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Dicty_cDB
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U10654-1
Contig ID Contig-U10654-1
Contig update 2002. 9.13
Contig sequence 
>Contig-U10654-1 (Contig-U10654-1Q) /CSM_Contig/Contig-U10654-1Q.Seq.d
ATTTAGTATTTGATGAAGCAGATAAATTATTTGATAAGAATTTCCAAGAA
CAAGTTGATATTGTTGTAACAGCATGTCAAAATCCAAAATTAAAGATTTG
TTTATTCAGTGCCACTATGAATCAACAAGTTGAGGAATTGGGTCATTCAA
TTATGAAAAATCCAATAAAGATTATAATTGGTGAACAAAATGCTGCAGCA
ATTACAGTTGATCAAAAATTAATTTATGTTGGTAAAGAGGAGGGAAAGTT
ATTGGCAGTTAGACAATTGATTCAAAAAGGTTTAGAACCACCCATTTTAA
TATTCACTCAATCTAAAGAGAGAGCACATGATTTATTCCAAGAGTTGATT
TTCGATGGTATCAATGTTGATGTAATTCATTCAGAGAGAACTCAATTCCA
AAGAGACACAATCGTAAAGAAATTCCGTATGGGTAAGATTTGGGTACTAA
TTTGCACAGAGTTGATGGCAAGAGGTATGGATTTCAAAGGTGTCAATTTC
GTTATTAATTTCGATTTCCCTCATACCCTCGCTTCATACATTCACAGAAT
TGGTAGAACTGGTCGTGCTGGTAGACCTGGTGTAGCATATACCCTCCTAC
ACCGATGCCGATACTCCAATGTTACCAACCATCGTTCATGCTATGAAACA
ATCTGGTTCTCATGTTCCAGATTGGATGTTAAATCTAAAAGTTCAAGGTA
AAAAGAAACAACAATATAGATTAAAAGGTGTTGAAAGGGAATCATTTTCA
ACGATTCCCCTTAGTGAAAGAACTTCTTCAAAATTCAAACTTAGAAAAAA
TAAAAAATCTTTCAATTTACCTGGTGATCAACAAAAATCAAATGAAAATA
ATAACAATAATAATAATNATNATAATGATAATAAAAAAAGAAAATCTTTN
AATAATAATGGTAAACAAATCATAATCCANAAAGAAAACAAANTCAAATC
AAAAAACCAAAAAAAAAAAAAAAAAA
Gap no gap
Contig length 976
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 3940392
End point 3941369
Strand (PLUS/MINUS) PLUS
Number of clones 2
Number of EST 2
Link to clone list U10654
List of clone(s) 

est1=VSK145E,1,977
est2=VFM737Z,67,821
Translated Amino Acid sequence 
LVFDEADKLFDKNFQEQVDIVVTACQNPKLKICLFSATMNQQVEELGHSIMKNPIKIIIG
EQNAAAITVDQKLIYVGKEEGKLLAVRQLIQKGLEPPILIFTQSKERAHDLFQELIFDGI
NVDVIHSERTQFQRDTIVKKFRMGKIWVLICTELMARGMDFKGVNFVINFDFPHTLASYI
HRIGRTGRAGRPGVAYTLLHRCRYSNVTNHRSCYETIWFSCSRLDVKSKSSR*ketti*i
krc*kgiifndsp**knffkiqt*kk*kifqftw*stkik*k**q***xx****kkkifx
**w*tnhnpxrkqxqikkpkkkkk
Translated Amino Acid sequence (All Frames) 
Frame A:
i*ylmkqinylirisknklill*qhvkiqn*rfvysvpl*inklrnwviql*kiq*rl*l
vnkmlqqlqlikn*fmlvkrresywqldn*fkkv*nhpf*yslnlkrehmiysks*fsmv
smlm*fiqrelnsketqs*rnsvwvrfgy*faqs*wqevwiskvsisllisislipslht
ftelvelvvlvdlv*hipsytdadtpmlptivhamkqsgshvpdwmlnlkvqgkkkqqyr
lkgveresfstiplsertsskfklrknkksfnlpgdqqksnennnnnnnxxndnkkrksx
nnngkqiiixkenkxksknqkkkkk


Frame B:
fsi**sr*ii**efprts*yccnsmskskikdlfiqchyests*gigsfnyeksnkdynw
*tkccsnys*skinlcw*rggkvigs*tidskrfrtthfnihsi*rest*fiprvdfrwy
qc*cnsfrensipkrhnrkeipyg*dlgtnlhrvdgkrygfqrcqfry*frfpsyprfih
sqnw*nwscw*twcsiypptpmpilqcyqpsfml*nnlvlmfqigc*i*kfkvkrnnnid
*kvlkgnhfqrfplvkellqnsnlekiknlsiylvinknqmkiitiiixximiikkenlx
iimvnks*sxkktxsnqktkkkkkk


Frame C:
LVFDEADKLFDKNFQEQVDIVVTACQNPKLKICLFSATMNQQVEELGHSIMKNPIKIIIG
EQNAAAITVDQKLIYVGKEEGKLLAVRQLIQKGLEPPILIFTQSKERAHDLFQELIFDGI
NVDVIHSERTQFQRDTIVKKFRMGKIWVLICTELMARGMDFKGVNFVINFDFPHTLASYI
HRIGRTGRAGRPGVAYTLLHRCRYSNVTNHRSCYETIWFSCSRLDVKSKSSR*ketti*i
krc*kgiifndsp**knffkiqt*kk*kifqftw*stkik*k**q***xx****kkkifx
**w*tnhnpxrkqxqikkpkkkkk
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U10654-1 (Contig-U10654-1Q)
/CSM_Contig/Contig-U10654-1Q.Seq.d
         (976 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U10654-1 (Contig-U10654-1Q) /CSM_Contig/Conti...  1574  0.0
Contig-U12305-1 (Contig-U12305-1Q) /CSM_Contig/Conti...    54  3e-07
Contig-U12463-1 (Contig-U12463-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U03803-1 (Contig-U03803-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U11722-1 (Contig-U11722-1Q) /CSM_Contig/Conti...    38  0.017
Contig-U11277-1 (Contig-U11277-1Q) /CSM_Contig/Conti...    36  0.069
Contig-U09012-1 (Contig-U09012-1Q) /CSM_Contig/Conti...    36  0.069
Contig-U06785-1 (Contig-U06785-1Q) /CSM_Contig/Conti...    36  0.069
Contig-U13893-1 (Contig-U13893-1Q) /CSM_Contig/Conti...    34  0.27
Contig-U13027-1 (Contig-U13027-1Q) /CSM_Contig/Conti...    34  0.27

>Contig-U10654-1 (Contig-U10654-1Q) /CSM_Contig/Contig-U10654-1Q.Seq.d
          Length = 976

 Score = 1574 bits (794), Expect = 0.0
 Identities = 794/794 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atttagtatttgatgaagcagataaattatttgataagaatttccaagaacaagttgata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atttagtatttgatgaagcagataaattatttgataagaatttccaagaacaagttgata 60

                                                                       
Query: 61  ttgttgtaacagcatgtcaaaatccaaaattaaagatttgtttattcagtgccactatga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttgttgtaacagcatgtcaaaatccaaaattaaagatttgtttattcagtgccactatga 120

                                                                       
Query: 121 atcaacaagttgaggaattgggtcattcaattatgaaaaatccaataaagattataattg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcaacaagttgaggaattgggtcattcaattatgaaaaatccaataaagattataattg 180

                                                                       
Query: 181 gtgaacaaaatgctgcagcaattacagttgatcaaaaattaatttatgttggtaaagagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgaacaaaatgctgcagcaattacagttgatcaaaaattaatttatgttggtaaagagg 240

                                                                       
Query: 241 agggaaagttattggcagttagacaattgattcaaaaaggtttagaaccacccattttaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agggaaagttattggcagttagacaattgattcaaaaaggtttagaaccacccattttaa 300

                                                                       
Query: 301 tattcactcaatctaaagagagagcacatgatttattccaagagttgattttcgatggta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tattcactcaatctaaagagagagcacatgatttattccaagagttgattttcgatggta 360

                                                                       
Query: 361 tcaatgttgatgtaattcattcagagagaactcaattccaaagagacacaatcgtaaaga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcaatgttgatgtaattcattcagagagaactcaattccaaagagacacaatcgtaaaga 420

                                                                       
Query: 421 aattccgtatgggtaagatttgggtactaatttgcacagagttgatggcaagaggtatgg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aattccgtatgggtaagatttgggtactaatttgcacagagttgatggcaagaggtatgg 480

                                                                       
Query: 481 atttcaaaggtgtcaatttcgttattaatttcgatttccctcataccctcgcttcataca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atttcaaaggtgtcaatttcgttattaatttcgatttccctcataccctcgcttcataca 540

                                                                       
Query: 541 ttcacagaattggtagaactggtcgtgctggtagacctggtgtagcatataccctcctac 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttcacagaattggtagaactggtcgtgctggtagacctggtgtagcatataccctcctac 600

                                                                       
Query: 601 accgatgccgatactccaatgttaccaaccatcgttcatgctatgaaacaatctggttct 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 accgatgccgatactccaatgttaccaaccatcgttcatgctatgaaacaatctggttct 660

                                                                       
Query: 661 catgttccagattggatgttaaatctaaaagttcaaggtaaaaagaaacaacaatataga 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 catgttccagattggatgttaaatctaaaagttcaaggtaaaaagaaacaacaatataga 720

                                                                       
Query: 721 ttaaaaggtgttgaaagggaatcattttcaacgattccccttagtgaaagaacttcttca 780
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttaaaaggtgttgaaagggaatcattttcaacgattccccttagtgaaagaacttcttca 780

                         
Query: 781 aaattcaaacttag 794
           ||||||||||||||
Sbjct: 781 aaattcaaacttag 794


 Score =  103 bits (52), Expect = 4e-22
 Identities = 61/61 (100%)
 Strand = Plus / Plus

                                                                       
Query: 890 gaaaatctttnaataataatggtaaacaaatcataatccanaaagaaaacaaantcaaat 949
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 gaaaatctttnaataataatggtaaacaaatcataatccanaaagaaaacaaantcaaat 949

            
Query: 950 c 950
           |
Sbjct: 950 c 950


 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 808 tctttcaatttacctggtgatcaac 832
           |||||||||||||||||||||||||
Sbjct: 808 tctttcaatttacctggtgatcaac 832


>Contig-U12305-1 (Contig-U12305-1Q) /CSM_Contig/Contig-U12305-1Q.Seq.d
          Length = 1738

 Score = 54.0 bits (27), Expect = 3e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                       
Query: 540  attcacagaattggtagaactggtcgt 566
            |||||||||||||||||||||||||||
Sbjct: 1400 attcacagaattggtagaactggtcgt 1426


>Contig-U12463-1 (Contig-U12463-1Q) /CSM_Contig/Contig-U12463-1Q.Seq.d
          Length = 774

 Score = 42.1 bits (21), Expect = 0.001
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 537 tacattcacagaattggtagaactggtcgtgctggta 573
           |||||||||||| ||||| | |||| |||||||||||
Sbjct: 173 tacattcacagagttggtcgtactgctcgtgctggta 209


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,046
Number of Sequences: 6905
Number of extensions: 11046
Number of successful extensions: 1272
Number of sequences better than 10.0: 129
length of query: 976
length of database: 5,674,871
effective HSP length: 16
effective length of query: 960
effective length of database: 5,564,391
effective search space: 5341815360
effective search space used: 5341815360
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.21
Homology vs DNA 
Query= Contig-U10654-1 (Contig-U10654-1Q) /CSM_Contig/Contig-U10654-1Q.Seq.d
         (976 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AC116986) Dictyostelium discoideum chromosome 2 map 2234041...  1181   0.0    2
(AU270710) Dictyostelium discoideum vegetative cDNA clone:VS...  1134   0.0    1
(BJ435191) Dictyostelium discoideum cDNA clone:ddv26j09, 3' ...  1037   0.0    2
(AU270711) Dictyostelium discoideum vegetative cDNA clone:VS...   387   e-160  2
(DW271809) UI-S-GS1-acl-o-19-0-UI.s1 UI-S-GS1 Euprymna scolo...    50   4e-11  3
(DW268054) UI-S-GN1-aby-d-22-0-UI.s1 UI-S-GN1 Euprymna scolo...    50   5e-11  3
(DW256569) UI-S-GB1-aap-a-05-0-UI.s1 UI-S-GB1 Euprymna scolo...    50   6e-11  3
(DW273630) UI-S-GS1-act-k-21-0-UI.s1 UI-S-GS1 Euprymna scolo...    46   8e-10  3
(AF140505) Candida albicans DEAD box RNA helicase (CHR1) gen...    38   5e-09  5
(AL408531) T7 end of clone AV0AA009B03 of library AV0AA from...    38   7e-09  4
(FE264915) CAZO4149.rev CAZO Naegleria gruberi Flagellate St...    74   1e-08  1
(FE259446) CAPH7696.rev CAPH Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE258878) CAPH7379.fwd CAPH Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE258877) CAPH7379.rev CAPH Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE258848) CAPH7362.fwd CAPH Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE258822) CAPH7347.fwd CAPH Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE258368) CAPH7109.fwd CAPH Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE258367) CAPH7109.rev CAPH Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE257332) CAPH6571.fwd CAPH Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE257331) CAPH6571.rev CAPH Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE256321) CAPH6053.fwd CAPH Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE256320) CAPH6053.rev CAPH Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE254266) CAPH4964.rev CAPH Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE252476) CAPH4035.fwd CAPH Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE252475) CAPH4035.rev CAPH Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE251804) CAPH3665.fwd CAPH Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE251803) CAPH3665.rev CAPH Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE250516) CAPH2898.fwd CAPH Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE250515) CAPH2898.rev CAPH Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE247350) CAPG9904.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE247254) CAPG9855.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE247247) CAPG9851.fwd CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE247246) CAPG9851.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE247142) CAPG9795.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE247122) CAPG9784.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE247086) CAPG9766.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE247058) CAPG9751.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE245145) CAPG8652.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE245083) CAPG8601.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE244816) CAPG8403.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE244074) CAPG7996.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE243285) CAPG7571.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE243083) CAPG7475.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE243059) CAPG7464.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE242832) CAPG7356.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE242604) CAPG7245.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE242172) CAPG7040.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE241775) CAPG6849.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE241235) CAPG6585.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE241078) CAPG633.rev CAPG Naegleria gruberi amoeba stage N...    74   1e-08  1
(FE240107) CAPG5692.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE239314) CAPG5298.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE238839) CAPG5057.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE238454) CAPG4863.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE238397) CAPG4837.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE238001) CAPG4643.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE237859) CAPG4573.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE237676) CAPG4489.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE237326) CAPG4322.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE236555) CAPG3948.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE236521) CAPG393.rev CAPG Naegleria gruberi amoeba stage N...    74   1e-08  1
(FE236337) CAPG3841.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE236255) CAPG3797.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE235592) CAPG3445.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE235131) CAPG3193.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE234602) CAPG2913.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE233896) CAPG2528.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE233719) CAPG2433.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE233714) CAPG2430.fwd CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE233713) CAPG2430.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE233492) CAPG2315.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE233338) CAPG2233.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE232947) CAPG2021.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE232877) CAPG1984.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE232771) CAPG1929.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE231791) CAPG1407.rev CAPG Naegleria gruberi amoeba stage ...    74   1e-08  1
(FE257083) CAPH644.fwd CAPH Naegleria gruberi amoeba stage N...    66   3e-06  1
(FE255984) CAPH5876.fwd CAPH Naegleria gruberi amoeba stage ...    66   3e-06  1
(FE255983) CAPH5876.rev CAPH Naegleria gruberi amoeba stage ...    66   3e-06  1
(FE253072) CAPH4340.fwd CAPH Naegleria gruberi amoeba stage ...    66   3e-06  1
(FE253071) CAPH4340.rev CAPH Naegleria gruberi amoeba stage ...    66   3e-06  1
(FE252697) CAPH4149.fwd CAPH Naegleria gruberi amoeba stage ...    66   3e-06  1
(FE252696) CAPH4149.rev CAPH Naegleria gruberi amoeba stage ...    66   3e-06  1
(FE247002) CAPG9720.rev CAPG Naegleria gruberi amoeba stage ...    66   3e-06  1
(FE246826) CAPG9625.rev CAPG Naegleria gruberi amoeba stage ...    66   3e-06  1
(FE246488) CAPG9447.rev CAPG Naegleria gruberi amoeba stage ...    66   3e-06  1
(FE245643) CAPG8987.rev CAPG Naegleria gruberi amoeba stage ...    66   3e-06  1
(FE243392) CAPG7623.rev CAPG Naegleria gruberi amoeba stage ...    66   3e-06  1
(FE242232) CAPG707.rev CAPG Naegleria gruberi amoeba stage N...    66   3e-06  1
(FE241251) CAPG6593.rev CAPG Naegleria gruberi amoeba stage ...    66   3e-06  1
(FE240631) CAPG5945.rev CAPG Naegleria gruberi amoeba stage ...    66   3e-06  1
(FE238627) CAPG495.rev CAPG Naegleria gruberi amoeba stage N...    66   3e-06  1
(FE237588) CAPG4447.rev CAPG Naegleria gruberi amoeba stage ...    66   3e-06  1
(FE237449) CAPG4380.rev CAPG Naegleria gruberi amoeba stage ...    66   3e-06  1
(FE236658) CAPG3997.rev CAPG Naegleria gruberi amoeba stage ...    66   3e-06  1
(FE234873) CAPG3054.rev CAPG Naegleria gruberi amoeba stage ...    66   3e-06  1
(FE234409) CAPG2809.rev CAPG Naegleria gruberi amoeba stage ...    66   3e-06  1
(FE234287) CAPG2742.rev CAPG Naegleria gruberi amoeba stage ...    66   3e-06  1
(FE233063) CAPG2083.rev CAPG Naegleria gruberi amoeba stage ...    66   3e-06  1
(FE231034) CAPG10159.rev CAPG Naegleria gruberi amoeba stage...    66   3e-06  1

>(AC116986) Dictyostelium discoideum chromosome 2 map 2234041-2567370
              strain AX4, complete sequence.
          Length = 333321

 Score = 1181 bits (596), Expect(2) = 0.0
 Identities = 596/596 (100%)
 Strand = Plus / Minus


Query: 1      atttagtatttgatgaagcagataaattatttgataagaatttccaagaacaagttgata 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144052 atttagtatttgatgaagcagataaattatttgataagaatttccaagaacaagttgata 143993


Query: 61     ttgttgtaacagcatgtcaaaatccaaaattaaagatttgtttattcagtgccactatga 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143992 ttgttgtaacagcatgtcaaaatccaaaattaaagatttgtttattcagtgccactatga 143933


Query: 121    atcaacaagttgaggaattgggtcattcaattatgaaaaatccaataaagattataattg 180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143932 atcaacaagttgaggaattgggtcattcaattatgaaaaatccaataaagattataattg 143873


Query: 181    gtgaacaaaatgctgcagcaattacagttgatcaaaaattaatttatgttggtaaagagg 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143872 gtgaacaaaatgctgcagcaattacagttgatcaaaaattaatttatgttggtaaagagg 143813


Query: 241    agggaaagttattggcagttagacaattgattcaaaaaggtttagaaccacccattttaa 300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143812 agggaaagttattggcagttagacaattgattcaaaaaggtttagaaccacccattttaa 143753


Query: 301    tattcactcaatctaaagagagagcacatgatttattccaagagttgattttcgatggta 360
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143752 tattcactcaatctaaagagagagcacatgatttattccaagagttgattttcgatggta 143693


Query: 361    tcaatgttgatgtaattcattcagagagaactcaattccaaagagacacaatcgtaaaga 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143692 tcaatgttgatgtaattcattcagagagaactcaattccaaagagacacaatcgtaaaga 143633


Query: 421    aattccgtatgggtaagatttgggtactaatttgcacagagttgatggcaagaggtatgg 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143632 aattccgtatgggtaagatttgggtactaatttgcacagagttgatggcaagaggtatgg 143573


Query: 481    atttcaaaggtgtcaatttcgttattaatttcgatttccctcataccctcgcttcataca 540
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143572 atttcaaaggtgtcaatttcgttattaatttcgatttccctcataccctcgcttcataca 143513


Query: 541    ttcacagaattggtagaactggtcgtgctggtagacctggtgtagcatataccctc 596
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143512 ttcacagaattggtagaactggtcgtgctggtagacctggtgtagcatataccctc 143457

 Score =  392 bits (198), Expect(2) = 0.0
 Identities = 198/198 (100%)
 Strand = Plus / Minus


Query: 597    ctacaccgatgccgatactccaatgttaccaaccatcgttcatgctatgaaacaatctgg 656
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143457 ctacaccgatgccgatactccaatgttaccaaccatcgttcatgctatgaaacaatctgg 143398


Query: 657    ttctcatgttccagattggatgttaaatctaaaagttcaaggtaaaaagaaacaacaata 716
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143397 ttctcatgttccagattggatgttaaatctaaaagttcaaggtaaaaagaaacaacaata 143338


Query: 717    tagattaaaaggtgttgaaagggaatcattttcaacgattccccttagtgaaagaacttc 776
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143337 tagattaaaaggtgttgaaagggaatcattttcaacgattccccttagtgaaagaacttc 143278


Query: 777    ttcaaaattcaaacttag 794
              ||||||||||||||||||
Sbjct: 143277 ttcaaaattcaaacttag 143260

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 942,740,112
Number of extensions: 54199131
Number of successful extensions: 4335130
Number of sequences better than 10.0: 378
Length of query: 976
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 952
Effective length of database: 97,308,875,965
Effective search space: 92638049918680
Effective search space used: 92638049918680
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 6.28
Homology vs Protein 
Query= Contig-U10654-1 (Contig-U10654-1Q) /CSM_Contig/Contig-U10654-1Q.Seq.d
         (976 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q86IZ9) RecName: Full=Probable ATP-dependent RNA helicase ddx52...   395   e-152
(Q6FN65) RecName: Full=ATP-dependent RNA helicase ROK1;         ...   239   3e-68
(Q75AE1) RecName: Full=ATP-dependent RNA helicase ROK1;         ...   242   8e-68
CU928180_364(CU928180|pid:none) Kluyveromyces thermotolerans str...   242   9e-67
(P45818) RecName: Full=ATP-dependent RNA helicase ROK1;         ...   240   2e-66
(A7TT88) RecName: Full=ATP-dependent RNA helicase ROK1;         ...   231   3e-66
AC124963_19(AC124963|pid:none) Medicago truncatula clone mth2-24...   223   3e-65
FN392321_837(FN392321|pid:none) Pichia pastoris GS115 chromosome...   239   3e-65
EF121976_1(EF121976|pid:none) Rattus norvegicus strain LEW ATP-d...   227   3e-64
AK001652_1(AK001652|pid:none) Homo sapiens cDNA FLJ10790 fis, cl...   226   5e-64
(Q8K301) RecName: Full=Probable ATP-dependent RNA helicase DDX52...   229   9e-64
(Q9Y2R4) RecName: Full=Probable ATP-dependent RNA helicase DDX52...   226   1e-63
AK133545_1(AK133545|pid:none) Mus musculus adult male xiphoid ca...   229   1e-63
CP000583_231(CP000583|pid:none) Ostreococcus lucimarinus CCE9901...   236   1e-63
AK001245_1(AK001245|pid:none) Homo sapiens cDNA FLJ10383 fis, cl...   226   1e-63
AK080767_1(AK080767|pid:none) Mus musculus adult retina cDNA, RI...   229   2e-63
BT046163_1(BT046163|pid:none) Drosophila melanogaster RE58551 fu...   244   3e-63
BC117610_1(BC117610|pid:none) Danio rerio DEAD (Asp-Glu-Ala-Asp)...   224   7e-63
AC016661_29(AC016661|pid:none) Arabidopsis thaliana chromosome 3...   221   1e-62
(Q84TG1) RecName: Full=DEAD-box ATP-dependent RNA helicase 57;  ...   221   1e-62
CU928181_98(CU928181|pid:none) Zygosaccharomyces rouxii strain C...   242   2e-62
(A5D7C1) RecName: Full=Probable ATP-dependent RNA helicase DDX52...   223   2e-62
(Q6CDS6) RecName: Full=ATP-dependent RNA helicase ROK1;         ...   224   2e-62
(A5DIX5) RecName: Full=ATP-dependent RNA helicase ROK1;         ...   224   2e-62
(Q9Y7C4) RecName: Full=ATP-dependent RNA helicase CHR1;         ...   241   4e-62
(A3GHW9) RecName: Full=ATP-dependent RNA helicase ROK1;         ...   239   1e-61
BC121227_1(BC121227|pid:none) Xenopus tropicalis ATP-dependent, ...   222   2e-61
(Q6BP45) RecName: Full=ATP-dependent RNA helicase ROK1;         ...   238   3e-61
BC088581_1(BC088581|pid:none) Xenopus tropicalis ATP-dependent, ...   222   3e-61
BC124840_1(BC124840|pid:none) Xenopus laevis hypothetical protei...   221   1e-60
BC097566_1(BC097566|pid:none) Xenopus laevis hypothetical protei...   221   1e-60
AJ010840_1(AJ010840|pid:none) Homo sapiens mRNA for ATP-dependen...   216   1e-60
BT066065_1(BT066065|pid:none) Zea mays full-length cDNA clone ZM...   223   1e-60
BC079986_1(BC079986|pid:none) Xenopus laevis hypothetical protei...   221   2e-60
(Q5K5B6) RecName: Full=DEAD-box ATP-dependent RNA helicase 57;  ...   221   3e-60
CP001325_143(CP001325|pid:none) Micromonas sp. RCC299 chromosome...   221   1e-58
DQ334185_1(DQ334185|pid:none) Drosophila miranda CG5589 gene, pa...   223   8e-57
AF077033_1(AF077033|pid:none) Homo sapiens putative ATP-dependen...   197   4e-55
AB208938_1(AB208938|pid:none) Homo sapiens mRNA for ATP-dependen...   210   5e-53
AM494969_65(AM494969|pid:none) Leishmania braziliensis chromosom...   194   6e-53
BC044017_1(BC044017|pid:none) Xenopus laevis similar to ATP-depe...   194   2e-52
(Q09775) RecName: Full=ATP-dependent RNA helicase rok1;         ...   201   3e-52
(Q5KDK3) RecName: Full=ATP-dependent RNA helicase ROK1;         ...   206   7e-52
AM502250_98(AM502250|pid:none) Leishmania infantum chromosome 32.     195   2e-48
T23922(T23922) hypothetical protein R05D11.4 - Caenorhabditis el...   168   1e-43
(A1D1E3) RecName: Full=ATP-dependent RNA helicase rok1;         ...   168   2e-40
(Q0CMB0) RecName: Full=ATP-dependent RNA helicase rok1;         ...   168   2e-40
AM920436_2317(AM920436|pid:none) Penicillium chrysogenum Wiscons...   168   3e-40
(A1CNK1) RecName: Full=ATP-dependent RNA helicase rok1;         ...   167   4e-40
(A2QAB5) RecName: Full=ATP-dependent RNA helicase rok1;         ...   167   7e-40
CR940352_194(CR940352|pid:none) Theileria annulata strain Ankara...   159   2e-37
CR954203_235(CR954203|pid:none) Ostreococcus tauri strain OTTH05...   157   7e-37
(A4RMV8) RecName: Full=ATP-dependent RNA helicase ROK1;         ...   153   8e-36
FN318289_1(FN318289|pid:none) Schistosoma japonicum isolate Anhu...   143   8e-36
FN357411_14(FN357411|pid:none) Schistosoma mansoni genome sequen...   143   1e-35
CP000851_917(CP000851|pid:none) Shewanella pealeana ATCC 700345,...   146   1e-33
(Q54KG1) RecName: Full=Probable ATP-dependent RNA helicase ddx41...   145   3e-33
CP000447_3044(CP000447|pid:none) Shewanella frigidimarina NCIMB ...   143   1e-32
CP000444_2870(CP000444|pid:none) Shewanella sp. MR-7, complete g...   142   1e-32
(Q4IP34) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel...   138   1e-31
CP000472_4012(CP000472|pid:none) Shewanella piezotolerans WP3, c...   139   1e-31
CP000821_1020(CP000821|pid:none) Shewanella sediminis HAW-EB3, c...   139   2e-31
CP000606_2793(CP000606|pid:none) Shewanella loihica PV-4, comple...   138   2e-31
BT045656_1(BT045656|pid:none) Salmo salar clone ssal-rgf-528-002...   138   2e-31
AF399010_1(AF399010|pid:none) Giardia intestinalis strain WB1267...   130   3e-31
CP000563_3032(CP000563|pid:none) Shewanella baltica OS155, compl...   138   3e-31
AF187729_1(AF187729|pid:none) Drosophila melanogaster DEAD-box p...   138   3e-31
FN392321_659(FN392321|pid:none) Pichia pastoris GS115 chromosome...   137   4e-31
AC006665_5(AC006665|pid:none) Caenorhabditis elegans fosmid H27M...   137   4e-31
AY891489_1(AY891489|pid:none) Synthetic construct Homo sapiens c...   137   6e-31
AK151427_1(AK151427|pid:none) Mus musculus bone marrow macrophag...   137   6e-31
BX641072_1(BX641072|pid:none) Homo sapiens mRNA; cDNA DKFZp686G0...   137   6e-31
BA000038_939(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, chr...   137   6e-31
AF195417_1(AF195417|pid:none) Homo sapiens DEAD-box protein abst...   137   6e-31
AK091774_1(AK091774|pid:none) Homo sapiens cDNA FLJ34455 fis, cl...   137   6e-31
AB169488_1(AB169488|pid:none) Macaca fascicularis brain cDNA, cl...   137   6e-31
AK156957_1(AK156957|pid:none) Mus musculus activated spleen cDNA...   137   6e-31
AK001255_1(AK001255|pid:none) Homo sapiens cDNA FLJ10393 fis, cl...   137   6e-31
BC133465_1(BC133465|pid:none) Bos taurus DEAD (Asp-Glu-Ala-Asp) ...   137   6e-31
CP001330_157(CP001330|pid:none) Micromonas sp. RCC299 chromosome...   137   7e-31
(Q5N7W4) RecName: Full=DEAD-box ATP-dependent RNA helicase 30;  ...   136   1e-30
CP000448_1836(CP000448|pid:none) Syntrophomonas wolfei subsp. wo...   136   1e-30
AM293618_1(AM293618|pid:none) Platanus x acerifolia partial mRNA...   136   1e-30
CP000462_2641(CP000462|pid:none) Aeromonas hydrophila subsp. hyd...   136   1e-30
AB236766_1(AB236766|pid:none) Trifolium pratense RNA for putativ...   135   2e-30
CR954247_397(CR954247|pid:none) Pseudoalteromonas haloplanktis s...   135   2e-30
(Q9LU46) RecName: Full=DEAD-box ATP-dependent RNA helicase 35;  ...   135   2e-30
AC144484_19(AC144484|pid:none) Medicago truncatula clone mth2-30...   135   2e-30
CP000264_115(CP000264|pid:none) Jannaschia sp. CCS1, complete ge...   135   2e-30
AP006627_3931(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c...   135   2e-30
(Q6C4D4) RecName: Full=ATP-dependent RNA helicase DBP2;         ...   135   3e-30
CP000083_36(CP000083|pid:none) Colwellia psychrerythraea 34H, co...   135   3e-30
BC011321_1(BC011321|pid:none) Mus musculus DEAD (Asp-Glu-Ala-Asp...   135   3e-30
(Q921N6) RecName: Full=Probable ATP-dependent RNA helicase DDX27...   135   3e-30
(Q5ACK7) RecName: Full=ATP-dependent RNA helicase DRS1;         ...   135   3e-30
CP000252_3108(CP000252|pid:none) Syntrophus aciditrophicus SB, c...   135   3e-30
AK093661_1(AK093661|pid:none) Homo sapiens cDNA FLJ36342 fis, cl...   134   4e-30
BA000012_268(BA000012|pid:none) Mesorhizobium loti MAFF303099 DN...   134   4e-30
BC011927_1(BC011927|pid:none) Homo sapiens DEAD (Asp-Glu-Ala-Asp...   134   5e-30
EU718675_1(EU718675|pid:none) Homo sapiens DEAD box polypeptide ...   134   5e-30
AF336851_1(AF336851|pid:none) Homo sapiens RNA helicase-like pro...   134   5e-30
(Q9BXF0) RecName: Full=Probable ATP-dependent RNA helicase DDX27...   134   5e-30
AK300135_1(AK300135|pid:none) Homo sapiens cDNA FLJ61659 complet...   134   5e-30
AB168247_1(AB168247|pid:none) Macaca fascicularis testis cDNA cl...   134   5e-30
CP000961_3492(CP000961|pid:none) Shewanella woodyi ATCC 51908, c...   134   6e-30
(P20447) RecName: Full=ATP-dependent RNA helicase DBP3;         ...   134   6e-30
(A5DZE6) RecName: Full=ATP-dependent RNA helicase DED1;         ...   134   6e-30
AX405698_1(AX405698|pid:none) Sequence 113 from Patent WO0222660.     134   6e-30
(A6ZUA1) RecName: Full=ATP-dependent RNA helicase DBP3;         ...   133   8e-30
CP000487_756(CP000487|pid:none) Campylobacter fetus subsp. fetus...   133   8e-30
CP000453_1600(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-...   133   1e-29
(Q5QMN3) RecName: Full=DEAD-box ATP-dependent RNA helicase 20;  ...   133   1e-29
AP003244_7(AP003244|pid:none) Oryza sativa Japonica Group genomi...   133   1e-29
(A7TJ36) RecName: Full=ATP-dependent RNA helicase DBP3;         ...   132   1e-29
CP001056_3425(CP001056|pid:none) Clostridium botulinum B str. Ek...   132   1e-29
CP000390_1414(CP000390|pid:none) Mesorhizobium sp. BNC1, complet...   132   1e-29
EU957034_1(EU957034|pid:none) Zea mays clone 1581050 ATP-depende...   132   1e-29
AB008265_8(AB008265|pid:none) Arabidopsis thaliana genomic DNA, ...   132   1e-29
EU956781_1(EU956781|pid:none) Zea mays clone 1573776 ATP-depende...   132   1e-29
BT084880_1(BT084880|pid:none) Zea mays full-length cDNA clone ZM...   132   1e-29
AP010656_48(AP010656|pid:none) Candidatus Azobacteroides pseudot...   132   1e-29
(Q8W4R3) RecName: Full=DEAD-box ATP-dependent RNA helicase 30;  ...   132   1e-29
CP001078_3210(CP001078|pid:none) Clostridium botulinum E3 str. A...   132   1e-29
CP000472_1191(CP000472|pid:none) Shewanella piezotolerans WP3, c...   132   2e-29
CR940352_511(CR940352|pid:none) Theileria annulata strain Ankara...   132   2e-29
FM992690_568(FM992690|pid:none) Candida dubliniensis CD36 chromo...   132   2e-29
(Q9P7C7) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel...   132   2e-29
(Q755A5) RecName: Full=ATP-dependent RNA helicase DBP3;         ...   132   2e-29
BC066938_1(BC066938|pid:none) Homo sapiens DEAD (Asp-Glu-Ala-Asp...   132   2e-29
CP000644_2098(CP000644|pid:none) Aeromonas salmonicida subsp. sa...   132   2e-29
CP001616_1051(CP001616|pid:none) Tolumonas auensis DSM 9187, com...   132   2e-29
(Q5A4E2) RecName: Full=ATP-dependent RNA helicase DED1;         ...   132   2e-29
AJ719804_1(AJ719804|pid:none) Gallus gallus mRNA for hypothetica...   132   2e-29
CP000781_3174(CP000781|pid:none) Xanthobacter autotrophicus Py2,...   131   3e-29
CP001287_4093(CP001287|pid:none) Cyanothece sp. PCC 8801, comple...   131   3e-29
AY648729_1(AY648729|pid:none) Danio rerio DEAD box polypeptide 2...   131   3e-29
AM902716_925(AM902716|pid:none) Bordetella petrii strain DSM 128...   131   3e-29
CP001390_2718(CP001390|pid:none) Geobacter sp. FRC-32, complete ...   131   4e-29
CP000851_3015(CP000851|pid:none) Shewanella pealeana ATCC 700345...   131   4e-29
CU928168_402(CU928168|pid:none) Kluyveromyces thermotolerans str...   131   4e-29
FM178379_1312(FM178379|pid:none) Aliivibrio salmonicida LFI1238 ...   131   4e-29
AB168153_1(AB168153|pid:none) Macaca fascicularis testis cDNA cl...   131   4e-29
BC078667_1(BC078667|pid:none) Homo sapiens DEAD (Asp-Glu-Ala-Asp...   130   5e-29
(Q5R7D1) RecName: Full=ATP-dependent RNA helicase DDX42;        ...   130   5e-29
AK292908_1(AK292908|pid:none) Homo sapiens cDNA FLJ78746 complet...   130   5e-29
FN357865_5(FN357865|pid:none) Schistosoma mansoni genome sequenc...   130   5e-29
AY466159_1(AY466159|pid:none) Zea mays DEAD box RNA helicase (DR...   130   5e-29
AK049311_1(AK049311|pid:none) Mus musculus ES cells cDNA, RIKEN ...   130   5e-29
(A3LQ01) RecName: Full=ATP-dependent RNA helicase DED1;         ...   130   5e-29
CP000806_4432(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu...   130   5e-29
(Q810A7) RecName: Full=ATP-dependent RNA helicase DDX42;        ...   130   5e-29
CP000361_1091(CP000361|pid:none) Arcobacter butzleri RM4018, com...   130   5e-29
AP008208_322(AP008208|pid:none) Oryza sativa (japonica cultivar-...   130   5e-29
AP009153_2770(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN...   130   5e-29
AF045641_1(AF045641|pid:none) Caenorhabditis elegans cosmid F53H...   130   7e-29
CP000821_2387(CP000821|pid:none) Shewanella sediminis HAW-EB3, c...   130   7e-29
FN392321_608(FN392321|pid:none) Pichia pastoris GS115 chromosome...   130   7e-29
(Q54CE0) RecName: Full=Probable ATP-dependent RNA helicase ddx17...   130   7e-29
CP000462_2340(CP000462|pid:none) Aeromonas hydrophila subsp. hyd...   130   7e-29
CU928180_189(CU928180|pid:none) Kluyveromyces thermotolerans str...   130   9e-29
(Q6FS54) RecName: Full=ATP-dependent RNA helicase DBP3;         ...   130   9e-29
CP000644_3354(CP000644|pid:none) Aeromonas salmonicida subsp. sa...   130   9e-29
BT041534_1(BT041534|pid:none) Zea mays full-length cDNA clone ZM...   130   9e-29
T19974(T19974) hypothetical protein C46F11.4 - Caenorhabditis el...   129   1e-28
BC121888_1(BC121888|pid:none) Xenopus tropicalis DEAD (Asp-Glu-A...   129   1e-28
CP001154_2532(CP001154|pid:none) Laribacter hongkongensis HLHK9,...   129   1e-28
AM910994_603(AM910994|pid:none) Plasmodium knowlesi strain H chr...   129   1e-28
(Q6CT46) RecName: Full=ATP-dependent RNA helicase DBP3;         ...   129   1e-28
(Q6BU54) RecName: Full=ATP-dependent RNA helicase DED1;         ...   129   1e-28
(Q75BL8) RecName: Full=ATP-dependent RNA helicase eIF4A;        ...   129   1e-28
CP000851_1456(CP000851|pid:none) Shewanella pealeana ATCC 700345...   129   2e-28
AE014297_711(AE014297|pid:none) Drosophila melanogaster chromoso...   129   2e-28
(A5DY34) RecName: Full=ATP-dependent RNA helicase DRS1;         ...   129   2e-28
CP000753_1974(CP000753|pid:none) Shewanella baltica OS185, compl...   129   2e-28
AM167904_171(AM167904|pid:none) Bordetella avium 197N complete g...   129   2e-28
CP000020_1446(CP000020|pid:none) Vibrio fischeri ES114 chromosom...   129   2e-28
CP000698_1946(CP000698|pid:none) Geobacter uraniireducens Rf4, c...   129   2e-28
CR378678_107(CR378678|pid:none) Photobacterium profundum SS9 chr...   129   2e-28
BT033920_1(BT033920|pid:none) Zea mays full-length cDNA clone ZM...   129   2e-28
CP000749_973(CP000749|pid:none) Marinomonas sp. MWYL1, complete ...   129   2e-28
CP000724_2970(CP000724|pid:none) Alkaliphilus metalliredigens QY...   129   2e-28
CU928178_463(CU928178|pid:none) Zygosaccharomyces rouxii strain ...   129   2e-28
(Q6BTL5) RecName: Full=ATP-dependent RNA helicase DRS1;         ...   129   2e-28
(Q2U2J6) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel...   126   2e-28
(A6RW79) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel...   125   2e-28
AP009384_2366(AP009384|pid:none) Azorhizobium caulinodans ORS 57...   128   3e-28
CP000851_2914(CP000851|pid:none) Shewanella pealeana ATCC 700345...   128   3e-28
AE017347_171(AE017347|pid:none) Cryptococcus neoformans var. neo...   128   3e-28
CP000822_2273(CP000822|pid:none) Citrobacter koseri ATCC BAA-895...   128   3e-28
CP000749_197(CP000749|pid:none) Marinomonas sp. MWYL1, complete ...   128   3e-28
(A5DQS0) RecName: Full=ATP-dependent RNA helicase DED1;         ...   128   3e-28
CP000931_1533(CP000931|pid:none) Shewanella halifaxensis HAW-EB4...   128   3e-28
AM920431_544(AM920431|pid:none) Penicillium chrysogenum Wisconsi...   123   3e-28
CP000926_4749(CP000926|pid:none) Pseudomonas putida GB-1, comple...   128   3e-28
(A3LQW7) RecName: Full=ATP-dependent RNA helicase DBP2;         ...   128   3e-28
(Q6FQQ6) RecName: Full=ATP-dependent RNA helicase eIF4A;        ...   128   3e-28
CP001229_1425(CP001229|pid:none) Sulfurihydrogenibium azorense A...   128   3e-28
CP001348_2428(CP001348|pid:none) Clostridium cellulolyticum H10,...   128   3e-28
CP000891_1323(CP000891|pid:none) Shewanella baltica OS195, compl...   128   3e-28
(A5DKW3) RecName: Full=ATP-dependent RNA helicase DRS1;         ...   128   3e-28
CP000563_1233(CP000563|pid:none) Shewanella baltica OS155, compl...   128   3e-28
CR954209_78(CR954209|pid:none) Ostreococcus tauri strain OTTH059...   128   3e-28
CP000388_2314(CP000388|pid:none) Pseudoalteromonas atlantica T6c...   128   3e-28
CP000753_1273(CP000753|pid:none) Shewanella baltica OS185, compl...   128   3e-28
AM889285_2998(AM889285|pid:none) Gluconacetobacter diazotrophicu...   128   3e-28
CP000698_368(CP000698|pid:none) Geobacter uraniireducens Rf4, co...   128   3e-28
AC115598_49(AC115598|pid:none) Dictyostelium discoideum chromoso...   122   4e-28
(A7ENE0) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel...   125   4e-28
(A4RN46) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel...   125   4e-28
S53814(S53814) DEAD box protein - slime mold (Dictyostelium disc...   122   4e-28
AE015928_831(AE015928|pid:none) Bacteroides thetaiotaomicron VPI...   127   4e-28
BC067585_1(BC067585|pid:none) Danio rerio DEAD (Asp-Glu-Ala-Asp)...   127   4e-28
CP000412_279(CP000412|pid:none) Lactobacillus delbrueckii subsp....   127   4e-28
Y17287_1(Y17287|pid:none) Plasmodium falciparum gene encoding RN...   127   4e-28
CP000076_5324(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c...   127   4e-28
CP000469_2909(CP000469|pid:none) Shewanella sp. ANA-3, complete ...   127   4e-28
CP000089_3281(CP000089|pid:none) Dechloromonas aromatica RCB, co...   127   4e-28
(A5DAC8) RecName: Full=ATP-dependent RNA helicase DBP3;         ...   127   5e-28
CP000931_2990(CP000931|pid:none) Shewanella halifaxensis HAW-EB4...   127   6e-28
AP007255_1428(AP007255|pid:none) Magnetospirillum magneticum AMB...   127   6e-28
AE014298_2227(AE014298|pid:none) Drosophila melanogaster chromos...   127   6e-28
CP000680_3701(CP000680|pid:none) Pseudomonas mendocina ymp, comp...   127   6e-28
FJ764844_8(FJ764844|pid:none) Drosophila melanogaster strain A33...   127   6e-28
CU207211_422(CU207211|pid:none) Herminiimonas arsenicoxydans chr...   127   6e-28
FJ764841_8(FJ764841|pid:none) Drosophila melanogaster strain A18...   127   6e-28
FJ764836_8(FJ764836|pid:none) Drosophila melanogaster strain A84...   127   6e-28
CP001615_2352(CP001615|pid:none) Exiguobacterium sp. AT1b, compl...   127   6e-28
(Q5BDW4) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel...   125   7e-28
CP001616_598(CP001616|pid:none) Tolumonas auensis DSM 9187, comp...   127   8e-28
BX640434_6(BX640434|pid:none) Bordetella parapertussis strain 12...   127   8e-28
BA000022_2588(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,...   127   8e-28
CP000497_674(CP000497|pid:none) Pichia stipitis CBS 6054 chromos...   127   8e-28
(A3LSN3) RecName: Full=ATP-dependent RNA helicase DRS1;         ...   127   8e-28
AE016796_216(AE016796|pid:none) Vibrio vulnificus CMCP6 chromoso...   127   8e-28
CP000115_313(CP000115|pid:none) Nitrobacter winogradskyi Nb-255,...   127   8e-28
FM178379_2189(FM178379|pid:none) Aliivibrio salmonicida LFI1238 ...   126   1e-27
FM954973_753(FM954973|pid:none) Vibrio splendidus LGP32 chromoso...   126   1e-27
(Q1DP69) RecName: Full=ATP-dependent RNA helicase DBP2;         ...   126   1e-27
X52648_1(X52648|pid:none) Schizosaccharomyces pombe p68 gene for...   126   1e-27
CP000302_2512(CP000302|pid:none) Shewanella denitrificans OS217,...   126   1e-27
CP000447_2774(CP000447|pid:none) Shewanella frigidimarina NCIMB ...   126   1e-27
AF186181_2(AF186181|pid:none) Synechococcus PCC7002 slr0082 (slr...   126   1e-27
CP000712_4584(CP000712|pid:none) Pseudomonas putida F1, complete...   126   1e-27
CP000612_2250(CP000612|pid:none) Desulfotomaculum reducens MI-1,...   126   1e-27
AM459847_1(AM459847|pid:none) Vitis vinifera contig VV78X063071....   126   1e-27
(P24782) RecName: Full=ATP-dependent RNA helicase dbp2;         ...   126   1e-27
CP000282_3192(CP000282|pid:none) Saccharophagus degradans 2-40, ...   126   1e-27
(Q2UPY3) RecName: Full=ATP-dependent RNA helicase eIF4A;        ...   126   1e-27
BA000004_2384(BA000004|pid:none) Bacillus halodurans C-125 DNA, ...   126   1e-27
(Q8TFK8) RecName: Full=ATP-dependent RNA helicase DED1;         ...   126   1e-27
BX571864_63(BX571864|pid:none) Photorhabdus luminescens subsp. l...   126   1e-27
CP000563_3406(CP000563|pid:none) Shewanella baltica OS155, compl...   126   1e-27
CP000517_221(CP000517|pid:none) Lactobacillus helveticus DPC 457...   126   1e-27
AP009153_3744(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN...   126   1e-27
(Q4WX43) RecName: Full=ATP-dependent RNA helicase eIF4A;        ...   126   1e-27
(Q6FLF3) RecName: Full=ATP-dependent RNA helicase DBP2;         ...   126   1e-27
(A1D7N3) RecName: Full=ATP-dependent RNA helicase eIF4A;        ...   126   1e-27
CP000503_2227(CP000503|pid:none) Shewanella sp. W3-18-1, complet...   126   1e-27
CP000753_851(CP000753|pid:none) Shewanella baltica OS185, comple...   126   1e-27
AE015928_1885(AE015928|pid:none) Bacteroides thetaiotaomicron VP...   126   1e-27
FM992688_926(FM992688|pid:none) Candida dubliniensis CD36 chromo...   126   1e-27
(A2QEN5) RecName: Full=ATP-dependent RNA helicase eIF4A;        ...   126   1e-27
CP001327_343(CP001327|pid:none) Micromonas sp. RCC299 chromosome...   126   1e-27
AM498287_1(AM498287|pid:none) Strongylocentrotus purpuratus mRNA...   126   1e-27
AP009049_2939(AP009049|pid:none) Clostridium kluyveri NBRC 12016...   126   1e-27
CP001068_806(CP001068|pid:none) Ralstonia pickettii 12J chromoso...   126   1e-27
(Q7SH33) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel...   124   1e-27
CU928158_2223(CU928158|pid:none) Escherichia fergusonii ATCC 354...   125   2e-27
CU861906_545(CU861906|pid:none) Ralstonia solanacearum strain Mo...   125   2e-27
CP000853_2302(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,...   125   2e-27
CP000446_2159(CP000446|pid:none) Shewanella sp. MR-4, complete g...   125   2e-27
AM920435_674(AM920435|pid:none) Penicillium chrysogenum Wisconsi...   125   2e-27
(Q8H0U8) RecName: Full=DEAD-box ATP-dependent RNA helicase 42;  ...   125   2e-27
CP001100_309(CP001100|pid:none) Chloroherpeton thalassium ATCC 3...   125   2e-27
CP000514_3786(CP000514|pid:none) Marinobacter aquaeolei VT8, com...   125   2e-27
CP001132_1126(CP001132|pid:none) Acidithiobacillus ferrooxidans ...   125   2e-27
CU928164_768(CU928164|pid:none) Escherichia coli IAI39 chromosom...   125   2e-27
CP000444_2227(CP000444|pid:none) Shewanella sp. MR-7, complete g...   125   2e-27
CP000471_1621(CP000471|pid:none) Magnetococcus sp. MC-1, complet...   125   2e-27
BC047981_1(BC047981|pid:none) Xenopus laevis similar to DEAD/H (...   125   2e-27
AE014299_3677(AE014299|pid:none) Shewanella oneidensis MR-1, com...   125   2e-27
CP000462_718(CP000462|pid:none) Aeromonas hydrophila subsp. hydr...   125   2e-27
CU633867_51(CU633867|pid:none) Podospora anserina genomic DNA ch...   121   2e-27
(Q5VQL1) RecName: Full=DEAD-box ATP-dependent RNA helicase 14;  ...   125   2e-27
CP000790_1195(CP000790|pid:none) Vibrio harveyi ATCC BAA-1116 ch...   125   2e-27
CP000503_833(CP000503|pid:none) Shewanella sp. W3-18-1, complete...   125   2e-27
EU955920_1(EU955920|pid:none) Zea mays clone 1552463 pre-mRNA-pr...   125   2e-27
CP000970_783(CP000970|pid:none) Escherichia coli SMS-3-5, comple...   125   2e-27
CU928168_385(CU928168|pid:none) Kluyveromyces thermotolerans str...   125   2e-27
CP000116_1101(CP000116|pid:none) Thiobacillus denitrificans ATCC...   125   2e-27
(Q1DQ20) RecName: Full=ATP-dependent RNA helicase eIF4A;        ...   125   2e-27
AY821682_1(AY821682|pid:none) Carassius auratus DEAD-box RNA-dep...   125   2e-27
CP000243_774(CP000243|pid:none) Escherichia coli UTI89, complete...   125   2e-27
AY458648_57(AY458648|pid:none) Uncultured marine bacterium 581 c...   125   2e-27
(Q7ZY47) RecName: Full=ATP-dependent RNA helicase DDX42;        ...   125   2e-27
AE014299_2514(AE014299|pid:none) Shewanella oneidensis MR-1, com...   125   2e-27
AM260479_529(AM260479|pid:none) Ralstonia eutropha H16 chromosom...   125   2e-27
AE014075_853(AE014075|pid:none) Escherichia coli CFT073, complet...   125   2e-27
AE005174_868(AE005174|pid:none) Escherichia coli O157:H7 EDL933,...   125   2e-27
CP000038_726(CP000038|pid:none) Shigella sonnei Ss046, complete ...   125   2e-27
(Q6FP38) RecName: Full=ATP-dependent RNA helicase DBP1;         ...   125   2e-27
AC025726_24(AC025726|pid:none) Caenorhabditis elegans cosmid Y71...   125   2e-27
CP000802_805(CP000802|pid:none) Escherichia coli HS, complete ge...   125   2e-27
CP000482_422(CP000482|pid:none) Pelobacter propionicus DSM 2379,...   125   2e-27
CU633749_483(CU633749|pid:none) Cupriavidus taiwanensis str. LMG...   125   2e-27
CP000394_2435(CP000394|pid:none) Granulibacter bethesdensis CGDN...   125   2e-27
CP000352_456(CP000352|pid:none) Ralstonia metallidurans CH34, co...   125   2e-27
CP000034_749(CP000034|pid:none) Shigella dysenteriae Sd197, comp...   125   2e-27
CP001124_3557(CP001124|pid:none) Geobacter bemidjiensis Bem, com...   125   2e-27
(Q5F485) RecName: Full=ATP-dependent RNA helicase DDX42;        ...   125   2e-27
(A2QQA8) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel...   124   2e-27
FN357833_7(FN357833|pid:none) Schistosoma mansoni genome sequenc...   125   3e-27
CP000886_2620(CP000886|pid:none) Salmonella enterica subsp. ente...   125   3e-27
AE017220_817(AE017220|pid:none) Salmonella enterica subsp. enter...   125   3e-27
CP000469_2360(CP000469|pid:none) Shewanella sp. ANA-3, complete ...   125   3e-27
(O22907) RecName: Full=DEAD-box ATP-dependent RNA helicase 24;  ...   125   3e-27
AE006468_793(AE006468|pid:none) Salmonella enterica subsp. enter...   125   3e-27
CP000230_1910(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117...   125   3e-27
BC082849_1(BC082849|pid:none) Xenopus laevis p68 RNA helicase, m...   125   3e-27
AE014613_1943(AE014613|pid:none) Salmonella enterica subsp. ente...   125   3e-27
AM412317_1765(AM412317|pid:none) Clostridium botulinum A str. AT...   125   3e-27
(Q0CXD0) RecName: Full=ATP-dependent RNA helicase eIF4A;        ...   125   3e-27
CR548612_174(CR548612|pid:none) Paramecium tetraurelia macronucl...   125   3e-27
CP000774_2471(CP000774|pid:none) Parvibaculum lavamentivorans DS...   125   3e-27
AE005674_747(AE005674|pid:none) Shigella flexneri 2a str. 301, c...   125   3e-27
(A5DL80) RecName: Full=ATP-dependent RNA helicase DBP2;         ...   125   3e-27
AM933173_784(AM933173|pid:none) Salmonella enterica subsp. enter...   125   3e-27
AY809916_1(AY809916|pid:none) Schistosoma japonicum SJCHGC01053 ...   125   3e-27
(Q54Y81) RecName: Full=ATP-dependent RNA helicase ddx23;        ...   125   3e-27
CP000394_1317(CP000394|pid:none) Granulibacter bethesdensis CGDN...   125   3e-27
CT005272_221(CT005272|pid:none) Leishmania major strain Friedlin...   125   3e-27
AE015924_76(AE015924|pid:none) Porphyromonas gingivalis W83, com...   125   3e-27
CP001089_3483(CP001089|pid:none) Geobacter lovleyi SZ, complete ...   125   3e-27
AF218580_1(AF218580|pid:none) Xenopus laevis p68 RNA helicase mR...   125   3e-27
S53813(S53813;S49262) RNA helicase - slime mold (Dictyostelium d...   125   3e-27
(A1CQA9) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel...   124   3e-27
CP000362_2914(CP000362|pid:none) Roseobacter denitrificans OCh 1...   124   4e-27
CU928176_123(CU928176|pid:none) Zygosaccharomyces rouxii strain ...   124   4e-27
CP000939_1704(CP000939|pid:none) Clostridium botulinum B1 str. O...   124   4e-27
CP000352_2555(CP000352|pid:none) Ralstonia metallidurans CH34, c...   124   4e-27
CR378678_331(CR378678|pid:none) Photobacterium profundum SS9 chr...   124   4e-27
CP000086_975(CP000086|pid:none) Burkholderia thailandensis E264 ...   124   4e-27
AE014296_1228(AE014296|pid:none) Drosophila melanogaster chromos...   124   4e-27
BC157683_1(BC157683|pid:none) Xenopus tropicalis hypothetical pr...   124   4e-27
CP000302_3007(CP000302|pid:none) Shewanella denitrificans OS217,...   124   4e-27
AM260525_1375(AM260525|pid:none) Bartonella tribocorum CIP 10547...   124   4e-27
AL646052_953(AL646052|pid:none) Ralstonia solanacearum GMI1000 c...   124   4e-27
AP008957_4094(AP008957|pid:none) Rhodococcus erythropolis PR4 DN...   124   4e-27
(Q5APT8) RecName: Full=ATP-dependent RNA helicase DBP3;         ...   124   4e-27
BX640437_205(BX640437|pid:none) Bordetella bronchiseptica strain...   124   5e-27
CP000090_916(CP000090|pid:none) Ralstonia eutropha JMP134 chromo...   124   5e-27
CP000446_3118(CP000446|pid:none) Shewanella sp. MR-4, complete g...   124   5e-27
(A5DS77) RecName: Full=ATP-dependent RNA helicase DBP2;         ...   124   5e-27
(A4QVP2) RecName: Full=ATP-dependent RNA helicase eIF4A;        ...   124   5e-27
CU633901_170(CU633901|pid:none) Podospora anserina genomic DNA c...   124   5e-27
(P06634) RecName: Full=ATP-dependent RNA helicase DED1;         ...   124   5e-27
CU914168_1894(CU914168|pid:none) Ralstonia solanacearum strain I...   124   5e-27
BX640420_113(BX640420|pid:none) Bordetella pertussis strain Toha...   124   5e-27
CP001390_1292(CP001390|pid:none) Geobacter sp. FRC-32, complete ...   124   5e-27
AL935253_122(AL935253|pid:none) Lactobacillus plantarum strain W...   124   5e-27
AE014299_3043(AE014299|pid:none) Shewanella oneidensis MR-1, com...   124   5e-27
(Q54IV3) RecName: Full=Probable ATP-dependent RNA helicase ddx42...   124   5e-27
FM954973_775(FM954973|pid:none) Vibrio splendidus LGP32 chromoso...   124   5e-27
CP000724_3235(CP000724|pid:none) Alkaliphilus metalliredigens QY...   124   5e-27
CP001087_2288(CP001087|pid:none) Desulfobacterium autotrophicum ...   124   5e-27
CP000529_3173(CP000529|pid:none) Polaromonas naphthalenivorans C...   124   6e-27
CP000360_2889(CP000360|pid:none) Acidobacteria bacterium Ellin34...   124   6e-27
CP001124_185(CP001124|pid:none) Geobacter bemidjiensis Bem, comp...   124   6e-27
AD2863(AD2863) dead-box ATP-dependent RNA helicase rhlE [importe...   124   6e-27
CP000469_803(CP000469|pid:none) Shewanella sp. ANA-3, complete g...   124   6e-27
AM889285_3049(AM889285|pid:none) Gluconacetobacter diazotrophicu...   124   6e-27
CP000094_4915(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ...   124   6e-27
AM260522_1236(AM260522|pid:none) Helicobacter acinonychis str. S...   124   6e-27
AM236080_2595(AM236080|pid:none) Rhizobium leguminosarum bv. vic...   124   6e-27
CP001338_992(CP001338|pid:none) Candidatus Methanosphaerula palu...   124   6e-27
CP000431_5979(CP000431|pid:none) Rhodococcus jostii RHA1, comple...   124   6e-27
(A7TJM9) RecName: Full=ATP-dependent RNA helicase DRS1;         ...   124   6e-27
(Q6CCZ1) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel...   124   6e-27
(Q75B50) RecName: Full=ATP-dependent RNA helicase DED1;         ...   124   6e-27
CP000614_2745(CP000614|pid:none) Burkholderia vietnamiensis G4 c...   124   6e-27
CP000102_1186(CP000102|pid:none) Methanosphaera stadtmanae DSM 3...   124   6e-27
FM178380_565(FM178380|pid:none) Aliivibrio salmonicida LFI1238 c...   124   6e-27
CP000036_625(CP000036|pid:none) Shigella boydii Sb227, complete ...   124   6e-27
AE014298_1133(AE014298|pid:none) Drosophila melanogaster chromos...   124   6e-27
CP001189_3244(CP001189|pid:none) Gluconacetobacter diazotrophicu...   124   6e-27
(Q7RV88) RecName: Full=ATP-dependent RNA helicase eIF4A;        ...   124   6e-27
AP009385_2578(AP009385|pid:none) Burkholderia multivorans ATCC 1...   124   6e-27
(Q0DB53) RecName: Full=DEAD-box ATP-dependent RNA helicase 52A; ...   121   7e-27
AP008212_1481(AP008212|pid:none) Oryza sativa (japonica cultivar...   121   7e-27
DQ019638_1(DQ019638|pid:none) Triticum aestivum DEAD-box ATPase-...   123   8e-27
AE014297_392(AE014297|pid:none) Drosophila melanogaster chromoso...   123   8e-27
(P19109) RecName: Full=ATP-dependent RNA helicase p62;          ...   123   8e-27
AE014297_390(AE014297|pid:none) Drosophila melanogaster chromoso...   123   8e-27
S11485(S11485) RNA helicase - fruit fly (Drosophila melanogaster...   123   8e-27
CP000267_2131(CP000267|pid:none) Rhodoferax ferrireducens T118, ...   123   8e-27
BA000038_1457(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, ch...   123   8e-27
CP000612_1890(CP000612|pid:none) Desulfotomaculum reducens MI-1,...   123   8e-27
(Q5KME7) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel...   123   8e-27
CR378680_170(CR378680|pid:none) Photobacterium profundum SS9 chr...   123   8e-27
AM263198_859(AM263198|pid:none) Listeria welshimeri serovar 6b s...   123   8e-27
AE017262_874(AE017262|pid:none) Listeria monocytogenes str. 4b F...   123   8e-27
CP000083_3294(CP000083|pid:none) Colwellia psychrerythraea 34H, ...   123   8e-27
CP000469_1411(CP000469|pid:none) Shewanella sp. ANA-3, complete ...   123   8e-27
CP000444_1225(CP000444|pid:none) Shewanella sp. MR-7, complete g...   123   8e-27
(Q5KIK3) RecName: Full=ATP-dependent RNA helicase DRS1;         ...   123   8e-27
AC1540(AC1540) ATP-dependent RNA helicase homolog lin0859 [impor...   123   8e-27
CP000316_1497(CP000316|pid:none) Polaromonas sp. JS666, complete...   123   8e-27
(Q4WT99) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel...   123   8e-27
(A4QYM6) RecName: Full=ATP-dependent RNA helicase DRS1;         ...   123   8e-27
CP001068_410(CP001068|pid:none) Ralstonia pickettii 12J chromoso...   123   8e-27
BA000038_1159(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, ch...   123   1e-26
CT573071_2031(CT573071|pid:none) Kuenenia stuttgartiensis genome...   123   1e-26
AM777061_1(AM777061|pid:none) Anopheles arabiensis partial ENSAN...   123   1e-26
(A1D373) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel...   123   1e-26
AM502254_469(AM502254|pid:none) Leishmania infantum chromosome 36.    123   1e-26
(A7TK55) RecName: Full=ATP-dependent RNA helicase eIF4A;        ...   123   1e-26
CP000939_651(CP000939|pid:none) Clostridium botulinum B1 str. Ok...   123   1e-26
CP001234_701(CP001234|pid:none) Vibrio cholerae M66-2 chromosome...   123   1e-26
CP000446_1159(CP000446|pid:none) Shewanella sp. MR-4, complete g...   123   1e-26
CP000681_1246(CP000681|pid:none) Shewanella putrefaciens CN-32, ...   123   1e-26
AM494972_237(AM494972|pid:none) Leishmania braziliensis chromoso...   123   1e-26
AE008919_64(AE008919|pid:none) Uncultured marine proteobacterium...   123   1e-26
CP000510_1713(CP000510|pid:none) Psychromonas ingrahamii 37, com...   123   1e-26
AM260479_2626(AM260479|pid:none) Ralstonia eutropha H16 chromoso...   123   1e-26
AE003853_752(AE003853|pid:none) Vibrio cholerae O1 biovar eltor ...   123   1e-26
A97581(A97581) ATP-dependent RNA helicase rhle VCA0204 [imported...   123   1e-26
CP000503_2814(CP000503|pid:none) Shewanella sp. W3-18-1, complet...   123   1e-26
AP008955_3397(AP008955|pid:none) Brevibacillus brevis NBRC 10059...   123   1e-26
(Q6CXT4) RecName: Full=ATP-dependent RNA helicase eIF4A;        ...   123   1e-26
AE014299_3299(AE014299|pid:none) Shewanella oneidensis MR-1, com...   123   1e-26
CP000783_2484(CP000783|pid:none) Enterobacter sakazakii ATCC BAA...   123   1e-26
CR954246_2904(CR954246|pid:none) Pseudoalteromonas haloplanktis ...   122   1e-26
CP001025_2569(CP001025|pid:none) Burkholderia ambifaria MC40-6 c...   122   1e-26
CP000109_780(CP000109|pid:none) Thiomicrospira crunogena XCL-2, ...   122   1e-26
CR954208_313(CR954208|pid:none) Ostreococcus tauri strain OTTH05...   122   1e-26
AE008384_2556(AE008384|pid:none) Methanosarcina mazei strain Goe...   122   1e-26
CP000440_2713(CP000440|pid:none) Burkholderia ambifaria AMMD chr...   122   1e-26
AP008955_4361(AP008955|pid:none) Brevibacillus brevis NBRC 10059...   122   1e-26
AM167904_3340(AM167904|pid:none) Bordetella avium 197N complete ...   122   1e-26
BA000031_903(BA000031|pid:none) Vibrio parahaemolyticus RIMD 221...   122   1e-26
D89592_1(D89592|pid:none) Vibrio alginolyticus rhlE, KtrA and Kt...   122   1e-26
AM412317_641(AM412317|pid:none) Clostridium botulinum A str. ATC...   122   1e-26
AM910996_435(AM910996|pid:none) Plasmodium knowlesi strain H chr...   122   1e-26
CP001083_643(CP001083|pid:none) Clostridium botulinum Ba4 str. 6...   122   1e-26
(Q6BY27) RecName: Full=ATP-dependent RNA helicase DBP2;         ...   122   1e-26
CU928166_128(CU928166|pid:none) Kluyveromyces thermotolerans str...   122   2e-26
AM286415_2746(AM286415|pid:none) Yersinia enterocolitica subsp. ...   122   2e-26
CP000601_104(CP000601|pid:none) Ostreococcus lucimarinus CCE9901...   122   2e-26
CP001230_897(CP001230|pid:none) Persephonella marina EX-H1, comp...   122   2e-26
CP000758_2123(CP000758|pid:none) Ochrobactrum anthropi ATCC 4918...   122   2e-26
CP001072_242(CP001072|pid:none) Helicobacter pylori Shi470, comp...   122   2e-26
CP001052_3249(CP001052|pid:none) Burkholderia phytofirmans PsJN ...   122   2e-26
(Q10I26) RecName: Full=DEAD-box ATP-dependent RNA helicase 34;  ...   122   2e-26
CP001392_1178(CP001392|pid:none) Diaphorobacter sp. TPSY, comple...   122   2e-26
CP000124_904(CP000124|pid:none) Burkholderia pseudomallei 1710b ...   122   2e-26
CR628337_305(CR628337|pid:none) Legionella pneumophila str. Lens...   122   2e-26
(Q5KNF8) RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helic...   122   2e-26
CP000269_1297(CP000269|pid:none) Janthinobacterium sp. Marseille...   122   2e-26
AE017042_944(AE017042|pid:none) Yersinia pestis biovar Microtus ...   122   2e-26
CP000139_3059(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,...   122   2e-26
CP000685_4534(CP000685|pid:none) Flavobacterium johnsoniae UW101...   122   2e-26
BX571965_705(BX571965|pid:none) Burkholderia pseudomallei strain...   122   2e-26
CP001142_274(CP001142|pid:none) Phaeodactylum tricornutum CCAP 1...   122   2e-26
CP000444_1427(CP000444|pid:none) Shewanella sp. MR-7, complete g...   122   2e-26
CP000644_2314(CP000644|pid:none) Aeromonas salmonicida subsp. sa...   122   2e-26
CP000510_1471(CP000510|pid:none) Psychromonas ingrahamii 37, com...   122   2e-26
CP000539_2511(CP000539|pid:none) Acidovorax sp. JS42, complete g...   122   2e-26
(A7EGL7) RecName: Full=ATP-dependent RNA helicase eIF4A;        ...   122   2e-26
BX936398_1214(BX936398|pid:none) Yersinia pseudotuberculosis IP3...   122   2e-26
CP000675_322(CP000675|pid:none) Legionella pneumophila str. Corb...   122   2e-26
AF426171_17(AF426171|pid:none) Yersinia pestis transposase (tnp)...   122   2e-26
CP000241_251(CP000241|pid:none) Helicobacter pylori HPAG1, compl...   122   2e-26
CP000721_2878(CP000721|pid:none) Clostridium beijerinckii NCIMB ...   122   2e-26
(A6RJ45) RecName: Full=ATP-dependent RNA helicase eIF4A;        ...   122   2e-26
AP011115_6097(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp...   122   2e-26
BA000032_583(BA000032|pid:none) Vibrio parahaemolyticus RIMD 221...   122   2e-26
(P32892) RecName: Full=ATP-dependent RNA helicase DRS1;         ...   122   2e-26
CP000544_905(CP000544|pid:none) Halorhodospira halophila SL1, co...   122   2e-26
FN392322_194(FN392322|pid:none) Pichia pastoris GS115 chromosome...   122   2e-26
AF2395(AF2395) ATP-dependent RNA helicase [imported] - Nostoc sp...   122   2e-26
AM398681_1649(AM398681|pid:none) Flavobacterium psychrophilum JI...   122   2e-26
CU468135_2251(CU468135|pid:none) Erwinia tasmaniensis strain ET1...   122   2e-26
BA000032_390(BA000032|pid:none) Vibrio parahaemolyticus RIMD 221...   122   2e-26
CP000958_2678(CP000958|pid:none) Burkholderia cenocepacia MC0-3 ...   122   2e-26
CP000117_1948(CP000117|pid:none) Anabaena variabilis ATCC 29413,...   122   2e-26
AM747720_934(AM747720|pid:none) Burkholderia cenocepacia J2315 c...   122   2e-26
CP000378_2044(CP000378|pid:none) Burkholderia cenocepacia AU 105...   122   2e-26
(P0C2M6) RecName: Full=ATP-dependent RNA helicase ded1;         ...   122   2e-26
(Q02748) RecName: Full=Eukaryotic initiation factor 4A;         ...   122   2e-26
CP001618_1994(CP001618|pid:none) Beutenbergia cavernae DSM 12333...   122   2e-26
(P24783) RecName: Full=ATP-dependent RNA helicase DBP2;         ...   122   2e-26
CP001189_2523(CP001189|pid:none) Gluconacetobacter diazotrophicu...   122   2e-26
FN357329_33(FN357329|pid:none) Schistosoma mansoni genome sequen...   122   2e-26
FN357901_4(FN357901|pid:none) Schistosoma mansoni genome sequenc...   122   2e-26
BC117660_1(BC117660|pid:none) Danio rerio similar to Probable RN...   122   2e-26
(P47943) RecName: Full=ATP-dependent RNA helicase eIF4A;        ...   122   2e-26
AE015927_1959(AE015927|pid:none) Clostridium tetani E88, complet...   122   2e-26
CP000151_2809(CP000151|pid:none) Burkholderia sp. 383 chromosome...   122   2e-26
BC134863_1(BC134863|pid:none) Danio rerio similar to Probable RN...   122   2e-26
CP000908_3926(CP000908|pid:none) Methylobacterium extorquens PA1...   122   2e-26

>(Q86IZ9) RecName: Full=Probable ATP-dependent RNA helicase ddx52;
                  EC=3.6.1.-; AltName: Full=DEAD box protein 52;
           &AC116986_53(AC116986|pid:none)
          Length = 668

 Score =  395 bits (1016), Expect(2) = e-152
 Identities = 198/198 (100%), Positives = 198/198 (100%)
 Frame = +3

Query: 3   LVFDEADKLFDKNFQEQVDIVVTACQNPKLKICLFSATMNQQVEELGHSIMKNPIKIIIG 182
           LVFDEADKLFDKNFQEQVDIVVTACQNPKLKICLFSATMNQQVEELGHSIMKNPIKIIIG
Sbjct: 346 LVFDEADKLFDKNFQEQVDIVVTACQNPKLKICLFSATMNQQVEELGHSIMKNPIKIIIG 405

Query: 183 EQNAAAITVDQKLIYVGKEEGKLLAVRQLIQKGLEPPILIFTQSKERAHDLFQELIFDGI 362
           EQNAAAITVDQKLIYVGKEEGKLLAVRQLIQKGLEPPILIFTQSKERAHDLFQELIFDGI
Sbjct: 406 EQNAAAITVDQKLIYVGKEEGKLLAVRQLIQKGLEPPILIFTQSKERAHDLFQELIFDGI 465

Query: 363 NVDVIHSERTQFQRDTIVKKFRMGKIWVLICTELMARGMDFKGVNFVINFDFPHTLASYI 542
           NVDVIHSERTQFQRDTIVKKFRMGKIWVLICTELMARGMDFKGVNFVINFDFPHTLASYI
Sbjct: 466 NVDVIHSERTQFQRDTIVKKFRMGKIWVLICTELMARGMDFKGVNFVINFDFPHTLASYI 525

Query: 543 HRIGRTGRAGRPGVAYTL 596
           HRIGRTGRAGRPGVAYTL
Sbjct: 526 HRIGRTGRAGRPGVAYTL 543

 Score =  166 bits (421), Expect(2) = e-152
 Identities = 81/81 (100%), Positives = 81/81 (100%)
 Frame = +1

Query: 598 YTDADTPMLPTIVHAMKQSGSHVPDWMLNLKVQGKKKQQYRLKGVERESFSTIPLSERTS 777
           YTDADTPMLPTIVHAMKQSGSHVPDWMLNLKVQGKKKQQYRLKGVERESFSTIPLSERTS
Sbjct: 544 YTDADTPMLPTIVHAMKQSGSHVPDWMLNLKVQGKKKQQYRLKGVERESFSTIPLSERTS 603

Query: 778 SKFKLRKNKKSFNLPGDQQKS 840
           SKFKLRKNKKSFNLPGDQQKS
Sbjct: 604 SKFKLRKNKKSFNLPGDQQKS 624

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,399,174,741
Number of extensions: 26525986
Number of successful extensions: 68238
Number of sequences better than 10.0: 5351
Number of HSP's gapped: 65786
Number of HSP's successfully gapped: 5549
Length of query: 325
Length of database: 1,040,966,779
Length adjustment: 128
Effective length of query: 197
Effective length of database: 630,818,299
Effective search space: 124271204903
Effective search space used: 124271204903
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.75  gvh: 0.33  alm: 0.45  top: 0.53  tms: 0.00  mit: 0.22  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.12  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: nuclear
	 28.0 %: cytoplasmic
	 24.0 %: cytoskeletal
	  4.0 %: mitochondrial

>> prediction for Contig-U10654-1 is nuc
VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 1
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0