Contig-U10479-1
Contig ID Contig-U10479-1
Contig update 2002. 9.13
Contig sequence
>Contig-U10479-1 (Contig-U10479-1Q) /CSM_Contig/Contig-U10479-1Q.Seq.d
ACTGTTGGCCTCTGGTTTCAAAGAAACATCATATTCAACGTGATCCTTTG
AACGAATCTCATATCTCAATTTTGAAAACTCCTCCAAATCAATTACAAGC
TTACTTTTTAAAGATTACCAATAAGAATCCAATCGTTTACGTTTACATTC
CAGAGCCAAATCCAATCATGTCCTATTTGGTTGCTGATAAAGTTACGGTC
ATTGATAAATCTAGAACCACTACCAATCATAAATGGTTCCCTTCCACTCC
AAATGATAAGATCTCACCATTCACTTTTGAATTGGATCCATCTTCAACCA
CTAAACGTAGAATTGGTTTACCATTTGCAAATGATGTAACAATCTCTCCA
AATTGTTTTGCTATCACCTCTGATGGTAGATATGTTATTAGTTGTGCTCA
TTGGGATAATAGTTTCAAACTATCATTTGTTGATAGTGCAAAATTAATTC
AAAGTGTTGTAAAACATAAAGATACTGTCACTTGTTTATCTTTGGCTTCT
GATGGTCAAACTTTAATCACTGGTTCAAAAGATACAACCGTAATGGTTTG
GAGAATTGCAACAACCAATAAAAGTGGTGCTCCAAAATTCAATGATGTAC
CTGATCATATTCTTTATGGTCATGATGATGAAATCACCTGTGTAGATGTA
AATGTTGGTTTAGATATCTCTATCTCTGGTTCAAAAGATGGTACTTGTAT
CATTCACAACTTAAAACATGGTGAATATGTTAGATCAATTTATTTACCAA
GACAATCTCCAATTAGTTTAATTGCAATTTCAAATCAAGGTTATATTGTA
ATTTATTCACAAGCCGATTTAATGATTTATCTATACAGTATAAATGGTGG
ACTCTTGAAAACAGTTGATACACACGAAAGATTACATAGTATTATAATAA
GTAAAGATTCAGAGTATTTAATTACTGGTGGCGAAAGAGGGGTTGTTGTT
ATTAGAACACTTTTCAATTTAAAACCAACTAATCATAAATTAGTGTTTGG
AACTCCAATTCATTCTTTAGCCATGGCATCCGATCAAAAACATTTAATGG
TTGGTTTAGAAGATGGTAGATTATTAATTATTGCATCTAATGGTGCATCT
CCTCCAACAAATTATTATCCATTACCAAATTCCTCATCTTCATTAGTTTC
ATCATCCAATAAATTTTAAAATTAAAAATAAAATAAAATAAAAAATT

Gap no gap
Contig length 1197
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 4282031
End point 4283214
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U10479
List of clone(s)

est1=VFL855E,1,1198
Translated Amino Acid sequence
CWPLVSKKHHIQRDPLNESHISILKTPPNQLQAYFLKITNKNPIVYVYIPEPNPIMSYLV
ADKVTVIDKSRTTTNHKWFPSTPNDKISPFTFELDPSSTTKRRIGLPFANDVTISPNCFA
ITSDGRYVISCAHWDNSFKLSFVDSAKLIQSVVKHKDTVTCLSLASDGQTLITGSKDTTV
MVWRIATTNKSGAPKFNDVPDHILYGHDDEITCVDVNVGLDISISGSKDGTCIIHNLKHG
EYVRSIYLPRQSPISLIAISNQGYIVIYSQADLMIYLYSINGGLLKTVDTHERLHSIIIS
KDSEYLITGGERGVVVIRTLFNLKPTNHKLVFGTPIHSLAMASDQKHLMVGLEDGRLLII
ASNGASPPTNYYPLPNSSSSLVSSSNKF*n*k*nkikn


Translated Amino Acid sequence (All Frames)
Frame A:
tvglwfqrniifnvil*tnlisqf*kllqinykltf*rlpiriqsftftfqsqiqscpiw
lliklrslinleplpiingslplqmirshhsllnwihlqplnvelvyhlqmm*qslqivl
lsplmvdmllvvligiivsnyhllivqn*fkvl*nikilslvylwllmvkl*slvqkiqp
*wfgelqqpikvvlqnsmmyliiffmvmmmkspv*m*mlv*islslvqkmvlvsftt*nm
vnmldqfiyqdnlqlv*lqfqikvil*fihkpi**fiytv*mvds*kqlihtkdyivl**
vkiqsi*llvakegllllehfsi*nqliin*clelqfil*pwhpikni*wlv*kmvdy*l
lhlmvhllqqiiihyqiphlh*fhhpinfkiknkik*ki


Frame B:
llasgfketsyst*sferisylnfenssksitsllfkdyq*esnrlrlhsraksnhvlfg
c**sygh**i*nhyqs*mvpfhsk**dltihf*igsifnh*t*nwftick*cnnlsklfc
yhl*w*icy*lcslg**fqtiic**ckinskcckt*rychlfifgf*wsnfnhwfkrynr
nglencnnq*kwcskiq*ct*syslws***nhlcrckcwfrylylwfkrwylyhsqlktw
*ic*inlftktisn*fncnfksrlycnlftsrfndlsiqykwwtlens*ytrkit*yynk
*rfrvfnywwrkrgccy*ntfqfktn*s*isvwnsnsffshgirsktfngwfrrw*iiny
ci*wcissnkllsitkflifisfiiq*ilklkik*nkk


Frame C:
CWPLVSKKHHIQRDPLNESHISILKTPPNQLQAYFLKITNKNPIVYVYIPEPNPIMSYLV
ADKVTVIDKSRTTTNHKWFPSTPNDKISPFTFELDPSSTTKRRIGLPFANDVTISPNCFA
ITSDGRYVISCAHWDNSFKLSFVDSAKLIQSVVKHKDTVTCLSLASDGQTLITGSKDTTV
MVWRIATTNKSGAPKFNDVPDHILYGHDDEITCVDVNVGLDISISGSKDGTCIIHNLKHG
EYVRSIYLPRQSPISLIAISNQGYIVIYSQADLMIYLYSINGGLLKTVDTHERLHSIIIS
KDSEYLITGGERGVVVIRTLFNLKPTNHKLVFGTPIHSLAMASDQKHLMVGLEDGRLLII
ASNGASPPTNYYPLPNSSSSLVSSSNKF*n*k*nkikn


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U10479-1 (Contig-U10479-1Q)
/CSM_Contig/Contig-U10479-1Q.Seq.d
(1197 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U10479-1 (Contig-U10479-1Q) /CSM_Contig/Conti... 2294 0.0
Contig-U11196-1 (Contig-U11196-1Q) /CSM_Contig/Conti... 38 0.021
Contig-U11163-1 (Contig-U11163-1Q) /CSM_Contig/Conti... 38 0.021
Contig-U07064-1 (Contig-U07064-1Q) /CSM_Contig/Conti... 38 0.021
Contig-U02778-1 (Contig-U02778-1Q) /CSM_Contig/Conti... 38 0.021
Contig-U14725-1 (Contig-U14725-1Q) /CSM_Contig/Conti... 36 0.085
Contig-U12805-1 (Contig-U12805-1Q) /CSM_Contig/Conti... 36 0.085
Contig-U11831-1 (Contig-U11831-1Q) /CSM_Contig/Conti... 36 0.085
Contig-U13504-1 (Contig-U13504-1Q) /CSM_Contig/Conti... 34 0.33
Contig-U13224-1 (Contig-U13224-1Q) /CSM_Contig/Conti... 34 0.33

>Contig-U10479-1 (Contig-U10479-1Q) /CSM_Contig/Contig-U10479-1Q.Seq.d
Length = 1197

Score = 2294 bits (1157), Expect = 0.0
Identities = 1157/1157 (100%)
Strand = Plus / Plus


Query: 1 actgttggcctctggtttcaaagaaacatcatattcaacgtgatcctttgaacgaatctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actgttggcctctggtttcaaagaaacatcatattcaacgtgatcctttgaacgaatctc 60


Query: 61 atatctcaattttgaaaactcctccaaatcaattacaagcttactttttaaagattacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atatctcaattttgaaaactcctccaaatcaattacaagcttactttttaaagattacca 120


Query: 121 ataagaatccaatcgtttacgtttacattccagagccaaatccaatcatgtcctatttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ataagaatccaatcgtttacgtttacattccagagccaaatccaatcatgtcctatttgg 180


Query: 181 ttgctgataaagttacggtcattgataaatctagaaccactaccaatcataaatggttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgctgataaagttacggtcattgataaatctagaaccactaccaatcataaatggttcc 240


Query: 241 cttccactccaaatgataagatctcaccattcacttttgaattggatccatcttcaacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttccactccaaatgataagatctcaccattcacttttgaattggatccatcttcaacca 300


Query: 301 ctaaacgtagaattggtttaccatttgcaaatgatgtaacaatctctccaaattgttttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctaaacgtagaattggtttaccatttgcaaatgatgtaacaatctctccaaattgttttg 360


Query: 361 ctatcacctctgatggtagatatgttattagttgtgctcattgggataatagtttcaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctatcacctctgatggtagatatgttattagttgtgctcattgggataatagtttcaaac 420


Query: 421 tatcatttgttgatagtgcaaaattaattcaaagtgttgtaaaacataaagatactgtca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tatcatttgttgatagtgcaaaattaattcaaagtgttgtaaaacataaagatactgtca 480


Query: 481 cttgtttatctttggcttctgatggtcaaactttaatcactggttcaaaagatacaaccg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cttgtttatctttggcttctgatggtcaaactttaatcactggttcaaaagatacaaccg 540


Query: 541 taatggtttggagaattgcaacaaccaataaaagtggtgctccaaaattcaatgatgtac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 taatggtttggagaattgcaacaaccaataaaagtggtgctccaaaattcaatgatgtac 600


Query: 601 ctgatcatattctttatggtcatgatgatgaaatcacctgtgtagatgtaaatgttggtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctgatcatattctttatggtcatgatgatgaaatcacctgtgtagatgtaaatgttggtt 660


Query: 661 tagatatctctatctctggttcaaaagatggtacttgtatcattcacaacttaaaacatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tagatatctctatctctggttcaaaagatggtacttgtatcattcacaacttaaaacatg 720


Query: 721 gtgaatatgttagatcaatttatttaccaagacaatctccaattagtttaattgcaattt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtgaatatgttagatcaatttatttaccaagacaatctccaattagtttaattgcaattt 780


Query: 781 caaatcaaggttatattgtaatttattcacaagccgatttaatgatttatctatacagta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 caaatcaaggttatattgtaatttattcacaagccgatttaatgatttatctatacagta 840


Query: 841 taaatggtggactcttgaaaacagttgatacacacgaaagattacatagtattataataa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 taaatggtggactcttgaaaacagttgatacacacgaaagattacatagtattataataa 900


Query: 901 gtaaagattcagagtatttaattactggtggcgaaagaggggttgttgttattagaacac 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gtaaagattcagagtatttaattactggtggcgaaagaggggttgttgttattagaacac 960


Query: 961 ttttcaatttaaaaccaactaatcataaattagtgtttggaactccaattcattctttag 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ttttcaatttaaaaccaactaatcataaattagtgtttggaactccaattcattctttag 1020


Query: 1021 ccatggcatccgatcaaaaacatttaatggttggtttagaagatggtagattattaatta 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ccatggcatccgatcaaaaacatttaatggttggtttagaagatggtagattattaatta 1080


Query: 1081 ttgcatctaatggtgcatctcctccaacaaattattatccattaccaaattcctcatctt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttgcatctaatggtgcatctcctccaacaaattattatccattaccaaattcctcatctt 1140


Query: 1141 cattagtttcatcatcc 1157
|||||||||||||||||
Sbjct: 1141 cattagtttcatcatcc 1157


>Contig-U11196-1 (Contig-U11196-1Q) /CSM_Contig/Contig-U11196-1Q.Seq.d
Length = 2477

Score = 38.2 bits (19), Expect = 0.021
Identities = 22/23 (95%)
Strand = Plus / Minus


Query: 1134 tcatcttcattagtttcatcatc 1156
|||||||||||| ||||||||||
Sbjct: 1975 tcatcttcattattttcatcatc 1953


>Contig-U11163-1 (Contig-U11163-1Q) /CSM_Contig/Contig-U11163-1Q.Seq.d
Length = 3664

Score = 38.2 bits (19), Expect = 0.021
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 76 aaactcctccaaatcaatt 94
|||||||||||||||||||
Sbjct: 3076 aaactcctccaaatcaatt 3094


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,069
Number of Sequences: 6905
Number of extensions: 15069
Number of successful extensions: 1567
Number of sequences better than 10.0: 138
length of query: 1197
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1181
effective length of database: 5,564,391
effective search space: 6571545771
effective search space used: 6571545771
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.20
Homology vs DNA
Query= Contig-U10479-1 (Contig-U10479-1Q) /CSM_Contig/Contig-U10479-1Q.Seq.d
(1197 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AY159039) Dictyostelium discoideum LvsC (lvsC) gene, comple... 1582 0.0 1
(BJ416038) Dictyostelium discoideum cDNA clone:ddv24n14, 5' ... 1310 0.0 1
(BJ434690) Dictyostelium discoideum cDNA clone:ddv24n14, 3' ... 1302 0.0 1
(CZ227972) AIAA-aad77h09.b1 Ancylostoma caninum whole genome... 36 2.1 2
(CZ223375) AIAA-aah47o20.b1 Ancylostoma caninum whole genome... 36 2.1 2
(BV428469) S237P6362RF12.T0 PortugueseWaterDog Canis familia... 34 2.1 2
(EY401259) pOP-CNH02563_EST_C_1_pSK_SK CNH (Oil Palm Non-Emb... 40 2.1 2
(U97001) Caenorhabditis elegans cosmid K08B12, complete sequ... 46 2.6 3
(AC186117) Callicebus moloch clone LB5-387D21, WORKING DRAFT... 46 3.1 1
(AC006740) Caenorhabditis elegans clone Y38B5, *** SEQUENCIN... 46 3.1 1
(FH365876) CHO_OF4480xf14r1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 3.1 1
(FH338742) CHO_OF4603xm05f1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 3.1 1
(CO202110) Cs_wim_02A03_SAC Cs_wim Cupiennius salei cDNA clo... 46 3.1 1
(BB706374) Mus musculus in vitro fertilized eggs cDNA, RIKEN... 46 3.1 1
(BX920923) Sus Scrofa library (scan) clone scan0004.n.09, 5p... 42 3.1 2
(CU633688) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 5.7 2
(EK016580) 1092955237914 Global-Ocean-Sampling_GS-31-01-01-1... 36 5.8 3
(EK170540) 1095458071933 Global-Ocean-Sampling_GS-31-01-01-1... 32 7.8 2
(CL383568) RPCI44_326D22.r RPCI-44 Sus scrofa genomic clone ... 34 7.8 2
(CL386495) RPCI44_334M16.f RPCI-44 Sus scrofa genomic clone ... 42 8.1 2

>(AY159039) Dictyostelium discoideum LvsC (lvsC) gene, complete cds.
Length = 9001

Score = 1582 bits (798), Expect = 0.0
Identities = 798/798 (100%)
Strand = Plus / Plus


Query: 16 tttcaaagaaacatcatattcaacgtgatcctttgaacgaatctcatatctcaattttga 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7187 tttcaaagaaacatcatattcaacgtgatcctttgaacgaatctcatatctcaattttga 7246


Query: 76 aaactcctccaaatcaattacaagcttactttttaaagattaccaataagaatccaatcg 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7247 aaactcctccaaatcaattacaagcttactttttaaagattaccaataagaatccaatcg 7306


Query: 136 tttacgtttacattccagagccaaatccaatcatgtcctatttggttgctgataaagtta 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7307 tttacgtttacattccagagccaaatccaatcatgtcctatttggttgctgataaagtta 7366


Query: 196 cggtcattgataaatctagaaccactaccaatcataaatggttcccttccactccaaatg 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7367 cggtcattgataaatctagaaccactaccaatcataaatggttcccttccactccaaatg 7426


Query: 256 ataagatctcaccattcacttttgaattggatccatcttcaaccactaaacgtagaattg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7427 ataagatctcaccattcacttttgaattggatccatcttcaaccactaaacgtagaattg 7486


Query: 316 gtttaccatttgcaaatgatgtaacaatctctccaaattgttttgctatcacctctgatg 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7487 gtttaccatttgcaaatgatgtaacaatctctccaaattgttttgctatcacctctgatg 7546


Query: 376 gtagatatgttattagttgtgctcattgggataatagtttcaaactatcatttgttgata 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7547 gtagatatgttattagttgtgctcattgggataatagtttcaaactatcatttgttgata 7606


Query: 436 gtgcaaaattaattcaaagtgttgtaaaacataaagatactgtcacttgtttatctttgg 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7607 gtgcaaaattaattcaaagtgttgtaaaacataaagatactgtcacttgtttatctttgg 7666


Query: 496 cttctgatggtcaaactttaatcactggttcaaaagatacaaccgtaatggtttggagaa 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7667 cttctgatggtcaaactttaatcactggttcaaaagatacaaccgtaatggtttggagaa 7726


Query: 556 ttgcaacaaccaataaaagtggtgctccaaaattcaatgatgtacctgatcatattcttt 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7727 ttgcaacaaccaataaaagtggtgctccaaaattcaatgatgtacctgatcatattcttt 7786


Query: 616 atggtcatgatgatgaaatcacctgtgtagatgtaaatgttggtttagatatctctatct 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7787 atggtcatgatgatgaaatcacctgtgtagatgtaaatgttggtttagatatctctatct 7846


Query: 676 ctggttcaaaagatggtacttgtatcattcacaacttaaaacatggtgaatatgttagat 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7847 ctggttcaaaagatggtacttgtatcattcacaacttaaaacatggtgaatatgttagat 7906


Query: 736 caatttatttaccaagacaatctccaattagtttaattgcaatttcaaatcaaggttata 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7907 caatttatttaccaagacaatctccaattagtttaattgcaatttcaaatcaaggttata 7966


Query: 796 ttgtaatttattcacaag 813
||||||||||||||||||
Sbjct: 7967 ttgtaatttattcacaag 7984

Score = 682 bits (344), Expect = 0.0
Identities = 344/344 (100%)
Strand = Plus / Plus


Query: 813 gccgatttaatgatttatctatacagtataaatggtggactcttgaaaacagttgataca 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8421 gccgatttaatgatttatctatacagtataaatggtggactcttgaaaacagttgataca 8480


Query: 873 cacgaaagattacatagtattataataagtaaagattcagagtatttaattactggtggc 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8481 cacgaaagattacatagtattataataagtaaagattcagagtatttaattactggtggc 8540


Query: 933 gaaagaggggttgttgttattagaacacttttcaatttaaaaccaactaatcataaatta 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8541 gaaagaggggttgttgttattagaacacttttcaatttaaaaccaactaatcataaatta 8600


Query: 993 gtgtttggaactccaattcattctttagccatggcatccgatcaaaaacatttaatggtt 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8601 gtgtttggaactccaattcattctttagccatggcatccgatcaaaaacatttaatggtt 8660


Query: 1053 ggtttagaagatggtagattattaattattgcatctaatggtgcatctcctccaacaaat 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8661 ggtttagaagatggtagattattaattattgcatctaatggtgcatctcctccaacaaat 8720


Query: 1113 tattatccattaccaaattcctcatcttcattagtttcatcatc 1156
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8721 tattatccattaccaaattcctcatcttcattagtttcatcatc 8764

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,352,596,893
Number of extensions: 77596625
Number of successful extensions: 5923390
Number of sequences better than 10.0: 22
Length of query: 1197
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1173
Effective length of database: 97,308,875,965
Effective search space: 114143311506945
Effective search space used: 114143311506945
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.28
Homology vs Protein
Query= Contig-U10479-1 (Contig-U10479-1Q) /CSM_Contig/Contig-U10479-1Q.Seq.d
(1197 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AY159039_1(AY159039|pid:none) Dictyostelium discoideum LvsC (lvs... 544 e-153
AC079131_15(AC079131|pid:none) Arabidopsis thaliana chromosome 1... 197 6e-49
AC073943_6(AC073943|pid:none) Arabidopsis thaliana chromosome 1 ... 197 6e-49
AK041108_1(AK041108|pid:none) Mus musculus adult male aorta and ... 196 1e-48
AK129158_1(AK129158|pid:none) Mus musculus premature mRNA for mK... 188 4e-46
BC157956_1(BC157956|pid:none) Mus musculus neurobeachin-like 2, ... 188 4e-46
(Q6ZQA0) RecName: Full=Neurobeachin-like protein 2; 188 4e-46
BC166673_1(BC166673|pid:none) Synthetic construct Homo sapiens c... 182 3e-44
AK301269_1(AK301269|pid:none) Homo sapiens cDNA FLJ50251 complet... 174 6e-42
(Q6ZNJ1) RecName: Full=Neurobeachin-like protein 2; &AB384492_1... 174 6e-42
AB011112_1(AB011112|pid:none) Homo sapiens mRNA for KIAA0540 pro... 174 6e-42
AY358455_1(AY358455|pid:none) Homo sapiens clone DNA35680 SQFE25... 164 4e-39
(Q54RQ8) RecName: Full=BEACH domain-containing protein lvsE; 163 1e-38
AP004126_22(AP004126|pid:none) Oryza sativa Japonica Group genom... 160 8e-38
AF467287_1(AF467287|pid:none) Homo sapiens beige-like protein (L... 159 1e-37
AK031216_1(AK031216|pid:none) Mus musculus 13 days embryo foreli... 158 3e-37
AF187731_1(AF187731|pid:none) Mus musculus LBA (Lba) mRNA, compl... 158 3e-37
AE014296_841(AE014296|pid:none) Drosophila melanogaster chromoso... 153 1e-35
AE014298_739(AE014298|pid:none) Drosophila melanogaster chromoso... 152 2e-35
(Q9W4E2) RecName: Full=Neurobeachin; AltName: Full=Protein rugos... 152 2e-35
AE014298_732(AE014298|pid:none) Drosophila melanogaster chromoso... 152 2e-35
AE014298_738(AE014298|pid:none) Drosophila melanogaster chromoso... 152 2e-35
Y18278_1(Y18278|pid:none) Drosophila melanogaster mRNA for A-kin... 152 2e-35
BX640760_1(BX640760|pid:none) Homo sapiens mRNA; cDNA DKFZp686I0... 151 4e-35
AL139083_1(AL139083|pid:none) Human DNA sequence from clone RP11... 150 1e-34
AB046764_1(AB046764|pid:none) Homo sapiens mRNA for KIAA1544 pro... 150 1e-34
AK091469_1(AK091469|pid:none) Homo sapiens cDNA FLJ34150 fis, cl... 150 1e-34
AK122888_1(AK122888|pid:none) Homo sapiens cDNA FLJ16538 fis, cl... 150 1e-34
BC172597_1(BC172597|pid:none) Synthetic construct Homo sapiens c... 150 1e-34
AK043125_1(AK043125|pid:none) Mus musculus 7 days neonate cerebe... 150 1e-34
AL138690_1(AL138690|pid:none) Human DNA sequence from clone RP11... 150 1e-34
(Q8NFP9) RecName: Full=Neurobeachin; AltName: Full=Lysosomal-tra... 150 1e-34
AK294737_1(AK294737|pid:none) Homo sapiens cDNA FLJ53986 complet... 150 1e-34
Y18276_3(Y18276|pid:none) Mus musculus mRNA for neurobeachin. 150 1e-34
Y18276_2(Y18276|pid:none) Mus musculus mRNA for neurobeachin. 150 1e-34
AK127791_1(AK127791|pid:none) Homo sapiens cDNA FLJ45892 fis, cl... 147 6e-34
BC091668_1(BC091668|pid:none) Danio rerio zgc:113510, mRNA (cDNA... 145 2e-33
AF072371_1(AF072371|pid:none) Homo sapiens lysosomal trafficking... 143 1e-32
CR954204_363(CR954204|pid:none) Ostreococcus tauri strain OTTH05... 139 2e-31
CP000584_333(CP000584|pid:none) Ostreococcus lucimarinus CCE9901... 127 8e-28
AB053319_1(AB053319|pid:none) Homo sapiens ALS2CR17 mRNA, partia... 114 9e-24
AC003680_7(AC003680|pid:none) Arabidopsis thaliana chromosome 2 ... 108 3e-22
AL606647_4(AL606647|pid:none) Oryza sativa genomic DNA, chromoso... 107 1e-21
(A8XSV3) RecName: Full=Putative neurobeachin homolog; AltName: F... 103 9e-21
T20719(T20719;T21812)hypothetical protein F10F2.1 - Caenorhabdit... 101 6e-20
AY159040_1(AY159040|pid:none) Dictyostelium discoideum LvsD (lvs... 92 4e-17
AC116982_52(AC116982|pid:none) Dictyostelium discoideum chromoso... 92 4e-17
AC1842(AC1842) WD-40 repeat protein [imported] - Nostoc sp. (str... 81 8e-14
CP000806_1073(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 79 2e-13
CP001291_3285(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 79 2e-13
CP001037_1432(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 79 3e-13
AP009552_6258(AP009552|pid:none) Microcystis aeruginosa NIES-843... 77 1e-12
AP009552_3821(AP009552|pid:none) Microcystis aeruginosa NIES-843... 77 1e-12
AG2400(AG2400) WD-repeat protein [imported] - Nostoc sp. (strain... 76 3e-12
CP001037_148(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 75 5e-12
AB271946_1(AB271946|pid:none) Sus scrofa LYST mRNA for lysosomal... 75 6e-12
AE013599_2876(AE013599|pid:none) Drosophila melanogaster chromos... 74 1e-11
CP000117_1538(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 74 1e-11
CP001108_1939(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 73 2e-11
(Q99698) RecName: Full=Lysosomal-trafficking regulator; AltName:... 73 2e-11
AL121997_1(AL121997|pid:none) Human DNA sequence from clone RP5-... 73 2e-11
A43289(A43289;S30330)CDC4L protein - human (fragment) 73 2e-11
M83822_1(M83822|pid:none) Human beige-like protein (BGL) mRNA, p... 73 2e-11
CP001037_247(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 73 2e-11
BT052263_1(BT052263|pid:none) Medicago truncatula clone MTYF9_FA... 72 3e-11
CP001291_2528(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 72 3e-11
AK051786_1(AK051786|pid:none) Mus musculus 12 days embryo spinal... 72 5e-11
AM494972_191(AM494972|pid:none) Leishmania braziliensis chromoso... 71 7e-11
CP000108_212(CP000108|pid:none) Chlorobium chlorochromatii CaD3,... 71 9e-11
AJ010592_156(AJ010592|pid:none) Guillardia theta DNA for complet... 71 9e-11
(Q5M786) RecName: Full=WD repeat-containing protein 5; &BC08100... 70 1e-10
CP001291_1475(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 70 1e-10
AJ011376_1(AJ011376|pid:none) Homo sapiens mRNA for hypothetical... 70 1e-10
BC077844_1(BC077844|pid:none) Xenopus laevis WD repeat domain 5,... 70 1e-10
AM502254_425(AM502254|pid:none) Leishmania infantum chromosome 36. 70 1e-10
AM746676_3634(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 70 1e-10
(Q2KIG2) RecName: Full=WD repeat-containing protein 5; &BC11265... 70 1e-10
AK144091_1(AK144091|pid:none) Mus musculus RCB-0559 K-1 . F1 cDN... 70 1e-10
CP000393_3924(CP000393|pid:none) Trichodesmium erythraeum IMS101... 70 1e-10
CP000117_2838(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 70 2e-10
(Q5RE95) RecName: Full=WD repeat-containing protein 5B; &CR8576... 70 2e-10
AB093277_1(AB093277|pid:none) Mus musculus mRNA for mKIAA0993 pr... 70 2e-10
(Q9D7H2) RecName: Full=WD repeat-containing protein 5B; &AK0092... 69 2e-10
BA000045_2244(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 69 3e-10
AH2195(AH2195) hypothetical protein alr3119 [imported] - Nostoc ... 69 3e-10
CP001291_1144(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 68 6e-10
AY159037_1(AY159037|pid:none) Dictyostelium discoideum LvsF (lvs... 68 6e-10
CP000393_1925(CP000393|pid:none) Trichodesmium erythraeum IMS101... 68 6e-10
CP001037_4354(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 68 6e-10
BC052124_1(BC052124|pid:none) Danio rerio WD repeat domain 5, mR... 68 6e-10
CP000117_2178(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 68 7e-10
FN318148_1(FN318148|pid:none) Schistosoma japonicum isolate Anhu... 67 9e-10
CP000807_36(CP000807|pid:none) Cyanothece sp. ATCC 51142 linear ... 67 9e-10
AK002149_1(AK002149|pid:none) Homo sapiens cDNA FLJ11287 fis, cl... 67 1e-09
CP000845_57(CP000845|pid:none) Acaryochloris marina MBIC11017 pl... 67 1e-09
BC065502_1(BC065502|pid:none) Homo sapiens WD repeat and FYVE do... 67 2e-09
AK003694_1(AK003694|pid:none) Mus musculus 18-day embryo whole b... 67 2e-09
AK055806_1(AK055806|pid:none) Homo sapiens cDNA FLJ31244 fis, cl... 67 2e-09
BC150246_1(BC150246|pid:none) Homo sapiens WD repeat and FYVE do... 67 2e-09
CT005272_177(CT005272|pid:none) Leishmania major strain Friedlin... 67 2e-09
(Q9Y2J7) RecName: Full=WD repeat and FYVE domain-containing prot... 67 2e-09
CP000119_130(CP000119|pid:none) Anabaena variabilis ATCC 29413 p... 66 2e-09
AL928828_1(AL928828|pid:none) Zebrafish DNA sequence from clone ... 66 2e-09
BC047574_1(BC047574|pid:none) Homo sapiens WDFY family member 4,... 66 3e-09
AK301736_1(AK301736|pid:none) Homo sapiens cDNA FLJ53625 complet... 66 3e-09
BC015694_1(BC015694|pid:none) Homo sapiens WDFY family member 4,... 66 3e-09
AB046827_1(AB046827|pid:none) Homo sapiens mRNA for KIAA1607 pro... 66 3e-09
BC032420_1(BC032420|pid:none) Homo sapiens WDFY family member 4,... 66 3e-09
CR382138_945(CR382138|pid:none) Debaryomyces hansenii strain CBS... 65 4e-09
EF083131_1(EF083131|pid:none) Picea sitchensis clone WS02722_J02... 65 4e-09
AC166286_7(AC166286|pid:none) Medicago truncatula clone mth2-173... 65 4e-09
CP000502_174(CP000502|pid:none) Pichia stipitis CBS 6054 chromos... 65 4e-09
AC006550_12(AC006550|pid:none) Arabidopsis thaliana chromosome 1... 65 4e-09
EU049596_1(EU049596|pid:none) Branchiostoma floridae Bf-TIR-NBAR... 65 5e-09
CP000686_859(CP000686|pid:none) Roseiflexus sp. RS-1, complete g... 65 5e-09
CP000828_20(CP000828|pid:none) Acaryochloris marina MBIC11017, c... 65 5e-09
CP000117_4826(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 65 6e-09
AM778942_51(AM778942|pid:none) Microcystis aeruginosa PCC 7806 g... 65 6e-09
AK105499_1(AK105499|pid:none) Oryza sativa Japonica Group cDNA c... 65 6e-09
CP000492_814(CP000492|pid:none) Chlorobium phaeobacteroides DSM ... 65 6e-09
AE014134_1026(AE014134|pid:none) Drosophila melanogaster chromos... 65 6e-09
EF677877_1(EF677877|pid:none) Picea sitchensis clone WS0277_A02 ... 65 6e-09
AM920435_1436(AM920435|pid:none) Penicillium chrysogenum Wiscons... 64 8e-09
CP000839_340(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 64 8e-09
CP001101_2134(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 64 8e-09
CP000117_3846(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 64 8e-09
AM778936_12(AM778936|pid:none) Microcystis aeruginosa PCC 7806 g... 64 1e-08
FN392320_453(FN392320|pid:none) Pichia pastoris GS115 chromosome... 64 1e-08
AM778957_201(AM778957|pid:none) Microcystis aeruginosa PCC 7806 ... 64 1e-08
CP001037_6067(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 64 1e-08
CP000393_3289(CP000393|pid:none) Trichodesmium erythraeum IMS101... 64 1e-08
BA000039_488(BA000039|pid:none) Thermosynechococcus elongatus BP... 63 2e-08
CP001037_1497(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 63 2e-08
CP000828_5917(CP000828|pid:none) Acaryochloris marina MBIC11017,... 63 2e-08
AM462218_2(AM462218|pid:none) Vitis vinifera contig VV78X125617.... 63 2e-08
AM270005_42(AM270005|pid:none) Aspergillus niger contig An02c010... 63 2e-08
CP000828_5861(CP000828|pid:none) Acaryochloris marina MBIC11017,... 63 2e-08
FM992694_112(FM992694|pid:none) Candida dubliniensis CD36 chromo... 63 2e-08
AK173214_1(AK173214|pid:none) Mus musculus mRNA for mKIAA1607 pr... 62 3e-08
(Q17963) RecName: Full=WD repeat-containing protein tag-125; &T... 62 3e-08
CP000828_5196(CP000828|pid:none) Acaryochloris marina MBIC11017,... 62 3e-08
(Q09715) RecName: Full=Transcriptional repressor tup11; &CU3296... 62 3e-08
AK155186_1(AK155186|pid:none) Mus musculus NOD-derived CD11c +ve... 62 3e-08
AP007159_390(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 62 4e-08
AM746676_8405(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 62 4e-08
CP001037_5275(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 62 4e-08
CP000117_1553(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 62 4e-08
CP000473_4977(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 62 4e-08
AD1842(AD1842) WD-40 repeat protein [imported] - Nostoc sp. (str... 62 5e-08
CP001037_2020(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 62 5e-08
AG1889(AG1889) WD-40 repeat protein [imported] - Nostoc sp. (str... 62 5e-08
CP000806_3920(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 62 5e-08
AE017348_264(AE017348|pid:none) Cryptococcus neoformans var. neo... 62 5e-08
CP001037_1914(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 62 5e-08
CP001110_343(CP001110|pid:none) Pelodictyon phaeoclathratiforme ... 61 7e-08
CP001037_1323(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 61 7e-08
AY080732_1(AY080732|pid:none) Arabidopsis thaliana unknown prote... 61 7e-08
CP001037_139(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 61 7e-08
CP000393_145(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 61 9e-08
CP000393_3425(CP000393|pid:none) Trichodesmium erythraeum IMS101... 60 1e-07
CP000828_167(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 60 1e-07
BC015214_1(BC015214|pid:none) Homo sapiens WD repeat and FYVE do... 60 2e-07
CU633438_311(CU633438|pid:none) Podospora anserina genomic DNA c... 60 2e-07
AM778958_177(AM778958|pid:none) Microcystis aeruginosa PCC 7806 ... 60 2e-07
CP001037_4818(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 60 2e-07
CP001291_5177(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 60 2e-07
AE016818_101(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 59 3e-07
CP000117_2804(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 59 3e-07
AC002330_7(AC002330|pid:none) Arabidopsis thaliana BAC T10P11 fr... 59 3e-07
AX887643_1(AX887643|pid:none) Sequence 3506 from Patent EP1033401. 59 3e-07
AM270128_22(AM270128|pid:none) Aspergillus niger contig An07c010... 59 3e-07
AL132976_23(AL132976|pid:none) Arabidopsis thaliana DNA chromoso... 59 3e-07
CR848547_1(CR848547|pid:none) Xenopus tropicalis finished cDNA, ... 59 3e-07
BT030030_1(BT030030|pid:none) Arabidopsis thaliana At3g50390 mRN... 59 3e-07
CP000117_4653(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 59 4e-07
CP001037_5630(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 59 4e-07
CP000806_2172(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 59 4e-07
CP000820_1838(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 58 6e-07
BT055858_1(BT055858|pid:none) Zea mays full-length cDNA clone ZM... 58 6e-07
AE1810(AE1810) WD-40 repeat protein [imported] - Nostoc sp. (str... 58 6e-07
CU633454_82(CU633454|pid:none) Podospora anserina genomic DNA ch... 58 6e-07
AP009552_1527(AP009552|pid:none) Microcystis aeruginosa NIES-843... 58 6e-07
BX294149_264(BX294149|pid:none) Rhodopirellula baltica SH 1 comp... 58 8e-07
DQ647383_1(DQ647383|pid:none) Chlamydomonas reinhardtii lissence... 58 8e-07
T26919(T26919)hypothetical protein Y45F10B.10 - Caenorhabditis e... 58 8e-07
AC091246_8(AC091246|pid:none) Oryza sativa (japonica cultivar-gr... 58 8e-07
AL021487_4(AL021487|pid:none) Caenorhabditis elegans YAC Y45F10B... 58 8e-07
AM989989_35(AM989989|pid:none) Zygosaccharomyces rouxii strain C... 58 8e-07
CP000828_160(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 58 8e-07
CP000117_2876(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 57 1e-06
AH2154(AH2154) WD-repeat protein [imported] - Nostoc sp. (strain... 57 1e-06
BA000040_5485(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 57 1e-06
FN357364_26(FN357364|pid:none) Schistosoma mansoni genome sequen... 57 1e-06
(P25382) RecName: Full=WD repeat-containing protein YCR072C; &A... 57 1e-06
CP000117_2141(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 57 1e-06
S19487(S19487;S26657)hypothetical protein YCR072c - yeast (Sacch... 57 1e-06
CR382128_858(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 57 1e-06
AE014296_1234(AE014296|pid:none) Drosophila melanogaster chromos... 57 1e-06
AL078635_13(AL078635|pid:none) Amycolatopsis orientalis cosmid p... 57 1e-06
CP000686_3299(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 57 1e-06
CP000117_2488(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 57 1e-06
AY089248_1(AY089248|pid:none) Drosophila melanogaster AT03371 fu... 57 1e-06
AK016201_1(AK016201|pid:none) Mus musculus adult male testis cDN... 57 2e-06
AM270205_6(AM270205|pid:none) Aspergillus niger contig An09c0160... 57 2e-06
CP000393_2151(CP000393|pid:none) Trichodesmium erythraeum IMS101... 57 2e-06
AE016818_604(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 57 2e-06
CP000117_5003(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 57 2e-06
FN357410_12(FN357410|pid:none) Schistosoma mansoni genome sequen... 57 2e-06
(Q7LKZ7) RecName: Full=Beige protein homolog 1; &AL031261_2(AL0... 57 2e-06
(Q93847) RecName: Full=Uncharacterized WD repeat-containing prot... 56 2e-06
CU928169_531(CU928169|pid:none) Kluyveromyces thermotolerans str... 56 2e-06
AM441735_1(AM441735|pid:none) Vitis vinifera contig VV78X156877.... 56 2e-06
BA000012_2184(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 56 2e-06
CP001037_1947(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 56 2e-06
CP000686_3296(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 56 2e-06
CP000117_2617(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 56 2e-06
AM494954_21(AM494954|pid:none) Leishmania braziliensis chromosom... 56 2e-06
AL021106_8(AL021106|pid:none) Drosophila melanogaster cosmid clo... 56 3e-06
(P49695) RecName: Full=Probable serine/threonine-protein kinase ... 56 3e-06
AK304767_1(AK304767|pid:none) Homo sapiens cDNA FLJ54259 complet... 56 3e-06
AK145982_1(AK145982|pid:none) Mus musculus 13 days pregnant adul... 56 3e-06
(Q6NRT3) RecName: Full=WD40 repeat-containing protein SMU1; AltN... 56 3e-06
AP009552_1750(AP009552|pid:none) Microcystis aeruginosa NIES-843... 56 3e-06
AY892191_1(AY892191|pid:none) Synthetic construct Homo sapiens c... 56 3e-06
(Q2TAY7) RecName: Full=WD40 repeat-containing protein SMU1; AltN... 56 3e-06
AM494957_410(AM494957|pid:none) Leishmania braziliensis chromoso... 56 3e-06
AF1890(AF1890) WD-repeat protein [imported] - Nostoc sp. (strain... 56 3e-06
AY547291_1(AY547291|pid:none) Toxoplasma gondii receptor for act... 55 4e-06
(Q8YTC2) RecName: Full=Uncharacterized WD repeat-containing prot... 55 4e-06
FN392321_619(FN392321|pid:none) Pichia pastoris GS115 chromosome... 55 4e-06
AY737531_1(AY737531|pid:none) Toxoptera citricida putative activ... 55 4e-06
AC151523_14(AC151523|pid:none) Medicago truncatula chromosome 7 ... 55 4e-06
CP001097_2083(CP001097|pid:none) Chlorobium limicola DSM 245, co... 55 4e-06
AF407335_1(AF407335|pid:none) Lentinula edodes guanine nucleotid... 55 4e-06
AL031517_6(AL031517|pid:none) S.pombe chromosome II cosmid c28E1... 55 4e-06
AM910987_42(AM910987|pid:none) Plasmodium knowlesi strain H chro... 55 5e-06
CP001291_1208(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 55 5e-06
AB022686_1(AB022686|pid:none) Solanum lycopersicum mRNA for LeAr... 55 5e-06
(Q5ZME8) RecName: Full=WD40 repeat-containing protein SMU1; AltN... 55 5e-06
U77381_1(U77381|pid:none) Arabidopsis thaliana WD-40 repeat prot... 55 5e-06
CP001099_247(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ... 55 5e-06
CP000844_164(CP000844|pid:none) Acaryochloris marina MBIC11017 p... 55 5e-06
CP000882_18(CP000882|pid:none) Hemiselmis andersenii chromosome ... 55 6e-06
AE014298_287(AE014298|pid:none) Drosophila melanogaster chromoso... 55 6e-06
DQ073455_1(DQ073455|pid:none) Choristoneura fumiferana activated... 55 6e-06
AP009552_5466(AP009552|pid:none) Microcystis aeruginosa NIES-843... 55 6e-06
BC044361_1(BC044361|pid:none) Danio rerio RNA, U3 small nucleola... 55 6e-06
AJ004807_1(AJ004807|pid:none) Nicotiana tabacum xanthi arcA 3 ge... 55 6e-06
U96491_1(U96491|pid:none) Drosophila melanogaster RACK1 (rack1) ... 55 6e-06
(Q54Y96) RecName: Full=WD40 repeat-containing protein smu1; 55 6e-06
BT061165_1(BT061165|pid:none) Zea mays full-length cDNA clone ZM... 55 6e-06
CU074270_1(CU074270|pid:none) Podospora anserina genomic DNA, NW... 55 6e-06
AY094880_1(AY094880|pid:none) Drosophila melanogaster RE49866 fu... 55 6e-06
AJ001774_6(AJ001774|pid:none) Anabaena sp. PCC 7120 DNA downstre... 55 6e-06
AB189027_1(AB189027|pid:none) Plutella xylostella mRNA for recep... 55 6e-06
FN392319_762(FN392319|pid:none) Pichia pastoris GS115 chromosome... 55 6e-06
AP007169_506(AP007169|pid:none) Aspergillus oryzae RIB40 genomic... 55 6e-06
EU961646_1(EU961646|pid:none) Zea mays clone 237328 unknown mRNA. 55 6e-06
AC073555_19(AC073555|pid:none) Arabidopsis thaliana chromosome 1... 54 8e-06
BA000045_4356(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 54 8e-06
BA000037_3038(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, ch... 54 8e-06
AP007169_1(AP007169|pid:none) Aspergillus oryzae RIB40 genomic D... 54 8e-06
CR382135_388(CR382135|pid:none) Debaryomyces hansenii strain CBS... 54 8e-06
(Q9C1X1) RecName: Full=Periodic tryptophan protein 2 homolog; &... 54 8e-06
AY342000_1(AY342000|pid:none) Oreochromis mossambicus receptor f... 54 1e-05
BT039976_1(BT039976|pid:none) Zea mays full-length cDNA clone ZM... 54 1e-05
AY082798_1(AY082798|pid:none) Penicillium marneffei TupA protein... 54 1e-05
FN368966_1(FN368966|pid:none) Schistosoma mansoni genome sequenc... 54 1e-05
AC146759_31(AC146759|pid:none) Medicago truncatula clone mth2-17... 54 1e-05
EU952736_1(EU952736|pid:none) Zea mays clone 1287276 guanine nuc... 54 1e-05
BT055706_1(BT055706|pid:none) Zea mays full-length cDNA clone ZM... 54 1e-05
AY130394_1(AY130394|pid:none) Petromyzon marinus guanine nucleot... 54 1e-05
BT088239_1(BT088239|pid:none) Zea mays full-length cDNA clone ZM... 54 1e-05
CP000854_3359(CP000854|pid:none) Mycobacterium marinum M, comple... 54 1e-05
BT058435_1(BT058435|pid:none) Salmo salar clone Contig699 Guanin... 54 1e-05
AM270259_12(AM270259|pid:none) Aspergillus niger contig An12c002... 54 1e-05
(Q5REE0) RecName: Full=U3 small nucleolar RNA-associated protein... 54 1e-05
AE017343_631(AE017343|pid:none) Cryptococcus neoformans var. neo... 54 1e-05
AB089281_1(AB089281|pid:none) Mamestra brassicae mRNA for recept... 54 1e-05
CP000839_184(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 54 1e-05
FJ943495_1(FJ943495|pid:none) Bombyx mori receptor for activated... 54 1e-05
BC124403_1(BC124403|pid:none) Danio rerio WD repeat domain 69, m... 54 1e-05
FN357317_8(FN357317|pid:none) Schistosoma mansoni genome sequenc... 54 1e-05
AM472166_2(AM472166|pid:none) Vitis vinifera contig VV78X131919.... 54 1e-05
T22703(T22703)hypothetical protein F55B12.3 - Caenorhabditis ele... 53 2e-05
(Q93794) RecName: Full=F-box/WD repeat-containing protein sel-10... 53 2e-05
AY812851_1(AY812851|pid:none) Schistosoma japonicum SJCHGC09299 ... 53 2e-05
AI2493(AI2493) WD-repeat protein [imported] - Nostoc sp. (strain... 53 2e-05
U53881_1(U53881|pid:none) Saccharomyces cerevisiae chromosome XI... 53 2e-05
CP001038_141(CP001038|pid:none) Nostoc punctiforme PCC 73102 pla... 53 2e-05
(P25387) RecName: Full=Guanine nucleotide-binding protein subuni... 53 2e-05
AF047651_1(AF047651|pid:none) Caenorhabditis elegans cosmid C05D... 53 2e-05
(P16649) RecName: Full=General transcriptional corepressor TUP1;... 53 2e-05
AM920436_1696(AM920436|pid:none) Penicillium chrysogenum Wiscons... 53 2e-05
(Q7ZVA0) RecName: Full=WD40 repeat-containing protein SMU1; AltN... 53 2e-05
(Q12220) RecName: Full=U3 small nucleolar RNA-associated protein... 53 2e-05
M31733_1(M31733|pid:none) S.cerevisiae TUP1 protein gene, comple... 53 2e-05
AB264263_1(AB264263|pid:none) Chamaecyparis pisifera CC2196 gene... 53 2e-05
AB246881_1(AB246881|pid:none) Lethenteron japonicum GNB2L1 mRNA ... 53 2e-05
X16365_1(X16365|pid:none) Yeast suppressor gene for flocculation... 53 2e-05
(P38011) RecName: Full=Guanine nucleotide-binding protein subuni... 53 2e-05
(Q1LV15) RecName: Full=WD repeat-containing protein 69; &BC1244... 53 2e-05
AP007150_220(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 53 2e-05
AM426608_3(AM426608|pid:none) Vitis vinifera contig VV78X010792.... 53 2e-05
AF323582_1(AF323582|pid:none) Podospora anserina beta transducin... 53 2e-05
AM502235_26(AM502235|pid:none) Leishmania infantum chromosome 17. 53 2e-05
CR382138_176(CR382138|pid:none) Debaryomyces hansenii strain CBS... 53 2e-05
BA000045_725(BA000045|pid:none) Gloeobacter violaceus PCC 7421 D... 53 2e-05
CP001037_2838(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 53 2e-05
(Q61FW2) RecName: Full=F-box/WD repeat-containing protein sel-10... 53 2e-05
BC150407_1(BC150407|pid:none) Danio rerio guanine nucleotide bin... 53 2e-05
CR380959_230(CR380959|pid:none) Candida glabrata strain CBS138 c... 53 2e-05
AF323584_1(AF323584|pid:none) Podospora anserina beta transducin... 53 2e-05
AB023034_9(AB023034|pid:none) Arabidopsis thaliana genomic DNA, ... 53 2e-05
BA000045_4351(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 53 2e-05
AB264266_1(AB264266|pid:none) Chamaecyparis obtusa CC2196 gene f... 53 2e-05
BT043532_1(BT043532|pid:none) Salmo salar clone HM4_1707 guanine... 53 2e-05
H84914(H84914)probable WD-40 repeat protein [imported] - Arabido... 52 3e-05
CU928165_278(CU928165|pid:none) Kluyveromyces thermotolerans str... 52 3e-05
AC002535_27(AC002535|pid:none) Arabidopsis thaliana chromosome 2... 52 3e-05
BC141212_1(BC141212|pid:none) Mus musculus F-box and WD-40 domai... 52 3e-05
CP001037_1143(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 52 3e-05
CU074274_1(CU074274|pid:none) Podospora anserina genomic DNA, NW... 52 3e-05
AL939125_246(AL939125|pid:none) Streptomyces coelicolor A3(2) co... 52 3e-05
FM992688_6(FM992688|pid:none) Candida dubliniensis CD36 chromoso... 52 3e-05
(Q5BK30) RecName: Full=WD repeat-containing protein 69; &BC0912... 52 3e-05
AC002337_25(AC002337|pid:none) Arabidopsis thaliana chromosome 2... 52 3e-05
AM494965_119(AM494965|pid:none) Leishmania braziliensis chromoso... 52 3e-05
(Q8BHD1) RecName: Full=WD repeat-containing protein 51B; &AK045... 52 3e-05
(Q5SUS0) RecName: Full=F-box/WD repeat-containing protein 10; Al... 52 3e-05
AF323583_1(AF323583|pid:none) Podospora anserina beta transducin... 52 3e-05
CU928179_838(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 52 3e-05
(Q00808) RecName: Full=Vegetative incompatibility protein HET-E-... 52 4e-05
FN392319_832(FN392319|pid:none) Pichia pastoris GS115 chromosome... 52 4e-05
AM392737_1(AM392737|pid:none) Synthetic construct Homo sapiens c... 52 4e-05
AL832918_1(AL832918|pid:none) Homo sapiens mRNA; cDNA DKFZp762M0... 52 4e-05
AY032884_1(AY032884|pid:none) Lycopersicon esculentum WD-40 repe... 52 4e-05
AY597210_1(AY597210|pid:none) Chlamydomonas reinhardtii katanin ... 52 4e-05
EU955858_1(EU955858|pid:none) Zea mays clone 1549255 nucleotide ... 52 4e-05
(P49027) RecName: Full=Guanine nucleotide-binding protein subuni... 52 4e-05
AM454828_4(AM454828|pid:none) Vitis vinifera contig VV78X021565.... 52 4e-05
AF125254_1(AF125254|pid:none) Leishmania panamensis activated pr... 52 4e-05
AK302021_1(AK302021|pid:none) Homo sapiens cDNA FLJ57656 complet... 52 4e-05
AC087851_1(AC087851|pid:none) Oryza sativa chromosome 3 BAC OSJN... 52 4e-05
CU928171_512(CU928171|pid:none) Kluyveromyces thermotolerans str... 52 4e-05
AK111863_1(AK111863|pid:none) Oryza sativa Japonica Group cDNA c... 52 4e-05
BT075698_1(BT075698|pid:none) Osmerus mordax clone omor-rgc-001-... 52 4e-05
AC159439_36(AC159439|pid:none) Trypanosoma brucei chromosome 7 c... 52 4e-05
AB169451_1(AB169451|pid:none) Macaca fascicularis testis cDNA, c... 52 4e-05
BC081860_1(BC081860|pid:none) Rattus norvegicus similar to Charc... 52 4e-05
CP000089_3569(CP000089|pid:none) Dechloromonas aromatica RCB, co... 52 5e-05
AP007163_34(AP007163|pid:none) Aspergillus oryzae RIB40 genomic ... 52 5e-05
AE016820_175(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 52 5e-05
AM393545_1(AM393545|pid:none) Synthetic construct Homo sapiens c... 52 5e-05
D29802_1(D29802|pid:none) Mus musculus p205 mRNA for G protein b... 52 5e-05
GQ223794_1(GQ223794|pid:none) Nicotiana benthamiana heterotrimer... 52 5e-05
CR954205_38(CR954205|pid:none) Ostreococcus tauri strain OTTH059... 52 5e-05
DQ885470_1(DQ885470|pid:none) Blattella germanica receptor for a... 52 5e-05
BC110877_1(BC110877|pid:none) Homo sapiens WD repeat domain 51A,... 52 5e-05
AM269977_20(AM269977|pid:none) Aspergillus niger contig An01c030... 52 5e-05
CP000117_2100(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 52 5e-05
AM778950_12(AM778950|pid:none) Microcystis aeruginosa PCC 7806 g... 52 5e-05
BT071278_1(BT071278|pid:none) Picea sitchensis clone WS02817_P12... 52 5e-05
CP001287_1587(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 52 5e-05
AB018110_4(AB018110|pid:none) Arabidopsis thaliana genomic DNA, ... 51 7e-05
CP001325_706(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 51 7e-05
(O24076) RecName: Full=Guanine nucleotide-binding protein subuni... 51 7e-05
AK098821_1(AK098821|pid:none) Homo sapiens cDNA FLJ25955 fis, cl... 51 7e-05
AY159316_1(AY159316|pid:none) Homo sapiens lung cancer oncogene ... 51 7e-05
AJ720209_1(AJ720209|pid:none) Gallus gallus mRNA for hypothetica... 51 7e-05
AP007175_262(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 51 7e-05
BT052685_1(BT052685|pid:none) Medicago truncatula clone MTYFD_FE... 51 7e-05
BC102286_1(BC102286|pid:none) Bos taurus guanine nucleotide bind... 51 7e-05
(P62883) RecName: Full=Guanine nucleotide-binding protein subuni... 51 7e-05
AF034793_1(AF034793|pid:none) Leishmania donovani activated prot... 51 7e-05
(Q8N136) RecName: Full=WD repeat-containing protein 69; &AC0730... 51 7e-05
AK012242_1(AK012242|pid:none) Mus musculus 11 days embryo whole ... 51 7e-05
AY694127_4(AY694127|pid:none) Gallus gallus cosmid c12.1 chromos... 51 7e-05
(Q0P593) RecName: Full=WD repeat-containing protein 69; &BC1203... 51 7e-05
CP000828_671(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 51 7e-05
BC145995_1(BC145995|pid:none) Mus musculus WD repeat domain 69, ... 51 7e-05
AF105259_1(AF105259|pid:none) Xenopus laevis activated protein k... 51 7e-05
AY942841_1(AY942841|pid:none) Philodina sp. NPS-2005 guanine nuc... 51 7e-05
AK301861_1(AK301861|pid:none) Homo sapiens cDNA FLJ54195 complet... 51 7e-05
AF474160_1(AF474160|pid:none) Candida glabrata global repressor ... 51 7e-05
EU906910_1(EU906910|pid:none) Phaseolus vulgaris Rack (RACK) mRN... 51 7e-05
AB264260_1(AB264260|pid:none) Cryptomeria japonica CC2196 gene f... 51 7e-05
BT080073_1(BT080073|pid:none) Esox lucius clone eluc-evq-506-011... 51 7e-05
AB264259_1(AB264259|pid:none) Cryptomeria japonica CC2196 gene f... 51 7e-05
AK074217_1(AK074217|pid:none) Homo sapiens cDNA FLJ23637 fis, cl... 51 7e-05
(Q8TED0) RecName: Full=U3 small nucleolar RNA-associated protein... 51 7e-05
(P63243) RecName: Full=Guanine nucleotide-binding protein subuni... 51 7e-05
AP007164_19(AP007164|pid:none) Aspergillus oryzae RIB40 genomic ... 51 7e-05
AK016977_1(AK016977|pid:none) Mus musculus adult male testis cDN... 51 7e-05
EU016105_1(EU016105|pid:none) Leishmania donovani chagasi activa... 51 7e-05
BT034088_1(BT034088|pid:none) Zea mays full-length cDNA clone ZM... 51 7e-05
(Q25189) RecName: Full=Guanine nucleotide-binding protein subuni... 51 9e-05
(Q5RD06) RecName: Full=WD repeat-containing protein 51B; &CR858... 51 9e-05
AE014134_2770(AE014134|pid:none) Drosophila melanogaster chromos... 51 9e-05
AF127799_1(AF127799|pid:none) Homo sapiens G protein beta subuni... 51 9e-05
AF411979_1(AF411979|pid:none) Homo sapiens WD40- and FYVE-domain... 51 9e-05
CP000828_3726(CP000828|pid:none) Acaryochloris marina MBIC11017,... 51 9e-05
AK300066_1(AK300066|pid:none) Homo sapiens cDNA FLJ53609 complet... 51 9e-05
CP001291_699(CP001291|pid:none) Cyanothece sp. PCC 7424, complet... 51 9e-05
EU290652_1(EU290652|pid:none) Sander vitreus receptor for activa... 51 9e-05
EU957591_1(EU957591|pid:none) Zea mays clone 1598463 nucleotide ... 51 9e-05
AF323585_1(AF323585|pid:none) Podospora anserina beta transducin... 51 9e-05
AL844504_183(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 51 9e-05
AP009552_5491(AP009552|pid:none) Microcystis aeruginosa NIES-843... 51 9e-05
CP000393_3212(CP000393|pid:none) Trichodesmium erythraeum IMS101... 51 9e-05
AB076893_1(AB076893|pid:none) Ciona intestinalis Ci-betaTrCP mRN... 51 9e-05
(Q58D00) RecName: Full=F-box/WD repeat-containing protein 2; Alt... 51 9e-05
AK117650_1(AK117650|pid:none) Arabidopsis thaliana At3g18950 mRN... 51 9e-05
AE014297_2579(AE014297|pid:none) Drosophila melanogaster chromos... 51 9e-05
AM502224_3(AM502224|pid:none) Leishmania infantum chromosome 6. 51 9e-05
AL953881_1(AL953881|pid:none) Zebrafish DNA sequence from clone ... 50 1e-04
CP001327_247(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 50 1e-04
AX722159_1(AX722159|pid:none) Sequence 17 from Patent WO03024999... 50 1e-04
BX510649_2(BX510649|pid:none) Zebrafish DNA sequence from clone ... 50 1e-04
U27537_1(U27537|pid:none) Dictyostelium discoideum G beta like p... 50 1e-04
CR859650_1(CR859650|pid:none) Pongo abelii mRNA; cDNA DKFZp459C1... 50 1e-04
FM992688_764(FM992688|pid:none) Candida dubliniensis CD36 chromo... 50 1e-04
(Q39836) RecName: Full=Guanine nucleotide-binding protein subuni... 50 1e-04
AJ719544_1(AJ719544|pid:none) Gallus gallus mRNA for hypothetica... 50 1e-04
AM269966_5(AM269966|pid:none) Aspergillus niger contig An01c0190... 50 1e-04
AK222488_1(AK222488|pid:none) Homo sapiens mRNA for guanine nucl... 50 1e-04
BT001736_1(BT001736|pid:none) Drosophila melanogaster RE72568 fu... 50 1e-04
AM404081_1(AM404081|pid:none) Mya arenaria Rack1 gene for Recept... 50 1e-04
BC037320_1(BC037320|pid:none) Homo sapiens F-box and WD-40 domai... 50 1e-04
(Q969H0) RecName: Full=F-box/WD repeat-containing protein 7; Alt... 50 1e-04
AK223449_1(AK223449|pid:none) Homo sapiens mRNA for F-box protei... 50 1e-04
AL021960_7(AL021960|pid:none) Arabidopsis thaliana DNA chromosom... 50 1e-04
AF383178_1(AF383178|pid:none) Homo sapiens F-box protein FBX30 m... 50 1e-04
CP000117_173(CP000117|pid:none) Anabaena variabilis ATCC 29413, ... 50 1e-04
CU640366_1258(CU640366|pid:none) Podospora anserina genomic DNA ... 50 2e-04
CP000393_4067(CP000393|pid:none) Trichodesmium erythraeum IMS101... 50 2e-04
CR382137_211(CR382137|pid:none) Debaryomyces hansenii strain CBS... 50 2e-04
AL032675_1(AL032675|pid:none) Caenorhabditis elegans Plasmid VT2... 50 2e-04
CP000390_2419(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 50 2e-04
CP001344_1900(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 50 2e-04
AK154163_1(AK154163|pid:none) Mus musculus NOD-derived CD11c +ve... 50 2e-04
AF357839_1(AF357839|pid:none) Leishmania donovani LACK protectiv... 50 2e-04
CP000393_3433(CP000393|pid:none) Trichodesmium erythraeum IMS101... 50 2e-04
AM270328_15(AM270328|pid:none) Aspergillus niger contig An15c001... 50 2e-04
AK032174_1(AK032174|pid:none) Mus musculus adult male olfactory ... 50 2e-04
EU752722_1(EU752722|pid:none) Populus tremula isolate swl35-54 U... 50 2e-04
BC043833_1(BC043833|pid:none) Xenopus laevis F-box and WD-40 dom... 50 2e-04
CP001100_2468(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 50 2e-04
AL032675_2(AL032675|pid:none) Caenorhabditis elegans Plasmid VT2... 50 2e-04
AJ252128_1(AJ252128|pid:none) Yarrowia lipolytica tup1 gene for ... 50 2e-04
AM472330_1(AM472330|pid:none) Vitis vinifera contig VV79X004925.... 50 2e-04
CP000828_5338(CP000828|pid:none) Acaryochloris marina MBIC11017,... 50 2e-04
CT573213_3533(CT573213|pid:none) Frankia alni str. ACN14A chromo... 50 2e-04
AB174681_1(AB174681|pid:none) Macaca fascicularis brain cDNA clo... 50 2e-04
AL161911_2(AL161911|pid:none) Human DNA sequence from clone RP11... 50 2e-04
(Q6P2Y2) RecName: Full=WD repeat-containing protein 69; &BC0642... 50 2e-04
(O74319) RecName: Full=Transcription initiation factor TFIID sub... 50 2e-04
EU752732_1(EU752732|pid:none) Populus tremula isolate swl35-95 U... 50 2e-04
AM910996_98(AM910996|pid:none) Plasmodium knowlesi strain H chro... 50 2e-04
BC045888_1(BC045888|pid:none) Danio rerio WD repeat domain 51A, ... 50 2e-04
AF017656_1(AF017656|pid:none) Homo sapiens G protein beta 5 subu... 50 2e-04
FM992691_442(FM992691|pid:none) Candida dubliniensis CD36 chromo... 50 2e-04
AE2490(AE2490) WD-repeat protein [imported] - Nostoc sp. (strain... 50 2e-04
CP001332_341(CP001332|pid:none) Micromonas sp. RCC299 chromosome... 50 2e-04
S33263(S33263;S45729;A54593)transcription initiation factor IID-... 50 2e-04
BC142218_1(BC142218|pid:none) Bos taurus guanine nucleotide bind... 50 2e-04
BC086303_1(BC086303|pid:none) Xenopus tropicalis F-box and WD re... 50 2e-04
AB174559_1(AB174559|pid:none) Macaca fascicularis brain cDNA clo... 50 2e-04
(Q9FLX9) RecName: Full=Notchless protein homolog; &AB009055_3(A... 50 2e-04
AM778874_8(AM778874|pid:none) Microcystis aeruginosa PCC 7806 ge... 50 2e-04
CP000828_4622(CP000828|pid:none) Acaryochloris marina MBIC11017,... 50 2e-04
BT045451_1(BT045451|pid:none) Salmo salar clone ssal-rgf-521-347... 50 2e-04
AK290330_1(AK290330|pid:none) Homo sapiens cDNA FLJ78228 complet... 50 2e-04
(O14775) RecName: Full=Guanine nucleotide-binding protein subuni... 50 2e-04
AB209201_1(AB209201|pid:none) Homo sapiens mRNA for WD repeat-co... 50 2e-04
(P49846) RecName: Full=Transcription initiation factor TFIID sub... 50 2e-04
AB170680_1(AB170680|pid:none) Macaca fascicularis brain cDNA clo... 50 2e-04
(Q80ZD0) RecName: Full=Guanine nucleotide-binding protein subuni... 50 2e-04
AY428810_1(AY428810|pid:none) Solanum chacoense notchless-like p... 50 2e-04
AY457171_1(AY457171|pid:none) Leishmania amazonensis antigenic W... 50 2e-04
(Q5RDY7) RecName: Full=Guanine nucleotide-binding protein subuni... 50 2e-04
AY588074_1(AY588074|pid:none) Homalodisca coagulata putative act... 50 2e-04
FM992695_78(FM992695|pid:none) Candida dubliniensis CD36 chromos... 49 3e-04
DQ151642_1(DQ151642|pid:none) Chlamydomonas reinhardtii WD repea... 49 3e-04
(P62882) RecName: Full=Guanine nucleotide-binding protein subuni... 49 3e-04
BC095232_1(BC095232|pid:none) Danio rerio F-box and WD repeat do... 49 3e-04
AM270018_16(AM270018|pid:none) Aspergillus niger contig An02c023... 49 3e-04
AP007151_775(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 49 3e-04
(Q5FWQ6) RecName: Full=WD repeat-containing protein 69; &BC0892... 49 3e-04
AL772282_6(AL772282|pid:none) Mouse DNA sequence from clone RP23... 49 3e-04
(P62881) RecName: Full=Guanine nucleotide-binding protein subuni... 49 3e-04
CR954203_431(CR954203|pid:none) Ostreococcus tauri strain OTTH05... 49 3e-04
AC157978_26(AC157978|pid:none) Medicago truncatula clone mth2-47... 49 3e-04
AM502246_114(AM502246|pid:none) Leishmania infantum chromosome 28. 49 3e-04
CT005245_3(CT005245|pid:none) Leishmania major strain Friedlin, ... 49 3e-04
AE014296_416(AE014296|pid:none) Drosophila melanogaster chromoso... 49 3e-04
AF339101_1(AF339101|pid:none) Heterodera glycines beta-transduci... 49 3e-04
AY874865_1(AY874865|pid:none) Arabidopsis thaliana U3-55K-like p... 49 3e-04
AP007175_233(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 49 3e-04
BC075548_1(BC075548|pid:none) Xenopus tropicalis MGC89488 protei... 49 3e-04

>AY159039_1(AY159039|pid:none) Dictyostelium discoideum LvsC (lvsC)
gene, complete cds.
Length = 2402

Score = 544 bits (1402), Expect = e-153
Identities = 266/267 (99%), Positives = 266/267 (99%)
Frame = +3

Query: 12 LVSKKHHIQRDPLNESHISILKTPPNQLQAYFLKITNKNPIVYVYIPEPNPIMSYLVADK 191
L SKKHHIQRDPLNESHISILKTPPNQLQAYFLKITNKNPIVYVYIPEPNPIMSYLVADK
Sbjct: 2128 LFSKKHHIQRDPLNESHISILKTPPNQLQAYFLKITNKNPIVYVYIPEPNPIMSYLVADK 2187

Query: 192 VTVIDKSRTTTNHKWFPSTPNDKISPFTFELDPSSTTKRRIGLPFANDVTISPNCFAITS 371
VTVIDKSRTTTNHKWFPSTPNDKISPFTFELDPSSTTKRRIGLPFANDVTISPNCFAITS
Sbjct: 2188 VTVIDKSRTTTNHKWFPSTPNDKISPFTFELDPSSTTKRRIGLPFANDVTISPNCFAITS 2247

Query: 372 DGRYVISCAHWDNSFKLSFVDSAKLIQSVVKHKDTVTCLSLASDGQTLITGSKDTTVMVW 551
DGRYVISCAHWDNSFKLSFVDSAKLIQSVVKHKDTVTCLSLASDGQTLITGSKDTTVMVW
Sbjct: 2248 DGRYVISCAHWDNSFKLSFVDSAKLIQSVVKHKDTVTCLSLASDGQTLITGSKDTTVMVW 2307

Query: 552 RIATTNKSGAPKFNDVPDHILYGHDDEITCVDVNVGLDISISGSKDGTCIIHNLKHGEYV 731
RIATTNKSGAPKFNDVPDHILYGHDDEITCVDVNVGLDISISGSKDGTCIIHNLKHGEYV
Sbjct: 2308 RIATTNKSGAPKFNDVPDHILYGHDDEITCVDVNVGLDISISGSKDGTCIIHNLKHGEYV 2367

Query: 732 RSIYLPRQSPISLIAISNQGYIVIYSQ 812
RSIYLPRQSPISLIAISNQGYIVIYSQ
Sbjct: 2368 RSIYLPRQSPISLIAISNQGYIVIYSQ 2394

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,928,017,049
Number of extensions: 39917368
Number of successful extensions: 109427
Number of sequences better than 10.0: 2153
Number of HSP's gapped: 106556
Number of HSP's successfully gapped: 3697
Length of query: 399
Length of database: 1,040,966,779
Length adjustment: 131
Effective length of query: 268
Effective length of database: 621,205,444
Effective search space: 166483058992
Effective search space used: 166483058992
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.49 gvh: 0.34 alm: 0.42 top: 0.53 tms: 0.00 mit: 0.27 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.30 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

56.0 %: cytoplasmic
16.0 %: nuclear
12.0 %: mitochondrial
8.0 %: cytoskeletal
8.0 %: peroxisomal

>> prediction for Contig-U10479-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 1
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0