Contig-U01696-1
Contig ID Contig-U01696-1
Contig update 2001. 8.29
Contig sequence
>Contig-U01696-1 (Contig-U01696-1Q) /CSM_Contig/Contig-U01696-1Q.Seq.d
ATCACTATCAATCAAAAAGTAAATTATTTAAAAAATAAAGTTGGTTTGTG
AGAAACTTTTTGGTGACAATCAATTCTAAAATCCTCTCAACTATAAATAG
AAAAAAGAGTGATACTTTTAACAACAATAATTCTCAAAAAAAAAAAAAAA
AAAAAAAAAAATAATAATAATAATAAAAATAAAAATAATAGTAATTATTA
GTTTTTATTAAATGAATATATTTTCTTATATTCAAAGTTTGTGGTTCCTT
AAAAAAAATTTTTTAAAATAAAAAAAATTAAAAATTCATAAAAAAAGTCA
ATTTAATCAGTAAAAATAATATATAAAGAAAAATAAAAATAGAAATAAAA
ATAGAAATAAATAAATAAATAAAAAAAAAAAGAATTAAAAAGAAAAAAAA
AAGAAAAGAAAAAAAAAAAAAAAGTATATATATAAAAAAAAATCAAAAAA
ATGATTTTACAAGTCAGAGTTAAATTTCCATCAGATTATCCAGTTATTTA
TAAAACAATTAGGTTGGATAATTCATTAACAGTGCAAGAGGCAATTTTAG
CAATTGGTCAAGCAATTAATGTAACACCAGCTTCAGATTTGGGATTATAT
TTACCAGACGATCCAAAGCATTTAACAGATACAGAATTACTTTCCTCATT
TGAAAGTTTTAGTGATGCTCAATATATAGAATTAAAATCAAAGAAATCTA
GTAAAAATAAAGATAGTTGCTGTACTATCATGTAAAATTTATAAATCTAT
ATACTATATATATTCCCCAATTCTCTCACTCTCTTTCTCTAAATTCACAC
ACACATACAAATATTTTTTTTCCACTTTTTTTTTTTTTTTTCCACTTTTT
TTGGAAACAGAACTTGTTTCTATAATTTTTTTTTAAAAAAAAAAAAAAAA
AAAAAACAAAAATATAATAATTCATTTACTATTTATTTCTATAAAATACT
AAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGG--
--------AATAAATATAAACCATTTATAATTGTAATTTTTATATTTAAG
GTATAGTTTAAAAATTAAATATTTAAAAACTAAAAATAAAATAATTATAT
ATTTATATAAAATTAAATTAAATTAAATTAAATTAAATAAAATAAAATAA
AATAAACAAAATAAAATAAAATAAAATAAAATGATACAATCTACAAACAC
AAACACTCCTTTACCATATGAATTAAATTTAAAAGCCACTAGCGATATAT
ATAATACAATTTTTAAACCAAAAGAAAGACAAGGCAGATATTTCATAATT
TCAAAATATGATTGTAATAATTCAGTTGATGATGTTAAAATGTTTGATAT
GGATATCTTGGAATATTATCCAATTGAATTAAGTATGCAATATTTATTGA
ACAAATATCCAAACTTCAAAATTCATTATTTTTTATTGATAAAAGACTAT
CAATATTATCTTTACGATAAAGACTGTGCCACCTTAGAAATTCAACCAGT
GATTAAATTTAACTGAAAATAATATCTAAA

Gap gap included
Contig length 1520
Chromosome number (1..6, M) -
Chromosome length -
Start point -
End point -
Strand (PLUS/MINUS) -
Number of clones 10
Number of EST 11
Link to clone list U01696
List of clone(s)

est1=SSM114E,1,758
est2=SSB801F,21,326
est3=SSC804F,310,888
est4=SSB186Z,453,769
est5=SSH393Z,457,756
est6=SSF429Z,496,965
est7=SSE573F,646,999
est8=SSC634F,1000,1295
est9=SSA684F,1027,1519
est10=SSJ155F,1048,1519
est11=SSE573Z,1173,1522
Translated Amino Acid sequence
itinqkvnylknkvgl*etfw*qsilkssql*iekrvillttiilkkkkkkkknnnnnkn
knnsny*fllneyiflyskfvvp*kkffkikkikns*kksi*svkiiykek*k*k*k*k*
ink*kkkelkrkkkekkkkkkvyi*kkikkmilqvrvkfpsdypviyktirldnsltvqe
ailaigqainvtpasdlglylpddpkhltdtellssfesfsdaqyielkskkssknkdsc
ctim*nl*iyilyifpnsltlfl*IHTHIQIFFFHFFFFFSTFFGNRTCFYNFFLKKKKK
KKQKYNNSFTIYFYKILKEKKKKKKKKKKKKN---

---NKYKPFIIVIFIFKV*fkn*ifkn*k*nnyifi*n*ikln*ik*nkik*tk*nkik*
ndtiykhkhsfti*ikfksh*ryi*ynf*tkrktrqifhnfki*l**fs**c*nv*ygyl
gilsn*ikyaifieqisklqnslffidkrlsilslr*rlchlrnstsd*i*lkiisk


Translated Amino Acid sequence (All Frames)
Frame A:
itinqkvnylknkvgl*etfw*qsilkssql*iekrvillttiilkkkkkkkknnnnnkn
knnsny*fllneyiflyskfvvp*kkffkikkikns*kksi*svkiiykek*k*k*k*k*
ink*kkkelkrkkkekkkkkkvyi*kkikkmilqvrvkfpsdypviyktirldnsltvqe
ailaigqainvtpasdlglylpddpkhltdtellssfesfsdaqyielkskkssknkdsc
ctim*nl*iyilyifpnsltlfl*IHTHIQIFFFHFFFFFSTFFGNRTCFYNFFLKKKKK
KKQKYNNSFTIYFYKILKEKKKKKKKKKKKKN---

---NKYKPFIIVIFIFKV*fkn*ifkn*k*nnyifi*n*ikln*ik*nkik*tk*nkik*
ndtiykhkhsfti*ikfksh*ryi*ynf*tkrktrqifhnfki*l**fs**c*nv*ygyl
gilsn*ikyaifieqisklqnslffidkrlsilslr*rlchlrnstsd*i*lkiisk

Frame B:
slsikk*ii*kiklvceklfgdnqf*nplnyk*kke*yf*qq*fskkkkkkkkiiiiiki
kiiviisfy*mnifsyiqslwflkknflk*kklkihkksqfnq*k*yikknknrnknrnk
*inkkkkn*kekkkkrkkkkkyiykkkskk*fykselnfhqiiqlfikqlgwiih*qckr
qf*qlvkqlm*hqlqiwdyiyqtiqsi*qiqnyfphlkvlvmlni*n*nqrnlvkikiva
vlsckiyksiyyiyspilslsfskfthtykyffstfffffplfletelvsiiff*kkkkk
knkniiihllfisiky*kkkkkkkkkkkkkkm---

---ininhl*l*flylryslkikylktknkiiiylykikln*iklnkik*nkqnkik*nk
miqstntntplpyelnlkatsdiyntifkpkerqgryfiiskydcnnsvddvkmfdmdil
eyypielsmqyllnkypnfkihyfllikdyqyylydkdcatleiqpvikfn*k*yl

Frame C:
hyqsksklfkk*swfvrnflvtinskilstinrkksdtfnnnnsqkkkkkkkk*****k*
k***llvfik*iyflifkvcgslkkif*nkkn*kfikkvnlisknni*rkikieikiein
k*ikkkrikkkkkrkekkkksiyikknqkndftsqs*isirlssyl*nn*vg*finsarg
nfsnwssn*cntsfrfgiiftrrskafnryritfli*kf**csiyrikikei**k*r*ll
yyhvkfinlytiyipqfshslslnshthtniffplfffffhffwkqnlfl*fffkkkkkk
ktki**fiyylfl*ntkrkkkkkkkkkkkkkw---

---*i*tiyncnfyi*giv*klni*klkik*lyiyikln*ikln*ik*nkinkik*nkik
*ynlqtqtllyhmn*i*kplaiyiiqflnqkkdkadis*fqnmiviiqlmmlkcliwisw
niiqln*vcniy*tniqtskfiify**ktiniiftiktvpp*kfnq*lnltenni*

own update 2004. 6. 7
Homology vs CSM-cDNA
Query= Contig-U01696-1 (Contig-U01696-1Q)
/CSM_Contig/Contig-U01696-1Q.Seq.d
(1530 letters)

Database: CSM
8361 sequences; 7,895,291 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U01696-1 (Contig-U01696-1Q) /CSM_Contig/Conti... 718 0.0
Contig-U13820-1 (Contig-U13820-1Q) /CSM_Contig/Conti... 44 6e-04
Contig-U13386-1 (Contig-U13386-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U11344-1 (Contig-U11344-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U14848-1 (Contig-U14848-1Q) /CSM_Contig/Conti... 40 0.010
Contig-U14733-1 (Contig-U14733-1Q) /CSM_Contig/Conti... 38 0.038
Contig-U14104-1 (Contig-U14104-1Q) /CSM_Contig/Conti... 38 0.038
Contig-U12289-1 (Contig-U12289-1Q) /CSM_Contig/Conti... 38 0.038
Contig-U11001-1 (Contig-U11001-1Q) /CSM_Contig/Conti... 38 0.038
Contig-U08828-1 (Contig-U08828-1Q) /CSM_Contig/Conti... 38 0.038

>Contig-U01696-1 (Contig-U01696-1Q) /CSM_Contig/Contig-U01696-1Q.Seq.d
Length = 1530

Score = 718 bits (362), Expect = 0.0
Identities = 362/362 (100%)
Strand = Plus / Plus


Query: 452 tgattttacaagtcagagttaaatttccatcagattatccagttatttataaaacaatta 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tgattttacaagtcagagttaaatttccatcagattatccagttatttataaaacaatta 511


Query: 512 ggttggataattcattaacagtgcaagaggcaattttagcaattggtcaagcaattaatg 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ggttggataattcattaacagtgcaagaggcaattttagcaattggtcaagcaattaatg 571


Query: 572 taacaccagcttcagatttgggattatatttaccagacgatccaaagcatttaacagata 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 taacaccagcttcagatttgggattatatttaccagacgatccaaagcatttaacagata 631


Query: 632 cagaattactttcctcatttgaaagttttagtgatgctcaatatatagaattaaaatcaa 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 cagaattactttcctcatttgaaagttttagtgatgctcaatatatagaattaaaatcaa 691


Query: 692 agaaatctagtaaaaataaagatagttgctgtactatcatgtaaaatttataaatctata 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 agaaatctagtaaaaataaagatagttgctgtactatcatgtaaaatttataaatctata 751


Query: 752 tactatatatattccccaattctctcactctctttctctaaattcacacacacatacaaa 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 tactatatatattccccaattctctcactctctttctctaaattcacacacacatacaaa 811


Query: 812 ta 813
||
Sbjct: 812 ta 813


Score = 692 bits (349), Expect = 0.0
Identities = 349/349 (100%)
Strand = Plus / Plus


Query: 1182 tgatacaatctacaaacacaaacactcctttaccatatgaattaaatttaaaagccacta 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1182 tgatacaatctacaaacacaaacactcctttaccatatgaattaaatttaaaagccacta 1241


Query: 1242 gcgatatatataatacaatttttaaaccaaaagaaagacaaggcagatatttcataattt 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 gcgatatatataatacaatttttaaaccaaaagaaagacaaggcagatatttcataattt 1301


Query: 1302 caaaatatgattgtaataattcagttgatgatgttaaaatgtttgatatggatatcttgg 1361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1302 caaaatatgattgtaataattcagttgatgatgttaaaatgtttgatatggatatcttgg 1361


Query: 1362 aatattatccaattgaattaagtatgcaatatttattgaacaaatatccaaacttcaaaa 1421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1362 aatattatccaattgaattaagtatgcaatatttattgaacaaatatccaaacttcaaaa 1421


Query: 1422 ttcattattttttattgataaaagactatcaatattatctttacgataaagactgtgcca 1481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1422 ttcattattttttattgataaaagactatcaatattatctttacgataaagactgtgcca 1481


Query: 1482 ccttagaaattcaaccagtgattaaatttaactgaaaataatatctaaa 1530
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1482 ccttagaaattcaaccagtgattaaatttaactgaaaataatatctaaa 1530


Score = 268 bits (135), Expect = 2e-71
Identities = 135/135 (100%)
Strand = Plus / Plus


Query: 1 atcactatcaatcaaaaagtaaattatttaaaaaataaagttggtttgtgagaaactttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcactatcaatcaaaaagtaaattatttaaaaaataaagttggtttgtgagaaactttt 60


Query: 61 tggtgacaatcaattctaaaatcctctcaactataaatagaaaaaagagtgatactttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggtgacaatcaattctaaaatcctctcaactataaatagaaaaaagagtgatactttta 120


Query: 121 acaacaataattctc 135
|||||||||||||||
Sbjct: 121 acaacaataattctc 135


Score = 119 bits (60), Expect = 1e-26
Identities = 60/60 (100%)
Strand = Plus / Plus


Query: 191 gtaattattagtttttattaaatgaatatattttcttatattcaaagtttgtggttcctt 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gtaattattagtttttattaaatgaatatattttcttatattcaaagtttgtggttcctt 250


Score = 97.6 bits (49), Expect = 5e-20
Identities = 49/49 (100%)
Strand = Plus / Plus


Query: 1009 aataaatataaaccatttataattgtaatttttatatttaaggtatagt 1057
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1009 aataaatataaaccatttataattgtaatttttatatttaaggtatagt 1057


Score = 85.7 bits (43), Expect = 2e-16
Identities = 43/43 (100%)
Strand = Plus / Plus


Query: 913 tataataattcatttactatttatttctataaaatactaaaag 955
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 tataataattcatttactatttatttctataaaatactaaaag 955


Score = 63.9 bits (32), Expect = 7e-10
Identities = 32/32 (100%)
Strand = Plus / Plus


Query: 853 ggaaacagaacttgtttctataattttttttt 884
||||||||||||||||||||||||||||||||
Sbjct: 853 ggaaacagaacttgtttctataattttttttt 884


>Contig-U13820-1 (Contig-U13820-1Q) /CSM_Contig/Contig-U13820-1Q.Seq.d
Length = 535

Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 1502 attaaatttaactgaaaataat 1523
||||||||||||||||||||||
Sbjct: 173 attaaatttaactgaaaataat 194


>Contig-U13386-1 (Contig-U13386-1Q) /CSM_Contig/Contig-U13386-1Q.Seq.d
Length = 309

Score = 42.1 bits (21), Expect = 0.002
Identities = 27/29 (93%)
Strand = Plus / Minus


Query: 1017 taaaccatttataattgtaatttttatat 1045
||||| |||||||||||| ||||||||||
Sbjct: 98 taaactatttataattgtcatttttatat 70


Database: CSM
Posted date: Jun 7, 2004 8:33 AM
Number of letters in database: 7,895,291
Number of sequences in database: 8361

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 33,701
Number of Sequences: 8361
Number of extensions: 33701
Number of successful extensions: 3937
Number of sequences better than 10.0: 378
length of query: 1530
length of database: 7,895,291
effective HSP length: 16
effective length of query: 1514
effective length of database: 7,761,515
effective search space: 11750933710
effective search space used: 11750933710
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 5. 3
Homology vs DNA
Query= Contig-U01696-1 (Contig-U01696-1Q) /CSM_Contig/Contig-U01696-1Q.Seq.d
(1530 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU076382) Dictyostelium discoideum slug cDNA, clone SSA684. 686 0.0 1
(C92996) Dictyostelium discoideum slug cDNA, clone SSF429. 613 0.0 2
(AU038896) Dictyostelium discoideum slug cDNA, clone SSM114. 591 e-166 2
(C25684) Dictyostelium discoideum slug cDNA, clone SSB186. 581 e-161 1
(C92525) Dictyostelium discoideum slug cDNA, clone SSE573. 490 e-134 1
(AU038194) Dictyostelium discoideum slug cDNA, clone SSH393. 484 e-132 1
(AU072457) Dictyostelium discoideum slug cDNA, clone SSE573. 333 2e-99 2
(AU074804) Dictyostelium discoideum slug cDNA, clone SSM114. 268 6e-67 1
(AU071559) Dictyostelium discoideum slug cDNA, clone SSB801. 222 2e-56 2
(AU073983) Dictyostelium discoideum slug cDNA, clone SSJ155. 226 2e-54 1
(AU071949) Dictyostelium discoideum slug cDNA, clone SSC804. 196 2e-45 1
(AU071851) Dictyostelium discoideum slug cDNA, clone SSC634. 131 9e-26 1
(ER384440) 1094415012291 Global-Ocean-Sampling_GS-34-01-01-1... 34 0.011 4
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 36 0.014 14
(AC000107) Genomic sequence for Arabidopsis thaliana BAC F17... 52 0.065 1
(AX510342) Sequence 5037 from Patent WO0216655. 52 0.065 1
(AC017035) Homo sapiens BAC clone RP11-310J20 from 2, comple... 52 0.065 1
(AJ834490) Arabidopsis thaliana T-DNA flanking sequence, lef... 52 0.065 1
(AC168444) Strongylocentrotus purpuratus clone R3-39C18, WOR... 34 0.092 7
(AC168426) Strongylocentrotus purpuratus clone R3-39M1, WORK... 38 0.15 2
(FP101868) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 0.15 2
(AC105435) Sus scrofa clone RP44-307B12, WORKING DRAFT SEQUE... 38 0.15 2
(AC201482) Strongylocentrotus purpuratus clone R3-3058D17, W... 38 0.15 2
(AC168454) Strongylocentrotus purpuratus clone R3-35M20, WOR... 38 0.15 2
(AC008825) Homo sapiens chromosome 5 clone CTD-2134P3, compl... 36 0.15 2
(AC178771) Strongylocentrotus purpuratus clone R3-19H13, WOR... 38 0.15 2
(AE014822) Plasmodium falciparum 3D7 chromosome 14 section 7... 34 0.18 11
(CU929562) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 0.24 8
(AC152306) Bos taurus clone CH240-2B18, WORKING DRAFT SEQUEN... 50 0.26 1
(AC222260) Bos taurus clone CH240-413H20, WORKING DRAFT SEQU... 50 0.26 1
(FM983493) Glossina morsitans morsitans EST, clone GMsg122h0... 50 0.26 1
(FM981668) Glossina morsitans morsitans EST, clone GMsg141f0... 50 0.26 1
(FM977231) Glossina morsitans morsitans EST, clone GMsg117a1... 50 0.26 1
(FM971690) Glossina morsitans morsitans EST, clone GMsg65b11... 50 0.26 1
(FM960515) Glossina morsitans morsitans EST, clone GMsg40f01... 50 0.26 1
(FM959778) Glossina morsitans morsitans EST, clone GMsg49g02... 50 0.26 1
(BK006346) TPA_exp: Apis mellifera sex determination locus, ... 36 0.35 5
(AZ537940) ENTEG70TR Entamoeba histolytica Sheared DNA Entam... 44 0.40 2
(BH153167) ENTTB82TR Entamoeba histolytica Sheared DNA Entam... 44 0.40 2
(AP002775) Homo sapiens genomic DNA, chromosome 11q clone:RP... 38 0.45 6
(BI515980) BB160021A10D08.5 Bee Brain Normalized Library, BB... 38 0.50 3
(AC128985) Rattus norvegicus clone CH230-1F10, *** SEQUENCIN... 38 0.53 2
(AC098229) Rattus norvegicus clone CH230-1F6, *** SEQUENCING... 38 0.53 2
(CP000727) Clostridium botulinum A str. Hall, complete genome. 38 0.54 16
(AC122830) Mus musculus BAC clone RP23-224I23 from 8, comple... 38 0.54 2
(AC136572) Rattus norvegicus clone CH230-22E17, *** SEQUENCI... 36 0.55 2
(AC114209) Rattus norvegicus clone CH230-198O21, WORKING DRA... 36 0.55 2
(AP002426) Homo sapiens genomic DNA, chromosome 18q12 clone:... 36 0.55 2
(AC165040) Bos taurus clone CH240-156I8, *** SEQUENCING IN P... 34 0.55 2
(AC015532) Homo sapiens chromosome 18 clone RP11-497J22 map ... 36 0.55 2
(AC116323) Mus musculus BAC clone RP23-281F3 from 8, complet... 38 0.55 2
(AC012417) Homo sapiens chromosome 18, clone RP11-408H20, co... 36 0.55 2
(AL137061) Human DNA sequence from clone RP11-477B16 on chro... 38 0.55 2
(AC181768) Strongylocentrotus purpuratus clone R3-1035F10, W... 34 0.55 2
(AC122731) Pan troglodytes clone rp43-14d7, complete sequence. 38 0.56 2
(AC108138) Homo sapiens chromosome 18, clone RP11-235B21, co... 36 0.59 2
(EA737581) Sequence 9027 from patent US 7368527. 44 0.65 3
(AJ851495) Gallus gallus mRNA for hypothetical protein, clon... 38 0.67 2
(AC190101) Canis Familiaris chromosome 24, clone XX-503E16, ... 42 0.70 3
(CP000726) Clostridium botulinum A str. ATCC 19397, complete... 38 0.70 16
(BX294103) Zebrafish DNA sequence from clone CH211-257A8 in ... 36 0.71 8
(BU109818) 603128212F1 CSEQCHL13 Gallus gallus cDNA clone Ch... 38 0.71 2
(CR388433) Gallus gallus finished cDNA, clone ChEST583l3. 38 0.71 2
(BU257065) 603745950F1 CSEQCHN38 Gallus gallus cDNA clone Ch... 38 0.72 2
(BU251433) 603404524F1 CSEQCHN35 Gallus gallus cDNA clone Ch... 38 0.73 2
(BU291457) 603604214F1 CSEQCHN55 Gallus gallus cDNA clone Ch... 38 0.73 2
(BU441073) 603209428F1 CSEQRBN11 Gallus gallus cDNA clone Ch... 38 0.73 2
(AJ731084) Gallus gallus EST, clone 3o20s2. 38 0.73 2
(BV394243) S243P6195FH1.T0 CaliforniaCoyote Canis latrans ST... 36 0.73 2
(BU276685) 603863446F1 CSEQCHN54 Gallus gallus cDNA clone Ch... 38 0.73 2
(AM412317) Clostridium botulinum A str. ATCC 3502 complete g... 38 0.75 16
(EX630233) 255479106 Pea aphid whole body normalized full le... 34 0.81 3
(EX604116) 255344436 Pea aphid whole body normalized full le... 34 0.83 3
(GC698024) Sequence 13269 from patent US 6812339. 44 0.84 3
(AC204783) Myotis lucifugus clone CH235-162I11, WORKING DRAF... 40 0.89 4
(FB571381) Sequence 248 from Patent EP1865317. 36 0.90 12
(CT365191) Sus scrofa genomic clone CH242-449P21, genomic su... 42 0.92 3
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 36 0.97 17
(CU915636) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 1.0 1
(EK513813) 1095515490142 Global-Ocean-Sampling_GS-32-01-01-1... 48 1.0 1
(EK121511) 1092963529212 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.0 1
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 36 1.1 8
(CR382400) Plasmodium falciparum chromosome 6, complete sequ... 34 1.2 16
(CR382399) Plasmodium falciparum chromosome 6, complete sequ... 36 1.2 13
(CW948343) TcB31.4_F02_T7 Tribolium BAC library Tribolium ca... 44 1.4 2
(CP000312) Clostridium perfringens SM101, complete genome. 36 1.4 20
(AC005504) Plasmodium falciparum chromosome 12, *** SEQUENCI... 38 1.7 7
(FB571362) Sequence 229 from Patent EP1865317. 34 1.9 8
(AC095158) Rattus norvegicus clone CH230-7M10, WORKING DRAFT... 36 2.0 2
(AC073820) Mus musculus clone RP23-77O17, WORKING DRAFT SEQU... 34 2.0 2
(AC118999) Rattus norvegicus clone CH230-183A20, *** SEQUENC... 36 2.0 2
(AC155286) Mus musculus 10 BAC RP23-213N17 (Roswell Park Can... 36 2.0 2
(AC119341) Rattus norvegicus clone CH230-196A2, WORKING DRAF... 34 2.0 2
(CU570808) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 2.0 2
(AC161488) Mus musculus chromosome 7, clone RP24-300N16, com... 34 2.0 2
(AC015591) Homo sapiens clone RP11-44N20, WORKING DRAFT SEQU... 34 2.0 2
(AC060788) Homo sapiens chromosome 8, clone CTD-2008O4, comp... 34 2.0 2
(AC147237) Mus musculus BAC clone RP23-370E6 from 3, complet... 32 2.0 2
(AC161441) Mus musculus chromosome 7, clone RP24-158L15, com... 34 2.0 2
(AC180665) Strongylocentrotus purpuratus clone R3-3089J14, W... 34 2.1 2
(AC110671) Canis lupus familiaris clone RP81-69D24, WORKING ... 36 2.2 7
(CU674393) Synthetic construct Homo sapiens gateway clone IM... 38 2.2 2
(AM431793) Vitis vinifera contig VV78X121302.8, whole genome... 38 2.3 3
(AC097688) Rattus norvegicus clone CH230-145A9, WORKING DRAF... 38 2.4 8
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 38 2.5 10
(AC157584) Mus musculus chromosome 15, clone RP24-304L10, co... 38 2.5 6
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 34 2.6 11
(EB612078) AGENCOURT_56929767 D. grimshawi EST Drosophila gr... 32 2.7 2
(AG496962) Mus musculus molossinus DNA, clone:MSMg01-396F21.... 34 2.7 2
(EB624842) AGENCOURT_57015837 D. grimshawi EST Drosophila gr... 32 2.7 2
(EH249686) JGI_ACAC13734.rev ACAC Phakopsora pachyrhizi TW72... 32 2.7 3
(BV258065) S235P6419FF12.T0 ItalianGreyhound Canis familiari... 36 2.7 2
(AZ653959) 1M0527E22R Mouse 10kb plasmid UUGC1M library Mus ... 32 2.7 2
(CK095406) I083P43.3pR Populus senescing leaves cDNA library... 32 2.8 2
(FB571325) Sequence 192 from Patent EP1865317. 36 3.0 11
(EK310679) 1095462396130 Global-Ocean-Sampling_GS-31-01-01-1... 34 3.1 3
(AU088403) Plasmodium falciparum 3D7 cDNA clone from Sugano ... 40 3.2 2
(EH242921) JGI_ACAC14025.rev ACAC Phakopsora pachyrhizi TW72... 32 3.2 3
(AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2... 34 3.2 10
(EH243716) JGI_ACAC13829.rev ACAC Phakopsora pachyrhizi TW72... 32 3.3 3
(AL512597) Mouse DNA sequence from clone RP23-132G2 on chrom... 34 3.4 8
(AC099772) Mus Musculus Chromosome 5 RP23-319P12 Strain C57B... 46 3.4 6
(AE014831) Plasmodium falciparum 3D7 chromosome 10 section 3... 36 3.4 11
(AP007897) Lotus japonicus genomic DNA, chromosome 1, clone:... 36 3.7 7
(EY324650) CAWY10405.fwd CAWY Helobdella robusta Subtracted ... 32 3.8 3
(AC184079) Populus trichocarpa clone Pop1-53P10, complete se... 36 3.8 6
(AE014824) Plasmodium falciparum 3D7 chromosome 14 section 9... 40 3.8 13
(AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6... 36 3.9 12
(CU929418) Zebrafish DNA sequence from clone CH73-158N7 in l... 46 4.0 1
(CR450770) Zebrafish DNA sequence from clone DKEY-161M5 in l... 46 4.0 1
(BX469900) Zebrafish DNA sequence from clone CH211-280H1 in ... 46 4.0 1
(AL805945) Zebrafish DNA sequence from clone CH211-195M7. 46 4.0 1
(AC153017) Mus musculus BAC clone RP23-188L21 from chromosom... 46 4.0 1
(AC144543) Mus musculus BAC clone RP23-394E9 from 12, comple... 46 4.0 1
(AC140326) Mus musculus BAC clone RP23-413D14 from 8, comple... 46 4.0 1
(AC121817) Mus musculus BAC clone RP23-458O1 from chromosome... 46 4.0 1
(AC099771) Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP... 46 4.0 1
(AC171498) Medicago truncatula chromosome 7 BAC clone mth2-7... 46 4.0 1
(AP009021) Bombyx mori genomic DNA, chromosome 22, BAC clone... 46 4.0 1
(AC084650) Caenorhabditis briggsae cosmid G45N14, complete s... 46 4.0 1
(AP003067) Homo sapiens genomic DNA, chromosome 11q, clone:R... 46 4.0 1
(AC016612) Homo sapiens chromosome 5 clone CTD-2197M16, comp... 46 4.0 1
(AC013248) Homo sapiens chromosome 17, clone RP11-64B12, com... 46 4.0 1
(AC010996) Homo sapiens chromosome 10 clone RP11-118J22, com... 46 4.0 1
(AC143714) Macaca mulatta clone CH250-267O24, WORKING DRAFT ... 46 4.0 1
(CU076063) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 4.0 1
(AC233403) Solanum tuberosum chromosome 5 clone RH056O13, **... 46 4.0 1
(AC216702) Solanum lycopersicum chromosome 7 clone C07SLm009... 46 4.0 1
(AC191273) Zea mays chromosome 4 clone CH201-385F3; ZMMBBc03... 46 4.0 1
(AC188006) Zea mays chromosome 4 clone CH201-396G4; ZMMBBc03... 46 4.0 1
(AC180002) Strongylocentrotus purpuratus clone R3-16O18, WOR... 46 4.0 1
(AC175418) Bos taurus clone CH240-518A20, WORKING DRAFT SEQU... 46 4.0 1
(AC167074) Oryctolagus cuniculus clone LB1-159I16, WORKING D... 46 4.0 1
(AC166857) Oryctolagus cuniculus clone LB1-102D21, WORKING D... 46 4.0 1
(AC009820) Homo sapiens chromosome 11 clone RP11-397P10 map ... 46 4.0 1
(EK115682) 1092963238622 Global-Ocean-Sampling_GS-31-01-01-1... 46 4.0 1
(EJ497195) 1095403582239 Global-Ocean-Sampling_GS-28-01-01-1... 46 4.0 1
(EI040849) hha0009dh01.g1 hha Oryza australiensis genomic cl... 46 4.0 1
(DU518960) 1098609830380 CHORI-243 Ovis aries genomic clone ... 46 4.0 1
(DU346455) 1098313111302 CHORI-243 Ovis aries genomic clone ... 46 4.0 1
(DV427227) NADXI85TR Aedes aegypti infected with Dengue viru... 46 4.0 1
(DV366298) NACBC35TR Aedes aegypti infected with Brugia Mala... 46 4.0 1
(DV366297) NACBC35TF Aedes aegypti infected with Brugia Mala... 46 4.0 1
(DV301579) NABQ220TF Aedes aegypti infected with Brugia Mala... 46 4.0 1
(DV295248) NABNS89TRB Aedes aegypti infected with Brugia Mal... 46 4.0 1
(DV295247) NABNS89TF Aedes aegypti infected with Brugia Mala... 46 4.0 1
(BW405192) Ciona intestinalis cDNA, clone:ciem847k07, 3'end,... 46 4.0 1
(FG729922) G1145P321FA9.T0 Anolis carolinensis pooled normal... 46 4.0 1
(FG729875) G1145P321RA9.T0 Anolis carolinensis pooled normal... 46 4.0 1
(FF777120) XABT77671.rev Gateway compatible cien cDNA librar... 46 4.0 1
(FD974622) RR3G002JQ RR3(NY) Raphanus raphanistrum subsp. ra... 46 4.0 1
(FD254458) CBZF5681.g1 CBZF: Normalized blue catfish cDNA li... 46 4.0 1
(X61203) Methanococcus voltae vhcG, vhcA genes for subunits ... 46 4.0 1
(X61201) Methanococcus voltae frcA, frcB, frcG genes for sub... 46 4.0 1
(AC179996) Strongylocentrotus purpuratus clone R3-16P23, WOR... 40 4.1 8
(AM425443) Vitis vinifera contig VV78X035779.3, whole genome... 34 4.3 3
(EK039293) 1092959501999 Global-Ocean-Sampling_GS-31-01-01-1... 34 4.6 3
(AM437546) Vitis vinifera contig VV78X082637.4, whole genome... 34 4.7 4
(EK509143) 1095515469593 Global-Ocean-Sampling_GS-32-01-01-1... 44 4.8 2
(AC109669) Rattus norvegicus clone CH230-118P6, *** SEQUENCI... 32 5.1 7
(AC219206) Solanum lycopersicum chromosome 6 clone C06HBa003... 34 5.2 8
(AC122186) Mus musculus BAC clone RP23-19M20 from 1, complet... 40 5.3 6
(AC073956) Homo sapiens chromosome 12 clone RP11-207N16, WOR... 36 5.6 7
(AC187533) Callithrix jacchus BAC clone CH259-75H12 from chr... 38 5.6 11
(BV944187) pRRL2:Newb:20080411:324047 USMARC Pig Breed SNP D... 36 5.7 2
(AL645857) Mouse DNA sequence from clone RP23-167N2 on chrom... 38 5.7 7
(AJ005398) Dictyostelium discoideum regA gene. 34 6.0 3
(AC201710) Aotus nancymaae clone CH258-388K12, WORKING DRAFT... 38 6.0 6
(DU938223) 365433 Tomato EcoRI BAC Library Solanum lycopersi... 42 6.1 2
(AL513534) Human DNA sequence from clone RP11-119F7 on chrom... 36 6.3 5
(AM502248) Leishmania infantum chromosome 30. 32 6.3 2
(AC170471) Bos taurus clone CH240-245M1, WORKING DRAFT SEQUE... 40 6.4 6
(AC224609) Bos taurus clone CH240-480H11, WORKING DRAFT SEQU... 36 6.6 7
(CR792440) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 6.9 8
(AL139235) Human DNA sequence *** SEQUENCING CANCELLED *** f... 34 7.0 2
(CT030017) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 7.0 6
(AC148689) Macaca mulatta Major Histocompatibility Complex B... 40 7.1 5
(AC116278) Rattus norvegicus clone CH230-55J18, *** SEQUENCI... 32 7.1 2
(CR381583) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 32 7.1 2
(AC127159) Rattus norvegicus clone CH230-5E12, WORKING DRAFT... 34 7.2 2
(AC117170) Rattus norvegicus clone CH230-20P9, *** SEQUENCIN... 34 7.2 2
(AC125771) Rattus norvegicus clone CH230-8F3, *** SEQUENCING... 32 7.2 2
(AC094754) Rattus norvegicus clone CH230-5I12, WORKING DRAFT... 34 7.2 2
(AC122916) Mus musculus BAC clone RP23-28F1 from 5, complete... 34 7.2 2
(CT025587) Mouse DNA sequence from clone RP23-325P15 on chro... 32 7.2 2
(AC118782) Rattus norvegicus clone CH230-304B7, *** SEQUENCI... 32 7.2 2
(AC158144) Mus musculus chromosome 7, clone RP23-82N3, compl... 32 7.3 2
(AC123418) Rattus norvegicus clone CH230-200C1, WORKING DRAF... 34 7.3 2
(AC215424) Solanum lycopersicum chromosome 2 clone C02HBa021... 40 7.3 3
(AL671173) Mouse DNA sequence from clone RP23-426N4 on chrom... 32 7.3 2
(AL356253) Human DNA sequence from clone RP11-318C5 on chrom... 34 7.3 2
(AC125621) Homo sapiens 3 BAC RP11-769N7 (Roswell Park Cance... 38 7.3 5
(BX510648) Zebrafish DNA sequence from clone CH211-155O9 in ... 32 7.3 2
(AC156989) Mus musculus chromosome 1, clone RP23-379L2, comp... 32 7.3 2
(AC122340) Mus musculus BAC clone RP23-354B8 from 15, comple... 34 7.3 2
(AC168800) Strongylocentrotus purpuratus clone R3-13I15, WOR... 32 7.3 2
(AC010894) Homo sapiens BAC clone RP11-483E17 from 2, comple... 32 7.3 2
(CT027646) Zebrafish DNA sequence from clone CH211-38M6 in l... 32 7.4 2
(CU302374) Wallaby DNA sequence from clone MEKBa-193K19. 32 7.4 2
(AC180155) Strongylocentrotus purpuratus clone R3-3003F4, WO... 34 7.4 2
(AC118645) Mus musculus chromosome 15, clone RP24-114E9, com... 34 7.4 2
(AC178439) Strongylocentrotus purpuratus clone R3-3041K16, W... 34 7.4 2
(AC025729) Homo sapiens chromosome 13 clone RP11-2A19, WORKI... 34 7.4 2
(AC108698) Homo sapiens 3 BAC RP11-12A13 (Roswell Park Cance... 34 7.4 6
(AL672285) Mouse DNA sequence from clone RP23-45G5 on chromo... 34 7.4 2
(AC176017) Strongylocentrotus purpuratus clone R3-17O4, WORK... 32 7.4 2
(AC004915) Homo sapiens PAC clone RP5-888A21 from 7, complet... 42 7.4 5
(CT030246) Mouse DNA sequence from clone RP24-400A10 on chro... 32 7.4 2
(AC055124) Homo sapiens chromosome 13 clone RP11-744B5, WORK... 34 7.4 2
(AC099600) Mus musculus chromosome 15, clone RP23-236P20, co... 38 7.5 7
(AC178441) Strongylocentrotus purpuratus clone R3-3041L5, WO... 34 7.5 2
(AC176231) Strongylocentrotus purpuratus clone R3-3063B4, WO... 34 7.5 2
(BX663610) Zebrafish DNA sequence from clone DKEYP-114A6 in ... 32 7.5 2
(AL353772) Human DNA sequence from clone RP11-465H8 on chrom... 34 7.6 2
(AC151458) Medicago truncatula chromosome 8 clone mth2-105a1... 32 7.6 2
(AP009676) Lotus japonicus genomic DNA, clone: LjT30I08, TM0... 34 7.6 2
(AC169696) Mus musculus chromosome 8 clone RP24-286E18 map 8... 32 7.6 2
(AC015895) Homo sapiens clone RP11-12A13, WORKING DRAFT SEQU... 34 7.6 6
(AL355869) Human DNA sequence *** SEQUENCING CANCELLED *** f... 34 7.6 2
(CU694858) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 7.6 8
(AC173724) Strongylocentrotus purpuratus clone R3-59C1, *** ... 38 7.7 6
(AC007190) Genomic sequence for Arabidopsis thaliana BAC F23... 34 7.7 5
(GC701908) Sequence 17153 from patent US 6812339. 32 7.8 2
(AC232101) Solanum tuberosum strain Diploid genotype RH89-03... 34 7.8 7
(CT030689) Mouse DNA sequence from clone RP23-70C3 on chromo... 32 7.9 2
(CW138252) 104_525_11120103_148_34874_050 Sorghum methylatio... 38 8.0 2
(AC093913) Homo sapiens BAC clone RP11-768G3 from 4, complet... 32 8.3 9
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet... 40 8.4 19
(AM485470) Vitis vinifera, whole genome shotgun sequence, co... 38 8.7 2
(CT009506) Pig DNA sequence from clone CH242-216I3 on chromo... 40 9.1 3
(AY337263) Tetrahymena thermophila Golgi-associated cell div... 34 9.1 2
(AC168785) Strongylocentrotus purpuratus clone R3-13K8, WORK... 34 9.2 7
(AL607146) Mouse DNA sequence from clone RP23-312G6 on chrom... 38 9.4 5
(CL344518) RPCI44_278D22.f RPCI-44 Sus scrofa genomic clone ... 32 9.5 3
(ES749365) BGBV-aad45f10.g1 Snail_EST_pSMART Biomphalaria gl... 34 9.6 2
(AC182571) Mimulus guttatus clone MGBa-65G3, complete sequence. 42 9.6 7
(AF077407) Arabidopsis thaliana BAC F9D12. 40 9.6 3
(BG172966) 602336625F1 NCI_CGAP_Mam1 Mus musculus cDNA clone... 32 9.8 2
(DT232206) JGI_CAAT5803.fwd CAAT Pimephales promelas brain 7... 32 9.9 2
(DT306380) JGI_CAAW13698.fwd CAAW Pimephales promelas testis... 32 9.9 2
(DT234216) JGI_CAAT8046.fwd CAAT Pimephales promelas brain 7... 32 9.9 2
(DT244324) JGI_CAAT13553.fwd CAAT Pimephales promelas brain ... 32 9.9 2
(DT242053) JGI_CAAT12297.fwd CAAT Pimephales promelas brain ... 32 9.9 2
(DT287604) JGI_CAAW701.fwd CAAW Pimephales promelas testis 7... 32 9.9 2
(DE882238) Macropus eugenii DNA, BAC clone: MEB1-055N15_F, 5... 34 9.9 2
(DT350940) JGI_CABS548.fwd CABS Pimephales promelas kidney 7... 32 9.9 2
(DE878060) Macropus eugenii DNA, BAC clone: MEB1-050E11_R, 3... 34 9.9 2
(DT241368) JGI_CAAT11933.fwd CAAT Pimephales promelas brain ... 32 9.9 2
(DT151548) JGI_ANNO30257.fwd ANNO Pimephales promelas Whole ... 32 9.9 2

>(AU076382) Dictyostelium discoideum slug cDNA, clone SSA684.
Length = 493

Score = 686 bits (346), Expect = 0.0
Identities = 346/346 (100%)
Strand = Plus / Plus


Query: 1183 gatacaatctacaaacacaaacactcctttaccatatgaattaaatttaaaagccactag 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 gatacaatctacaaacacaaacactcctttaccatatgaattaaatttaaaagccactag 207


Query: 1243 cgatatatataatacaatttttaaaccaaaagaaagacaaggcagatatttcataatttc 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 cgatatatataatacaatttttaaaccaaaagaaagacaaggcagatatttcataatttc 267


Query: 1303 aaaatatgattgtaataattcagttgatgatgttaaaatgtttgatatggatatcttgga 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aaaatatgattgtaataattcagttgatgatgttaaaatgtttgatatggatatcttgga 327


Query: 1363 atattatccaattgaattaagtatgcaatatttattgaacaaatatccaaacttcaaaat 1422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 atattatccaattgaattaagtatgcaatatttattgaacaaatatccaaacttcaaaat 387


Query: 1423 tcattattttttattgataaaagactatcaatattatctttacgataaagactgtgccac 1482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tcattattttttattgataaaagactatcaatattatctttacgataaagactgtgccac 447


Query: 1483 cttagaaattcaaccagtgattaaatttaactgaaaataatatcta 1528
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 cttagaaattcaaccagtgattaaatttaactgaaaataatatcta 493

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,648,193,041
Number of extensions: 106032625
Number of successful extensions: 10518134
Number of sequences better than 10.0: 270
Length of query: 1530
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1506
Effective length of database: 99,340,224,878
Effective search space: 149606378666268
Effective search space used: 149606378666268
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.18
Homology vs Protein
Query= Contig-U01696-1 (Contig-U01696-1Q) /CSM_Contig/Contig-U01696-1Q.Seq.d
(1530 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

***** No hits found ******

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,291,015,352
Number of extensions: 18170495
Number of successful extensions: 39396
Number of sequences better than 10.0: 0
Number of HSP's gapped: 39375
Number of HSP's successfully gapped: 0
Length of query: 510
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 377
Effective length of database: 620,718,517
Effective search space: 234010880909
Effective search space used: 234010880909
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 1.00 gvh: 0.46 alm: 0.34 top: 0.50 tms: 0.00 mit: 0.34 mip: 0.00
nuc: 0.77 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

80.0 %: nuclear
8.0 %: plasma membrane
4.0 %: cytoskeletal
4.0 %: mitochondrial
4.0 %: cytoplasmic

>> prediction for Contig-U01696-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 10
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0