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Dicty_cDB
Contig List | Clone List | cDNA Library List
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U01674-1
Contig ID Contig-U01674-1
Contig update 2001. 8.29
Contig sequence 
>Contig-U01674-1 (Contig-U01674-1Q) /CSM_Contig/Contig-U01674-1Q.Seq.d
AAAGAAATCATATAAAAAATGGTTGCAATTTTCAACTTTCAAAGTTTATT
AGTTGTAATATTATTATTTATTTGCACATGCACATATATTAGAGGGTCCT
ATCCATCACTTTTAGAAGTTAGAGATAAACATAGTTTTAGTGGTTTACCG
AGAAAAGCTGCAATTATAGGTGAAAGATTATCTCCATGGGTTTCAGCATG
TTGTCTTATTATGGGTTTATGGACATTATATAATTAAAATCAAAAAAAAA
AAAAAAAACAATTTTCAAATCATAGGTGAAATAATAAATAAATAAATTCA
TGTACATATAGATATAATAATAATAATAATAATAATAATAATAAAAAAAA
AGGA----------TAATTTTTTTTTTTAAAAAAAGGGGAAAAAAAAAAA
AAAAAAACCCCTTCCAATTGCTCAATTTTTTAATTAAATTAATTAAAATT
TGTTAAGGGGAAATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gap gap included
Contig length 533
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 2769171
End point 2769690
Strand (PLUS/MINUS) PLUS
Number of clones 4
Number of EST 5
Link to clone list U01674
List of clone(s) 

est1=SSE330F,1,339
est2=SSM223E,1,353
est3=SSE683E,2,355
est4=SSL538E,15,353
est5=SSE330Z,356,535
Translated Amino Acid sequence 
keii*kmvaifnfqsllvvillfictctyirgsypsllevrdkhsfsglprkaaiigerl
spwvsacclimglwtlyn*nqkkkkkqfsnhr*nnk*INSCTYRYNNNNNNNNNKKKG--
-

---IFFFKKRGKKKKKNPFQLLNFLIKLIKIC*gei*kkkkkkkkkkkkkkkkkkkkkkk
kk
Translated Amino Acid sequence (All Frames) 
Frame A:
keii*kmvaifnfqsllvvillfictctyirgsypsllevrdkhsfsglprkaaiigerl
spwvsacclimglwtlyn*nqkkkkkqfsnhr*nnk*INSCTYRYNNNNNNNNNKKKG--
-

---*ffflkkgekkkkktpsncsif*ln*lkfvkgkfkkkkkkkkkkkkkkkkkkkkkkk
kk

Frame B:
kksykkwlqfstfkvy*l*yyylfahahilegpihhf*kleinivlvvyreklql*vkdy
lhgfqhvvllwvyghyiikikkkkknnfqiigeiink*ihvhidiiiiiiiiiikkk---

---nfff*kkgkkkkkkplpiaqffn*in*nllrgnlkkkkkkkkkkkkkkkkkkkkkkk
kk

Frame C:
rnhikngcnfqlskfiscniiiylhmhiy*rvlsitfrs*r*t*f*wftekscnyr*kii
smgfsmlsyygfmdii*lkskkkkktifks*vk**inkfmyi*i**********kkr---

---IFFFKKRGKKKKKNPFQLLNFLIKLIKIC*gei*kkkkkkkkkkkkkkkkkkkkkkk
kk
own update 2004. 6. 7
Homology vs CSM-cDNA 
Query= Contig-U01674-1 (Contig-U01674-1Q)
/CSM_Contig/Contig-U01674-1Q.Seq.d
         (543 letters)

Database: CSM
           8361 sequences; 7,895,291 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U01674-1 (Contig-U01674-1Q) /CSM_Contig/Conti...   478  e-135
Contig-U02438-1 (Contig-U02438-1Q) /CSM_Contig/Conti...    44  2e-04
Contig-U12347-1 (Contig-U12347-1Q) /CSM_Contig/Conti...    42  9e-04
Contig-U02523-1 (Contig-U02523-1Q) /CSM_Contig/Conti...    42  9e-04
Contig-U14065-1 (Contig-U14065-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U13918-1 (Contig-U13918-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U13716-1 (Contig-U13716-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U13531-1 (Contig-U13531-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U12131-1 (Contig-U12131-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U11820-1 (Contig-U11820-1Q) /CSM_Contig/Conti...    40  0.003

>Contig-U01674-1 (Contig-U01674-1Q) /CSM_Contig/Contig-U01674-1Q.Seq.d
          Length = 543

 Score =  478 bits (241), Expect = e-135
 Identities = 241/241 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaagaaatcatataaaaaatggttgcaattttcaactttcaaagtttattagttgtaata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aaagaaatcatataaaaaatggttgcaattttcaactttcaaagtttattagttgtaata 60

                                                                       
Query: 61  ttattatttatttgcacatgcacatatattagagggtcctatccatcacttttagaagtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttattatttatttgcacatgcacatatattagagggtcctatccatcacttttagaagtt 120

                                                                       
Query: 121 agagataaacatagttttagtggtttaccgagaaaagctgcaattataggtgaaagatta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agagataaacatagttttagtggtttaccgagaaaagctgcaattataggtgaaagatta 180

                                                                       
Query: 181 tctccatgggtttcagcatgttgtcttattatgggtttatggacattatataattaaaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctccatgggtttcagcatgttgtcttattatgggtttatggacattatataattaaaat 240

            
Query: 241 c 241
           |
Sbjct: 241 c 241


 Score =  117 bits (59), Expect = 2e-26
 Identities = 59/59 (100%)
 Strand = Plus / Plus

                                                                      
Query: 408 ccccttccaattgctcaattttttaattaaattaattaaaatttgttaaggggaaattt 466
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ccccttccaattgctcaattttttaattaaattaattaaaatttgttaaggggaaattt 466


 Score =  105 bits (53), Expect = 7e-23
 Identities = 53/53 (100%)
 Strand = Plus / Plus

                                                                
Query: 259 caattttcaaatcataggtgaaataataaataaataaattcatgtacatatag 311
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 caattttcaaatcataggtgaaataataaataaataaattcatgtacatatag 311


>Contig-U02438-1 (Contig-U02438-1Q) /CSM_Contig/Contig-U02438-1Q.Seq.d
          Length = 1182

 Score = 44.1 bits (22), Expect = 2e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 429 tttaattaaattaattaaaatt 450
           ||||||||||||||||||||||
Sbjct: 657 tttaattaaattaattaaaatt 636


>Contig-U12347-1 (Contig-U12347-1Q) /CSM_Contig/Contig-U12347-1Q.Seq.d
          Length = 1453

 Score = 42.1 bits (21), Expect = 9e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 282 taataaataaataaattcatgtacatata 310
           ||||||| ||||||| |||||||||||||
Sbjct: 23  taataaaaaaataaactcatgtacatata 51


  Database: CSM
    Posted date:  Jun 7, 2004  8:33 AM
  Number of letters in database: 7,895,291
  Number of sequences in database:  8361
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 21,038
Number of Sequences: 8361
Number of extensions: 21038
Number of successful extensions: 5631
Number of sequences better than 10.0: 951
length of query: 543
length of database: 7,895,291
effective HSP length: 16
effective length of query: 527
effective length of database: 7,761,515
effective search space: 4090318405
effective search space used: 4090318405
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 5. 3
Homology vs DNA 
Query= Contig-U01674-1 (Contig-U01674-1Q) /CSM_Contig/Contig-U01674-1Q.Seq.d
         (543 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU038973) Dictyostelium discoideum slug cDNA, clone SSM223.      478   e-136  2
(C92557) Dictyostelium discoideum slug cDNA, clone SSE683.        476   e-135  2
(AU072371) Dictyostelium discoideum slug cDNA, clone SSE330.      476   e-130  1
(AU038833) Dictyostelium discoideum slug cDNA, clone SSL538.      450   e-128  2
(AU037816) Dictyostelium discoideum slug cDNA, clone SSE330.      117   5e-22  1
(EE148352) SiJWF07BCJ5 Lausanne fire ant library Solenopsis ...    56   0.001  1
(EE148312) SiJWF07BCJ3 Lausanne fire ant library Solenopsis ...    56   0.001  1
(EE147115) SiJWF07BCJ2 Lausanne fire ant library Solenopsis ...    56   0.001  1
(EE146784) SiJWB09BDPR5G04 Lausanne fire ant library Solenop...    56   0.001  1
(EE146276) SiJWF07BCJ4 Lausanne fire ant library Solenopsis ...    56   0.001  1
(EE143118) SiJWB09BCL2 Lausanne fire ant library Solenopsis ...    56   0.001  1
(EE141529) SiJWH12BDO Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE141381) SiJWA03BDJ Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE140996) SiJWB09BDP Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE140767) SiJWG10BCJ Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE140759) SiJWF07BCJ Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE140327) SiJWE03BDF Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE139857) SiJWD08CAS Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE139842) SiJWB12CAS Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE138964) SiJWD09BCD Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE138811) SiJWG09BBY Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE138804) SiJWG02BBY Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE138311) SiJWE07BBS Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE138030) SiJWC02BBP Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE137494) SiJWB07AAH Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE136454) SiJWC12BAJ Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE136368) SiJWC05BAP Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE136208) SiJWB04BAK Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE136120) SiJWG06BAC Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE135847) SiJWH10BAR Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE135676) SiJWG11BAN Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE135507) SiJWF09BAL Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE135334) SiJWD03BAH Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE135236) SiJWA06BAE Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE135138) SiJWE12ADW Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE135057) SiJWE10ADT Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE134947) SiJWC04ADS Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE134630) SiJWA03BAD Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE134467) SiJWF05ADZ Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE134286) SiJWD07ADR Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE133632) SiJWE09ADY Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE132930) SiJWF12ADE Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE132203) SiJWH10ABN Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE131491) SiJWC08ACP Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE131177) SiJWE06ABT Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE130473) SiJWF12ABR Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE130440) SiJWD01ABR Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE130366) SiJWE04ABH Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE130317) SiJWH02ABY Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE130179) SiJWA11ABA Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE129346) SiJWD07ACO Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE128576) SiJWB05AAK Lausanne fire ant library Solenopsis i...    56   0.001  1
(EE127877) SiJWE03ACF Lausanne fire ant library Solenopsis i...    56   0.001  1
(CR954197) Medicago truncatula chromosome 5 clone mte1-80m7,...    52   0.022  1
(AC233570) Medicago truncatula clone mth2-75h15, WORKING DRA...    52   0.022  1
(AC150470) Macropus eugenii clone ME_KBa-588N19, complete se...    40   0.027  3
(EK164550) 1095458045960 Global-Ocean-Sampling_GS-31-01-01-1...    44   0.029  2
(X95276) Plasmodium falciparum complete gene map of plastid-...    38   0.052  3
(CN565118) tag24g04.x1 Hydra EST -Kiel 1 Hydra vulgaris cDNA...    40   0.072  2
(CN565381) tag24g04.y1 Hydra EST -Kiel 1 Hydra vulgaris cDNA...    40   0.073  2
(CR382379) Zebrafish DNA sequence from clone DKEY-175N5 in l...    50   0.089  1
(AC169511) Mus musculus BAC clone RP23-81P24 from chromosome...    50   0.089  1
(FJ387222) Dictyostelium discoideum chromosome 3 centromere ...    50   0.089  1
(AE014834) Plasmodium falciparum 3D7 chromosome 10 section 6...    50   0.089  1
(ED806025) MG__Bb0013A07r MG__Bb Mimulus guttatus genomic, g...    50   0.089  1
(EL504361) C07_1711_603.AB1 Blood stage Plasmodium falciparu...    50   0.089  1
(EY383116) CAXA4426.fwd CAXA Helobdella robusta Subtracted L...    50   0.089  1
(DC207552) Plasmodium berghei strain ANKA cDNA clone:MG00764...    40   0.12   2
(DC219925) Plasmodium berghei strain ANKA cDNA clone:MZ00179...    40   0.15   2
(CT513272) A BAC library has been constructed from cultivar ...    42   0.17   2
(CT115160) Sus scrofa genomic clone PigE-125I12, genomic sur...    36   0.18   2
(DQ642846) Plasmodium falciparum HB3 apicoplast, complete ge...    38   0.19   3
(BD452995) Diagnosis of Diseases Associated with tumor suppr...    36   0.19   4
(AX251474) Sequence 442 from Patent WO0168912.                     36   0.19   4
(AY553905) Surendra vivarna 16S large subunit ribosomal RNA ...    38   0.26   2
(CT027810) Zebrafish DNA sequence from clone CH211-66E23 in ...    40   0.27   5
(AM438828) Vitis vinifera contig VV78X030765.5, whole genome...    38   0.27   4
(AC187310) Canis lupus familiaris chromosome 25 clone XX-84I...    36   0.27   7
(EJ312292) 1095403233107 Global-Ocean-Sampling_GS-27-01-01-1...    34   0.27   3
(AM472470) Vitis vinifera contig VV78X278876.2, whole genome...    48   0.35   1
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041...    48   0.35   1
(AC157003) Bos taurus clone CH240-69J2, WORKING DRAFT SEQUEN...    48   0.35   1
(AC149771) Bos taurus clone CH240-14F15, *** SEQUENCING IN P...    48   0.35   1
(ER534755) 1093015813498 Global-Ocean-Sampling_GS-35-01-01-1...    48   0.35   1
(ER530719) 1093015748026 Global-Ocean-Sampling_GS-35-01-01-1...    48   0.35   1
(CL057637) CH216-85O7_Sp6.1 CH216 Xenopus (Silurana) tropica...    48   0.35   1
(DY779280) Sf1F10000-3-1 Spodoptera frugiperda Fat Body cDNA...    48   0.35   1
(DY777579) Sf1F06778-3-1 Spodoptera frugiperda Fat Body cDNA...    48   0.35   1
(EY337709) CAWY8516.fwd CAWY Helobdella robusta Subtracted E...    48   0.35   1
(DX520197) GH_MBb0039E05f GH_MBb Gossypium hirsutum genomic ...    36   0.45   3
(AY691413) Erium globosum cytochrome b (cytb) gene, partial ...    36   0.62   3
(EK215876) 1095460118470 Global-Ocean-Sampling_GS-31-01-01-1...    44   0.66   2
(CT827950) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    34   0.74   2
(AB265370) Sarcinodes mongaku gene for 16S rRNA, partial seq...    44   0.78   2
(AC024261) Arabidopsis thaliana chromosome 1 BAC F5D21 genom...    40   0.90   4
(CG750344) P044-4-E10.za Ppa EcoRI BAC Library Pristionchus ...    32   0.95   2
(EX620813) 255411923 Pea aphid whole body normalized full le...    36   0.97   2
(AW213828) uo43e06.x1 NCI_CGAP_Lu29 Mus musculus cDNA clone ...    34   1.0    2
(EE136897) SiJWA10BBB Lausanne fire ant library Solenopsis i...    34   1.0    2
(DB774530) Apis mellifera head cDNA, RIKEN full-length enric...    34   1.1    3
(DB777336) Apis mellifera head cDNA, RIKEN full-length enric...    34   1.1    3
(EU746611) Nasonia giraulti strain RV2 NADH dehydrogenase su...    34   1.2    3
(AL512430) Human DNA sequence from clone RP11-346C16 on chro...    42   1.3    3
(AC093102) Drosophila melanogaster clone BACR34C10, complete...    36   1.4    4
(CR391961) Zebrafish DNA sequence from clone DKEY-44G17 in l...    46   1.4    1
(BV895054) pRRL2:Newb:20080411:274642 USMARC Pig Breed SNP D...    46   1.4    1
(AM487147) Vitis vinifera contig VV78X012818.17, whole genom...    46   1.4    1
(AM423805) Vitis vinifera contig VV78X071106.22, whole genom...    46   1.4    1
(AB025617) Arabidopsis thaliana genomic DNA, chromosome 5, T...    46   1.4    1
(GC697780) Sequence 13025 from patent US 6812339.                  46   1.4    1
(AC163696) Ornithorhynchus anatinus BAC clone OABb-153I22 fr...    46   1.4    1
(AY553902) Arhopala abseus 16S large subunit ribosomal RNA g...    46   1.4    1
(AY623109) Homo sapiens TAF1 RNA polymerase II, TATA box bin...    46   1.4    1
(AL590762) Homo sapiens chromosome X  sequence from 6 PACs 1...    46   1.4    1
(AB191243) Homo sapiens DNA, transposon SVA sequence.              46   1.4    1
(AC137239) Rattus norvegicus clone CH230-unknown, *** SEQUEN...    46   1.4    1
(AC129233) Rattus norvegicus clone CH230-507L2, *** SEQUENCI...    46   1.4    1
(AC127181) Rattus norvegicus clone CH230-90N22, *** SEQUENCI...    46   1.4    1
(AC112021) Rattus norvegicus clone CH230-89O7, *** SEQUENCIN...    46   1.4    1
(AC110452) Rattus norvegicus clone CH230-45K1, *** SEQUENCIN...    46   1.4    1
(CU928985) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   1.4    1
(BH328716) CH230-188I1.TV CHORI-230 Segment 1 Rattus norvegi...    46   1.4    1
(AZ689824) ENTKQ71TF Entamoeba histolytica Sheared DNA Entam...    46   1.4    1
(FI257965) CccaBb036-I23JR CccABb Cajanus cajan genomic clon...    46   1.4    1
(AG762834) Macaca fuscata fuscata DNA, clone: MSB2-233M21_F,...    46   1.4    1
(CC261718) CH261-63N21_Sp6.1 CH261 Gallus gallus genomic clo...    46   1.4    1
(CV577826) kf23a02.y1 Globodera pallida Pa2 female Globodera...    46   1.4    1
(GD651609) 454PCS0279312 Scarlet Runner Bean globular-stage ...    46   1.4    1
(EY356684) CAWZ4490.fwd CAWZ Helobdella robusta Primary Late...    46   1.4    1
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl...    46   1.4    1
(CT998561) Zebrafish DNA sequence from clone DKEYP-13B9 in l...    38   1.4    2
(DX551584) GH_MBb0036I18r GH_MBb Gossypium hirsutum genomic ...    32   1.4    3
(AC159864) Bos taurus clone CH240-74K10, WORKING DRAFT SEQUE...    38   1.6    2
(BX681417) Zebrafish DNA sequence from clone DKEY-161L11 in ...    42   1.9    3
(EY481561) CBBP11447.fwd CBBP Hirudo medicinalis hermaphrodi...    42   1.9    2
(AC097931) Rattus norvegicus clone CH230-64G12, WORKING DRAF...    40   1.9    3
(EY499328) CBBP4619.fwd CBBP Hirudo medicinalis hermaphrodit...    42   2.0    2
(AL844509) Plasmodium falciparum chromosome 13.                    44   2.1    6
(BZ392851) EINDL25TR EI_10_12_KB Entamoeba invadens genomic ...    38   2.1    2
(EY490442) CBBP17651.fwd CBBP Hirudo medicinalis hermaphrodi...    42   2.2    2
(AM602569) Entamoeba invadens IP1 GSS, clone inv018c11.p1k.        38   2.2    2
(EK144409) 1095456012268 Global-Ocean-Sampling_GS-31-01-01-1...    42   2.2    2
(AQ869304) nbeb0034N12r CUGI Rice BAC Library (EcoRI) Oryza ...    42   2.3    2
(DE285448) Bombyx mori genomic DNA, BAC clone:BES_006_H10.         38   2.4    2
(FH222663) CHO_OF3383xd22r1.ab1 CHO_OF3 Nicotiana tabacum ge...    34   2.5    2
(AL513317) Human DNA sequence from clone RP11-393P6 on chrom...    40   2.5    4
(EJ070911) 1095458083692 Global-Ocean-Sampling_GS-26-01-01-1...    34   2.7    2
(AM460502) Vitis vinifera contig VV78X006177.8, whole genome...    42   2.7    2
(CR385021) Zebrafish DNA sequence from clone CH211-200N15 in...    38   2.8    4
(AE001398) Plasmodium falciparum 3D7 chromosome 2 section 35...    34   3.1    2
(CR407581) Zebrafish DNA sequence from clone DKEY-17A16 in l...    38   3.3    3
(AY770499) Coriandrum sativum delta-4-palmitoyl-ACP desatura...    34   3.4    2
(CT027567) Zebrafish DNA sequence from clone DKEY-31E3 in li...    38   3.4    3
(EJ250907) 1095344031541 Global-Ocean-Sampling_GS-27-01-01-1...    34   3.6    2
(EK267217) 1095462233273 Global-Ocean-Sampling_GS-31-01-01-1...    34   3.6    2
(DB781276) Apis mellifera head cDNA, RIKEN full-length enric...    34   3.7    2
(BX005150) Zebrafish DNA sequence from clone CH211-105J21 in...    34   3.8    4
(AC014106) Drosophila melanogaster, *** SEQUENCING IN PROGRE...    32   3.8    4
(EF518668) Pheidole minutula voucher RA0150 12S ribosomal RN...    40   4.0    2
(CB832817) USDA-FP_100619 Adult Alate Brown Citrus Aphid Tox...    30   4.0    3
(AC125025) Mus musculus chromosome 5, clone RP24-340K5, comp...    40   4.0    3
(DQ927305) Tetrahymena pigmentosa strain UM1060 mitochondrio...    34   4.1    5
(EL241479) EB3RODY02GOTLU 8-day Arabidopsis seedlings, aeria...    34   4.1    2
(CU464015) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    40   4.1    4
(AC146107) Pan troglodytes BAC clone RP43-5K14 from chromoso...    40   4.5    3
(FP102863) Medicago truncatula chromosome 5 clone mth2-192k6...    36   4.8    4
(CR854983) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    34   4.9    4
(CU915764) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    38   5.2    2
(CR974486) Mouse DNA sequence from clone RP23-66G6 on chromo...    40   5.3    2
(AP001269) Homo sapiens genomic DNA, chromosome 18 clone:RP1...    40   5.3    2
(DD061484) Methods and nucleic acids for the analysis of  he...    36   5.4    2
(DD061338) Methods and nucleic acids for the analysis of  he...    36   5.4    2
(AX599046) Sequence 386 from Patent WO02077272.                    36   5.4    2
(AX598900) Sequence 240 from Patent WO02077272.                    36   5.4    2
(CU151884) Zebrafish DNA sequence from clone CH211-196H1.          44   5.5    1
(CR848715) Zebrafish DNA sequence from clone RP71-23N3.            44   5.5    1
(CR762391) Zebrafish DNA sequence from clone DKEYP-52F4 in l...    44   5.5    1
(BX936425) Zebrafish DNA sequence from clone CH211-39L24 in ...    44   5.5    1
(BX571960) Zebrafish DNA sequence from clone DKEY-165I8 in l...    44   5.5    1
(BX511129) Zebrafish DNA sequence from clone RP71-68N21 in l...    44   5.5    1
(BX323837) Zebrafish DNA sequence from clone DKEY-5N7 in lin...    44   5.5    1
(BX323816) Zebrafish DNA sequence from clone DKEY-38N6.            44   5.5    1
(GF096179) 59687 Glycine max young leaves DNA Glycine max ST...    44   5.5    1
(GF030757) pRRL2:Newb:20080411:410661 USMARC Pig Breed SNP D...    44   5.5    1
(CT027571) Mouse DNA sequence from clone RP24-354E11 on chro...    44   5.5    1
(AL683845) Mouse DNA sequence from clone RP23-423B1 on chrom...    44   5.5    1
(AL607025) Mouse DNA sequence from clone RP23-331L12 on chro...    44   5.5    1
(AJ421479) Mus musculus X-inactivation center region; segmen...    44   5.5    1
(AC154300) Mus musculus BAC clone RP23-390F4 from 12, comple...    44   5.5    1
(AC154181) Mus musculus BAC clone RP24-471B11 from chromosom...    44   5.5    1
(AC095876) Rattus norvegicus  BAC CH230-10G12 (Children's Ho...    44   5.5    1
(AC197158) Pan troglodytes BAC clone CH251-679F7 from chromo...    44   5.5    1
(AC192964) Pan troglodytes BAC clone CH251-716F9 from chromo...    44   5.5    1
(EF380351) Buxus microphylla chloroplast, complete genome.         44   5.5    1
(AM920428) Penicillium chrysogenum Wisconsin 54-1255 complet...    44   5.5    1
(AM470323) Vitis vinifera contig VV78X133629.4, whole genome...    44   5.5    1
(AM449753) Vitis vinifera contig VV78X067469.2, whole genome...    44   5.5    1
(AM429046) Vitis vinifera contig VV78X149461.45, whole genom...    44   5.5    1
(AC232344) Oryza minuta clone OM__Ba0086A04, complete sequence.    44   5.5    1
(AC187866) Populus trichocarpa clone Pop1-7B1, complete sequ...    44   5.5    1
(AC021198) Sequence of BAC F14D7 from Arabidopsis thaliana c...    44   5.5    1
(EF546311) Palinustus unicornutus isolate PU1 16S ribosomal ...    44   5.5    1
(AB265425) Operophtera rectipostmediana gene for 16S rRNA, p...    44   5.5    1
(AB265424) Nothoporinia mediolineata gene for 16S rRNA, part...    44   5.5    1
(AP002370) Homo sapiens genomic DNA, chromosome 11 clone:RP1...    44   5.5    1
(AP000773) Homo sapiens genomic DNA, chromosome 11q, clone:C...    44   5.5    1
(AL513488) Human DNA sequence from clone RP11-132G10 on chro...    44   5.5    1
(AL353696) Human DNA sequence from clone RP11-560G8 on chrom...    44   5.5    1
(AL109749) Human DNA sequence from clone RP6-213H19 on chrom...    44   5.5    1
(AC108866) Homo sapiens BAC clone RP11-44D21 from 4, complet...    44   5.5    1
(AC104652) Homo sapiens BAC clone RP11-273F23 from 4, comple...    44   5.5    1
(AC156865) Bos taurus clone CH240-64L7, WORKING DRAFT SEQUEN...    44   5.5    1
(AC142726) Macaca mulatta clone CH250-272P10, *** SEQUENCING...    44   5.5    1
(AC138296) Mus musculus chromosome 12 clone RP23-128O19 map ...    44   5.5    1
(AC118490) Rattus norvegicus clone CH230-355H23, WORKING DRA...    44   5.5    1
(FP102170) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    44   5.5    1
(FP017146) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   5.5    1
(FP015801) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   5.5    1
(CU639431) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   5.5    1
(AC080170) Homo sapiens chromosome 10 clone RP11-435B15 map ...    44   5.5    1
(CU407283) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   5.5    1
(CT027983) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    44   5.5    1
(AC233188) Lama pacos clone CH246-474C1, WORKING DRAFT SEQUE...    44   5.5    1
(AC231204) Lama pacos clone CH246-260A19, WORKING DRAFT SEQU...    44   5.5    1
(AC230470) Bos taurus clone CH240-508H13, WORKING DRAFT SEQU...    44   5.5    1
(AC223709) Bos taurus clone CH240-461A6, WORKING DRAFT SEQUE...    44   5.5    1
(AC223701) Bos taurus clone CH240-460M23, WORKING DRAFT SEQU...    44   5.5    1
(AC220372) Bos taurus clone CH240-360B16, WORKING DRAFT SEQU...    44   5.5    1
(AC172782) Bos taurus clone CH240-257H7, WORKING DRAFT SEQUE...    44   5.5    1
(AC172621) Bos taurus clone CH240-158J19, WORKING DRAFT SEQU...    44   5.5    1
(AC165584) Bos taurus clone CH240-169D23, WORKING DRAFT SEQU...    44   5.5    1
(AC018708) Homo sapiens chromosome 11 clone RP11-118L16, WOR...    44   5.5    1
(BH557136) BOGWW71TR BOGW Brassica oleracea genomic clone BO...    44   5.5    1
(ET105403) QM0AAC11AF12FM1 CCH3 Citrus clementina genomic cl...    44   5.5    1
(EK211909) 1095460101582 Global-Ocean-Sampling_GS-31-01-01-1...    44   5.5    1
(AM637637) Entamoeba dispar GSS, clone dispar46f05.p1k.            44   5.5    1
(EJ302088) 1095390035131 Global-Ocean-Sampling_GS-27-01-01-1...    44   5.5    1
(ED801218) MG__Ba0010O12r MG__Ba Mimulus guttatus genomic, g...    44   5.5    1
(ED707898) GM_WBb0053K08.f GM_WBb Glycine max genomic clone ...    44   5.5    1
(ED705981) GM_WBb0050O03.r GM_WBb Glycine max genomic clone ...    44   5.5    1
(DX555753) GH_MBb0033H10f GH_MBb Gossypium hirsutum genomic ...    44   5.5    1
(DX408355) SOYB966TV LargeInsertSoybeanGenLibBuild4 Glycine ...    44   5.5    1
(DU220174) 1098553721649 CHORI-243 Ovis aries genomic clone ...    44   5.5    1
(AL301684) Tetraodon nigroviridis genome survey sequence T7 ...    44   5.5    1
(AL301351) Tetraodon nigroviridis genome survey sequence T7 ...    44   5.5    1
(AL178763) Tetraodon nigroviridis genome survey sequence T7 ...    44   5.5    1
(AG974574) Drosophila simulans DNA, clone: DSM1-016E12.R.fa,...    44   5.5    1
(DH395965) Oryzias latipes Fosmid clone:GOLWFno794_n04, forw...    44   5.5    1
(DE522450) Bombyx mori genomic DNA, Fosmid clone:GBMFno142_g...    44   5.5    1
(CZ955641) 273959 Tomato EcoRI BAC Library Solanum lycopersi...    44   5.5    1
(CW979071) KBrH001J09R KBrH, Brassica rapa HindIII BAC libra...    44   5.5    1
(CW505282) OP__Ba0008O12.f OP__Ba Oryza punctata genomic clo...    44   5.5    1
(CU015681) Equus caballus GSS, BAC clone CH241-90B3, T7 end ...    44   5.5    1
(CT370439) Sus scrofa genomic clone CH242-478A15, genomic su...    44   5.5    1
(BH928331) odi69b05.g1 B.oleracea002 Brassica oleracea genom...    44   5.5    1
(BH657779) BOMIK48TF BO_2_3_KB Brassica oleracea genomic clo...    44   5.5    1
(AG226764) Lotus japonicus DNA, clone:LjB14j16_r.                  44   5.5    1
(AG092560) Pan troglodytes DNA, clone: PTB-092M04.R.               44   5.5    1
(EG414915) SAAH-aab26h04.b1 Agen 0058 Schmidtea mediterranea...    44   5.5    1
(EE208672) a3e11z2.r1 Danio rerio 12am (night) eye/brain cDN...    44   5.5    1
(BY755553) Mus musculus 16 days neonate male medulla oblonga...    44   5.5    1
(BM165985) EST568508 PyBS Plasmodium yoelii yoelii cDNA clon...    44   5.5    1
(BJ429781) Dictyostelium discoideum cDNA clone:ddv4i23, 3' e...    44   5.5    1
(BJ429631) Dictyostelium discoideum cDNA clone:ddv4e09, 3' e...    44   5.5    1
(BJ396861) Dictyostelium discoideum cDNA clone:dds44p03, 5' ...    44   5.5    1
(BJ340845) Dictyostelium discoideum cDNA clone:dda4i05, 3' e...    44   5.5    1
(BI504888) BB170014A10H03.5 Bee Brain Normalized/Subtracted ...    44   5.5    1
(FG298153) 1108793301044 New World Screwworm Larvae 9387 EST...    44   5.5    1
(FG283949) 1108770645175 New World Screwworm Egg 9261 ESTs C...    44   5.5    1
(FE239178) CAPG5227.fwd CAPG Naegleria gruberi amoeba stage ...    44   5.5    1
(FC518882) CBFU2752.rev CBFU Thalassiosira pseudonana Iron l...    44   5.5    1
(EX837518) CBNB6961.fwd CBNB Phycomyces blakesleeanus NRRL15...    44   5.5    1
(CP000814) Campylobacter jejuni subsp. jejuni 81116, complet...    44   5.5    1
(CR346163) mte1-8M24FM1 BAC end, cultivar Jemalong A17 of Me...    36   5.8    2
(BX567118) Glossina morsitans morsitans (Tseatse fly) EST fr...    38   5.8    2
(CR376801) Zebrafish DNA sequence from clone CH211-13K18 in ...    38   5.8    4
(AC007399) Arabidopsis thaliana BAC F14I23 from chromosome V...    40   5.9    3
(BX553005) Glossina morsitans morsitans (Tseatse fly) EST fr...    38   5.9    2
(AC074357) Mus musculus clone RP23-448A21, WORKING DRAFT SEQ...    42   6.0    3
(BX564378) Glossina morsitans morsitans (Tseatse fly) EST fr...    38   6.0    2
(BX557052) Glossina morsitans morsitans (Tseatse fly) EST fr...    38   6.6    2
(CT954324) Mouse DNA sequence from clone RP23-36P5 on chromo...    38   6.7    2
(AB025602) Arabidopsis thaliana genomic DNA, chromosome 5, B...    40   6.9    3
(AL445565) Mycoplasma pulmonis (strain UAB CTIP) complete ge...    34   6.9    8
(BH769236) BMBAC364F04T7_PSU Brugia malayi Genomic Bac Libra...    34   7.0    2
(AC156796) Mus musculus BAC clone RP24-90N20 from chromosome...    38   7.0    2
(DD000854) PLANT ARTIFICIAL CHROMOSOME COMPOSITIONS AND METH...    42   7.1    2
(AX059539) Sequence 272 from Patent WO0055325.                     42   7.1    2
(AP007620) Lotus japonicus genomic DNA, chromosome 2, clone:...    42   7.1    4
(BX561814) Glossina morsitans morsitans (Tseatse fly) EST fr...    38   7.2    2
(BW717173) Branchiostoma floridae cDNA, adult clone:bfad025b...    34   7.2    3
(AC234758) Brassica rapa subsp. pekinensis chromosome Linkag...    38   7.5    4
(AM482764) Vitis vinifera, whole genome shotgun sequence, co...    42   7.6    2
(DD010736) Diagnosis of known genetic Parameters within the ...    32   7.9    2
(FM969325) Glossina morsitans morsitans EST, clone GMsg62c11...    38   7.9    2
(AC118080) Rattus norvegicus clone CH230-376M16, *** SEQUENC...    40   8.0    2
(CE414001) tigr-gss-dog-17000362550840 Dog Library Canis lup...    40   8.3    2
(AM617753) Entamoeba invadens IP1 GSS, clone inv102g05.q1k.        38   8.4    2
(FM972352) Glossina morsitans morsitans EST, clone GMsg58e03...    38   8.7    2
(EJ654284) 1092955000212 Global-Ocean-Sampling_GS-30-02-01-1...    40   8.7    2
(CN758103) ID0AAA21BC10RM1 ApMS Acyrthosiphon pisum cDNA clo...    36   8.9    2
(CL785409) OR_BBa0102M07.f OR_BBa Oryza nivara genomic clone...    36   9.0    2
(AY484748) Graptacme eborea mitochondrion, complete genome.        42   9.1    2
(AB016873) Arabidopsis thaliana genomic DNA, chromosome 5, T...    36   9.4    2
(AX344565) Sequence 16 from Patent WO0200932.                      32   9.4    2
(AM453785) Vitis vinifera contig VV78X245887.19, whole genom...    34   9.4    3
(EK287230) 1095462316991 Global-Ocean-Sampling_GS-31-01-01-1...    36   9.4    2
(DV604168) EST1207164 Glossina morsitans morsitans Fat body ...    38   9.6    2
(CO389521) AGENCOURT_26625198 NIH_MGC_253 Rattus norvegicus ...    36   9.8    2
(CZ538548) SRAA-aad20d03.b1 Strongyloides ratti whole genome...    38   9.9    2

>(AU038973) Dictyostelium discoideum slug cDNA, clone SSM223.
          Length = 352

 Score =  478 bits (241), Expect(2) = e-136
 Identities = 241/241 (100%)
 Strand = Plus / Plus


Query: 1   aaagaaatcatataaaaaatggttgcaattttcaactttcaaagtttattagttgtaata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aaagaaatcatataaaaaatggttgcaattttcaactttcaaagtttattagttgtaata 60


Query: 61  ttattatttatttgcacatgcacatatattagagggtcctatccatcacttttagaagtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttattatttatttgcacatgcacatatattagagggtcctatccatcacttttagaagtt 120


Query: 121 agagataaacatagttttagtggtttaccgagaaaagctgcaattataggtgaaagatta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agagataaacatagttttagtggtttaccgagaaaagctgcaattataggtgaaagatta 180


Query: 181 tctccatgggtttcagcatgttgtcttattatgggtttatggacattatataattaaaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctccatgggtttcagcatgttgtcttattatgggtttatggacattatataattaaaat 240


Query: 241 c 241
           |
Sbjct: 241 c 241

 Score = 40.1 bits (20), Expect(2) = e-136
 Identities = 20/20 (100%)
 Strand = Plus / Plus


Query: 259 caattttcaaatcataggtg 278
           ||||||||||||||||||||
Sbjct: 258 caattttcaaatcataggtg 277

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 486,036,752
Number of extensions: 33668611
Number of successful extensions: 3440095
Number of sequences better than 10.0: 312
Length of query: 543
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 520
Effective length of database: 99,442,330,388
Effective search space: 51710011801760
Effective search space used: 51710011801760
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.18
Homology vs Protein 
Query= Contig-U01674-1 (Contig-U01674-1Q) /CSM_Contig/Contig-U01674-1Q.Seq.d
         (543 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54HH9) RecName: Full=Transmembrane protein 167 homolog; Flags:...   148   8e-35
(Q5BJC2) RecName: Full=Transmembrane protein 167A; Flags: Precur...    80   3e-14
EU954736_1(EU954736|pid:none) Zea mays clone 1479507 hypothetica...    79   6e-14
BT073183_1(BT073183|pid:none) Oncorhynchus mykiss clone omyk-evn...    79   6e-14
BT057354_1(BT057354|pid:none) Salmo salar clone ssal-rgb-533-275...    79   6e-14
BT057904_1(BT057904|pid:none) Salmo salar clone ssal-sjb-020-354...    79   8e-14
(Q5RAL1) RecName: Full=Transmembrane protein 167A; Flags: Precur...    78   1e-13
(Q9VWH8) RecName: Full=Transmembrane protein 167 homolog; Flags:...    78   1e-13
AC104274_10(AC104274|pid:none) Oryza sativa (japonica cultivar-g...    77   2e-13
(B5G2S6) RecName: Full=Transmembrane protein 167A; Flags: Precur...    77   3e-13
BT047897_1(BT047897|pid:none) Salmo salar clone ssal-evd-572-052...    77   3e-13
BT057365_1(BT057365|pid:none) Salmo salar clone ssal-evf-512-028...    77   3e-13
CR761906_1(CR761906|pid:none) Xenopus tropicalis finished cDNA, ...    76   5e-13
BT076291_1(BT076291|pid:none) Caligus rogercresseyi clone crog-e...    76   5e-13
BC129754_1(BC129754|pid:none) Xenopus laevis hypothetical protei...    76   7e-13
EF134048_1(EF134048|pid:none) Perkinsus chesapeaki isolate Pch_c...    76   7e-13
CR382130_153(CR382130|pid:none) Yarrowia lipolytica strain CLIB1...    75   8e-13
CU928171_435(CU928171|pid:none) Kluyveromyces thermotolerans str...    75   8e-13
BT073726_1(BT073726|pid:none) Oncorhynchus mykiss clone omyk-evo...    75   8e-13
AK012161_1(AK012161|pid:none) Mus musculus 10 days embryo whole ...    75   1e-12
AL669990_11(AL669990|pid:none) Neurospora crassa DNA linkage gro...    75   1e-12
FN318601_1(FN318601|pid:none) Schistosoma japonicum isolate Anhu...    75   1e-12
CP000595_166(CP000595|pid:none) Ostreococcus lucimarinus CCE9901...    71   2e-11
AP008208_1039(AP008208|pid:none) Oryza sativa (japonica cultivar...    71   2e-11
CP000500_431(CP000500|pid:none) Pichia stipitis CBS 6054 chromos...    70   4e-11
AM920431_252(AM920431|pid:none) Penicillium chrysogenum Wisconsi...    70   5e-11
AM270157_68(AM270157|pid:none) Aspergillus niger contig An08c002...    70   5e-11
EF179421_1(EF179421|pid:none) Xenopsylla cheopis clone XC-217 co...    69   8e-11
CU928173_78(CU928173|pid:none) Zygosaccharomyces rouxii strain C...    69   8e-11
AE016817_191(AE016817|pid:none) Ashbya gossypii (= Eremothecium ...    67   2e-10
CR382133_443(CR382133|pid:none) Debaryomyces hansenii strain CBS...    67   3e-10
AM502253_30(AM502253|pid:none) Leishmania infantum chromosome 35.      65   1e-09
CP000081_22(CP000081|pid:none) Leishmania major chromosome 35, c...    65   1e-09
CR940348_582(CR940348|pid:none) Theileria annulata strain Ankara...    54   3e-06
(Q6AZW1) RecName: Full=Transmembrane protein 167B; Flags: Precur...    49   7e-05
Z70284_20(Z70284|pid:none) Caenorhabditis elegans Cosmid K07F5, ...    49   7e-05
T23419(T23419)hypothetical protein K07F5.14 - Caenorhabditis ele...    49   7e-05
(Q28GL2) RecName: Full=Transmembrane protein 167B; Flags: Precur...    49   9e-05
BT049333_1(BT049333|pid:none) Salmo salar clone ssal-rgb2-545-07...    47   3e-04
(Q0IIL4) RecName: Full=Transmembrane protein 167B; Flags: Precur...    47   4e-04
(Q5RAU6) RecName: Full=Transmembrane protein 167B; Flags: Precur...    46   6e-04
EU959250_1(EU959250|pid:none) Zea mays clone 213095 unknown mRNA.      45   0.001
BT081900_1(BT081900|pid:none) Rana catesbeiana clone rcat-evr-52...    45   0.001
BT056420_1(BT056420|pid:none) Salmo salar clone ssal-eve-570-241...    43   0.005

>(Q54HH9) RecName: Full=Transmembrane protein 167 homolog; Flags:
           Precursor;
          Length = 72

 Score =  148 bits (374), Expect = 8e-35
 Identities = 71/71 (100%), Positives = 71/71 (100%)
 Frame = +1

Query: 19  MVAIFNFQSLLVVILLFICTCTYIRGSYPSLLEVRDKHSFSGLPRKAAIIGERLSPWVSA 198
           MVAIFNFQSLLVVILLFICTCTYIRGSYPSLLEVRDKHSFSGLPRKAAIIGERLSPWVSA
Sbjct: 1   MVAIFNFQSLLVVILLFICTCTYIRGSYPSLLEVRDKHSFSGLPRKAAIIGERLSPWVSA 60

Query: 199 CCLIMGLWTLY 231
           CCLIMGLWTLY
Sbjct: 61  CCLIMGLWTLY 71

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 515,950,536
Number of extensions: 7364793
Number of successful extensions: 11894
Number of sequences better than 10.0: 44
Number of HSP's gapped: 11857
Number of HSP's successfully gapped: 44
Length of query: 181
Length of database: 1,051,180,864
Length adjustment: 120
Effective length of query: 61
Effective length of database: 662,793,784
Effective search space: 40430420824
Effective search space used: 40430420824
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
PSORT 

 psg: 0.40  gvh: 0.23  alm: 0.48  top: 0.53  tms: 0.00  mit: 0.46  mip: 0.00
 nuc: 0.39  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 64.0 %: nuclear
	 24.0 %: cytoplasmic
	  4.0 %: cytoskeletal
	  4.0 %: mitochondrial
	  4.0 %: endoplasmic reticulum

>> prediction for Contig-U01674-1 is nuc
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 4
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0