Contig-U10418-1 |
Contig ID |
Contig-U10418-1 |
Contig update |
2002. 9.13 |
Contig sequence |
|
Gap |
no gap |
Contig length |
748 |
Chromosome number (1..6, M) |
6 |
Chromosome length |
3595308 |
Start point |
2530710 |
End point |
2529962 |
Strand (PLUS/MINUS) |
MINUS |
Number of clones |
8 |
Number of EST |
8 |
Link to clone list |
U10418 |
List of clone(s) |
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.10 |
Homology vs CSM-cDNA |
|
dna update |
2008.11.20 |
Homology vs DNA |
Query= Contig-U10418-1 (Contig-U10418-1Q) /CSM_Contig/Contig-U10418-1Q.Seq.d (748 letters)
Database: ddbj_A 92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(AU269972) Dictyostelium discoideum vegetative cDNA clone:VS... 472 0.0 4 (AU265422) Dictyostelium discoideum vegetative cDNA clone:VS... 472 0.0 4 (AU264755) Dictyostelium discoideum vegetative cDNA clone:VS... 472 0.0 4 (BJ413939) Dictyostelium discoideum cDNA clone:ddv17p11, 5' ... 472 0.0 4 (BJ432054) Dictyostelium discoideum cDNA clone:ddv17p11, 3' ... 472 0.0 5 (AU265423) Dictyostelium discoideum vegetative cDNA clone:VS... 559 0.0 2 (AU263428) Dictyostelium discoideum vegetative cDNA clone:VS... 472 0.0 3 (AU262301) Dictyostelium discoideum vegetative cDNA clone:VS... 472 0.0 3 (AU269973) Dictyostelium discoideum vegetative cDNA clone:VS... 472 0.0 3 (AU265485) Dictyostelium discoideum vegetative cDNA clone:VS... 472 0.0 3 (AU265484) Dictyostelium discoideum vegetative cDNA clone:VS... 424 0.0 3 (AU264754) Dictyostelium discoideum vegetative cDNA clone:VS... 408 0.0 3 (AU263261) Dictyostelium discoideum vegetative cDNA clone:VS... 337 e-177 2 (CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 36 3e-06 17 (CU469464) Candidatus Phytoplasma mali strain AT complete ch... 34 8e-05 16 (CR382400) Plasmodium falciparum chromosome 6, complete sequ... 34 1e-04 13 (AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 40 0.003 16 (AU262701) Dictyostelium discoideum vegetative cDNA clone:VS... 52 0.004 2 (AF190870) Gorilla gorilla X chromosome clone 2, partial seq... 46 0.014 2 (AC152094) Bos taurus clone CH240-2B20, WORKING DRAFT SEQUEN... 38 0.022 7 (AP010397) Lotus japonicus genomic DNA, chromosome 3, clone:... 52 0.031 1 (AP006139) Lotus japonicus genomic DNA, chromosome 3, clone:... 52 0.031 1 (BX324115) Zebrafish DNA sequence from clone DKEYP-70E6 in l... 36 0.040 11 (CP000552) Prochlorococcus marinus str. MIT 9515, complete g... 32 0.049 22 (BD061520) Genome DNA of symbiotic bacteria of aphid. 32 0.061 16 (AR409405) Sequence 1 from patent US 6632935. 32 0.061 16 (BA000003) Buchnera aphidicola str. APS (Acyrthosiphon pisum... 32 0.061 16 (CP000084) Candidatus Pelagibacter ubique HTCC1062, complete... 34 0.065 20 (AM453163) Vitis vinifera contig VV78X098949.2, whole genome... 46 0.066 3 (FH112964) CHO_OF3040xg12f1.ab1 CHO_OF3 Nicotiana tabacum ge... 30 0.069 4 (AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 36 0.079 7 (Z97181) Human DNA sequence from clone RP1-95C20 on chromoso... 36 0.083 6 (CU457801) M.truncatula DNA sequence from clone MTH2-38N16 o... 38 0.092 7 (CU468235) M.truncatula DNA sequence *** SEQUENCING IN PROGR... 38 0.092 7 (CC573808) CH240_450N5.TARBAC13P2 CHORI-240 Bos taurus genom... 38 0.095 2 (EJ568406) 1092960011697 Global-Ocean-Sampling_GS-29-01-01-1... 38 0.097 2 (EJ872968) 1093018355550 Global-Ocean-Sampling_GS-30-02-01-1... 38 0.10 2 (AE016826) Buchnera aphidicola str. Bp (Baizongia pistaciae)... 34 0.11 16 (AC011949) Homo sapiens clone RP11-17E12, WORKING DRAFT SEQU... 40 0.12 8 (AX339169) Sequence 36 from Patent WO0176451. 50 0.12 1 (AC083810) Homo sapiens 12 BAC RP11-809N1 (Roswell Park Canc... 50 0.12 1 (AY458637) Uncultured marine bacterium 440 clone EBAC750-02H... 50 0.12 1 (AC213540) Populus trichocarpa clone POP053-A08, complete se... 40 0.13 7 (AC215840) Populus trichocarpa clone POP043-C12, complete se... 38 0.14 6 (AC165276) Medicago truncatula chromosome 2 BAC clone mth2-1... 34 0.17 8 (AC156763) Dasypus novemcinctus clone VMRC5-378P15, WORKING ... 42 0.18 5 (CR388410) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 0.18 8 (AC097765) Rattus norvegicus clone CH230-51L21, *** SEQUENCI... 44 0.20 5 (AC149288) Solanum demissum chromosome 5 clone PGEC446J10, c... 36 0.24 6 (AC116960) Dictyostelium discoideum chromosome 2 map complem... 34 0.24 10 (CU464121) Zebrafish DNA sequence from clone CH73-357K2 in l... 38 0.24 5 (AC160208) Bos taurus clone CH240-79C12, WORKING DRAFT SEQUE... 36 0.27 2 (AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 32 0.28 10 (AM473760) Vitis vinifera contig VV78X088357.8, whole genome... 36 0.31 2 (EB203868) PEG002-C-002414-301 Normalized Pedal-Pleural Gang... 38 0.31 2 (AF098498) Caenorhabditis elegans cosmid C04D1, complete seq... 40 0.32 3 (BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 38 0.33 16 (AC189186) Brassica rapa subsp. pekinensis clone KBrB001J13,... 40 0.34 4 (AM484189) Vitis vinifera contig VV78X046606.1, whole genome... 36 0.34 2 (CT488700) A BAC library has been constructed from cultivar ... 36 0.35 2 (AC011947) Homo sapiens clone RP11-17D12, WORKING DRAFT SEQU... 40 0.36 7 (AX345201) Sequence 272 from Patent WO0200928. 44 0.37 3 (AE017308) Mycoplasma mobile 163K complete genome. 36 0.38 13 (AL929354) Plasmodium falciparum strain 3D7, chromosome 5, s... 32 0.39 13 (AC079055) Homo sapiens clone RP11-164M22, WORKING DRAFT SEQ... 32 0.40 9 (AL929356) Plasmodium falciparum strain 3D7, chromosome 9; s... 34 0.45 12 (EJ522905) 1092955156459 Global-Ocean-Sampling_GS-29-01-01-1... 36 0.46 3 (EK130350) 1093006417636 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.48 1 (EK109441) 1092963089061 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.48 1 (DX269074) OR_ABa0164E13.f OR_ABa Oryza ridleyi genomic clon... 48 0.48 1 (DX240369) OR_ABa0124B16.r OR_ABa Oryza ridleyi genomic clon... 48 0.48 1 (AX345350) Sequence 421 from Patent WO0200928. 44 0.50 3 (CP000721) Clostridium beijerinckii NCIMB 8052, complete gen... 34 0.52 18 (CP000770) Candidatus Sulcia muelleri GWSS, complete genome. 32 0.66 9 (AF528097) Clostridium tetani E88 plasmid pE88, complete seq... 38 0.68 5 (BM613287) 17000659179849 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 0.69 3 (AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1... 32 0.69 12 (BM596374) 17000687478531 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 0.70 3 (BM635456) 17000687558313 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 0.71 3 (BM579941) 17000687241498 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 0.71 3 (CU019623) Zebrafish DNA sequence from clone CH211-119M14 in... 38 0.71 5 (BM613669) 17000687139077 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 0.72 3 (AL844506) Plasmodium falciparum chromosome 7. 36 0.72 15 (AC068474) Homo sapiens chromosome 4 clone RP11-30A11 map 4,... 42 0.74 6 (CP000395) Borrelia afzelii PKo, complete genome. 36 0.75 17 (ET437639) Ea212F Edhazardia aedis pCR4Blunt-TOPO library Ed... 34 0.75 3 (ED704525) GM_WBb0048L14.f GM_WBb Glycine max genomic clone ... 44 0.76 2 (AJ831637) Zygaena felix boursini mitochondrial tRNA-Leu (CU... 28 0.78 5 (AJ831730) Zygaena mana chaos mitochondrial tRNA-Leu (CUN) g... 28 0.78 5 (AL354737) Human DNA sequence from clone RP11-569H20 on chro... 34 0.82 7 (AC212650) Solanum lycopersicum chromosome 7 clone C07SLm003... 36 0.83 5 (AC165053) Phakopsora pachyrhizi clone JGIAFNA-1305N22, comp... 40 0.84 2 (BA000021) Wigglesworthia glossinidia endosymbiont of Glossi... 34 0.87 12 (EI359166) GM_WBc0111M18.r GM_WBc Glycine max genomic clone ... 44 0.95 2 (AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 34 0.96 13 (AC116030) Dictyostelium discoideum chromosome 2 map 2090851... 32 1.0 5 (AP003667) Mus musculus genomic DNA, chromosome 16q clone:RP... 38 1.0 4 (AC164406) Mus musculus chromosome 3, clone RP24-391L20, com... 36 1.0 2 (AL391867) Human DNA sequence from clone RP11-402M4 on chrom... 44 1.0 4 (AL445565) Mycoplasma pulmonis (strain UAB CTIP) complete ge... 36 1.1 10
>(AU269972) Dictyostelium discoideum vegetative cDNA clone:VSJ472, 5' end single read. Length = 651
Score = 472 bits (238), Expect(4) = 0.0 Identities = 238/238 (100%) Strand = Plus / Plus
Query: 249 aatattttaagatttttatcacaagaatttaatttaaaccaatattatggtgaaacatta 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 228 aatattttaagatttttatcacaagaatttaatttaaaccaatattatggtgaaacatta 287
Query: 309 ttagaaaaaactaaagttgatacatatttagattggatgcatttaggaattagagcttat 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 ttagaaaaaactaaagttgatacatatttagattggatgcatttaggaattagagcttat 347
Query: 369 tcacaatcattatttgctcaaaaatatttaatgccaaaatttggtactgatttatataat 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 tcacaatcattatttgctcaaaaatatttaatgccaaaatttggtactgatttatataat 407
Query: 429 gataaaaatttaaatgctgaagaaggtgtaccaattggtttaaaacaaattgaaaatg 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 gataaaaatttaaatgctgaagaaggtgtaccaattggtttaaaacaaattgaaaatg 465
Score = 317 bits (160), Expect(4) = 0.0 Identities = 160/160 (100%) Strand = Plus / Plus
Query: 495 aaaaaatggtaaaaacaaatatattgttggtgatcgtttaacaattgctgatttttcatg 554 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 473 aaaaaatggtaaaaacaaatatattgttggtgatcgtttaacaattgctgatttttcatg 532
Query: 555 ttattctgaacttaaacaattagaaggaataaaatatgatttttcaccatataaagcaat 614 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 533 ttattctgaacttaaacaattagaaggaataaaatatgatttttcaccatataaagcaat 592
Query: 615 tgaaaattggaaaaaacaaatggaatcattagatggatat 654 |||||||||||||||||||||||||||||||||||||||| Sbjct: 593 tgaaaattggaaaaaacaaatggaatcattagatggatat 632
Score = 256 bits (129), Expect(4) = 0.0 Identities = 129/129 (100%) Strand = Plus / Plus
Query: 20 caaaaatacaaataaaaatgtcagataaaataattttatatggtgatttaatatcacaac 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaaatacaaataaaaatgtcagataaaataattttatatggtgatttaatatcacaac 60
Query: 80 ccgttcgtgctgtttattggtttttagtttttaataaaatagattttgaactccatgaaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgttcgtgctgtttattggtttttagtttttaataaaatagattttgaactccatgaaa 120
Query: 140 ttttacttg 148 ||||||||| Sbjct: 121 ttttacttg 129
Score = 89.7 bits (45), Expect(4) = 0.0 Identities = 45/45 (100%) Strand = Plus / Plus
Query: 205 gccagcattgaaatataaaggcgaaatttatattgagtcacataa 249 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 gccagcattgaaatataaaggcgaaatttatattgagtcacataa 229
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 92845959 Number of Hits to DB: 998,665,121 Number of extensions: 72570726 Number of successful extensions: 6781765 Number of sequences better than 10.0: 417 Length of query: 748 Length of database: 95,242,211,685 Length adjustment: 24 Effective length of query: 724 Effective length of database: 97,308,875,965 Effective search space: 70451626198660 Effective search space used: 70451626198660 X1: 11 (21.8 bits) S2: 22 (44.1 bits)
|
protein update |
2009. 6.27 |
Homology vs Protein |
Query= Contig-U10418-1 (Contig-U10418-1Q) /CSM_Contig/Contig-U10418-1Q.Seq.d (748 letters)
Database: nrp_A 3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
AE013599_921(AE013599|pid:none) Drosophila melanogaster chromoso... 42 2e-12 BT046590_1(BT046590|pid:none) Salmo salar clone ssal-evd-532-241... 53 4e-12 AF515525_1(AF515525|pid:none) Anopheles gambiae glutathione S-tr... 47 1e-11 BC056725_1(BC056725|pid:none) Danio rerio glutathione S-transfer... 44 4e-11 EU183359_1(EU183359|pid:none) Carassius auratus glutathione S-tr... 44 2e-10 BC055612_1(BC055612|pid:none) Danio rerio zgc:66350, mRNA (cDNA ... 49 3e-10 BC076690_1(BC076690|pid:none) Xenopus tropicalis glutathione S-t... 51 6e-10 BT045831_1(BT045831|pid:none) Salmo salar clone ssal-rgf-532-350... 53 1e-09 EU747062_1(EU747062|pid:none) Tigriopus japonicus glutathione S-... 37 4e-09 BC062201_1(BC062201|pid:none) Mus musculus glutathione S-transfe... 46 1e-08 AF508157_1(AF508157|pid:none) Mus musculus glutathione S-transfe... 46 1e-08 (Q4V8E6) RecName: Full=Glutathione S-transferase theta-4; ... 42 2e-08 (Q64471) RecName: Full=Glutathione S-transferase theta-1; ... 48 2e-08 (Q9D4P7) RecName: Full=Glutathione S-transferase theta-4; ... 43 2e-08 AC151526_23(AC151526|pid:none) Medicago truncatula clone mth2-78... 44 4e-08 BC012254_1(BC012254|pid:none) Mus musculus glutathione S-transfe... 47 4e-08 (Q2NL00) RecName: Full=Glutathione S-transferase theta-1; ... 48 7e-08 (A8MPT4) RecName: Full=Glutathione S-transferase theta-4; ... 47 9e-08 (Q01579) RecName: Full=Glutathione S-transferase theta-1; ... 47 2e-07 BT075089_1(BT075089|pid:none) Osmerus mordax clone omor-rgc-519-... 45 2e-07 BC129653_1(BC129653|pid:none) Xenopus laevis hypothetical protei... 44 4e-07 AY070932_1(AY070932|pid:none) Drosophila melanogaster RE03226 fu... 36 6e-07 BT032646_1(BT032646|pid:none) Drosophila melanogaster FI02803 fu... 35 8e-07 EF506487_1(EF506487|pid:none) Bombyx mori glutathione S-transfer... 41 8e-07 S44358(S44358;S14347) glutathione transferase (EC 2.5.1.18) thet... 44 9e-07 BT019951_1(BT019951|pid:none) Homo sapiens glutathione S-transfe... 44 9e-07 AY892557_1(AY892557|pid:none) Synthetic construct Homo sapiens c... 42 3e-06 BC007065_1(BC007065|pid:none) Homo sapiens glutathione S-transfe... 42 3e-06 AF448500_1(AF448500|pid:none) Nilaparvata lugens glutathione S-t... 51 3e-05 AF147206_1(AF147206|pid:none) Musca domestica glutathione s-tran... 48 3e-04 AY725219_1(AY725219|pid:none) Fundulus heteroclitus glutathione-... 37 4e-04 AE013599_2845(AE013599|pid:none) Drosophila melanogaster chromos... 47 6e-04 AJ132398_1(AJ132398|pid:none) Arabidopsis thaliana mRNA for glut... 46 0.001 AY139996_1(AY139996|pid:none) Arabidopsis thaliana glutathione t... 46 0.001 AB019225_3(AB019225|pid:none) Arabidopsis thaliana genomic DNA, ... 46 0.001 AF243378_1(AF243378|pid:none) Glycine max glutathione S-transfer... 46 0.001 AE013599_2843(AE013599|pid:none) Drosophila melanogaster chromos... 45 0.002 EF107106_11(EF107106|pid:none) Uncultured marine bacterium HF130... 32 0.002 AB176691_1(AB176691|pid:none) Bombyx mori GST delta mRNA for glu... 44 0.004 AF147205_1(AF147205|pid:none) Musca domestica glutathione S-tran... 43 0.009 AF402793_1(AF402793|pid:none) Oryza sativa (japonica cultivar-gr... 43 0.009 AM270372_6(AM270372|pid:none) Aspergillus niger contig An16c0200... 37 0.010 AF336288_1(AF336288|pid:none) Galleria mellonella glutathione-S-... 42 0.016 AY819710_1(AY819710|pid:none) Aedes aegypti glutathione S-transf... 42 0.016 (P30713) RecName: Full=Glutathione S-transferase theta-2; ... 42 0.027 FJ360741_1(FJ360741|pid:none) Cydia pomonella glutathione S-tran... 42 0.027 BT079968_1(BT079968|pid:none) Esox lucius clone eluc-evq-534-285... 42 0.027 AJ132355_1(AJ132355|pid:none) Polymyxa betae mRNA for glutathion... 42 0.027 AF316635_1(AF316635|pid:none) Anopheles gambiae glutathione S-tr... 41 0.035 AB019225_1(AB019225|pid:none) Arabidopsis thaliana genomic DNA, ... 41 0.035 AY730273_1(AY730273|pid:none) Anopheles culicifacies 720KH gluta... 41 0.046 AY651884_1(AY651884|pid:none) Anopheles culicifacies glutathione... 41 0.046 AY819709_1(AY819709|pid:none) Aedes aegypti glutathione S-transf... 40 0.059 AY829757_1(AY829757|pid:none) Lonomia obliqua hypothetical prote... 40 0.059 EF370473_1(EF370473|pid:none) Choristoneura fumiferana glutathio... 40 0.059 AF133268_1(AF133268|pid:none) Manduca sexta glutathione S-transf... 40 0.059 AL050257_1(AL050257|pid:none) Novel human mRNA mapping to chomos... 40 0.078 CR456929_1(CR456929|pid:none) Homo sapiens full open reading fra... 40 0.078 CR456374_1(CR456374|pid:none) Homo sapiens Em:AP000351.3 full le... 40 0.078 (Q52828) RecName: Full=Protein gstA; &X89816_2(X89816|pid:none) 40 0.078 AY624555_1(AY624555|pid:none) Anopheles fluviatilis strain 666KH... 40 0.078 AY754339_1(AY754339|pid:none) Anopheles fluviatilis strain 92IR ... 40 0.078 BC123200_1(BC123200|pid:none) Xenopus laevis hypothetical protei... 33 0.13 AE013599_2842(AE013599|pid:none) Drosophila melanogaster chromos... 39 0.13 CP000806_1175(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 39 0.13 CP001074_1352(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 39 0.13 U87958_1(U87958|pid:none) Culicoides variipennis glutathione S t... 39 0.13 CP000739_542(CP000739|pid:none) Sinorhizobium medicae WSM419 pla... 39 0.17 EF033109_1(EF033109|pid:none) Helicoverpa armigera glutathione S... 39 0.17 EZ000550_1(EZ000550|pid:none) TSA: Culex tarsalis Ctar-485 gluta... 39 0.17 AY573189_1(AY573189|pid:none) Anopheles stephensi glutathione S-... 39 0.23 AY754335_1(AY754335|pid:none) Anopheles stephensi strain 2IK II ... 39 0.23 AM260480_755(AM260480|pid:none) Ralstonia eutropha H16 chromosom... 39 0.23 CP000133_1260(CP000133|pid:none) Rhizobium etli CFN 42, complete... 39 0.23 AY255857_1(AY255857|pid:none) Anopheles gambiae glutathione tran... 39 0.23 AE016853_1995(AE016853|pid:none) Pseudomonas syringae pv. tomato... 38 0.30 AE013599_2841(AE013599|pid:none) Drosophila melanogaster chromos... 38 0.30 EU124621_1(EU124621|pid:none) Lutzomyia longipalpis putative glu... 38 0.39 CP001350_201(CP001350|pid:none) Methylobacterium nodulans ORS 20... 38 0.39 BT030973_1(BT030973|pid:none) Drosophila melanogaster IP20147 fu... 38 0.39 DQ315381_1(DQ315381|pid:none) Lygus lineolaris isolate LLS GST m... 38 0.39 (Q9VG98) RecName: Full=Glutathione S-transferase D2; Sh... 38 0.39 CU633750_588(CU633750|pid:none) Cupriavidus taiwanensis str. LMG... 38 0.39 CT573326_1207(CT573326|pid:none) Pseudomonas entomophila str. L4... 38 0.39 D46681(D46681)glutathione transferase (EC 2.5.1.18) D21 - fruit ... 38 0.39 AF316636_1(AF316636|pid:none) Anopheles gambiae glutathione S-tr... 37 0.50 AB041613_1(AB041613|pid:none) Mus musculus brain cDNA, clone MNC... 37 0.50 EF423869_1(EF423869|pid:none) Bombyx mori glutathione S-transfer... 37 0.50 (Q9VHD3) RecName: Full=Probable maleylacetoacetate isomerase 1; ... 37 0.50 AY231720_1(AY231720|pid:none) Drosophila yakuba clone yak-em_CG1... 37 0.50 AE014297_1540(AE014297|pid:none) Drosophila melanogaster chromos... 37 0.50 CP000949_2201(CP000949|pid:none) Pseudomonas putida W619, comple... 37 0.50 (Q9WVL0) RecName: Full=Maleylacetoacetate isomerase; Sh... 37 0.50 CP000155_3158(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 37 0.50 AE014297_1539(AE014297|pid:none) Drosophila melanogaster chromos... 37 0.50 DQ355374_1(DQ355374|pid:none) Bombyx mori glutathione S-transfer... 37 0.66 AM236080_1358(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 37 0.66 AY058242_1(AY058242|pid:none) Helicoverpa armigera glutathione-S... 37 0.86 BA000040_7418(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 37 0.86 DQ311182_1(DQ311182|pid:none) Bombyx mori glutathione S-transfer... 37 0.86 AE013599_2846(AE013599|pid:none) Drosophila melanogaster chromos... 37 0.86 (P28338) RecName: Full=Glutathione S-transferase 1; EC=... 36 1.1 CU234118_5658(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 36 1.1 AM260479_2591(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 27 1.3 CP000009_858(CP000009|pid:none) Gluconobacter oxydans 621H, comp... 36 1.5 CP000157_2638(CP000157|pid:none) Erythrobacter litoralis HTCC259... 36 1.5 AJ437579_1(AJ437579|pid:none) Drosophila melanogaster mRNA for p... 36 1.5 U48419_1(U48419|pid:none) Mus musculus theta class glutathione t... 36 1.5 AE014298_1990(AE014298|pid:none) Drosophila melanogaster chromos... 35 1.9 AE015451_3703(AE015451|pid:none) Pseudomonas putida KT2440 compl... 35 1.9 EU079432_1(EU079432|pid:none) Drosophila mojavensis strain MJBC1... 35 1.9 CP000949_1179(CP000949|pid:none) Pseudomonas putida W619, comple... 35 1.9 AY231871_1(AY231871|pid:none) Drosophila yakuba clone yak-em_CG1... 35 1.9 AF513636_1(AF513636|pid:none) Anopheles gambiae glutathione S-tr... 35 1.9 DQ355376_1(DQ355376|pid:none) Bombyx mori glutathione S-transfer... 35 1.9 X94285_1(X94285|pid:none) M.domestica nf10 gene. 35 1.9 BT012465_1(BT012465|pid:none) Drosophila melanogaster RE40740 fu... 35 1.9 AE013599_2838(AE013599|pid:none) Drosophila melanogaster chromos... 35 1.9 AE014297_577(AE014297|pid:none) Drosophila melanogaster chromoso... 35 1.9 CP000271_2061(CP000271|pid:none) Burkholderia xenovorans LB400 c... 35 2.5 AF515527_1(AF515527|pid:none) Anopheles gambiae glutathione S-tr... 35 2.5 EU079405_1(EU079405|pid:none) Drosophila mojavensis strain DE22 ... 35 2.5 EF207961_1(EF207961|pid:none) Heliconius melpomene glutathione-S... 35 2.5 EU079404_1(EU079404|pid:none) Drosophila mojavensis strain DE18 ... 35 2.5 EU079447_1(EU079447|pid:none) Drosophila arizonae strain ARNA22 ... 35 2.5 EU079381_1(EU079381|pid:none) Drosophila mojavensis strain ANZA1... 35 2.5 EU079426_1(EU079426|pid:none) Drosophila mojavensis strain MJBC1... 35 2.5 CP000830_833(CP000830|pid:none) Dinoroseobacter shibae DFL 12, c... 35 2.5 EU079444_1(EU079444|pid:none) Drosophila navojoa strain NAV10 gl... 35 2.5 EU079431_1(EU079431|pid:none) Drosophila mojavensis strain MJBC1... 35 2.5 AB443867_4(AB443867|pid:none) Culex quinquefasciatus CqGSTd1 gen... 35 2.5 (P42860) RecName: Full=Glutathione S-transferase 1-1; E... 35 2.5 CP001287_1340(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 35 2.5 L23126_1(L23126|pid:none) Lucilia cuprina glutathione S-transfer... 35 2.5 EU079443_1(EU079443|pid:none) Drosophila navojoa strain NAV1 glu... 35 2.5 AJ006502_1(AJ006502|pid:none) Bombyx mori mRNA for glutathione S... 35 2.5 EU079406_1(EU079406|pid:none) Drosophila mojavensis strain HE01 ... 35 2.5 EU079421_1(EU079421|pid:none) Drosophila mojavensis strain MJ68 ... 35 2.5 AL807366_5(AL807366|pid:none) Neurospora crassa DNA linkage grou... 35 2.5 EU079461_1(EU079461|pid:none) Drosophila arizonae strain CHI13 g... 35 2.5 AF053545_1(AF053545|pid:none) Homo sapiens glutathione transfera... 35 3.3 AF425746_1(AF425746|pid:none) Emericella nidulans theta class gl... 35 3.3 AK315154_1(AK315154|pid:none) Homo sapiens cDNA, FLJ96127, highl... 35 3.3 EF104259_1(EF104259|pid:none) Macaca fascicularis glutathione tr... 35 3.3 CP001344_301(CP001344|pid:none) Cyanothece sp. PCC 7425, complet... 35 3.3 AC007954_4(AC007954|pid:none) Homo sapiens chromosome 14 clone R... 35 3.3 CR382127_209(CR382127|pid:none) Yarrowia lipolytica strain CLIB1... 35 3.3 AP002972_13(AP002972|pid:none) Oryza sativa Japonica Group genom... 35 3.3 AB209360_1(AB209360|pid:none) Homo sapiens mRNA for Glutathione ... 35 3.3 CP001280_3460(CP001280|pid:none) Methylocella silvestris BL2, co... 27 3.5 CP000449_1981(CP000449|pid:none) Maricaulis maris MCS10, complet... 34 4.3 FN392320_521(FN392320|pid:none) Pichia pastoris GS115 chromosome... 34 4.3 BX572606_321(BX572606|pid:none) Rhodopseudomonas palustris CGA00... 34 4.3 CP000777_287(CP000777|pid:none) Leptospira biflexa serovar Patoc... 34 4.3 EF667043_1(EF667043|pid:none) Takifugu obscurus gluthathione S-t... 34 4.3 CP001096_4737(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 34 4.3 BT082353_1(BT082353|pid:none) Anoplopoma fimbria clone afim-evh-... 34 5.6 EU216542_1(EU216542|pid:none) Bombyx mori glutathione S-transfer... 34 5.6 (O77473) RecName: Full=Glutathione S-transferase 1, isoform B; ... 34 5.6 JQ1378(JQ1378;F46681)glutathione transferase (EC 2.5.1.18) D27 -... 34 5.6 CP000926_4222(CP000926|pid:none) Pseudomonas putida GB-1, comple... 34 5.6 CP000136_90(CP000136|pid:none) Rhizobium etli CFN 42 plasmid p42... 34 5.6 CP001191_901(CP001191|pid:none) Rhizobium leguminosarum bv. trif... 34 5.6 CP000362_3695(CP000362|pid:none) Roseobacter denitrificans OCh 1... 34 5.6 CP000316_1404(CP000316|pid:none) Polaromonas sp. JS666, complete... 33 7.2 CP000282_3817(CP000282|pid:none) Saccharophagus degradans 2-40, ... 33 7.3 CP000927_790(CP000927|pid:none) Caulobacter sp. K31, complete ge... 33 7.3 CP000158_50(CP000158|pid:none) Hyphomonas neptunium ATCC 15444, ... 33 7.3 AE013599_2847(AE013599|pid:none) Drosophila melanogaster chromos... 33 7.3 BT029414_1(BT029414|pid:none) Drosophila melanogaster IP02537 fu... 33 7.3 CR940348_255(CR940348|pid:none) Theileria annulata strain Ankara... 33 7.3 CP000075_1841(CP000075|pid:none) Pseudomonas syringae pv. syring... 33 7.3 CU459003_1657(CU459003|pid:none) Magnetospirillum gryphiswaldens... 33 7.3 EF506489_1(EF506489|pid:none) Bombyx mori glutathione S-transfer... 33 7.3 CP001103_4050(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 33 7.3 BC112582_1(BC112582|pid:none) Bos taurus glutathione transferase... 33 7.3 AY579747_1(AY579747|pid:none) Aedes aegypti glutathione S-transf... 33 7.3 S26843(S26843;S12697)site-specific DNA-methyltransferase (cytosi... 33 9.4 AF515521_1(AF515521|pid:none) Anopheles gambiae glutathione S-tr... 33 9.5 BC076329_1(BC076329|pid:none) Danio rerio zgc:92869, mRNA (cDNA ... 33 9.5 AE005673_1120(AE005673|pid:none) Caulobacter crescentus CB15, co... 33 9.5 (P27014) RecName: Full=S-crystallin 2; &S56759(S56759;S56761;S2... 33 9.5 BT024431_1(BT024431|pid:none) Drosophila melanogaster IP02541 fu... 33 9.5 C46681(C46681)glutathione transferase (EC 2.5.1.18) D24 - fruit ... 33 9.5 FJ851372_1(FJ851372|pid:none) Chironomus tentans glutathione S-t... 33 9.5 AB2377(AB2377) glutathione S-transferase [imported] - Nostoc sp.... 33 9.5 CP001340_1180(CP001340|pid:none) Caulobacter crescentus NA1000, ... 33 9.5 CP000133_1056(CP000133|pid:none) Rhizobium etli CFN 42, complete... 33 9.5 AE013599_810(AE013599|pid:none) Drosophila melanogaster chromoso... 33 9.5 CU640366_394(CU640366|pid:none) Podospora anserina genomic DNA c... 33 9.5
>AE013599_921(AE013599|pid:none) Drosophila melanogaster chromosome 2R, complete sequence. &AY070580_1(AY070580|pid:none) &FJ632642_1(FJ632642|pid:none) &FJ637349_1(FJ637349|pid:none) Length = 228
Score = 42.4 bits (98), Expect(3) = 2e-12 Identities = 24/59 (40%), Positives = 33/59 (55%) Frame = +1
Query: 37 MSDKIILYGDLISQPVRAVYWFLVFNKIDFELHEILLGKKEARTEEYKKINPLQKNASI 213 MS I Y D +SQP RA++ + K FE + L K+E T+EY+ IN QK +I Sbjct: 1 MSKAIKYYYDFLSQPSRALWIAMKLGKTPFEDCPVALRKQEQLTDEYRSINRFQKVPAI 59
Score = 42.4 bits (98), Expect(3) = 2e-12 Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 2/67 (2%) Frame = +3
Query: 219 IKAKFILSH-INILRFLSQEFNLN-QYYGETLLEKTKVDTYLDWMHLGIRAYSQSLFAQK 392 + KF L ++I+R+L+ + + Q Y +TL E+ +VD +L+W H +R F Q Sbjct: 60 VDGKFQLGESVSIVRYLADKGVFSEQLYPKTLEERARVDEFLEWQHFNVRLVCSLFFRQV 119
Query: 393 YLMPKFG 413 +L+P G Sbjct: 120 WLLPAKG 126
Score = 30.4 bits (67), Expect(3) = 2e-12 Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 4/69 (5%) Frame = +1
Query: 514 YIVGDRLTIADFSCYSELKQLEGIKYDFS--PYKAIENWKKQMESLDG--YKEANVKINQ 681 ++VGD+LT+AD SE+ Q++ +Y+ + + + W +++ Y EA+ + + Sbjct: 159 FLVGDKLTVADIFGSSEINQMKLCQYNVNEKQFPKVAKWMERVRDATNPYYDEAHSFVYK 218
Query: 682 LASQQ*K*K 708 + Q K K Sbjct: 219 TSQQAVKAK 227
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3204285 Number of Hits to DB: 950,231,832 Number of extensions: 16926900 Number of successful extensions: 42037 Number of sequences better than 10.0: 190 Number of HSP's gapped: 42026 Number of HSP's successfully gapped: 243 Length of query: 249 Length of database: 1,040,966,779 Length adjustment: 125 Effective length of query: 124 Effective length of database: 640,431,154 Effective search space: 79413463096 Effective search space used: 79413463096 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 31 (16.5 bits)
|
PSORT |
|
VS (DIR, S) |
7 |
VH (FL, L) |
0 |
VF (FL, S) |
1 |
AH (FL, L) |
0 |
AF (FL, S) |
0 |
SL (DIR, L) |
0 |
SS (DIR, S) |
0 |
SH (FL, L) |
0 |
SF (FL, S) |
0 |
CH (FL, L) |
0 |
CF (FL, S) |
0 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
0 |
FC-IC (SUB) |
0 |