112 7e-23
(Q9D7H2) RecName: Full=WD repeat-containing protein 5B; &AK0092... 105 1e-22
AK016201_1(AK016201|pid:none) Mus musculus adult male testis cDN... 107 1e-22
(Q5BK30) RecName: Full=WD repeat-containing protein 69; &BC0912... 106 1e-22
(Q5FWQ6) RecName: Full=WD repeat-containing protein 69; &BC0892... 105 2e-22
CP000820_3699(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 110 2e-22
AP008931_213(AP008931|pid:none) Rhodococcus erythropolis PR4 pla... 108 3e-22
CP000393_145(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 108 6e-22
AL939118_27(AL939118|pid:none) Streptomyces coelicolor A3(2) com... 108 6e-22
(Q6P2Y2) RecName: Full=WD repeat-containing protein 69; &BC0642... 103 7e-22
AC159435_6(AC159435|pid:none) Trypanosoma brucei chromosome 8 cl... 108 7e-22
CP000686_3299(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 107 1e-21
CP000117_1538(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 98 2e-21
CP001100_2468(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 107 2e-21
AK105499_1(AK105499|pid:none) Oryza sativa Japonica Group cDNA c... 94 3e-21
CP000839_340(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 105 3e-21
(Q5RE95) RecName: Full=WD repeat-containing protein 5B; &CR8576... 100 4e-21
CP001344_3209(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 102 6e-21
BA000045_2655(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 105 6e-21
CP001108_1939(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 102 7e-21
AE016818_101(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 105 8e-21
CP001291_699(CP001291|pid:none) Cyanothece sp. PCC 7424, complet... 105 8e-21
CP000117_4653(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 104 1e-20
DQ647383_1(DQ647383|pid:none) Chlamydomonas reinhardtii lissence... 104 1e-20
AF299085_1(AF299085|pid:none) Myxococcus xanthus Bap1 (bap1) gen... 104 1e-20
CP000249_314(CP000249|pid:none) Frankia sp. CcI3, complete genome. 104 1e-20
BC052124_1(BC052124|pid:none) Danio rerio WD repeat domain 5, mR... 104 1e-20
CT573213_3533(CT573213|pid:none) Frankia alni str. ACN14A chromo... 102 1e-20
CP000117_1621(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 96 1e-20
CP000820_6636(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 97 1e-20
BA000039_488(BA000039|pid:none) Thermosynechococcus elongatus BP... 102 2e-20
AJ011376_1(AJ011376|pid:none) Homo sapiens mRNA for hypothetical... 103 2e-20
(Q2KIG2) RecName: Full=WD repeat-containing protein 5; &BC11265... 103 2e-20
AK144091_1(AK144091|pid:none) Mus musculus RCB-0559 K-1 . F1 cDN... 103 2e-20
BT050222_1(BT050222|pid:none) Salmo salar clone ssal-sjb-015-257... 103 3e-20
FN357410_12(FN357410|pid:none) Schistosoma mansoni genome sequen... 99 4e-20
(Q6P5M2) RecName: Full=WD repeat-containing protein 61; &BC0628... 102 5e-20
CP000108_212(CP000108|pid:none) Chlorobium chlorochromatii CaD3,... 102 5e-20
AL772282_6(AL772282|pid:none) Mouse DNA sequence from clone RP23... 99 6e-20
CP000828_4370(CP000828|pid:none) Acaryochloris marina MBIC11017,... 101 9e-20
EF083131_1(EF083131|pid:none) Picea sitchensis clone WS02722_J02... 94 1e-19
CP000393_2802(CP000393|pid:none) Trichodesmium erythraeum IMS101... 84 1e-19
BC077844_1(BC077844|pid:none) Xenopus laevis WD repeat domain 5,... 101 1e-19
(P74442) RecName: Full=Uncharacterized WD repeat-containing prot... 101 1e-19
BC056720_1(BC056720|pid:none) Danio rerio PRP4 pre-mRNA processi... 101 1e-19
CP000842_108(CP000842|pid:none) Acaryochloris marina MBIC11017 p... 101 1e-19
(Q5ZJH5) RecName: Full=WD repeat-containing protein 61; &AJ7204... 101 1e-19
(Q5M786) RecName: Full=WD repeat-containing protein 5; &BC08100... 100 2e-19
AF326339_1(AF326339|pid:none) Aedes aegypti unknown protein i8 m... 100 2e-19
AF326340_1(AF326340|pid:none) Aedes aegypti unknown protein i8 m... 100 2e-19
CP000393_3924(CP000393|pid:none) Trichodesmium erythraeum IMS101... 100 2e-19
CP000117_173(CP000117|pid:none) Anabaena variabilis ATCC 29413, ... 100 2e-19
(Q9D994) RecName: Full=WD repeat-containing protein 38; &AK0072... 100 2e-19
(Q91WQ5) RecName: Full=TAF5-like RNA polymerase II p300/CBP-asso... 97 2e-19
BC160901_1(BC160901|pid:none) Rattus norvegicus TAF5-like RNA po... 97 2e-19
BT045543_1(BT045543|pid:none) Salmo salar clone ssal-rgf-524-224... 95 2e-19
DQ213259_1(DQ213259|pid:none) Taeniopygia guttata clone 0061P001... 100 3e-19
AY064077_1(AY064077|pid:none) Aedes aegypti clone unKRc2 unknown... 100 3e-19
(Q90ZL4) RecName: Full=Lissencephaly-1 homolog B; &AY032881_1(A... 92 3e-19
AM270178_91(AM270178|pid:none) Aspergillus niger contig An08c023... 100 3e-19
(P38129) RecName: Full=Transcription initiation factor TFIID sub... 100 3e-19
CP000820_6355(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 100 3e-19
(Q6PBD6) RecName: Full=WD repeat-containing protein 61; &BC0597... 100 3e-19
BA000012_2184(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 92 4e-19
(Q93847) RecName: Full=Uncharacterized WD repeat-containing prot... 97 4e-19
CU928169_531(CU928169|pid:none) Kluyveromyces thermotolerans str... 99 4e-19
AM441735_1(AM441735|pid:none) Vitis vinifera contig VV78X156877.... 99 4e-19
S36113(S36113)LIS-1 protein - human 93 5e-19
(P43034) RecName: Full=Platelet-activating factor acetylhydrolas... 93 5e-19
(Q5REG7) RecName: Full=Platelet-activating factor acetylhydrolas... 93 5e-19
AK147309_1(AK147309|pid:none) Mus musculus adult male brain UNDE... 93 5e-19
L25109_1(L25109|pid:none) Mus musculus LIS mRNA, partial cds. 93 5e-19
CP000828_671(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 99 6e-19
CT573213_677(CT573213|pid:none) Frankia alni str. ACN14A chromos... 99 6e-19
(Q9ERF3) RecName: Full=WD repeat-containing protein 61; AltName:... 99 6e-19
AL832918_1(AL832918|pid:none) Homo sapiens mRNA; cDNA DKFZp762M0... 88 6e-19
(O75529) RecName: Full=TAF5-like RNA polymerase II p300/CBP-asso... 96 7e-19
(Q1LV15) RecName: Full=WD repeat-containing protein 69; &BC1244... 95 7e-19
(P43033) RecName: Full=Platelet-activating factor acetylhydrolas... 93 7e-19
AK167824_1(AK167824|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 93 7e-19
CP000117_2141(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 89 7e-19
AK153862_1(AK153862|pid:none) Mus musculus 2 days neonate thymus... 99 7e-19
BC077273_1(BC077273|pid:none) Xenopus laevis cDNA clone IMAGE:40... 99 7e-19
(Q4V7Y7) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 99 7e-19
CR405685_1(CR405685|pid:none) Zebrafish DNA sequence from clone ... 96 9e-19
BT075698_1(BT075698|pid:none) Osmerus mordax clone omor-rgc-001-... 97 9e-19
(Q5JTN6) RecName: Full=WD repeat-containing protein 38; &AL3549... 98 1e-18
AK002149_1(AK002149|pid:none) Homo sapiens cDNA FLJ11287 fis, cl... 98 1e-18
AE014297_1106(AE014297|pid:none) Drosophila melanogaster chromos... 98 1e-18
(Q9GL51) RecName: Full=Platelet-activating factor acetylhydrolas... 92 1e-18
(Q8BHD1) RecName: Full=WD repeat-containing protein 51B; &AK045... 81 1e-18
(Q17963) RecName: Full=WD repeat-containing protein tag-125; &T... 94 1e-18
CT573213_1205(CT573213|pid:none) Frankia alni str. ACN14A chromo... 90 1e-18
BC124403_1(BC124403|pid:none) Danio rerio WD repeat domain 69, m... 94 1e-18
(Q6GMD2) RecName: Full=WD repeat-containing protein 61; &BC0741... 97 2e-18
(Q4V7A0) RecName: Full=WD repeat-containing protein 61; &BC0980... 97 2e-18
CP000828_3398(CP000828|pid:none) Acaryochloris marina MBIC11017,... 97 2e-18
CP000839_311(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 94 2e-18
L13387_1(L13387|pid:none) Homo sapiens (clone 6-1) Miller-Dieker... 91 2e-18
CU074315_1(CU074315|pid:none) Podospora anserina genomic DNA, NW... 97 2e-18
CU928173_540(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 97 2e-18
CP001037_2020(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 97 2e-18
(Q8W1K8) RecName: Full=Protein Mut11; AltName: Full=Mut11p; &AF... 97 2e-18
CP000502_174(CP000502|pid:none) Pichia stipitis CBS 6054 chromos... 97 2e-18
AF323581_1(AF323581|pid:none) Podospora anserina beta transducin... 97 2e-18
(Q9PTR5) RecName: Full=Platelet-activating factor acetylhydrolas... 91 2e-18
(Q5RD06) RecName: Full=WD repeat-containing protein 51B; &CR858... 85 3e-18
BC008547_1(BC008547|pid:none) Mus musculus WD repeat domain 5, m... 97 3e-18
CR380959_230(CR380959|pid:none) Candida glabrata strain CBS138 c... 97 3e-18
DQ294261_1(DQ294261|pid:none) Solanum tuberosum clone 111C07 ver... 97 3e-18
AK012342_1(AK012342|pid:none) Mus musculus 11 days embryo whole ... 97 3e-18
AK147793_1(AK147793|pid:none) Mus musculus melanocyte cDNA, RIKE... 91 3e-18
BA000045_725(BA000045|pid:none) Gloeobacter violaceus PCC 7421 D... 96 4e-18
EF661023_4(EF661023|pid:none) Carica papaya clone BAC PH61H02, c... 96 4e-18
AJ009770_1(AJ009770|pid:none) Homo sapiens mRNA for putative tra... 96 4e-18
AC129717_13(AC129717|pid:none) Oryza sativa (japonica cultivar-g... 96 5e-18
AP009552_3560(AP009552|pid:none) Microcystis aeruginosa NIES-843... 96 5e-18
CP000230_1281(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117... 89 5e-18
(Q803D2) RecName: Full=Lissencephaly-1 homolog B; &BC044530_1(B... 92 5e-18
BC145995_1(BC145995|pid:none) Mus musculus WD repeat domain 69, ... 96 6e-18
AJ575934_4(AJ575934|pid:none) Micromonospora purpurea DOS biosyn... 96 6e-18
(Q55563) RecName: Full=Uncharacterized WD repeat-containing prot... 96 6e-18
AJ628149_32(AJ628149|pid:none) Micromonospora echinospora genomi... 96 6e-18
AK016977_1(AK016977|pid:none) Mus musculus adult male testis cDN... 96 6e-18
(Q8BG40) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 94 7e-18
AK010364_1(AK010364|pid:none) Mus musculus ES cells cDNA, RIKEN ... 94 7e-18
AK031630_1(AK031630|pid:none) Mus musculus 13 days embryo male t... 94 7e-18
(Q9BVA0) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 94 7e-18
AY891382_1(AY891382|pid:none) Synthetic construct Homo sapiens c... 94 7e-18
BT045765_1(BT045765|pid:none) Salmo salar clone ssal-rgf-530-312... 89 7e-18
FN313599_1(FN313599|pid:none) Schistosoma japonicum isolate Anhu... 83 8e-18
BC108505_1(BC108505|pid:none) Xenopus laevis hypothetical protei... 95 8e-18
AG2400(AG2400) WD-repeat protein [imported] - Nostoc sp. (strain... 95 8e-18
CP000820_1110(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 95 8e-18
BC149991_1(BC149991|pid:none) Bos taurus katanin p80 (WD repeat ... 94 9e-18
AF306867_1(AF306867|pid:none) Aedes triseriatus unknown mRNA. 95 1e-17
(Q5ZIU8) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 93 1e-17
DQ410670_1(DQ410670|pid:none) Gallus gallus brain p80 katanin mR... 93 1e-17
AM462218_2(AM462218|pid:none) Vitis vinifera contig VV78X125617.... 89 1e-17
BT086255_1(BT086255|pid:none) Zea mays full-length cDNA clone ZM... 94 1e-17
AB174681_1(AB174681|pid:none) Macaca fascicularis brain cDNA clo... 94 1e-17
BC161681_1(BC161681|pid:none) Xenopus laevis TBP-associated fact... 91 2e-17
AJ720686_1(AJ720686|pid:none) Gallus gallus mRNA for hypothetica... 93 2e-17
CR812943_6(CR812943|pid:none) Zebrafish DNA sequence from clone ... 90 2e-17
AJ719544_1(AJ719544|pid:none) Gallus gallus mRNA for hypothetica... 93 2e-17
EF677877_1(EF677877|pid:none) Picea sitchensis clone WS0277_A02 ... 94 2e-17
(Q6NVM2) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 94 2e-17
(Q2TBP4) RecName: Full=WD repeat-containing protein 51A; &BC109... 89 3e-17
CT573213_1905(CT573213|pid:none) Frankia alni str. ACN14A chromo... 93 3e-17
FN314118_1(FN314118|pid:none) Schistosoma japonicum isolate Anhu... 93 3e-17
AP008213_479(AP008213|pid:none) Oryza sativa (japonica cultivar-... 93 3e-17
AM778874_8(AM778874|pid:none) Microcystis aeruginosa PCC 7806 ge... 93 3e-17
AP007169_166(AP007169|pid:none) Aspergillus oryzae RIB40 genomic... 93 3e-17
AP004273_30(AP004273|pid:none) Oryza sativa Japonica Group genom... 93 3e-17
BC075582_1(BC075582|pid:none) Xenopus tropicalis TAF5-like RNA p... 93 3e-17
CP000393_3433(CP000393|pid:none) Trichodesmium erythraeum IMS101... 78 3e-17
BC119693_1(BC119693|pid:none) Homo sapiens WD repeat domain 51A,... 89 3e-17
AK154163_1(AK154163|pid:none) Mus musculus NOD-derived CD11c +ve... 89 3e-17
AK075289_1(AK075289|pid:none) Homo sapiens cDNA FLJ90808 fis, cl... 89 3e-17
AK315688_1(AK315688|pid:none) Homo sapiens cDNA, FLJ96786. 89 3e-17
BC110877_1(BC110877|pid:none) Homo sapiens WD repeat domain 51A,... 89 3e-17
AK011064_1(AK011064|pid:none) Mus musculus 13 days embryo liver ... 89 3e-17
CP001291_3285(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 93 4e-17
BC052268_1(BC052268|pid:none) Homo sapiens TAF5 RNA polymerase I... 89 4e-17
AK088953_1(AK088953|pid:none) Mus musculus 2 days neonate thymus... 89 4e-17
U75309_1(U75309|pid:none) Human TBP-associated factor (hTAFII100... 89 4e-17
BC156180_1(BC156180|pid:none) Synthetic construct Mus musculus c... 89 4e-17
(Q15542) RecName: Full=Transcription initiation factor TFIID sub... 89 4e-17
A30047(A30047) enhancer of split protein - fruit fly (Drosophila... 68 4e-17
AE014297_4069(AE014297|pid:none) Drosophila melanogaster chromos... 68 4e-17
BA000045_1630(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 92 5e-17
CP000240_1166(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-1... 92 5e-17
AF052432_1(AF052432|pid:none) Homo sapiens katanin p80 subunit m... 91 6e-17
AY812578_1(AY812578|pid:none) Schistosoma japonicum SJCHGC09556 ... 92 7e-17
CP000473_5641(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 92 7e-17
AE014296_2405(AE014296|pid:none) Drosophila melanogaster chromos... 91 7e-17
AP008217_1412(AP008217|pid:none) Oryza sativa (japonica cultivar... 92 9e-17
CR457105_1(CR457105|pid:none) Homo sapiens full open reading fra... 92 9e-17
BX569795_1(BX569795|pid:none) Zebrafish DNA sequence from clone ... 70 9e-17
BC163578_1(BC163578|pid:none) Danio rerio si:ch211-81i17.1, mRNA... 70 9e-17
(Q8C092) RecName: Full=Transcription initiation factor TFIID sub... 87 9e-17
CP000820_515(CP000820|pid:none) Frankia sp. EAN1pec, complete ge... 86 1e-16
AE014134_53(AE014134|pid:none) Drosophila melanogaster chromosom... 91 1e-16
(Q3MHE2) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp... 91 1e-16
AP004312_39(AP004312|pid:none) Synechocystis sp. PCC 6803 plasmi... 91 1e-16
(Q7ZUV2) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 90 1e-16
BC056099_1(BC056099|pid:none) Xenopus laevis hypothetical protei... 91 1e-16
BC045888_1(BC045888|pid:none) Danio rerio WD repeat domain 51A, ... 91 2e-16
AB089281_1(AB089281|pid:none) Mamestra brassicae mRNA for recept... 91 2e-16
AF127799_1(AF127799|pid:none) Homo sapiens G protein beta subuni... 91 2e-16
AF016369_1(AF016369|pid:none) Homo sapiens U4/U6 small nuclear r... 91 2e-16
AL449305_7(AL449305|pid:none) Human DNA sequence from clone RP11... 91 2e-16
CP000600_30(CP000600|pid:none) Ostreococcus lucimarinus CCE9901 ... 91 2e-16
AK313131_1(AK313131|pid:none) Homo sapiens cDNA, FLJ93619, highl... 91 2e-16
AY316746_172(AY316746|pid:none) Rhizobium sp. NGR234 megaplasmid... 91 2e-16
BC168104_1(BC168104|pid:none) Xenopus tropicalis cDNA clone MGC:... 87 2e-16
AL953843_3(AL953843|pid:none) Zebrafish DNA sequence from clone ... 69 2e-16
AY763504_1(AY763504|pid:none) Lytechinus variegatus co-repressor... 70 2e-16
AK090114_1(AK090114|pid:none) Mus musculus RCB-1283 B16 melanoma... 90 3e-16
AL939125_246(AL939125|pid:none) Streptomyces coelicolor A3(2) co... 90 3e-16
AY223226_1(AY223226|pid:none) Schistosoma japonicum clone ZZD323... 90 3e-16
(Q6C709) RecName: Full=Pre-mRNA-splicing factor PRP46; AltName: ... 90 3e-16
(Q9DAW6) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp... 90 3e-16
GM960771_1(GM960771|pid:none) Sequence 7725 from Patent WO200814... 90 3e-16
CP001291_1475(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 88 3e-16
BC077170_1(BC077170|pid:none) Xenopus laevis enhancer of split g... 68 3e-16
BC090131_1(BC090131|pid:none) Xenopus tropicalis transducin-like... 68 3e-16
AF289027_1(AF289027|pid:none) Xenopus laevis enhancer of split g... 68 3e-16
EU939763_1(EU939763|pid:none) Saccoglossus kowalevskii groucho p... 68 3e-16
(Q6ZMY6) RecName: Full=WD repeat-containing protein 88; AltName:... 84 3e-16
CR940353_257(CR940353|pid:none) Theileria annulata strain Ankara... 90 3e-16
U77381_1(U77381|pid:none) Arabidopsis thaliana WD-40 repeat prot... 90 3e-16
(P93107) RecName: Full=Flagellar WD repeat-containing protein Pf... 89 4e-16
DQ311233_1(DQ311233|pid:none) Bombyx mori WD repeat domain 61 mR... 86 4e-16
AB022686_1(AB022686|pid:none) Solanum lycopersicum mRNA for LeAr... 89 5e-16
CP000820_5763(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 89 5e-16
AF116463_7(AF116463|pid:none) Streptomyces lincolnensis putative... 89 5e-16
AJ719819_1(AJ719819|pid:none) Gallus gallus mRNA for hypothetica... 89 5e-16
EU649702_1(EU649702|pid:none) Bombyx mori groucho protein mRNA, ... 67 5e-16
(P29387) RecName: Full=Guanine nucleotide-binding protein subuni... 85 5e-16
AK158965_1(AK158965|pid:none) Mus musculus visual cortex cDNA, R... 85 5e-16
AK155309_1(AK155309|pid:none) Mus musculus NOD-derived CD11c +ve... 82 5e-16
EF144649_1(EF144649|pid:none) Populus trichocarpa clone WS01116_... 89 6e-16
CT573213_3227(CT573213|pid:none) Frankia alni str. ACN14A chromo... 89 6e-16
FN357417_32(FN357417|pid:none) Schistosoma mansoni genome sequen... 89 6e-16
BT052263_1(BT052263|pid:none) Medicago truncatula clone MTYF9_FA... 89 6e-16
AM472330_1(AM472330|pid:none) Vitis vinifera contig VV79X004925.... 89 6e-16
AP003517_26(AP003517|pid:none) Oryza sativa Japonica Group genom... 89 6e-16
(O35353) RecName: Full=Guanine nucleotide-binding protein subuni... 85 6e-16
AY174059_1(AY174059|pid:none) Plasmodium falciparum activated pr... 89 8e-16
FJ943495_1(FJ943495|pid:none) Bombyx mori receptor for activated... 89 8e-16
AM451482_6(AM451482|pid:none) Vitis vinifera contig VV78X165379.... 89 8e-16
AB189027_1(AB189027|pid:none) Plutella xylostella mRNA for recep... 89 8e-16
EF569136_1(EF569136|pid:none) Penaeus monodon receptor for activ... 89 8e-16
U88324_1(U88324|pid:none) Rattus norvegicus G protein beta1 subu... 88 1e-15
(P17343) RecName: Full=Guanine nucleotide-binding protein subuni... 88 1e-15
U61363_1(U61363|pid:none) Mus musculus groucho-related gene 4 pr... 69 1e-15
CP001325_706(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 88 1e-15
AC133571_4(AC133571|pid:none) Medicago truncatula clone mth2-10h... 88 1e-15
AE014298_1183(AE014298|pid:none) Drosophila melanogaster chromos... 88 1e-15
(Q9VZF4) RecName: Full=F-box/WD repeat-containing protein 7; Alt... 88 1e-15
D56695(D56695) transducin-like enhancer-of-split homolog TLE-3 -... 67 2e-15
AM910987_42(AM910987|pid:none) Plasmodium knowlesi strain H chro... 87 2e-15
AC073555_19(AC073555|pid:none) Arabidopsis thaliana chromosome 1... 87 2e-15
(P79959) RecName: Full=Guanine nucleotide-binding protein G(I)/G... 87 2e-15
RGKWB(S09591) GTP-binding regulatory protein beta chain - Caenor... 87 2e-15
AC007259_17(AC007259|pid:none) Arabidopsis thaliana chromosome I... 87 2e-15
GQ223794_1(GQ223794|pid:none) Nicotiana benthamiana heterotrimer... 87 2e-15
EF215228_1(EF215228|pid:none) Callithrix jacchus clone E23-52.1_... 87 2e-15
BT001736_1(BT001736|pid:none) Drosophila melanogaster RE72568 fu... 87 2e-15
AP007169_506(AP007169|pid:none) Aspergillus oryzae RIB40 genomic... 87 2e-15
(Q8H0T9) RecName: Full=Katanin p80 WD40 repeat-containing subuni... 87 2e-15
AL392174_12(AL392174|pid:none) Arabidopsis thaliana DNA chromoso... 87 2e-15
AK122524_1(AK122524|pid:none) Mus musculus mRNA for mKIAA1547 pr... 67 2e-15
AB046767_1(AB046767|pid:none) Homo sapiens mRNA for KIAA1547 pro... 67 2e-15
BC056465_1(BC056465|pid:none) Mus musculus transducin-like enhan... 67 2e-15
S35681(S35681;S34162) ESG protein - mouse &X73360_1(X73360|pid:... 67 2e-15
(Q08122) RecName: Full=Transducin-like enhancer protein 3; AltNa... 67 2e-15
BC041831_1(BC041831|pid:none) Homo sapiens transducin-like enhan... 67 2e-15
(Q04726) RecName: Full=Transducin-like enhancer protein 3; AltNa... 67 2e-15
BC043247_1(BC043247|pid:none) Homo sapiens transducin-like enhan... 67 2e-15
(Q9JIT3) RecName: Full=Transducin-like enhancer protein 3; ... 67 2e-15
AB384233_1(AB384233|pid:none) Synthetic construct DNA, clone: pF... 67 2e-15
AK158785_1(AK158785|pid:none) Mus musculus visual cortex cDNA, R... 67 2e-15
AK096779_1(AK096779|pid:none) Homo sapiens cDNA FLJ39460 fis, cl... 67 2e-15
AY463620_1(AY463620|pid:none) Arabidopsis thaliana TAF5 (At5g251... 86 2e-15
BC148666_1(BC148666|pid:none) Synthetic construct Homo sapiens c... 81 2e-15
BC031227_1(BC031227|pid:none) Homo sapiens WD repeat domain 88, ... 81 2e-15
BC006672_1(BC006672|pid:none) Mus musculus transducin-like enhan... 67 2e-15
AK001258_1(AK001258|pid:none) Homo sapiens cDNA FLJ10396 fis, cl... 67 2e-15
AJ004807_1(AJ004807|pid:none) Nicotiana tabacum xanthi arcA 3 ge... 87 2e-15
AF277161_1(AF277161|pid:none) Ambystoma tigrinum G-protein B1 su... 87 2e-15
AF001687_1(AF001687|pid:none) Homo sapiens U4/U6 snRNP 60 kDa pr... 87 2e-15
(Q26544) RecName: Full=WD repeat-containing protein SL1-17; &U3... 87 2e-15
CP000383_3602(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 87 2e-15
AB264263_1(AB264263|pid:none) Chamaecyparis pisifera CC2196 gene... 87 2e-15
AE2490(AE2490) WD-repeat protein [imported] - Nostoc sp. (strain... 85 2e-15
AK298482_1(AK298482|pid:none) Homo sapiens cDNA FLJ58800 complet... 67 3e-15
BC162533_1(BC162533|pid:none) Danio rerio groucho 2, mRNA (cDNA ... 67 3e-15
AB236415_1(AB236415|pid:none) Takifugu rubripes TLE3 mRNA for tr... 67 3e-15
CU633438_311(CU633438|pid:none) Podospora anserina genomic DNA c... 86 3e-15
M99439_1(M99439|pid:none) Human transducin-like enhancer protein... 67 3e-15
(Q5R5W8) RecName: Full=Guanine nucleotide-binding protein G(I)/G... 87 3e-15
BT052685_1(BT052685|pid:none) Medicago truncatula clone MTYFD_FE... 87 3e-15
BC114618_1(BC114618|pid:none) Homo sapiens guanine nucleotide bi... 87 3e-15
CP000249_3378(CP000249|pid:none) Frankia sp. CcI3, complete geno... 87 3e-15
U34958_1(U34958|pid:none) Rat G protein beta 1 subunit mRNA, com... 87 3e-15
DQ885470_1(DQ885470|pid:none) Blattella germanica receptor for a... 87 3e-15
AB071106_1(AB071106|pid:none) Macaca fascicularis testis cDNA cl... 87 3e-15
EU906910_1(EU906910|pid:none) Phaseolus vulgaris Rack (RACK) mRN... 87 3e-15
AP003224_20(AP003224|pid:none) Oryza sativa Japonica Group genom... 87 3e-15
(Q7KNS3) RecName: Full=Lissencephaly-1 homolog; Short=L... 85 4e-15
AF098070_1(AF098070|pid:none) Drosophila melanogaster Lis1 homol... 85 4e-15
CP001323_695(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 86 4e-15
CP001323_694(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 86 4e-15
(Q39836) RecName: Full=Guanine nucleotide-binding protein subuni... 86 4e-15
AF391290_3(AF391290|pid:none) Branchiostoma floridae cosmid MPMG... 86 4e-15
(P49027) RecName: Full=Guanine nucleotide-binding protein subuni... 86 4e-15
CP001344_1358(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 86 4e-15
AY457171_1(AY457171|pid:none) Leishmania amazonensis antigenic W... 86 4e-15
BC059405_1(BC059405|pid:none) Homo sapiens transducin-like enhan... 67 5e-15
AB033087_1(AB033087|pid:none) Homo sapiens mRNA for KIAA1261 pro... 67 5e-15
BC133368_1(BC133368|pid:none) Bos taurus transducin-like enhance... 67 5e-15
(Q62441) RecName: Full=Transducin-like enhancer protein 4; AltNa... 67 5e-15
AB080584_1(AB080584|pid:none) Gallus gallus Grg4 mRNA, complete ... 67 5e-15
(O42478) RecName: Full=Transducin-like enhancer protein 4; AltNa... 67 5e-15
AF229633_1(AF229633|pid:none) Mus musculus groucho-related prote... 67 5e-15
AJ224945_1(AJ224945|pid:none) Xenopus laevis Grg-4 clone mRNA fo... 67 5e-15
AK296342_1(AK296342|pid:none) Homo sapiens cDNA FLJ58005 complet... 67 5e-15
BC045650_1(BC045650|pid:none) Homo sapiens transducin-like enhan... 67 5e-15
CP000581_540(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 73 5e-15
AK057236_1(AK057236|pid:none) Homo sapiens cDNA FLJ32674 fis, cl... 67 5e-15
CP000119_93(CP000119|pid:none) Anabaena variabilis ATCC 29413 pl... 83 5e-15
AF501886_1(AF501886|pid:none) Mus musculus guanine nucleotide bi... 84 5e-15
(P49026) RecName: Full=Guanine nucleotide-binding protein subuni... 86 5e-15
DQ073455_1(DQ073455|pid:none) Choristoneura fumiferana activated... 86 5e-15
AB180753_1(AB180753|pid:none) Cyprinus carpio Gbeta1 mRNA for G-... 86 5e-15
BT044874_1(BT044874|pid:none) Salmo salar clone ssal-rgf-506-090... 86 5e-15
AY737531_1(AY737531|pid:none) Toxoptera citricida putative activ... 86 5e-15
AM778930_22(AM778930|pid:none) Microcystis aeruginosa PCC 7806 g... 86 5e-15
(Q42384) RecName: Full=PP1/PP2A phosphatases pleiotropic regulat... 86 5e-15
AB493682_1(AB493682|pid:none) Arabidopsis thaliana At4g15900 mRN... 86 5e-15
FN357364_26(FN357364|pid:none) Schistosoma mansoni genome sequen... 86 5e-15
AB264266_1(AB264266|pid:none) Chamaecyparis obtusa CC2196 gene f... 86 5e-15
BT045938_1(BT045938|pid:none) Salmo salar clone ssal-rgf-537-081... 86 5e-15
EU752715_1(EU752715|pid:none) Populus tremula isolate swl35-3 U5... 82 5e-15
(Q93794) RecName: Full=F-box/WD repeat-containing protein sel-10... 84 6e-15
T22703(T22703)hypothetical protein F55B12.3 - Caenorhabditis ele... 84 6e-15
CR761620_1(CR761620|pid:none) Xenopus tropicalis finished cDNA, ... 86 7e-15
BC135354_1(BC135354|pid:none) Xenopus tropicalis hypothetical pr... 86 7e-15
EU952736_1(EU952736|pid:none) Zea mays clone 1287276 guanine nuc... 86 7e-15
BT055706_1(BT055706|pid:none) Zea mays full-length cDNA clone ZM... 86 7e-15
X03073_1(X03073|pid:none) Bovine retinal mRNA for transducin bet... 86 7e-15
BC074250_1(BC074250|pid:none) Xenopus laevis MGC84000 protein, m... 86 7e-15
BC075548_1(BC075548|pid:none) Xenopus tropicalis MGC89488 protei... 86 7e-15
FN357341_7(FN357341|pid:none) Schistosoma mansoni genome sequenc... 86 7e-15
CP000117_4784(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 86 7e-15
AM502224_3(AM502224|pid:none) Leishmania infantum chromosome 6. 86 7e-15
(Q07141) RecName: Full=Transducin-like enhancer protein 4; AltNa... 65 8e-15
BT037560_1(BT037560|pid:none) Zea mays full-length cDNA clone ZM... 80 8e-15
EU752714_1(EU752714|pid:none) Populus tremula isolate swl35-3 U5... 81 9e-15
DQ122897_1(DQ122897|pid:none) Chlamydomonas incerta G protein be... 85 9e-15
U96491_1(U96491|pid:none) Drosophila melanogaster RACK1 (rack1) ... 85 9e-15
(P25387) RecName: Full=Guanine nucleotide-binding protein subuni... 85 9e-15
BT064699_1(BT064699|pid:none) Zea mays full-length cDNA clone ZM... 85 9e-15
AE014296_3092(AE014296|pid:none) Drosophila melanogaster chromos... 85 9e-15
BC085387_1(BC085387|pid:none) Danio rerio zgc:101614, mRNA (cDNA... 85 9e-15
AC087851_1(AC087851|pid:none) Oryza sativa chromosome 3 BAC OSJN... 85 9e-15
AK111863_1(AK111863|pid:none) Oryza sativa Japonica Group cDNA c... 85 9e-15
BT037412_1(BT037412|pid:none) Zea mays full-length cDNA clone ZM... 81 1e-14
EU752724_1(EU752724|pid:none) Populus tremula isolate swl35-63 U... 81 1e-14
(Q58D20) RecName: Full=Notchless protein homolog 1; 85 1e-14
(O15736) RecName: Full=Protein tipD; &AF019236_1(AF019236|pid:n... 85 1e-14

>AM920427_459(AM920427|pid:none) Penicillium chrysogenum Wisconsin
54-1255 complete genome, contig Pc00c12.
Length = 589

Score = 244 bits (623), Expect(3) = e-103
Identities = 128/229 (55%), Positives = 152/229 (66%), Gaps = 11/229 (4%)
Frame = +2

Query: 1265 LFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAM 1444
+F GHE DIYSLD++ +GRFI SGSGDK ++WDI GK +TL E+ GVT+VAM
Sbjct: 367 IFSGHEQDIYSLDFAGNGRFIASGSGDKTVRLWDILDGKLVYTLSIED-----GVTTVAM 421

Query: 1445 SPDGRLVAAGSLDNIVRLWDAQTGYFLERYE---GHLDSVYSVAFSPDGKSLAXXXXXXX 1615
SPDGR VAAGSLD VR+WD TGY +ER E GH DSVYSVAF+P+G+ L
Sbjct: 422 SPDGRYVAAGSLDKSVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGRDLVSGSLDKT 481

Query: 1616 XXXXXXXXXRS--------RSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDP 1771
R +C TF GHKDFVLSV +PDG+W++SGSKDR VQFWDP
Sbjct: 482 IKLWELTVPRGIHPHSAIKGGKCIRTFEGHKDFVLSVCLTPDGAWVMSGSKDRGVQFWDP 541

Query: 1772 RNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLWKYDS*T 1918
G MMLQGHKNSVISVA SP N +FATGSGD R+R+W+Y + T
Sbjct: 542 VTGNAQMMLQGHKNSVISVAPSPTGN---LFATGSGDMRARIWRYSAYT 587

Score = 142 bits (358), Expect(3) = e-103
Identities = 66/97 (68%), Positives = 79/97 (81%), Gaps = 1/97 (1%)
Frame = +3

Query: 897 KEKGTDWLVGYNPSVQTNLNIDLLHNLQHNSVVCCVNFSNDGKYLATGCNRSAQIYDVDT 1076
K +G+DW +NP VQ L+++L+H+L H+SVVCCV FS DGKYLATGCNRSAQI+DV T
Sbjct: 254 KREGSDWYAVFNPEVQRVLDVELVHHLNHDSVVCCVRFSRDGKYLATGCNRSAQIFDVTT 313

Query: 1077 GKKVHAFVDES-EKDGDLYIRSVCFSPDGNYLATGAE 1184
G+ V DE+ +KDGDLYIRSVCFSPDG YLATGAE
Sbjct: 314 GQNVATLQDENVDKDGDLYIRSVCFSPDGKYLATGAE 350

Score = 36.2 bits (82), Expect(3) = e-103
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +1

Query: 1198 LATGAEDKTVKVWDIHTKKIQH 1263
LATGAEDK ++VWDI+ + I+H
Sbjct: 345 LATGAEDKQIRVWDINQRTIKH 366

Score = 96.7 bits (239), Expect = 3e-18
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 6/215 (2%)
Frame = +2

Query: 1277 HELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNG---VTSVAMS 1447
H+ + + +S DG+++ +G ++ A+I+D+ G+ TL +E V K+G + SV S
Sbjct: 282 HDSVVCCVRFSRDGKYLATGC-NRSAQIFDVTTGQNVATLQDENVD-KDGDLYIRSVCFS 339

Query: 1448 PDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLAXXXXXXXXXXX 1627
PDG+ +A G+ D +R+WD + GH +YS+ F+ +G+ +A
Sbjct: 340 PDGKYLATGAEDKQIRVWDINQRTIKHIFSGHEQDIYSLDFAGNGRFIASGSGDKTVRLW 399

Query: 1628 XXXXXRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQ-- 1801
+ +D V +VA SPDG ++ +GS D+SV+ WD G L+
Sbjct: 400 DILDGKLVYTLSI-----EDGVTTVAMSPDGRYVAAGSLDKSVRVWDTTTGYLVERLENP 454

Query: 1802 -GHKNSVISVALSPKNNSHGVFATGSGDFRSRLWK 1903
GHK+SV SVA +P +GS D +LW+
Sbjct: 455 DGHKDSVYSVAFAPNGRD---LVSGSLDKTIKLWE 486

Score = 57.4 bits (137), Expect = 2e-06
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Frame = +3

Query: 159 ARASELLDNLKGEIDALNHELSLYKHQKDDYERKFQNQLAELNTIQQTLYDLERGQNKMK 338
+R +ELLD L+ E ++ + ++HQ QL E+ I+Q +Y LE+ Q K+K
Sbjct: 14 SRLTELLDQLRQEFESQSRNTGEFEHQ-------LTGQLQEMEMIRQKVYQLEQAQIKIK 66

Query: 339 IHYEEEIRQLKRQLEQQNINASQRDLNSPS---TFRSNSPAPPAQH 467
YE EIR L+ +LE + + + P+ T + +P P H
Sbjct: 67 QDYEAEIRMLRHELESRGVQTIPSHIGGPAAAHTAPAQAPPPALGH 112

Score = 38.9 bits (89), Expect(2) = 0.027
Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +3

Query: 981 HNSVVCCVNFSNDGKYLATGC-NRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 1157
H + ++F+ +G+++A+G +++ +++D+ GK V+ S +DG + +V SPD
Sbjct: 371 HEQDIYSLDFAGNGRFIASGSGDKTVRLWDILDGKLVYTL---SIEDG---VTTVAMSPD 424

Query: 1158 GNYLATGA 1181
G Y+A G+
Sbjct: 425 GRYVAAGS 432

Score = 23.9 bits (50), Expect(2) = 0.027
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1

Query: 1198 LATGAEDKTVKVWDIHT 1248
+A G+ DK+V+VWD T
Sbjct: 428 VAAGSLDKSVRVWDTTT 444

Score = 37.0 bits (84), Expect(2) = 0.13
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +3

Query: 963 LLHNLQHNSVVCCVNFSNDGKYLATG-CNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRS 1139
L++ L V V S DG+Y+A G ++S +++D TG V + +Y S
Sbjct: 406 LVYTLSIEDGVTTVAMSPDGRYVAAGSLDKSVRVWDTTTGYLVERLENPDGHKDSVY--S 463

Query: 1140 VCFSPDGNYLATGA 1181
V F+P+G L +G+
Sbjct: 464 VAFAPNGRDLVSGS 477

Score = 23.5 bits (49), Expect(2) = 0.13
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = +1

Query: 1198 LATGAEDKTVKVWDI 1242
L +G+ DKT+K+W++
Sbjct: 473 LVSGSLDKTIKLWEL 487

Score = 31.2 bits (69), Expect(2) = 0.16
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2

Query: 1262 ILFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIW 1363
++ GH+ + S+ S G +GSGD +A+IW
Sbjct: 548 MMLQGHKNSVISVAPSPTGNLFATGSGDMRARIW 581

Score = 28.9 bits (63), Expect(2) = 0.16
Identities = 18/79 (22%), Positives = 40/79 (50%), Gaps = 11/79 (13%)
Frame = +3

Query: 981 HNSVVCCVNFSNDGKYLATGC-NRSAQIYDVDTGKKVHAF----------VDESEKDGDL 1127
H V V F+ +G+ L +G +++ +++++ + +H E KD
Sbjct: 457 HKDSVYSVAFAPNGRDLVSGSLDKTIKLWELTVPRGIHPHSAIKGGKCIRTFEGHKD--- 513

Query: 1128 YIRSVCFSPDGNYLATGAE 1184
++ SVC +PDG ++ +G++
Sbjct: 514 FVLSVCLTPDGAWVMSGSK 532

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,822,683,582
Number of extensions: 53763762
Number of successful extensions: 233513
Number of sequences better than 10.0: 4120
Number of HSP's gapped: 211407
Number of HSP's successfully gapped: 17350
Length of query: 666
Length of database: 1,040,966,779
Length adjustment: 135
Effective length of query: 531
Effective length of database: 608,388,304
Effective search space: 323054189424
Effective search space used: 323054189424
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.71 gvh: 0.37 alm: 0.51 top: 0.53 tms: 0.00 mit: 0.39 mip: 0.04
nuc: 0.09 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

56.0 %: mitochondrial
16.0 %: cytoplasmic
16.0 %: nuclear
8.0 %: cytoskeletal
4.0 %: peroxisomal

>> prediction for Contig-U10711-1 is mit

VS (DIR, S) 1
VH (FL, L) 2
VF (FL, S) 0
AH (FL, L) 3
AF (FL, S) 8
SL (DIR, L) 7
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 6
CF (FL, S) 3
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0