Contig-U10415-1
Contig ID Contig-U10415-1
Contig update 2002. 9.13
Contig sequence
>Contig-U10415-1 (Contig-U10415-1Q) /CSM_Contig/Contig-U10415-1Q.Seq.d
AATATTAATTATAATAATAAAAAAAATGAATTATTTGGAAAATATCAACA
ACAACAACAACAACAACAAAGATTAAATTATTCAACACATGTTAAAGAGG
AAATGGGAGAAAATAAAAAAAAGACAGTTTTAGATATTTTAAAGAAATAT
AAAGATGGTATACCAATTTCAATGGTTACAGCATATGATTTTACAAGTTC
AAAGATAGTTGATAAATCAGGAATGGATATGATACTGGTGGGAGATTCAT
TAGGTATGGTTATGAATGGTGAGAGTGGTACAACATCAGTGACAATGGAA
CAAATGATTTATCATTGTAAATCAGTGATGAAAGGTAGTAAAAGGTCATT
TGTAGTTGGTGATATGCCATTCGGTAGTTATGAAACATCAACAAAAGATG
CGGTTTCAAATGCAATTCGTTTAATAAAGGAAGGTGGTGTTGATGCTATT
AAATTGGAAGGTGGTAAAAAACAATTTGAAAAGATTAAAGCAATTTGTGA
TACTGGTATATTGGTTGTCGGCCATATTGGTCTAACACCACAAACTTCAA
CTTCACTAGGTGGATTTAAATTACAGGGTAAAACCGAACAAGAAGCATTA
TCATTATTAGAGNACGCAAAATCATTACAAGAAGCAGGTTGTTTTGNTAT
TGTTTTANAAATGGTACCTCATGCAACCGCTGTGGCCATAACTAATACCC
TATCGATTCCAACCATTGGTATTGGTGCTGGTAATGGTACAAGTGGTCAA
GTTTTAGTTTATCATGATCTATTGGGACNATATTCAGATTTCGTCCCTAA
ATTTTGTAAACAATATGCAACACTATCAGAAAATATTGATCAATCTTTGA
AAAACTATAAAAATGAAGTTGAATCAANAGAATTTCCATCACCTACTCAT
TCTTTCTCAATGANAGAATCTGAATTATCACCATTTTTAGAATAAAAATT
ATAA

Gap no gap
Contig length 954
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 4743710
End point 4742756
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 1
Link to clone list U10415
List of clone(s)

est1=VFI167E,1,955
Translated Amino Acid sequence
NINYNNKKNELFGKYQQQQQQQQRLNYSTHVKEEMGENKKKTVLDILKKYKDGIPISMVT
AYDFTSSKIVDKSGMDMILVGDSLGMVMNGESGTTSVTMEQMIYHCKSVMKGSKRSFVVG
DMPFGSYETSTKDAVSNAIRLIKEGGVDAIKLEGGKKQFEKIKAICDTGILVVGHIGLTP
QTSTSLGGFKLQGKTEQEALSLLEXAKSLQEAGCFXIVLXMVPHATAVAITNTLSIPTIG
IGAGNGTSGQVLVYHDLLGXYSDFVPKFCKQYATLSENIDQSLKNYKNEVESXEFPSPTH
SFSMXESELSPFLE*kl*


Translated Amino Acid sequence (All Frames)
Frame A:
NINYNNKKNELFGKYQQQQQQQQRLNYSTHVKEEMGENKKKTVLDILKKYKDGIPISMVT
AYDFTSSKIVDKSGMDMILVGDSLGMVMNGESGTTSVTMEQMIYHCKSVMKGSKRSFVVG
DMPFGSYETSTKDAVSNAIRLIKEGGVDAIKLEGGKKQFEKIKAICDTGILVVGHIGLTP
QTSTSLGGFKLQGKTEQEALSLLEXAKSLQEAGCFXIVLXMVPHATAVAITNTLSIPTIG
IGAGNGTSGQVLVYHDLLGXYSDFVPKFCKQYATLSENIDQSLKNYKNEVESXEFPSPTH
SFSMXESELSPFLE*kl*


Frame B:
iliiiikkmnyleninnnnnnnkd*iiqhmlkrkwekikkrqf*if*rnikmvyqfqwlq
hmilqvqr*linqewi*ywweih*vwl*mvrvvqhq*qwnk*fiivnq**kvvkghl*lv
ichsvvmkhqqkmrfqmqfv**rkvvlmllnwkvvknnlkrlkqfvilvywlsailv*hh
klqlh*vdlnyrvkpnkkhyhy*xtqnhykkqvvlxlfxkwylmqplwp*lipyrfqplv
lvlvmvqvvkf*fimiywdxiqisslnfvnnmqhyqkilinl*ktikmklnqxnfhhlli
lsq*xnlnyhhf*nkny


Frame C:
y*l***kk*iiwkistttttttkiklfntc*rgngrk*kkdsfryfkei*rwytnfngys
i*fykfkds**irngydtggrfirygyew*ewynisdngtndlsl*isder**kvicsw*
yair*l*ninkrcgfkcnsfnkgrwc*cy*igrw*kti*kd*snl*ywyigcrpywsntt
nfnftrwi*itg*nrtrsiiiirxrkiitrsrlfxycfxngtscnrcghn*ypidsnhwy
wcw*wykwssfsls*sigtifrfrp*il*ticntirky*sifekl*k*s*ixrisitysf
flnxri*iitifrikii


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U10415-1 (Contig-U10415-1Q)
/CSM_Contig/Contig-U10415-1Q.Seq.d
(954 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U10415-1 (Contig-U10415-1Q) /CSM_Contig/Conti... 1671 0.0
Contig-U13062-1 (Contig-U13062-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U12128-1 (Contig-U12128-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U11697-1 (Contig-U11697-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U01332-1 (Contig-U01332-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U14806-1 (Contig-U14806-1Q) /CSM_Contig/Conti... 38 0.017
Contig-U09597-1 (Contig-U09597-1Q) /CSM_Contig/Conti... 38 0.017
Contig-U10373-1 (Contig-U10373-1Q) /CSM_Contig/Conti... 36 0.067
Contig-U04014-1 (Contig-U04014-1Q) /CSM_Contig/Conti... 36 0.067
Contig-U14471-1 (Contig-U14471-1Q) /CSM_Contig/Conti... 34 0.27

>Contig-U10415-1 (Contig-U10415-1Q) /CSM_Contig/Contig-U10415-1Q.Seq.d
Length = 954

Score = 1671 bits (843), Expect = 0.0
Identities = 877/885 (99%)
Strand = Plus / Plus


Query: 70 agattaaattattcaacacatgttaaagaggaaatgggagaaaatnnnnnnnngacagtt 129
||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 70 agattaaattattcaacacatgttaaagaggaaatgggagaaaataaaaaaaagacagtt 129


Query: 130 ttagatattttaaagaaatataaagatggtataccaatttcaatggttacagcatatgat 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ttagatattttaaagaaatataaagatggtataccaatttcaatggttacagcatatgat 189


Query: 190 tttacaagttcaaagatagttgataaatcaggaatggatatgatactggtgggagattca 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tttacaagttcaaagatagttgataaatcaggaatggatatgatactggtgggagattca 249


Query: 250 ttaggtatggttatgaatggtgagagtggtacaacatcagtgacaatggaacaaatgatt 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttaggtatggttatgaatggtgagagtggtacaacatcagtgacaatggaacaaatgatt 309


Query: 310 tatcattgtaaatcagtgatgaaaggtagtaaaaggtcatttgtagttggtgatatgcca 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tatcattgtaaatcagtgatgaaaggtagtaaaaggtcatttgtagttggtgatatgcca 369


Query: 370 ttcggtagttatgaaacatcaacaaaagatgcggtttcaaatgcaattcgtttaataaag 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ttcggtagttatgaaacatcaacaaaagatgcggtttcaaatgcaattcgtttaataaag 429


Query: 430 gaaggtggtgttgatgctattaaattggaaggtggtaaaaaacaatttgaaaagattaaa 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gaaggtggtgttgatgctattaaattggaaggtggtaaaaaacaatttgaaaagattaaa 489


Query: 490 gcaatttgtgatactggtatattggttgtcggccatattggtctaacaccacaaacttca 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gcaatttgtgatactggtatattggttgtcggccatattggtctaacaccacaaacttca 549


Query: 550 acttcactaggtggatttaaattacagggtaaaaccgaacaagaagcattatcattatta 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 acttcactaggtggatttaaattacagggtaaaaccgaacaagaagcattatcattatta 609


Query: 610 gagnacgcaaaatcattacaagaagcaggttgttttgntattgttttanaaatggtacct 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gagnacgcaaaatcattacaagaagcaggttgttttgntattgttttanaaatggtacct 669


Query: 670 catgcaaccgctgtggccataactaataccctatcgattccaaccattggtattggtgct 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 catgcaaccgctgtggccataactaataccctatcgattccaaccattggtattggtgct 729


Query: 730 ggtaatggtacaagtggtcaagttttagtttatcatgatctattgggacnatattcagat 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ggtaatggtacaagtggtcaagttttagtttatcatgatctattgggacnatattcagat 789


Query: 790 ttcgtccctaaattttgtaaacaatatgcaacactatcagaaaatattgatcaatctttg 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 ttcgtccctaaattttgtaaacaatatgcaacactatcagaaaatattgatcaatctttg 849


Query: 850 aaaaactataaaaatgaagttgaatcaanagaatttccatcacctactcattctttctca 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 aaaaactataaaaatgaagttgaatcaanagaatttccatcacctactcattctttctca 909


Query: 910 atganagaatctgaattatcaccatttttagaataaaaattataa 954
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 atganagaatctgaattatcaccatttttagaataaaaattataa 954


Score = 42.1 bits (21), Expect = 0.001
Identities = 37/45 (82%)
Strand = Plus / Plus


Query: 1 aatattaattataataatnnnnnnnntgaattatttggaaaatat 45
|||||||||||||||||| |||||||||||||||||||
Sbjct: 1 aatattaattataataataaaaaaaatgaattatttggaaaatat 45


>Contig-U13062-1 (Contig-U13062-1Q) /CSM_Contig/Contig-U13062-1Q.Seq.d
Length = 655

Score = 40.1 bits (20), Expect = 0.004
Identities = 20/20 (100%)
Strand = Plus / Minus


Query: 917 aatctgaattatcaccattt 936
||||||||||||||||||||
Sbjct: 456 aatctgaattatcaccattt 437


>Contig-U12128-1 (Contig-U12128-1Q) /CSM_Contig/Contig-U12128-1Q.Seq.d
Length = 2238

Score = 40.1 bits (20), Expect = 0.004
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 587 aacaagaagcattatcatta 606
||||||||||||||||||||
Sbjct: 788 aacaagaagcattatcatta 807


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,108
Number of Sequences: 6905
Number of extensions: 13108
Number of successful extensions: 1618
Number of sequences better than 10.0: 169
length of query: 954
length of database: 5,674,871
effective HSP length: 16
effective length of query: 938
effective length of database: 5,564,391
effective search space: 5219398758
effective search space used: 5219398758
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.20
Homology vs DNA
Query= Contig-U10415-1 (Contig-U10415-1Q) /CSM_Contig/Contig-U10415-1Q.Seq.d
(954 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ432079) Dictyostelium discoideum cDNA clone:ddv17e17, 3' ... 1320 0.0 1
(BJ413963) Dictyostelium discoideum cDNA clone:ddv17e17, 5' ... 799 0.0 4
(EK587085) 1095522117106 Global-Ocean-Sampling_GS-32-01-01-1... 40 1e-05 4
(AL407653) T3 end of clone AV0AA003F05 of library AV0AA from... 58 6e-05 2
(DJ374691) Identification of Essential Genes in Prokaryotes. 46 7e-04 2
(DJ377427) Identification of Essential Genes in Prokaryotes. 46 7e-04 2
(DD121238) STAPHYLOCOCCUS AUREUS PROTEINS AND NUCLEIC ACIDS. 46 7e-04 2
(CS711249) Sequence 3789 from Patent EP1829892. 46 7e-04 2
(AX620826) Sequence 3789 from Patent WO02094868. 46 7e-04 2
(AR535612) Sequence 174 from patent US 6737248. 46 0.004 2
(AR354056) Sequence 174 from patent US 6593114. 46 0.004 2
(AB006706) Arabidopsis thaliana genomic DNA, chromosome 5, P... 42 0.007 2
(BX655336) Arabidopsis thaliana T-DNA flanking sequence GK-5... 42 0.009 2
(BX655337) Arabidopsis thaliana T-DNA flanking sequence GK-5... 42 0.009 2
(BZ764673) SALK_126096.54.50.x Arabidopsis thaliana TDNA ins... 42 0.009 2
(BH852088) SALK_074155.55.00.x Arabidopsis thaliana TDNA ins... 42 0.009 2
(BH852082) SALK_074146.39.75.x Arabidopsis thaliana TDNA ins... 42 0.009 2
(EL569791) Physarum04563 Physarum polycephalum starvation st... 48 0.010 2
(EJ544276) 1092955419810 Global-Ocean-Sampling_GS-29-01-01-1... 54 0.010 1
(FG563076) BN18DYSC_UP_121_A12_1APR2008_096 BN18DYSC Brassic... 42 0.032 2
(EX815789) CBNA4710.rev CBNA Phycomyces blakesleeanus NRRL15... 48 0.034 2
(EX815790) CBNA4710.fwd CBNA Phycomyces blakesleeanus NRRL15... 48 0.035 2
(BE205619) API87 NPI Onion cDNA library Allium cepa cDNA clo... 52 0.039 1
(DE283800) Bombyx mori genomic DNA, BAC clone:BES_001_G15. 40 0.12 2
(AQ900425) HS_2163_B1_H03_T7 CIT Approved Human Genomic Sper... 50 0.16 1
(EJ179777) 1092344115351 Global-Ocean-Sampling_GS-27-01-01-1... 50 0.16 1
(EJ133096) 1092343575640 Global-Ocean-Sampling_GS-27-01-01-1... 50 0.16 1
(EJ666047) 1092955041930 Global-Ocean-Sampling_GS-30-02-01-1... 44 0.16 2
(EK033223) 1092956240009 Global-Ocean-Sampling_GS-31-01-01-1... 44 0.16 2
(AY923838) Campylobacter jejuni subsp. jejuni 81-176 IlvE (i... 42 0.17 2
(EJ261410) 1095349041640 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.61 1
(CP000724) Alkaliphilus metalliredigens QYMF, complete genome. 48 0.61 1
(AC193349) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB... 32 1.3 2
(DX553135) GH_MBb0012E14r GH_MBb Gossypium hirsutum genomic ... 40 1.6 2
(CN584350) USDA-FP_127418 Acyrthosiphon pisum, Pea Aphid Acy... 32 1.7 2
(DT733391) EST1167241 Aquilegia cDNA library Aquilegia formo... 38 1.9 2
(DW100870) CLPZ3569.b1_B05.ab1 CLP(XYZ) lettuce perennis Lac... 38 2.0 2
(AL929351) Plasmodium falciparum strain 3D7, chromosome 5, s... 38 2.1 8
(DR937597) EST1129136 Aquilegia cDNA library Aquilegia formo... 38 2.1 2
(DR922065) EST1113604 Aquilegia cDNA library Aquilegia formo... 38 2.1 2
(DT749378) EST1183227 Aquilegia cDNA library Aquilegia formo... 38 2.1 2
(DT749379) EST1183228 Aquilegia cDNA library Aquilegia formo... 38 2.1 2
(DR929128) EST1120667 Aquilegia cDNA library Aquilegia formo... 38 2.1 2
(DR929127) EST1120666 Aquilegia cDNA library Aquilegia formo... 38 2.2 2
(DR937596) EST1129135 Aquilegia cDNA library Aquilegia formo... 38 2.2 2
(BV594433) S215P6981RD5.T0 Clara Pan troglodytes troglodytes... 46 2.4 1
(AC192944) Pan troglodytes BAC clone CH251-66D1 from chromos... 46 2.4 1
(AC189856) Pongo abelii chromosome UNK clone CH276-58H12, co... 46 2.4 1
(AC189705) Callithrix jacchus BAC clone CH259-70H12 from chr... 46 2.4 1
(AC166599) Nomascus leucogenys leucogenys clone CH271-207K21... 46 2.4 1
(AC165378) Colobus guereza clone CH272-371N6, complete seque... 46 2.4 1
(AC148186) Saimiri boliviensis boliviensis clone CH254-359M1... 46 2.4 1
(AC145355) Gorilla gorilla gorilla clone CH255-85N7, complet... 46 2.4 1
(AC144752) Pan troglodytes clone CH251-65N5, complete sequence. 46 2.4 1
(AC139111) Chlorocebus aethiops clone CH252-256L19, complete... 46 2.4 1
(AC138729) Pongo abelii clone CH253-321H12, complete sequence. 46 2.4 1
(AC124159) Macaca mulatta clone CH250-392A16, complete seque... 46 2.4 1
(AP006494) Cyanidioschyzon merolae DNA, chromosome 12, compl... 46 2.4 1
(AC127020) Medicago truncatula chromosome 6 clone mth2-9p1, ... 46 2.4 1
(DJ377731) Identification of Essential Genes in Prokaryotes. 46 2.4 1
(AC188703) Pan troglodytes chromosome 7 clone CH251-349M15, ... 46 2.4 1
(AC184036) Ateles geoffroyi clone UC1-264K15, WORKING DRAFT ... 46 2.4 1
(FI096970) MUGQ_CH252P472E19Sp6_CH0146_076 CHORI-252 Vervet ... 46 2.4 1
(ET215590) MUGQ_CH252P418N14Sp6_CP801_051 CHORI-252 Vervet M... 46 2.4 1
(ER537752) 1093015875960 Global-Ocean-Sampling_GS-35-01-01-1... 46 2.4 1
(EJ390731) 1092963923383 Global-Ocean-Sampling_GS-28-01-01-1... 46 2.4 1
(ED141648) AUAC-aai55d09.b1 Ascaris suum whole genome shotgu... 46 2.4 1
(ED061137) AUAC-aaj44b06.g1 Ascaris suum whole genome shotgu... 46 2.4 1
(FC816107) Sr_pAMT7_05c07_T7 S. ratti mixed stage pAMP Stron... 46 2.4 1
(CP000768) Campylobacter jejuni subsp. doylei 269.97, comple... 46 2.4 1
(CP000736) Staphylococcus aureus subsp. aureus JH1, complete... 46 2.4 1
(CP000730) Staphylococcus aureus subsp. aureus USA300_TCH151... 46 2.4 1
(CP000703) Staphylococcus aureus subsp. aureus JH9, complete... 46 2.4 1
(CP000255) Staphylococcus aureus subsp. aureus USA300_FPR375... 46 2.4 1
(CP000253) Staphylococcus aureus subsp. aureus NCTC 8325, co... 46 2.4 1
(CP000046) Staphylococcus aureus subsp. aureus COL, complete... 46 2.4 1
(CP000025) Campylobacter jejuni RM1221, complete genome. 46 2.4 1
(BX571857) Staphylococcus aureus strain MSSA476, complete ge... 46 2.4 1
(BX571856) Staphylococcus aureus subsp. aureus strain MRSA25... 46 2.4 1
(BA000033) Staphylococcus aureus subsp. aureus MW2 DNA, comp... 46 2.4 1
(BA000018) Staphylococcus aureus subsp. aureus N315 DNA, com... 46 2.4 1
(BA000017) Staphylococcus aureus subsp. aureus Mu50 DNA, com... 46 2.4 1
(AP009351) Staphylococcus aureus subsp. aureus str. Newman D... 46 2.4 1
(AP009324) Staphylococcus aureus subsp. aureus Mu3 DNA, comp... 46 2.4 1
(AJ938182) Staphylococcus aureus RF122 complete genome. 46 2.4 1
(AC074026) Staphylococcus aureus clone sabac-16, complete se... 46 2.4 1
(EJ730975) 1092960137327 Global-Ocean-Sampling_GS-30-02-01-1... 34 3.7 3
(EJ683922) 1092955160451 Global-Ocean-Sampling_GS-30-02-01-1... 34 3.8 3
(CP000361) Arcobacter butzleri RM4018, complete genome. 34 3.8 2
(CP001080) Sulfurihydrogenibium sp. YO3AOP1, complete genome. 34 3.9 2
(CU855590) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 4.4 6
(AC220683) Bos taurus clone CH240-349K16, WORKING DRAFT SEQU... 32 4.6 2
(BB921797) Trifolium pratense cDNA clone:RCE28017. 40 5.2 2
(FD962165) RR1FZ77TF RR1(CS) Raphanus raphanistrum subsp. ma... 34 5.8 3
(AC201025) Strongylocentrotus purpuratus clone R3-12I14, WOR... 36 5.9 4
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 36 6.0 19
(EV531983) RR1B279JQ RR1(CS) Raphanus raphanistrum subsp. ma... 34 6.1 2
(EV530478) RR1AG59JQ RR1(CS) Raphanus raphanistrum subsp. ma... 34 6.1 2
(EY929466) RS1CZ90TF RS1(AR) Raphanus sativus var. oleiformi... 34 6.2 2
(EY925887) RS1CZ90JQ RS1(AR) Raphanus sativus var. oleiformi... 34 6.2 2

>(BJ432079) Dictyostelium discoideum cDNA clone:ddv17e17, 3' end,
single read.
Length = 694

Score = 1320 bits (666), Expect = 0.0
Identities = 690/693 (99%)
Strand = Plus / Minus


Query: 262 atgaatggtgagagtggtacaacatcagtgacaatggaacaaatgatttatcattgtaaa 321
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 694 atgaatggtgagagtggtacaacatcagtgncaatggaacaaatgatttatcattgtaaa 635


Query: 322 tcagtgatgaaaggtagtaaaaggtcatttgtagttggtgatatgccattcggtagttat 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tcagtgatgaaaggtagtaaaaggtcatttgtagttggtgatatgccattcggtagttat 575


Query: 382 gaaacatcaacaaaagatgcggtttcaaatgcaattcgtttaataaaggaaggtggtgtt 441
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 gaancatcaacaaaagatncggtttcaaatgcaattcgtttaataaaggaaggtggtgtt 515


Query: 442 gatgctattaaattggaaggtggtaaaaaacaatttgaaaagattaaagcaatttgtgat 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gatgctattaaattggaaggtggtaaaaaacaatttgaaaagattaaagcaatttgtgat 455


Query: 502 actggtatattggttgtcggccatattggtctaacaccacaaacttcaacttcactaggt 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 actggtatattggttgtcggccatattggtctaacaccacaaacttcaacttcactaggt 395


Query: 562 ggatttaaattacagggtaaaaccgaacaagaagcattatcattattagagnacgcaaaa 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ggatttaaattacagggtaaaaccgaacaagaagcattatcattattagagnacgcaaaa 335


Query: 622 tcattacaagaagcaggttgttttgntattgttttanaaatggtacctcatgcaaccgct 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tcattacaagaagcaggttgttttgntattgttttanaaatggtacctcatgcaaccgct 275


Query: 682 gtggccataactaataccctatcgattccaaccattggtattggtgctggtaatggtaca 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gtggccataactaataccctatcgattccaaccattggtattggtgctggtaatggtaca 215


Query: 742 agtggtcaagttttagtttatcatgatctattgggacnatattcagatttcgtccctaaa 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 agtggtcaagttttagtttatcatgatctattgggacnatattcagatttcgtccctaaa 155


Query: 802 ttttgtaaacaatatgcaacactatcagaaaatattgatcaatctttgaaaaactataaa 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 ttttgtaaacaatatgcaacactatcagaaaatattgatcaatctttgaaaaactataaa 95


Query: 862 aatgaagttgaatcaanagaatttccatcacctactcattctttctcaatganagaatct 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 aatgaagttgaatcaanagaatttccatcacctactcattctttctcaatganagaatct 35


Query: 922 gaattatcaccatttttagaataaaaattataa 954
|||||||||||||||||||||||||||||||||
Sbjct: 34 gaattatcaccatttttagaataaaaattataa 2

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,060,579,166
Number of extensions: 63738124
Number of successful extensions: 5319055
Number of sequences better than 10.0: 137
Length of query: 954
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 930
Effective length of database: 97,308,875,965
Effective search space: 90497254647450
Effective search space used: 90497254647450
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.27
Homology vs Protein
Query= Contig-U10415-1 (Contig-U10415-1Q) /CSM_Contig/Contig-U10415-1Q.Seq.d
(954 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

CP001078_1601(CP001078|pid:none) Clostridium botulinum E3 str. A... 265 2e-69
AL132962_13(AL132962|pid:none) Arabidopsis thaliana DNA chromoso... 261 2e-68
GN128072_1(GN128072|pid:none) Sequence 10968 from Patent WO20090... 258 2e-67
AP002900_4(AP002900|pid:none) Oryza sativa Japonica Group genomi... 258 2e-67
AM920427_804(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 258 2e-67
CP001147_271(CP001147|pid:none) Thermodesulfovibrio yellowstonii... 253 7e-66
CP001197_2924(CP001197|pid:none) Desulfovibrio vulgaris str. 'Mi... 253 9e-66
CP001329_201(CP001329|pid:none) Micromonas sp. RCC299 chromosome... 251 2e-65
EU965724_1(EU965724|pid:none) Zea mays clone 288295 3-methyl-2-o... 251 3e-65
(A0PXQ3) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 251 3e-65
BT040400_1(BT040400|pid:none) Zea mays full-length cDNA clone ZM... 251 3e-65
AP002900_3(AP002900|pid:none) Oryza sativa Japonica Group genomi... 250 6e-65
(Q6AJ44) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 249 7e-65
GN128212_1(GN128212|pid:none) Sequence 11108 from Patent WO20090... 249 1e-64
CP001348_1749(CP001348|pid:none) Clostridium cellulolyticum H10,... 248 2e-64
CR382128_757(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 248 2e-64
AP009389_220(AP009389|pid:none) Pelotomaculum thermopropionicum ... 248 3e-64
CU633895_359(CU633895|pid:none) Podospora anserina genomic DNA c... 248 3e-64
(A3DDV7) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 247 5e-64
(A1VBJ4) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 247 5e-64
CP000860_99(CP000860|pid:none) Candidatus Desulforudis audaxviat... 246 6e-64
(Q833S5) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 246 6e-64
(Q3A9L0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 245 1e-63
GN128074_1(GN128074|pid:none) Sequence 10970 from Patent WO20090... 244 2e-63
(Q65I56) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 244 3e-63
AP009049_564(AP009049|pid:none) Clostridium kluyveri NBRC 12016 ... 244 4e-63
(A5N5W0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 244 4e-63
FJ599664_2(FJ599664|pid:none) Transformation vector pOKE104, com... 243 9e-63
EF106972_17(EF106972|pid:none) Uncultured marine Nitrospinaceae ... 242 2e-62
(A0LLW3) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 241 2e-62
AP008955_2502(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 240 5e-62
(Q97F39) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 239 1e-61
(A7GAI6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 239 1e-61
(A4IQ61) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 239 1e-61
(Q3A3I6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 237 5e-61
(P52996) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 235 1e-60
(A8A9H3) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 235 1e-60
(Q3Z8B4) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 235 2e-60
AP007151_252(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 234 2e-60
(B8FFR9) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 234 2e-60
(A0RBZ2) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 234 3e-60
(Q2LTJ5) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 234 3e-60
(B7HL53) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 234 3e-60
CP000252_1523(CP000252|pid:none) Syntrophus aciditrophicus SB, c... 234 3e-60
(B7HHU3) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 234 3e-60
EF191496_2(EF191496|pid:none) Bacillus subtilis strain 23 pantot... 233 6e-60
(A6TMH9) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 233 6e-60
(Q73AV4) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 233 7e-60
EF191503_2(EF191503|pid:none) Bacillus subtilis strain MU8U5U1 p... 233 9e-60
AM920431_1000(AM920431|pid:none) Penicillium chrysogenum Wiscons... 232 1e-59
(A0M360) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 232 2e-59
CP001124_2982(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 232 2e-59
(Q3ZXG0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 231 2e-59
GN128190_1(GN128190|pid:none) Sequence 11086 from Patent WO20090... 231 2e-59
CP001229_1356(CP001229|pid:none) Sulfurihydrogenibium azorense A... 231 3e-59
FM992688_43(FM992688|pid:none) Candida dubliniensis CD36 chromos... 231 3e-59
(A7GN76) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 229 1e-58
(Q74CG8) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 229 1e-58
(Q5JCY6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 228 3e-58
GN128086_1(GN128086|pid:none) Sequence 10982 from Patent WO20090... 228 3e-58
CP001336_376(CP001336|pid:none) Desulfitobacterium hafniense DCB... 228 3e-58
GN128136_1(GN128136|pid:none) Sequence 11032 from Patent WO20090... 228 3e-58
GN128178_1(GN128178|pid:none) Sequence 11074 from Patent WO20090... 228 3e-58
(Q7MWM0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 227 4e-58
CP000227_1507(CP000227|pid:none) Bacillus cereus Q1, complete ge... 227 5e-58
GN128138_1(GN128138|pid:none) Sequence 11034 from Patent WO20090... 227 5e-58
(A9WFR7) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 226 9e-58
(A1AUV8) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 226 9e-58
(A7HGZ2) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 226 1e-57
(A2SDV6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 225 2e-57
(A5FAQ5) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 225 2e-57
(A5G3A0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 224 3e-57
AM398681_866(AM398681|pid:none) Flavobacterium psychrophilum JIP... 224 3e-57
CP001337_2824(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 224 3e-57
CP001080_926(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1... 224 3e-57
(A6LA68) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 224 4e-57
(Q250S5) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 223 7e-57
CU207366_2064(CU207366|pid:none) Gramella forsetii KT0803 comple... 223 1e-56
(Q5HWH3) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 222 1e-56
(A8FK87) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 222 2e-56
(A7H574) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 221 3e-56
GN128166_1(GN128166|pid:none) Sequence 11062 from Patent WO20090... 221 4e-56
(B6YS36) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 220 6e-56
(Q29W37) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 220 6e-56
GN128164_1(GN128164|pid:none) Sequence 11060 from Patent WO20090... 220 6e-56
CP000916_926(CP000916|pid:none) Thermotoga neapolitana DSM 4359,... 219 8e-56
(Q2S1H6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 218 2e-55
(O58665) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 218 2e-55
CR382139_404(CR382139|pid:none) Debaryomyces hansenii strain CBS... 218 2e-55
(Q8U1R2) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 218 2e-55
CP000969_1081(CP000969|pid:none) Thermotoga sp. RQ2, complete ge... 217 4e-55
(A0L3M6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 217 5e-55
CP001089_941(CP001089|pid:none) Geobacter lovleyi SZ, complete g... 216 7e-55
(Q5WGA3) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 216 7e-55
(Q72LM0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 215 2e-54
(Q5SL86) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 214 3e-54
(Q71YB3) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 214 5e-54
(Q2IFU2) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 214 5e-54
CP001359_3786(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 214 5e-54
(Q9KC87) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 213 6e-54
CP001131_3708(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 213 6e-54
AM398681_1529(AM398681|pid:none) Flavobacterium psychrophilum JI... 213 6e-54
CP000702_1012(CP000702|pid:none) Thermotoga petrophila RKU-1, co... 213 8e-54
(P38122) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 213 8e-54
(Q30PX5) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 213 8e-54
(A0RXQ5) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 213 1e-53
CP001615_2994(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 213 1e-53
CP000771_1187(CP000771|pid:none) Fervidobacterium nodosum Rt17-B... 212 1e-53
(Q8KCS2) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 212 2e-53
(A1BH02) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 212 2e-53
CP001393_1902(CP001393|pid:none) Anaerocellum thermophilum DSM 6... 212 2e-53
CP001351_242(CP001351|pid:none) Methylobacterium nodulans ORS 20... 211 3e-53
(Q8A9W7) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 211 4e-53
AP009493_5253(AP009493|pid:none) Streptomyces griseus subsp. gri... 211 4e-53
(A7GZP8) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 209 1e-52
CP001097_1468(CP001097|pid:none) Chlorobium limicola DSM 245, co... 209 1e-52
(O67783) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 209 1e-52
(Q07LA4) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 209 1e-52
(Q11Q55) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 209 1e-52
GN128042_1(GN128042|pid:none) Sequence 10938 from Patent WO20090... 208 2e-52
(Q974Y0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 208 2e-52
AY967061_1(AY967061|pid:none) Synthetic construct isolate FTT138... 207 3e-52
CP001103_3522(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 207 4e-52
(B7IDK8) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 207 6e-52
CP000437_562(CP000437|pid:none) Francisella tularensis subsp. ho... 207 6e-52
CP001099_802(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ... 207 6e-52
CP001399_223(CP001399|pid:none) Sulfolobus islandicus L.S.2.15, ... 206 7e-52
(Q9RR81) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 206 7e-52
AE000513_2559(AE000513|pid:none) Deinococcus radiodurans R1 chro... 206 7e-52
(A3PGQ2) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 206 9e-52
CP001150_55(CP001150|pid:none) Rhodobacter sphaeroides KD131 chr... 206 9e-52
(A6LMK5) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 206 1e-51
(Q04XX5) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 206 1e-51
(Q8ZT69) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 206 1e-51
(A3DPB2) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 206 1e-51
(Q1GLQ6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 206 1e-51
(Q0ADS2) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 205 2e-51
AE017350_38(AE017350|pid:none) Cryptococcus neoformans var. neof... 205 2e-51
(Q2YAN9) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 205 2e-51
(Q72MN0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 204 3e-51
(Q215V6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 204 3e-51
(A1US40) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 204 5e-51
(Q3ILK1) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 204 5e-51
CP001140_338(CP001140|pid:none) Desulfurococcus kamchatkensis 12... 204 5e-51
(Q6G5H3) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 204 5e-51
FN392321_1039(FN392321|pid:none) Pichia pastoris GS115 chromosom... 203 6e-51
CP001276_784(CP001276|pid:none) Thermomicrobium roseum DSM 5159 ... 203 8e-51
(A0JVB5) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 203 8e-51
CP000781_1431(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 202 1e-50
(Q14GL1) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 202 1e-50
(Q47R98) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 202 1e-50
(Q2IXB0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 202 1e-50
BA000035_116(BA000035|pid:none) Corynebacterium efficiens YS-314... 201 2e-50
(Q8FUA5) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 201 2e-50
CP001358_75(CP001358|pid:none) Desulfovibrio desulfuricans subsp... 201 3e-50
CP001029_1706(CP001029|pid:none) Methylobacterium populi BJ001, ... 201 3e-50
(Q135K5) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 201 3e-50
GN128174_1(GN128174|pid:none) Sequence 11070 from Patent WO20090... 201 3e-50
(B6JGY0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 201 4e-50
(Q0C444) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 200 5e-50
AP009179_2097(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic ... 200 5e-50
CU928178_639(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 200 5e-50
GN128204_1(GN128204|pid:none) Sequence 11100 from Patent WO20090... 200 5e-50
(A0Q7L2) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 200 7e-50
(Q6AFH4) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 200 7e-50
(Q7UM39) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 200 7e-50
(Q82Y18) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 199 9e-50
(Q83EA2) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 199 1e-49
CP000890_456(CP000890|pid:none) Coxiella burnetii RSA 331, compl... 199 1e-49
(Q9RKS2) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 199 2e-49
(Q6N583) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 199 2e-49
(B1YBD4) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 199 2e-49
CP000494_3544(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 199 2e-49
(Q5QVR5) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 198 2e-49
(Q11F82) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 198 2e-49
(A4WVH0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 198 2e-49
(B6J1Q3) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 198 2e-49
(Q97W44) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 198 2e-49
(A7ZEL6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 198 3e-49
(Q9A7R9) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 197 3e-49
GN128146_1(GN128146|pid:none) Sequence 11042 from Patent WO20090... 197 4e-49
(Q5X1M8) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 197 4e-49
(B1YHQ9) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 197 4e-49
GN128132_1(GN128132|pid:none) Sequence 11028 from Patent WO20090... 197 6e-49
(Q98NC9) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 197 6e-49
(A3QHQ1) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 197 6e-49
(Q5ZS58) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 197 6e-49
GN128168_1(GN128168|pid:none) Sequence 11064 from Patent WO20090... 196 7e-49
(Q2JRY1) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 196 7e-49
(Q5WTD7) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 196 1e-48
CP001192_306(CP001192|pid:none) Rhizobium leguminosarum bv. trif... 196 1e-48
(A8MAX6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 196 1e-48
CP000910_2430(CP000910|pid:none) Renibacterium salmoninarum ATCC... 196 1e-48
CP000027_780(CP000027|pid:none) Dehalococcoides ethenogenes 195,... 196 1e-48
CU928169_570(CU928169|pid:none) Kluyveromyces thermotolerans str... 195 2e-48
(Q16DW5) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 195 2e-48
(A5URA8) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 195 2e-48
(Q5NXQ3) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 195 2e-48
(A5IAR5) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 195 2e-48
CP001130_19(CP001130|pid:none) Hydrogenobaculum sp. Y04AAS1, com... 195 2e-48
(Q5LWP5) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 194 3e-48
CR382125_1060(CR382125|pid:none) Kluyveromyces lactis strain NRR... 194 4e-48
(Q1M4A0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 194 4e-48
CP001618_1837(CP001618|pid:none) Beutenbergia cavernae DSM 12333... 194 5e-48
(B0CJW1) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 193 6e-48
A87454(A87454) hypothetical protein CC1651 [imported] - Caulobac... 193 8e-48
(A9IRP2) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 192 1e-47
CP000507_771(CP000507|pid:none) Shewanella amazonensis SB2B, com... 192 1e-47
(B5ZAF6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 192 1e-47
(Q12JC6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 192 2e-47
(Q6GDK4) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 191 2e-47
(Q2VZ01) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 191 2e-47
(Q2YWF9) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 191 2e-47
(A5IW24) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 191 2e-47
CP000758_426(CP000758|pid:none) Ochrobactrum anthropi ATCC 49188... 191 2e-47
CP000628_2228(CP000628|pid:none) Agrobacterium radiobacter K84 c... 191 2e-47
(Q0RFD5) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 191 2e-47
(Q2JZU0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 191 3e-47
EU016611_13(EU016611|pid:none) Uncultured Group I marine crenarc... 191 3e-47
CP001077_5(CP001077|pid:none) Rhizobium etli CIAT 652 plasmid pC... 191 4e-47
(Q0HMB1) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 191 4e-47
(A1S3M7) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 191 4e-47
(Q9YE97) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 190 5e-47
EU016591_34(EU016591|pid:none) Uncultured Group I marine crenarc... 190 5e-47
CP001161_181(CP001161|pid:none) Buchnera aphidicola str. 5A (Acy... 190 5e-47
(Q5YZ95) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 190 5e-47
(A8EVP8) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 190 5e-47
(Q6MHI3) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 190 5e-47
(Q82AW2) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 190 7e-47
(A0L0R2) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 190 7e-47
(Q8EIG9) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 190 7e-47
AP009384_4331(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 189 9e-47
AY211269_11(AY211269|pid:none) Campylobacter fetus strain 23D sa... 189 1e-46
AP009385_599(AP009385|pid:none) Burkholderia multivorans ATCC 17... 189 2e-46
(Q12F40) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 189 2e-46
(Q9ZM56) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 189 2e-46
(Q605H0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 189 2e-46
(A0KP07) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 189 2e-46
AM711867_1653(AM711867|pid:none) Clavibacter michiganensis subsp... 188 2e-46
(A0K4T1) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 188 2e-46
(Q4JA70) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 188 2e-46
CP000563_2805(CP000563|pid:none) Shewanella baltica OS155, compl... 188 2e-46
(Q47W60) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 188 3e-46
CP000891_2987(CP000891|pid:none) Shewanella baltica OS195, compl... 188 3e-46
CU207211_2496(CU207211|pid:none) Herminiimonas arsenicoxydans ch... 188 3e-46
(A1TYE6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 188 3e-46
AP011115_895(AP011115|pid:none) Rhodococcus opacus B4 DNA, compl... 187 3e-46
CP001158_182(CP001158|pid:none) Buchnera aphidicola str. Tuc7 (A... 187 3e-46
(Q9CBT0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 187 3e-46
GN128158_1(GN128158|pid:none) Sequence 11054 from Patent WO20090... 187 3e-46
(A0RN82) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 187 3e-46
CR931997_674(CR931997|pid:none) Corynebacterium jeikeium K411 co... 187 5e-46
(Q4JWH1) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 187 5e-46
(Q02K83) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 187 5e-46
(A1UID0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 187 6e-46
CP000555_1155(CP000555|pid:none) Methylibium petroleiphilum PM1,... 187 6e-46
CT573213_5059(CT573213|pid:none) Frankia alni str. ACN14A chromo... 187 6e-46
(A4SJ61) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 187 6e-46
CP000697_657(CP000697|pid:none) Acidiphilium cryptum JF-5, compl... 187 6e-46
(A6W2I3) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 186 8e-46
(B6IX34) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 186 8e-46
(A1R5H8) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 186 8e-46
CP000655_1758(CP000655|pid:none) Polynucleobacter necessarius su... 186 1e-45
AM747720_3273(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 186 1e-45
CP000804_327(CP000804|pid:none) Roseiflexus castenholzii DSM 139... 186 1e-45
CU458896_1896(CU458896|pid:none) Mycobacterium abscessus chromos... 186 1e-45
(Q73YI6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 186 1e-45
CP000021_631(CP000021|pid:none) Vibrio fischeri ES114 chromosome... 186 1e-45
(B8CTC6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 186 1e-45
AY744396_16(AY744396|pid:none) Uncultured proteobacterium RedeBA... 186 1e-45
CP001010_1243(CP001010|pid:none) Polynucleobacter necessarius su... 186 1e-45
(A4FA49) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 186 1e-45
(Q1H3S0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 185 2e-45
(Q21F95) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 185 2e-45
CP001154_1392(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 185 2e-45
(Q3JCP9) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 185 2e-45
FM954972_2407(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 184 3e-45
CP000656_2884(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 184 4e-45
(A1V0V0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 184 5e-45
CP000010_2021(CP000010|pid:none) Burkholderia mallei ATCC 23344 ... 184 5e-45
CP000744_3634(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 184 5e-45
(Q4LA35) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 184 5e-45
CP000563_3434(CP000563|pid:none) Shewanella baltica OS155, compl... 183 7e-45
(A0PNG6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 183 7e-45
(Q21U09) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 183 7e-45
CP000951_1799(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 183 9e-45
(Q2J886) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 183 9e-45
(Q5HL35) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 183 9e-45
CP001025_667(CP001025|pid:none) Burkholderia ambifaria MC40-6 ch... 183 9e-45
CP000480_4152(CP000480|pid:none) Mycobacterium smegmatis str. MC... 182 1e-44
(Q8ELF4) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 182 1e-44
CP001079_92(CP001079|pid:none) Anaplasma marginale str. Florida,... 182 1e-44
CP001068_2821(CP001068|pid:none) Ralstonia pickettii 12J chromos... 182 1e-44
CP000086_1298(CP000086|pid:none) Burkholderia thailandensis E264... 182 2e-44
GN128184_1(GN128184|pid:none) Sequence 11080 from Patent WO20090... 182 2e-44
(Q2SYZ1) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 182 2e-44
(A7MGP6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 182 2e-44
AM260479_3007(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 181 2e-44
(Q2S8W3) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 181 2e-44
CP001145_589(CP001145|pid:none) Coprothermobacter proteolyticus ... 181 2e-44
(Q0K762) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 181 2e-44
(Q7NXJ1) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 181 2e-44
(A6T221) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 181 3e-44
CP000699_3099(CP000699|pid:none) Sphingomonas wittichii RW1, com... 181 3e-44
(Q8YWS8) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 181 4e-44
(Q0AB69) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 180 7e-44
CP000529_924(CP000529|pid:none) Polaromonas naphthalenivorans CJ... 180 7e-44
(Q8XW45) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 179 9e-44
(Q87LV2) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 179 9e-44
AP009552_5541(AP009552|pid:none) Microcystis aeruginosa NIES-843... 179 9e-44
(Q4A0U0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 179 9e-44
AM295250_2062(AM295250|pid:none) Staphylococcus carnosus subsp. ... 179 2e-43
(B7M175) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 179 2e-43
(Q6D1X6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 179 2e-43
(Q0T867) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 178 2e-43
EU906250_1(EU906250|pid:none) Escherichia coli strain 493/89 3-m... 178 2e-43
(Q7N869) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 178 2e-43
CP000959_884(CP000959|pid:none) Burkholderia cenocepacia MC0-3 c... 178 3e-43
(A0AXR0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 178 3e-43
CU694390_168(CU694390|pid:none) Ralstonia solanacearum strain Mo... 177 4e-43
(B1IQK6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 177 4e-43
(A9IHJ7) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 177 4e-43
FM211055_3(FM211055|pid:none) Photorhabdus asymbiotica subsp. as... 177 4e-43
(B5YZH1) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 177 4e-43
EU037098_1(EU037098|pid:none) Pseudomonas putida strain J5 ketop... 177 5e-43
(Q326A3) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 177 5e-43
(Q09672) RecName: Full=Probable 3-methyl-2-oxobutanoate hydroxym... 177 5e-43
(A4JBS4) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 177 5e-43
CP000806_313(CP000806|pid:none) Cyanothece sp. ATCC 51142 circul... 177 6e-43
(Q6LMJ6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 177 6e-43
(A0LTD0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 177 6e-43
(A1SIB6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 177 6e-43
AM942444_1294(AM942444|pid:none) Corynebacterium urealyticum DSM... 176 8e-43
(B1J2C2) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 176 1e-42
CP000820_1731(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 176 1e-42
FM180568_137(FM180568|pid:none) Escherichia coli 0127:H6 E2348/6... 175 2e-42
(A1A7I0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 175 2e-42
(B7NI94) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 175 2e-42
CP001365_2470(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 175 2e-42
GN128208_1(GN128208|pid:none) Sequence 11104 from Patent WO20090... 175 2e-42
CP000830_2950(CP000830|pid:none) Dinoroseobacter shibae DFL 12, ... 174 3e-42
(Q5NL34) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 174 4e-42
(A4VPM6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 174 4e-42
CP000826_3976(CP000826|pid:none) Serratia proteamaculans 568, co... 174 4e-42
(Q0TLJ8) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 174 4e-42
(A9MPM1) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 174 4e-42
AE008692_1952(AE008692|pid:none) Zymomonas mobilis subsp. mobili... 174 4e-42
AM942759_195(AM942759|pid:none) Proteus mirabilis strain HI4320,... 174 5e-42
(Q3K6Q6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 174 5e-42
(Q57T73) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 173 7e-42
(A4XYC4) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 173 7e-42
(A5W974) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 173 7e-42
(B7JBM8) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 173 7e-42
CP001138_204(CP001138|pid:none) Salmonella enterica subsp. enter... 173 7e-42
(Q83HM1) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 173 9e-42
(Q4FVG8) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 173 9e-42
(Q8Z9D2) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 173 9e-42
(B5Y1P5) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 173 9e-42
CP001339_865(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, c... 172 1e-41
CP001127_193(CP001127|pid:none) Salmonella enterica subsp. enter... 172 1e-41
CP000886_223(CP000886|pid:none) Salmonella enterica subsp. enter... 172 1e-41
(Q0B4Z6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 172 1e-41
CP001349_4332(CP001349|pid:none) Methylobacterium nodulans ORS 2... 172 1e-41
(Q31FF5) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 172 2e-41
(Q6NEB7) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 172 2e-41
CP000926_4668(CP000926|pid:none) Pseudomonas putida GB-1, comple... 172 2e-41
(Q47B66) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 171 3e-41
(Q9JUY0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 171 4e-41
(Q46XJ2) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 171 4e-41
(Q4FMW6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 170 6e-41
CP000943_4335(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 170 6e-41
CP000941_176(CP000941|pid:none) Xylella fastidiosa M12, complete... 170 6e-41
(Q1LTN1) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 170 8e-41
(Q48N86) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 170 8e-41
AM286415_680(AM286415|pid:none) Yersinia enterocolitica subsp. e... 169 1e-40
AY210414_3(AY210414|pid:none) Pseudomonas fluorescens polynucleo... 169 1e-40
CP001032_776(CP001032|pid:none) Opitutus terrae PB90-1, complete... 169 1e-40
CP001013_1171(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 169 1e-40
FM209186_5114(FM209186|pid:none) Pseudomonas aeruginosa LESB58 c... 169 2e-40
(A5WHD0) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 169 2e-40
(Q9JZW6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 169 2e-40
(Q8D2A5) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 168 2e-40
(Q9PGR9) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 168 2e-40
(Q02FU3) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 168 3e-40
CP000744_5374(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 167 4e-40
(B0R5P8) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 167 4e-40
(Q5V3P6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 167 6e-40
AY596297_770(AY596297|pid:none) Haloarcula marismortui ATCC 4304... 167 6e-40
(A4TPV5) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 166 1e-39
AC0413(AC0413) 3-methyl-2-oxobutanoate hydroxymethyltransferase ... 166 1e-39
CP000381_788(CP000381|pid:none) Neisseria meningitidis 053442, c... 166 1e-39
(Q66EG3) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 164 3e-39
AY658553_1(AY658553|pid:none) Synthetic construct Peudomonas aer... 164 3e-39
CP001157_4126(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 164 3e-39
(A7FM22) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 164 3e-39
(A1WDW4) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 164 4e-39
CP000542_28(CP000542|pid:none) Verminephrobacter eiseniae EF01-2... 164 4e-39
(Q3INP4) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 162 1e-38
(Q1QSZ9) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 162 1e-38
CP000884_1817(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 162 2e-38
CP001111_1517(CP001111|pid:none) Stenotrophomonas maltophilia R5... 160 6e-38
(B2FL67) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 160 6e-38
(Q2P377) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 159 1e-37
(Q5H0A3) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 159 2e-37
(Q3BUL6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 157 4e-37
(Q4UTV5) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 157 7e-37
(B0RTU1) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 156 9e-37
CP000926_1819(CP000926|pid:none) Pseudomonas putida GB-1, comple... 155 2e-36
(Q46JG1) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 154 3e-36
(Q1I9K4) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 153 1e-35
(A5GRJ3) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 152 1e-35
CP000975_339(CP000975|pid:none) Methylacidiphilum infernorum V4,... 152 1e-35
CR543861_2760(CR543861|pid:none) Acinetobacter sp. ADP1 complete... 152 2e-35
(A3PEE4) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 150 8e-35
(Q319H9) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 149 2e-34
(A2BY17) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 149 2e-34
(Q7TU60) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 148 3e-34
CP000878_1359(CP000878|pid:none) Prochlorococcus marinus str. MI... 147 7e-34
(A2BSN1) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 146 9e-34
CT971583_1760(CT971583|pid:none) Synechococcus WH7803 complete g... 144 4e-33
GN128154_1(GN128154|pid:none) Sequence 11050 from Patent WO20090... 142 2e-32
(Q0IC75) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 142 2e-32
CP000435_708(CP000435|pid:none) Synechococcus sp. CC9311, comple... 142 2e-32
(Q3AVB7) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 140 5e-32
AJ544860_12(AJ544860|pid:none) Thermotoga sp. RQ2 ORF1, ntpC gen... 138 3e-31
(Q3ALB9) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 136 9e-31
(Q7TV48) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 135 2e-30
(A2CB80) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 133 8e-30
(Q89TZ6) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran... 133 1e-29
CP001280_1588(CP001280|pid:none) Methylocella silvestris BL2, co... 128 3e-28
CP001075_366(CP001075|pid:none) Rhizobium etli CIAT 652 plasmid ... 95 3e-18
CP000629_1344(CP000629|pid:none) Agrobacterium radiobacter K84 c... 89 2e-16
AE016825_3290(AE016825|pid:none) Chromobacterium violaceum ATCC ... 89 2e-16
BA000012_6015(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 89 2e-16
CP001193_412(CP001193|pid:none) Rhizobium leguminosarum bv. trif... 88 4e-16
BA000012_1354(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 85 3e-15
AY316746_132(AY316746|pid:none) Rhizobium sp. NGR234 megaplasmid... 84 7e-15
CP000521_566(CP000521|pid:none) Acinetobacter baumannii ATCC 179... 83 1e-14
EF618553_14(EF618553|pid:none) Mesorhizobium sp. CJ1 plasmid Orf... 82 2e-14
AJ245666_1(AJ245666|pid:none) Rhizobium meliloti rkpL, rkpM, rkp... 81 5e-14
A95912(A95912) probable ATPGTP-binding hydroxymethyltransferase ... 80 8e-14
AJ580305_1(AJ580305|pid:none) Rhizobium etli partial panB gene f... 50 1e-04
CP000521_567(CP000521|pid:none) Acinetobacter baumannii ATCC 179... 46 0.002
EU016656_62(EU016656|pid:none) Uncultured Group I marine crenarc... 43 0.018
(Q8K9I3) RecName: Full=ABC transporter ATP-binding protein uup; ... 37 0.76
CP000813_3219(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 37 1.3
BX571867_152(BX571867|pid:none) Photorhabdus luminescens subsp. ... 36 1.7
BX571867_18(BX571867|pid:none) Photorhabdus luminescens subsp. l... 36 1.7
AM476889_1(AM476889|pid:none) Vitis vinifera contig VV78X247625.... 35 3.8
CP000939_2126(CP000939|pid:none) Clostridium botulinum B1 str. O... 35 3.8
BX571864_254(BX571864|pid:none) Photorhabdus luminescens subsp. ... 35 3.8
CP000884_1395(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 35 3.8
(Q10NX8) RecName: Full=Beta-galactosidase 6; Short=Lact... 35 4.9
CP000480_4245(CP000480|pid:none) Mycobacterium smegmatis str. MC... 35 4.9
AY144118_18(AY144118|pid:none) Photorhabdus luminescens strain W... 35 4.9
AK067479_1(AK067479|pid:none) Oryza sativa Japonica Group cDNA c... 35 4.9

>CP001078_1601(CP001078|pid:none) Clostridium botulinum E3 str.
Alaska E43, complete genome.
Length = 275

Score = 265 bits (677), Expect = 2e-69
Identities = 134/270 (49%), Positives = 178/270 (65%)
Frame = +1

Query: 118 KKTVLDILKKYKDGIPISMVTAYDFTSSKIVDKSGMDMILVGDSLGMVMNGESGTTSVTM 297
K T+ + G ISM+TAYD++ +KI+D+SG++ IL+GDSLGMV+ GE T SVT+
Sbjct: 2 KNTIATFQEFKNKGKKISMLTAYDYSMAKIIDESGINGILIGDSLGMVIKGEEDTLSVTV 61

Query: 298 EQMIYHCKSVMKGSKRSFVVGDMPFGSYETSTKDAVSNAIRLIKEGGVDAIKLEGGKKQF 477
+++IYH KSV KG+K + +V DMPF SY TS ++AV NA ++IKEGG +A+KLEGG
Sbjct: 62 DEIIYHTKSVKKGAKNALIVSDMPFLSYHTSVEEAVKNAGKMIKEGGANAVKLEGGASVI 121

Query: 478 EKIKAICDTGILVVGHIGLTPQTSTSLGGFKLQGKTXXXXXXXXXXXXXXXXXGCFXIVL 657
++IKAI D I V+GH+GLTPQ+ + GGFK+QGK+ G F IVL
Sbjct: 122 KQIKAIVDAQIPVMGHLGLTPQSVNAFGGFKIQGKSEEAAKRLIEDAKLIEDAGAFAIVL 181

Query: 658 XMVPHATAVAITNTLSIPTIGIGAGNGTSGQVLVYHDLLGXYSDFVPKFCKQYATLSENI 837
VP A IT +SIPTIGIGAGN GQ+LVY D+LG + DF+PKF KQYA L +
Sbjct: 182 ECVPKKVAEIITKEISIPTIGIGAGNECDGQILVYQDMLGMFDDFIPKFVKQYANLGAQM 241

Query: 838 DQSLKNYKNEVESXEFPSPTHSFSMXESEL 927
++++ Y EV FP HSF + E EL
Sbjct: 242 REAIQIYIGEVGEGSFPQDKHSFKIDEKEL 271

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,403,571,995
Number of extensions: 25858404
Number of successful extensions: 72246
Number of sequences better than 10.0: 457
Number of HSP's gapped: 71340
Number of HSP's successfully gapped: 458
Length of query: 318
Length of database: 1,040,966,779
Length adjustment: 128
Effective length of query: 190
Effective length of database: 630,818,299
Effective search space: 119855476810
Effective search space used: 119855476810
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.61 gvh: 0.07 alm: 0.31 top: 0.70 tms: 0.07 mit: 0.22 mip: 0.05
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.05 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 1.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

44.0 %: nuclear
28.0 %: cytoplasmic
12.0 %: mitochondrial
8.0 %: Golgi
8.0 %: vesicles of secretory system

>> prediction for Contig-U10415-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 1
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0