| Contig-U10457-1 |
| Contig ID |
Contig-U10457-1 |
| Contig update |
2002. 9.13 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
632 |
| Chromosome number (1..6, M) |
3 |
| Chromosome length |
6358359 |
| Start point |
5402358 |
| End point |
5401736 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
1 |
| Number of EST |
1 |
| Link to clone list |
U10457 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.20 |
| Homology vs DNA |
Query= Contig-U10457-1 (Contig-U10457-1Q) /CSM_Contig/Contig-U10457-1Q.Seq.d
(632 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ415278) Dictyostelium discoideum cDNA clone:ddv22f02, 5' ... 1017 0.0 2
(AC172069) Bos taurus clone CH240-281P9, WORKING DRAFT SEQUE... 40 0.096 4
(AC156719) Bos taurus clone CH240-54J12, WORKING DRAFT SEQUE... 48 0.38 1
(AC165682) Bos taurus clone CH240-165P7, WORKING DRAFT SEQUE... 48 0.38 1
(CE290098) tigr-gss-dog-17000333842576 Dog Library Canis lup... 48 0.38 1
(AC110552) Mus musculus chromosome 17, clone RP23-247L7, com... 46 1.5 1
(AC078985) Homo sapiens 3q BAC RP11-82C9 (Roswell Park Cance... 46 1.5 1
(AC156734) Bos taurus clone CH240-40A24, WORKING DRAFT SEQUE... 46 1.5 1
(AC130425) Homo sapiens chromosome 3 clone RP11-33A1, *** SE... 46 1.5 1
(CU407299) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.5 1
(AC007480) Homo sapiens clone RP11-33A1, WORKING DRAFT SEQUE... 46 1.5 1
(AK038392) Mus musculus adult male hypothalamus cDNA, RIKEN ... 46 1.5 1
(EJ928561) 1093018793630 Global-Ocean-Sampling_GS-30-02-01-1... 46 1.5 1
(EJ850208) 1093017877732 Global-Ocean-Sampling_GS-30-02-01-1... 46 1.5 1
(CU088683) Equus caballus GSS, BAC clone CH241-188F11, T7 en... 46 1.5 1
(CT254930) Sus scrofa genomic clone PigE-203E8, genomic surv... 46 1.5 1
(CE836726) tigr-gss-dog-17000332590918 Dog Library Canis lup... 46 1.5 1
(CE645865) tigr-gss-dog-17000367180222 Dog Library Canis lup... 46 1.5 1
(CE013556) tigr-gss-dog-17000321076624 Dog Library Canis lup... 46 1.5 1
(CC258149) CH261-163K7_Sp6.2 CH261 Gallus gallus genomic clo... 46 1.5 1
(EG598626) BRAINF098388L17 POSSUM_01-POSSUM-C-BRAIN-2KB Tric... 46 1.5 1
(CK570804) est_l_vannamei492 g6hCd95t Litopenaeus vannamei c... 46 1.5 1
(BB588688) Mus musculus adult male hypothalamus cDNA, RIKEN ... 46 1.5 1
(FE187216) LV_NC_RA43C24f Litopenaeus vannamei nerve cord cD... 46 1.5 1
(FE182881) LV_NC_RA30M19f Litopenaeus vannamei nerve cord cD... 46 1.5 1
(FE182880) LV_NC_RA30K19r Litopenaeus vannamei nerve cord cD... 46 1.5 1
(FE173594) LV_NC_RA06J12r Litopenaeus vannamei nerve cord cD... 46 1.5 1
(FE173593) LV_NC_RA06H12r Litopenaeus vannamei nerve cord cD... 46 1.5 1
(FE172116) LV_NC_RA02F16r Litopenaeus vannamei nerve cord cD... 46 1.5 1
(FE172115) LV_NC_RA02D16r Litopenaeus vannamei nerve cord cD... 46 1.5 1
(FE170550) LV_LO_RA051F09f Litopenaeus vannamei lymphoid org... 46 1.5 1
(FE170549) LV_LO_RA051D09r Litopenaeus vannamei lymphoid org... 46 1.5 1
(FE169695) LV_LO_RA025J21r Litopenaeus vannamei lymphoid org... 46 1.5 1
(FE155387) LV_LO_RA016K06f Litopenaeus vannamei lymphoid org... 46 1.5 1
(FE152658) LV_LO_RA011K10f Litopenaeus vannamei lymphoid org... 46 1.5 1
(FE152657) LV_LO_RA011I10r Litopenaeus vannamei lymphoid org... 46 1.5 1
(FE151721) LV_LO_RA010K05f Litopenaeus vannamei lymphoid org... 46 1.5 1
(FE151720) LV_LO_RA010I05r Litopenaeus vannamei lymphoid org... 46 1.5 1
(FE141610) LV_HP_RA40G07f Litopenaeus vannamei hepatopancrea... 46 1.5 1
(FE090557) LV_GL_RA40G18r Litopenaeus vannamei gills cDNA li... 46 1.5 1
(FE090556) LV_GL_RA40E18r Litopenaeus vannamei gills cDNA li... 46 1.5 1
(FE087294) LV_GL_RA33E08f Litopenaeus vannamei gills cDNA li... 46 1.5 1
(FE087293) LV_GL_RA33C08r Litopenaeus vannamei gills cDNA li... 46 1.5 1
(FE085735) LV_GL_RA30P09f Litopenaeus vannamei gills cDNA li... 46 1.5 1
(FE085734) LV_GL_RA30N09r Litopenaeus vannamei gills cDNA li... 46 1.5 1
(FE080154) LV_GL_RA17A14r Litopenaeus vannamei gills cDNA li... 46 1.5 1
(FE080153) LV_GL_RA17O12r Litopenaeus vannamei gills cDNA li... 46 1.5 1
(FE075100) LV_GL_RA06K20f Litopenaeus vannamei gills cDNA li... 46 1.5 1
(AL121940) Human DNA sequence *** SEQUENCING CANCELLED *** f... 36 3.5 3
(ER399284) 1095349036855 Global-Ocean-Sampling_GS-34-01-01-1... 32 3.9 2
(AE016877) Bacillus cereus ATCC 14579, complete genome. 44 4.7 18
(AF057019) Dictyostelium discoideum interaptin (abpD) gene, ... 36 4.9 3
(BV287812) S232P6466FD4.T0 Beagle Canis familiaris STS genom... 44 6.0 1
(AP008218) Oryza sativa (japonica cultivar-group) genomic DN... 44 6.0 1
(AP008217) Oryza sativa (japonica cultivar-group) genomic DN... 44 6.0 1
(AM451740) Vitis vinifera contig VV78X013360.6, whole genome... 44 6.0 1
(AL732377) Oryza sativa chromosome 12, . BAC OSJNBa0036E08 o... 44 6.0 1
(AC134044) Oryza sativa Japonica Group chromosome 11 clone O... 44 6.0 1
(EA683141) Sequence 62020 from patent US 7365185. 44 6.0 1
(EA681444) Sequence 60323 from patent US 7365185. 44 6.0 1
(AC136829) Rattus norvegicus clone CH230-338L15, WORKING DRA... 44 6.0 1
(AC214710) Pteropus vampyrus clone CH279-184B12, WORKING DRA... 44 6.0 1
(AC171875) Bos taurus clone CH240-278A3, WORKING DRAFT SEQUE... 44 6.0 1
(ET202588) ZMMBBb0116P23.fq ZMMBB_VAL Zea mays genomic clone... 44 6.0 1
(ER355809) 1092351101166 Global-Ocean-Sampling_GS-34-01-01-1... 44 6.0 1
(AQ331127) nbxb0048D04f CUGI Rice BAC Library Oryza sativa J... 44 6.0 1
(EJ400246) 1093012031738 Global-Ocean-Sampling_GS-28-01-01-1... 44 6.0 1
(EJ267575) 1095351024767 Global-Ocean-Sampling_GS-27-01-01-1... 44 6.0 1
(EJ248558) 1095344003071 Global-Ocean-Sampling_GS-27-01-01-1... 44 6.0 1
(ED660969) GM_WBa0083L13.r GM_WBa Glycine max genomic clone ... 44 6.0 1
(EE009735) ROE00006218 Rhizopus oryzae Company Rhizopus oryz... 44 6.0 1
(EE000980) ROE00004183 Rhizopus oryzae Company Rhizopus oryz... 44 6.0 1
(CB310952) AGENCOURT_11647469 NICHD_Rh_Ov1 Macaca mulatta cD... 44 6.0 1
(BQ743093) saq60a08.y1 Gm-c1076 Glycine max cDNA clone SOYBE... 44 6.0 1
(FK414922) 454GmaGlobSeed149554 Soybean Seeds Containing Glo... 44 6.0 1
(AW310122) sf31d08.x1 Gm-c1028 Glycine max cDNA clone GENOME... 44 6.0 1
(AC114281) Homo sapiens chromosome 5 clone CTD-2306N9, WORKI... 36 7.3 5
(AC220849) Bos taurus clone CH240-344D15, WORKING DRAFT SEQU... 38 7.5 3
(AC159711) Mus musculus 10 BAC RP23-214N15 (Roswell Park Can... 40 8.4 2
(CP000728) Clostridium botulinum F str. Langeland, complete ... 32 8.4 2
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet... 32 8.4 2
(CP000939) Clostridium botulinum B1 str. Okra, complete genome. 32 8.4 2
(AM412317) Clostridium botulinum A str. ATCC 3502 complete g... 32 8.5 2
(CP000726) Clostridium botulinum A str. ATCC 19397, complete... 32 8.5 2
(CP000727) Clostridium botulinum A str. Hall, complete genome. 32 8.5 2
>(BJ415278) Dictyostelium discoideum cDNA clone:ddv22f02, 5' end,
single read.
Length = 623
Score = 1017 bits (513), Expect(2) = 0.0
Identities = 513/513 (100%)
Strand = Plus / Plus
Query: 111 ggcatcagtatatacaaccaaaagaggtaaaaccaagaaagctaaattaggtattcgtaa 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 ggcatcagtatatacaaccaaaagaggtaaaaccaagaaagctaaattaggtattcgtaa 170
Query: 171 agattcaaataataatgcagcaaataaattgaattgtaaaatttccaatccaggaaagaa 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 agattcaaataataatgcagcaaataaattgaattgtaaaatttccaatccaggaaagaa 230
Query: 231 accacaagcagaagcaccaactcttttcaaatctcaacaagagttattattaagacaaag 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 accacaagcagaagcaccaactcttttcaaatctcaacaagagttattattaagacaaag 290
Query: 291 aggtgagagttcagacccaactttggcattaacagcaaaatgcagtaattcaaaatgtaa 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 aggtgagagttcagacccaactttggcattaacagcaaaatgcagtaattcaaaatgtaa 350
Query: 351 accagataaaacagcaagtgaaccaccaaaactctcattatgttcagcttgtaattctgt 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 accagataaaacagcaagtgaaccaccaaaactctcattatgttcagcttgtaattctgt 410
Query: 411 atcctattgtcgtagagaatgtcaagttgaacattggccagctcataaaactaaatgttt 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 atcctattgtcgtagagaatgtcaagttgaacattggccagctcataaaactaaatgttt 470
Query: 471 acaaattagacaatcaattgaagatgatgcaaagaaatctttaaatttattatctgctcg 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 acaaattagacaatcaattgaagatgatgcaaagaaatctttaaatttattatctgctcg 530
Query: 531 tattaaatggaattattaaaaactcagagaatcaaattcattaacaccatttgatgcaac 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 tattaaatggaattattaaaaactcagagaatcaaattcattaacaccatttgatgcaac 590
Query: 591 atctatggttgtaggtgaaaatccatatgcaac 623
|||||||||||||||||||||||||||||||||
Sbjct: 591 atctatggttgtaggtgaaaatccatatgcaac 623
Score = 79.8 bits (40), Expect(2) = 0.0
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 1 aatatttattttaactcacaaaacagatctgtcttatacg 40
||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatatttattttaactcacaaaacagatctgtcttatacg 40
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 731,840,039
Number of extensions: 44147293
Number of successful extensions: 3460303
Number of sequences better than 10.0: 86
Length of query: 632
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 609
Effective length of database: 93,106,754,628
Effective search space: 56702013568452
Effective search space used: 56702013568452
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.27 |
| Homology vs Protein |
Query= Contig-U10457-1 (Contig-U10457-1Q) /CSM_Contig/Contig-U10457-1Q.Seq.d
(632 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL953864_3(AL953864|pid:none) Zebrafish DNA sequence from clone ... 53 6e-06
BC125668_1(BC125668|pid:none) Xenopus tropicalis hypothetical pr... 49 1e-04
CP001329_408(CP001329|pid:none) Micromonas sp. RCC299 chromosome... 49 2e-04
CP001575_554(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 48 2e-04
EU670451_1(EU670451|pid:none) Drosophila simulans strain Florida... 47 6e-04
EU670510_1(EU670510|pid:none) Drosophila sechellia strain ss77 C... 47 6e-04
BC054130_1(BC054130|pid:none) Danio rerio zgc:63660, mRNA (cDNA ... 47 6e-04
AY814101_1(AY814101|pid:none) Schistosoma japonicum SJCHGC05428 ... 46 8e-04
BC089198_1(BC089198|pid:none) Xenopus laevis zinc finger, MYND d... 46 8e-04
(Q3UJD6) RecName: Full=Ubiquitin carboxyl-terminal hydrolase 19;... 46 0.001
(Q6J1Y9) RecName: Full=Ubiquitin carboxyl-terminal hydrolase 19;... 46 0.001
AK160807_1(AK160807|pid:none) Mus musculus 17 days embryo head c... 46 0.001
CP001332_377(CP001332|pid:none) Micromonas sp. RCC299 chromosome... 46 0.001
BC046824_1(BC046824|pid:none) Mus musculus ubiquitin specific pe... 46 0.001
BC060613_1(BC060613|pid:none) Mus musculus ubiquitin specific pe... 46 0.001
AE014134_3683(AE014134|pid:none) Drosophila melanogaster chromos... 45 0.001
BC082241_1(BC082241|pid:none) Homo sapiens ubiquitin specific pe... 45 0.002
AK294756_1(AK294756|pid:none) Homo sapiens cDNA FLJ54450 complet... 45 0.002
AB020698_1(AB020698|pid:none) Homo sapiens mRNA for KIAA0891 pro... 45 0.002
(O94966) RecName: Full=Ubiquitin carboxyl-terminal hydrolase 19;... 45 0.002
BC065909_1(BC065909|pid:none) Homo sapiens ubiquitin specific pe... 45 0.002
BC142727_1(BC142727|pid:none) Homo sapiens ubiquitin specific pe... 45 0.002
CU633873_66(CU633873|pid:none) Podospora anserina genomic DNA ch... 45 0.002
(Q9FPS9) RecName: Full=Ubiquitin carboxyl-terminal hydrolase 15;... 45 0.002
AF302665_1(AF302665|pid:none) Arabidopsis thaliana ubiquitin-spe... 44 0.005
AE014296_2373(AE014296|pid:none) Drosophila melanogaster chromos... 43 0.007
(Q0VCS9) RecName: Full=Ankyrin repeat and MYND domain-containing... 43 0.008
CR380957_138(CR380957|pid:none) Candida glabrata strain CBS138 c... 43 0.008
CR382136_83(CR382136|pid:none) Debaryomyces hansenii strain CBS7... 43 0.008
FJ710566_2(FJ710566|pid:none) Ceratitis capitata clone Ccap_docf... 42 0.011
FJ907929_1(FJ907929|pid:none) Drosophila silvestris clone sv3E-F... 42 0.011
AC159412_23(AC159412|pid:none) Trypanosoma brucei chromosome 7 c... 42 0.011
AE014296_1962(AE014296|pid:none) Drosophila melanogaster chromos... 42 0.014
BC109255_1(BC109255|pid:none) Homo sapiens zinc finger, MYND-typ... 42 0.014
(Q4VC12) RecName: Full=Zinc finger MYND domain-containing protei... 42 0.014
BC097455_1(BC097455|pid:none) Rattus norvegicus SET and MYND dom... 42 0.014
(Q99ML0) RecName: Full=Zinc finger MYND domain-containing protei... 42 0.014
AK132332_1(AK132332|pid:none) Mus musculus 15 days embryo head c... 42 0.014
BC094693_1(BC094693|pid:none) Homo sapiens zinc finger, MYND-typ... 42 0.014
BC079255_1(BC079255|pid:none) Rattus norvegicus zinc finger, MYN... 42 0.014
EU955644_1(EU955644|pid:none) Zea mays clone 1540519 MYND finger... 42 0.019
EU967847_1(EU967847|pid:none) Zea mays clone 306534 MYND finger ... 42 0.019
AE013599_131(AE013599|pid:none) Drosophila melanogaster chromoso... 41 0.025
CP000496_800(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 41 0.025
(Q3TPE9) RecName: Full=Ankyrin repeat and MYND domain-containing... 41 0.025
CP001576_237(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 41 0.025
AK077556_1(AK077556|pid:none) Mus musculus 8 days embryo whole b... 41 0.025
AK037644_1(AK037644|pid:none) Mus musculus 16 days neonate thymu... 41 0.025
AP005066_9(AP005066|pid:none) Oryza sativa Japonica Group genomi... 41 0.032
BC098305_1(BC098305|pid:none) Homo sapiens SET and MYND domain c... 41 0.032
(Q9H7B4) RecName: Full=SET and MYND domain-containing protein 3;... 41 0.032
EU661943_1(EU661943|pid:none) Sus scrofa SET and MYND domain-con... 41 0.032
BC031010_1(BC031010|pid:none) Homo sapiens SET and MYND domain c... 41 0.032
AM435533_1(AM435533|pid:none) Vitis vinifera contig VV78X163414.... 41 0.032
BC049367_1(BC049367|pid:none) Homo sapiens SET and MYND domain c... 41 0.032
AM494968_187(AM494968|pid:none) Leishmania braziliensis chromoso... 41 0.032
AB057595_1(AB057595|pid:none) Homo sapiens SMYD3 mRNA for histon... 41 0.032
AM474579_3(AM474579|pid:none) Vitis vinifera contig VV78X054901.... 41 0.032
(Q9NRG4) RecName: Full=SET and MYND domain-containing protein 2;... 41 0.032
AL356583_1(AL356583|pid:none) Human DNA sequence from clone RP11... 41 0.032
T25093(T25093) hypothetical protein T22A3.4 - Caenorhabditis ele... 40 0.042
BT076479_1(BT076479|pid:none) Caligus rogercresseyi clone crog-e... 40 0.042
BC120364_1(BC120364|pid:none) Bos taurus SET and MYND domain con... 40 0.042
CR858459_1(CR858459|pid:none) Pongo abelii mRNA; cDNA DKFZp468J0... 40 0.042
AK163057_1(AK163057|pid:none) Mus musculus 0 day neonate thymus ... 40 0.055
AL833828_1(AL833828|pid:none) Homo sapiens mRNA; cDNA DKFZp566B1... 40 0.055
DQ214189_1(DQ214189|pid:none) Taeniopygia guttata clone 0058P001... 40 0.055
(O75800) RecName: Full=Zinc finger MYND domain-containing protei... 40 0.055
AK150857_1(AK150857|pid:none) Mus musculus bone marrow macrophag... 40 0.055
(Q7M6Z3) RecName: Full=SET and MYND domain-containing protein 2; 40 0.055
CP001575_408(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 40 0.055
U70824_1(U70824|pid:none) Human BLu protein (BLu) mRNA, complete... 40 0.055
BC061485_1(BC061485|pid:none) Mus musculus SET and MYND domain c... 40 0.055
BC109412_1(BC109412|pid:none) Danio rerio SET and MYND domain co... 40 0.055
DQ851821_1(DQ851821|pid:none) Danio rerio SET and MYND domain co... 40 0.072
AM494942_78(AM494942|pid:none) Leishmania braziliensis chromosom... 40 0.072
AM502223_81(AM502223|pid:none) Leishmania infantum chromosome 5. 40 0.072
AC024792_3(AC024792|pid:none) Caenorhabditis elegans cosmid Y48G... 40 0.072
AE014297_195(AE014297|pid:none) Drosophila melanogaster chromoso... 40 0.072
DQ491002_268(DQ491002|pid:none) Paramecium bursaria Chlorella vi... 40 0.072
AC116977_58(AC116977|pid:none) Dictyostelium discoideum chromoso... 40 0.072
(Q5ZMD2) RecName: Full=Ankyrin repeat and MYND domain-containing... 39 0.094
AC087327_17(AC087327|pid:none) Trypanosoma brucei chromosome 4 c... 39 0.12
AK001389_1(AK001389|pid:none) Homo sapiens cDNA FLJ10527 fis, cl... 39 0.12
AJ409151_1(AJ409151|pid:none) Mus musculus mRNA for melanin conc... 39 0.12
(Q8IV38) RecName: Full=Ankyrin repeat and MYND domain-containing... 39 0.12
(Q03162) RecName: Full=MYND-type zinc finger protein MUB1; AltNa... 39 0.12
AC003952_9(AC003952|pid:none) Arabidopsis thaliana chromosome II... 39 0.12
(Q7TSV3) RecName: Full=Zinc finger MYND domain-containing protei... 39 0.12
(Q7XJS0) RecName: Full=Histone-lysine N-methyltransferase ASHR1;... 39 0.12
BC120241_1(BC120241|pid:none) Bos taurus SET and MYND domain con... 39 0.12
BX276102_4(BX276102|pid:none) Zebrafish DNA sequence from clone ... 39 0.16
U76374_1(U76374|pid:none) Mus musculus skm-BOP2 (Bop) mRNA, comp... 39 0.16
BC133278_1(BC133278|pid:none) Bos taurus SET and MYND domain con... 39 0.16
U76371_1(U76371|pid:none) Mus musculus t-BOP (Bop) mRNA, complet... 39 0.16
AB012248_17(AB012248|pid:none) Arabidopsis thaliana genomic DNA,... 39 0.16
DQ491003_244(DQ491003|pid:none) Paramecium bursaria Chlorella vi... 39 0.16
AK142153_1(AK142153|pid:none) Mus musculus 13 days embryo heart ... 39 0.16
BC124055_1(BC124055|pid:none) Xenopus tropicalis zinc finger, MY... 39 0.16
BC045296_1(BC045296|pid:none) Danio rerio zinc finger, MYND doma... 39 0.16
BC044410_1(BC044410|pid:none) Danio rerio zgc:55491, mRNA (cDNA ... 39 0.16
AY113356_1(AY113356|pid:none) Drosophila melanogaster GM13546 fu... 38 0.21
AE014296_3279(AE014296|pid:none) Drosophila melanogaster chromos... 38 0.21
(Q9FYF9) RecName: Full=F-box protein At1g67340; &AC002130_16(AC... 38 0.21
EU661947_1(EU661947|pid:none) Sus scrofa SET and MYND domain-con... 38 0.21
FN357312_35(FN357312|pid:none) Schistosoma mansoni genome sequen... 38 0.21
AY518933_1(AY518933|pid:none) Homo sapiens hypothetical rhabdomy... 38 0.21
EU661942_1(EU661942|pid:none) Sus scrofa SET and MYND domain-con... 38 0.21
DQ851823_1(DQ851823|pid:none) Danio rerio SET and MYND domain co... 38 0.21
(Q8NB12) RecName: Full=SET and MYND domain-containing protein 1;... 38 0.21
CT005268_167(CT005268|pid:none) Leishmania major strain Friedlin... 38 0.21
BC091465_1(BC091465|pid:none) Danio rerio SET and MYND domain co... 38 0.21
BT055405_1(BT055405|pid:none) Zea mays full-length cDNA clone ZM... 38 0.21
AK029806_1(AK029806|pid:none) Mus musculus adult male testis cDN... 38 0.27
BX855610_3(BX855610|pid:none) Zebrafish DNA sequence from clone ... 38 0.27
AL732590_9(AL732590|pid:none) Mouse DNA sequence from clone RP23... 38 0.27
BC127325_1(BC127325|pid:none) Xenopus tropicalis hypothetical pr... 38 0.27
AE013599_4053(AE013599|pid:none) Drosophila melanogaster chromos... 38 0.27
AF302666_1(AF302666|pid:none) Arabidopsis thaliana ubiquitin-spe... 38 0.27
CR382131_172(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 38 0.27
AC091775_17(AC091775|pid:none) Oryza sativa chromosome 3 BAC OSJ... 38 0.27
AP007169_399(AP007169|pid:none) Aspergillus oryzae RIB40 genomic... 38 0.27
BT034813_1(BT034813|pid:none) Zea mays full-length cDNA clone ZM... 38 0.27
DQ851822_1(DQ851822|pid:none) Danio rerio SET and MYND domain co... 38 0.27
BT044442_1(BT044442|pid:none) Drosophila melanogaster FI09725 fu... 38 0.27
BC065698_1(BC065698|pid:none) Mus musculus gene model 996, (NCBI... 38 0.27
AF466646_5(AF466646|pid:none) Zea mays putative transposase (Z19... 38 0.27
AP006843_19(AP006843|pid:none) Oryza sativa Japonica Group genom... 37 0.36
CR382122_531(CR382122|pid:none) Kluyveromyces lactis strain NRRL... 37 0.36
AP003707_11(AP003707|pid:none) Oryza sativa Japonica Group genom... 37 0.36
AM431252_1(AM431252|pid:none) Vitis vinifera contig VV78X234702.... 37 0.36
DQ082999_1(DQ082999|pid:none) Homo sapiens transcriptional repre... 37 0.47
CR954213_72(CR954213|pid:none) Ostreococcus tauri strain OTTH059... 37 0.47
(Q9H1F4) RecName: Full=Protein kinase C-binding protein 1; AltNa... 37 0.47
AK122966_1(AK122966|pid:none) Homo sapiens cDNA FLJ16698 fis, cl... 37 0.47
DQ323979_1(DQ323979|pid:none) Danio rerio histone methyltransfer... 37 0.47
DQ368670_1(DQ368670|pid:none) Homo sapiens RACK7 isoform b mRNA,... 37 0.47
AB032951_1(AB032951|pid:none) Homo sapiens mRNA for KIAA1125 pro... 37 0.47
AF273045_1(AF273045|pid:none) Homo sapiens CTCL tumor antigen se... 37 0.47
AF410782_1(AF410782|pid:none) Gallus gallus cardiac and skeletal... 37 0.47
DQ368679_1(DQ368679|pid:none) Homo sapiens RACK7 isoform k mRNA,... 37 0.47
CR861442_1(CR861442|pid:none) Pongo abelii mRNA; cDNA DKFZp459F1... 37 0.47
BX641005_1(BX641005|pid:none) Homo sapiens mRNA; cDNA DKFZp686L0... 37 0.47
BC163095_1(BC163095|pid:none) Danio rerio SET and MYND domain co... 37 0.47
DQ368669_1(DQ368669|pid:none) Homo sapiens RACK7 isoform a mRNA,... 37 0.47
AL031666_1(AL031666|pid:none) Human DNA sequence from clone RP4-... 37 0.47
DQ082998_1(DQ082998|pid:none) Homo sapiens transcriptional repre... 37 0.47
AF410781_1(AF410781|pid:none) Gallus gallus cardiac and skeletal... 37 0.47
AF233453_1(AF233453|pid:none) Homo sapiens RACK-like protein PRK... 37 0.47
AC144430_16(AC144430|pid:none) Medicago truncatula clone mth2-16... 37 0.61
CR940347_900(CR940347|pid:none) Theileria annulata strain Ankara... 37 0.61
AY035129_1(AY035129|pid:none) Arabidopsis thaliana putative zinc... 37 0.61
CU633899_444(CU633899|pid:none) Podospora anserina genomic DNA c... 37 0.61
BT038583_1(BT038583|pid:none) Zea mays full-length cDNA clone ZM... 37 0.61
DQ214352_1(DQ214352|pid:none) Taeniopygia guttata clone 0064P000... 37 0.61
BT041636_1(BT041636|pid:none) Zea mays full-length cDNA clone ZM... 37 0.61
AK024733_1(AK024733|pid:none) Homo sapiens cDNA: FLJ21080 fis, c... 37 0.61
AF001308_24(AF001308|pid:none) Arabidopsis thaliana BAC T10M13 f... 37 0.61
S43602(S43602)apoptosis protein RP-8 homolog R07E5.10 - Caenorha... 36 0.80
AM442522_5(AM442522|pid:none) Vitis vinifera contig VV78X189854.... 36 0.80
CP001330_578(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 36 0.80
CR382398_70(CR382398|pid:none) Plasmodium falciparum chromosome ... 36 0.80
AB074010_1(AB074010|pid:none) Rattus norvegicus Spikar mRNA for ... 36 0.80
FN318769_1(FN318769|pid:none) Schistosoma japonicum isolate Anhu... 36 1.0
AY813005_1(AY813005|pid:none) Schistosoma japonicum SJCHGC05027 ... 36 1.0
EU965432_1(EU965432|pid:none) Zea mays clone 285991 histone-lysi... 36 1.0
AK221682_1(AK221682|pid:none) Arabidopsis thaliana mRNA for puta... 36 1.0
AP003917_17(AP003917|pid:none) Oryza sativa Japonica Group genom... 36 1.0
AY061106_1(AY061106|pid:none) Drosophila melanogaster LD09503 fu... 36 1.0
(Q9SJA1) RecName: Full=Ubiquitin carboxyl-terminal hydrolase 19;... 36 1.0
T20528(T20528) hypothetical protein F07A11.4 - Caenorhabditis el... 36 1.0
AP005755_22(AP005755|pid:none) Oryza sativa Japonica Group genom... 35 1.4
BX842625_16(BX842625|pid:none) Neurospora crassa DNA linkage gro... 35 1.4
EU007818_1(EU007818|pid:none) Perkinsus olseni HIF prolyl hydrox... 35 1.4
CP000593_67(CP000593|pid:none) Ostreococcus lucimarinus CCE9901 ... 35 1.4
U21717_1(U21717|pid:none) Drosophila melanogaster nervy (nvy) mR... 35 1.8
BC041797_1(BC041797|pid:none) Mus musculus protein kinase C bind... 35 1.8
BC125752_1(BC125752|pid:none) Xenopus tropicalis protein kinase ... 35 1.8
AM269981_30(AM269981|pid:none) Aspergillus niger contig An01c034... 35 1.8
AY223048_1(AY223048|pid:none) Schistosoma japonicum SJCHGC05714 ... 35 1.8
BC048186_1(BC048186|pid:none) Mus musculus protein kinase C bind... 35 1.8
AL589902_5(AL589902|pid:none) Mouse DNA sequence from clone RP23... 35 1.8
AE013599_4077(AE013599|pid:none) Drosophila melanogaster chromos... 35 1.8
AL589902_2(AL589902|pid:none) Mouse DNA sequence from clone RP23... 35 1.8
BT078993_1(BT078993|pid:none) Esox lucius clone eluc-evq-530-114... 35 1.8
AL589902_6(AL589902|pid:none) Mouse DNA sequence from clone RP23... 35 1.8
AB093284_1(AB093284|pid:none) Mus musculus mRNA for mKIAA1125 pr... 35 1.8
AK155864_1(AK155864|pid:none) Mus musculus B6-derived CD11 +ve d... 35 1.8
AY714075_1(AY714075|pid:none) Gallus gallus MTG16b mRNA, complet... 35 2.3
(Q24180) RecName: Full=Deformed epidermal autoregulatory factor ... 35 2.3
AM502224_30(AM502224|pid:none) Leishmania infantum chromosome 6. 35 2.3
AP008207_1663(AP008207|pid:none) Oryza sativa (japonica cultivar... 35 2.3
(Q5F3B1) RecName: Full=Protein CBFA2T3; &AJ851739_1(AJ851739|pi... 35 2.3
AE014296_3420(AE014296|pid:none) Drosophila melanogaster chromos... 35 2.3
AP002908_10(AP002908|pid:none) Oryza sativa Japonica Group genom... 35 2.3
AY714079_1(AY714079|pid:none) Xenopus laevis MTG16b (MTG16) mRNA... 35 2.3
CT005245_30(CT005245|pid:none) Leishmania major strain Friedlin,... 34 3.0
AY795850_1(AY795850|pid:none) Thuja occidentalis thaumatin-like ... 34 3.0
AK023704_1(AK023704|pid:none) Homo sapiens cDNA FLJ13642 fis, cl... 34 3.0
AY714078_1(AY714078|pid:none) Xenopus laevis MTG16b (MTG16) mRNA... 34 3.0
AM910993_477(AM910993|pid:none) Plasmodium knowlesi strain H chr... 34 3.9
AM910993_422(AM910993|pid:none) Plasmodium knowlesi strain H chr... 34 3.9
CT005266_264(CT005266|pid:none) Leishmania major strain Friedlin... 34 3.9
BT024519_1(BT024519|pid:none) Arabidopsis thaliana At1g53030 mRN... 34 3.9
BT025832_1(BT025832|pid:none) Drosophila melanogaster IP09238 fu... 34 3.9
(A9CPT4) RecName: Full=Tudor domain-containing protein 1; &AB30... 34 3.9
AM494943_28(AM494943|pid:none) Leishmania braziliensis chromosom... 34 3.9
BT014862_1(BT014862|pid:none) Arabidopsis thaliana At1g72240 gen... 33 5.2
(O54972) RecName: Full=Protein CBFA2T3; AltName: Full=Protein ET... 33 5.2
BT002772_1(BT002772|pid:none) Arabidopsis thaliana clone RAFL15-... 33 5.2
A57784(A57784) AML1/MTG8 mutant fusion protein - human &D13979_... 33 5.2
AY889748_1(AY889748|pid:none) Synthetic construct Homo sapiens c... 33 5.2
AF038029_1(AF038029|pid:none) Mus musculus ETO/MTG8-related prot... 33 5.2
(Q61909) RecName: Full=Protein CBFA2T1; AltName: Full=Protein MT... 33 5.2
AK032132_1(AK032132|pid:none) Mus musculus adult male medulla ob... 33 5.2
AL807804_1(AL807804|pid:none) Mouse DNA sequence from clone RP23... 33 5.2
CU640366_228(CU640366|pid:none) Podospora anserina genomic DNA c... 33 5.2
AY892208_1(AY892208|pid:none) Synthetic construct Homo sapiens c... 33 5.2
BT048617_1(BT048617|pid:none) Salmo salar clone ssal-rgb2-567-29... 33 5.2
EU035495_1(EU035495|pid:none) Ustilago maydis Fuz1 gene, complet... 33 5.2
AK312592_1(AK312592|pid:none) Homo sapiens cDNA, FLJ92968, highl... 33 5.2
U22303_1(U22303|pid:none) Hepatitis GB virus A polyprotein, comp... 33 5.2
X79990_1(X79990|pid:none) H.sapiens ETO mRNA. 33 5.2
AF263839_1(AF263839|pid:none) Gallus gallus MTG8/ETOb mRNA, comp... 33 6.7
AY714073_1(AY714073|pid:none) Gallus gallus MTG8 mRNA, complete ... 33 6.7
AM920437_2017(AM920437|pid:none) Penicillium chrysogenum Wiscons... 33 6.7
AL021475_3(AL021475|pid:none) Caenorhabditis elegans YAC Y32F6B,... 33 6.7
AJ000996_1(AJ000996|pid:none) Aspergillus nidulans samB gene. 33 6.7
BC035010_1(BC035010|pid:none) Homo sapiens tudor domain containi... 33 6.7
AY353706_1(AY353706|pid:none) Cupressus sempervirens PR5 allerge... 33 6.7
BT036372_1(BT036372|pid:none) Zea mays full-length cDNA clone ZM... 33 6.7
EU960386_1(EU960386|pid:none) Zea mays clone 224402 unknown mRNA. 33 6.7
CR382139_477(CR382139|pid:none) Debaryomyces hansenii strain CBS... 33 6.7
AB013286_1(AB013286|pid:none) Homo sapiens gene for MTG16, compl... 33 6.7
AK122916_1(AK122916|pid:none) Homo sapiens cDNA FLJ16594 fis, cl... 33 6.7
AK314766_1(AK314766|pid:none) Homo sapiens cDNA, FLJ95635, highl... 33 6.7
AF178536_1(AF178536|pid:none) Caenorhabditis elegans EGL-9 (egl-... 33 6.7
(P81295) RecName: Full=Pathogenesis-related protein; AltName: Fu... 33 6.7
AY353705_1(AY353705|pid:none) Cupressus sempervirens PR5 allerge... 33 6.7
CP000595_202(CP000595|pid:none) Ostreococcus lucimarinus CCE9901... 33 6.7
BC063133_1(BC063133|pid:none) Homo sapiens tudor domain containi... 33 6.7
AE014297_4967(AE014297|pid:none) Drosophila melanogaster chromos... 33 8.8
AY353704_1(AY353704|pid:none) Juniperus rigida PR5 allergen Jun ... 33 8.8
EU953539_1(EU953539|pid:none) Zea mays clone 1432147 unknown mRNA. 33 8.8
AE014297_4966(AE014297|pid:none) Drosophila melanogaster chromos... 33 8.8
(Q67XW5) RecName: Full=Ubiquitin carboxyl-terminal hydrolase 18;... 33 8.8
AF052217_1(AF052217|pid:none) Homo sapiens MTG8-related protein ... 33 8.8
AF198490_1(AF198490|pid:none) Homo sapiens 8q22.1 region and MTG... 33 8.8
CP000593_38(CP000593|pid:none) Ostreococcus lucimarinus CCE9901 ... 33 8.8
AM450043_2(AM450043|pid:none) Vitis vinifera contig VV78X048340.... 33 8.8
DQ851820_1(DQ851820|pid:none) Danio rerio SET and MYND domain co... 33 8.8
AM502248_58(AM502248|pid:none) Leishmania infantum chromosome 30. 33 8.8
AY353703_1(AY353703|pid:none) Juniperus rigida PR5 allergen Jun ... 33 8.8
>AL953864_3(AL953864|pid:none) Zebrafish DNA sequence from clone
DKEY-32E6 in linkage group 23 Contains the gene for a
novel protein similar to vertebrate ubiquitin specific
peptidase 19 (USP19), the gene for a novel protein
similar to vertebrate extracellular matrix protein 2,
female organ and adipocyte specific (ECM2), the 5' end of
the gene for a novel protein similar to biglycan-like
protein 3 (bgl3, zgc:77123), the tkt gene for
transketolase, the 3' end of a gene for a novel protein
similar to the vertebrate laminin beta family, the gene
for a novel protein similar to vertebrate troponin C
(zgc:86932, TNNC), the gene for a novel protein similar
to vertebrate leucine rich repeat containing 23 (LRRC23,
zgc:101782), the gene for a novel protein similar to
vertebrate laminin, beta 2 (laminin S) (LAMB2), a novel
gene and three CpG islands, complete sequence.
Length = 1478
Score = 53.1 bits (126), Expect = 6e-06
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = +1
Query: 265 QQELLLRQRGESSDPTLALTAKCSNSKCKPDKTASEPPKLSLCSACNSVSYCRRECQVEH 444
++ +LL+ + P++ +T KC+ P AS+ KL C+ C V YC + CQ H
Sbjct: 904 ERVVLLKVQQRPQIPSIPIT-KCAGCLKPP---ASDDEKLKRCTRCYRVGYCNQTCQKNH 959
Query: 445 WPAHKTKCLQIRQSIED 495
WP+HKT C R ++E+
Sbjct: 960 WPSHKTMC---RSNVEN 973
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 847,415,974
Number of extensions: 14904148
Number of successful extensions: 40145
Number of sequences better than 10.0: 253
Number of HSP's gapped: 40110
Number of HSP's successfully gapped: 253
Length of query: 210
Length of database: 1,040,966,779
Length adjustment: 123
Effective length of query: 87
Effective length of database: 646,839,724
Effective search space: 56275055988
Effective search space used: 56275055988
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
1 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |