Contig-U10389-1
Contig ID Contig-U10389-1
Contig update 2002. 9.13
Contig sequence
>Contig-U10389-1 (Contig-U10389-1Q) /CSM_Contig/Contig-U10389-1Q.Seq.d
TAACACTCTTTTAATCAATCTAAAAATATATATAAATAAATAACCATGGT
TGTTGTTACTGAAGAAATTGTAAATGGATTAAAAGAAACATTAACAGATG
TTTCACAACCAATTGCTAAAAGATTTAGATCATTATTTACATTAAGAAAT
TTAAATGGACCATTATGTATTGATGCTATGGCTAGTGCATTAAATGATAA
ATCAGCATTATTAAGACATGAAATTGCATATTGTTTAGGACAAATGGAAG
ATGAATATGCATTAAAAGTTTTAATTGATTTAGTAAAGAATAGTGATGAA
CATCCAATGGTACGTCATGAAGCAGCAGAGGCATTAGGAGCAATTGGTAG
TGAAAGTGCTCATAAAACATTGAAAGAGTATTCAAATGATCCAGTTAGAG
AGGTTAGTGAAACTTGTCAATTGGCATTATCAAGAGTTGAATGGTATGAA
AAGAATAAACCAGAAACAGAAGAGGATAAAATGTATATGTCAGTAGACCC
AGCTCCACCACTTAAAAAAGGATCTGTTAGCAGAGACGAATTAAGATCAA
AATTTTTAGATTCAAATTTAGATATTTTCAATCGTTATAGAGCATTATTT
TCATTACGTGATATTGGTGATGAACAATCTGTTCTCGCCTTATGCGATGG
TTTAAAAGATCAATCTTCAGCTTTACTCAGACATGAGGTTGCCTTTGTTT
TAGGTCAATTACAACATCGTGTAGCTATTGATCCATTAACAACTTGTGTT
TTAGATGAATCTGAAAATGCAATGGTACGTCATGAAGCTGCTGAAGCTTT
GGGCGCAATCGCTTCAACTGAAACTATCCCATTATTAGAGAAATTATTAC
AAGATAAAGAACCAATCGTTAGTGAATCTTGTGCTGTAGCTTTAGATGTA
ACTGAATATTTTAATAATACTGAATCTTTTCAATATGCTGATGGTATTAA
AATTTTATTAGAAAAGAATTTGGTNACCAACAACAAAAATAAATTTTTTA
AAATAAAATATAAAATATAAAATATAAA

Gap no gap
Contig length 1028
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 3728528
End point 3729557
Strand (PLUS/MINUS) PLUS
Number of clones 2
Number of EST 2
Link to clone list U10389
List of clone(s)

est1=VFK568E,1,1029
est2=VFF216Z,724,975
Translated Amino Acid sequence
*hsfnqskniyk*ITMVVVTEEIVNGLKETLTDVSQPIAKRFRSLFTLRNLNGPLCIDAM
ASALNDKSALLRHEIAYCLGQMEDEYALKVLIDLVKNSDEHPMVRHEAAEALGAIGSESA
HKTLKEYSNDPVREVSETCQLALSRVEWYEKNKPETEEDKMYMSVDPAPPLKKGSVSRDE
LRSKFLDSNLDIFNRYRALFSLRDIGDEQSVLALCDGLKDQSSALLRHEVAFVLGQLQHR
VAIDPLTTCVLDESENAMVRHEAAEALGAIASTETIPLLEKLLQDKEPIVSESCAVALDV
TEYFNNTESFQYADGIKILLEKNLVTNNKNKFFKIKYKI*ni


Translated Amino Acid sequence (All Frames)
Frame A:
*hsfnqskniyk*ITMVVVTEEIVNGLKETLTDVSQPIAKRFRSLFTLRNLNGPLCIDAM
ASALNDKSALLRHEIAYCLGQMEDEYALKVLIDLVKNSDEHPMVRHEAAEALGAIGSESA
HKTLKEYSNDPVREVSETCQLALSRVEWYEKNKPETEEDKMYMSVDPAPPLKKGSVSRDE
LRSKFLDSNLDIFNRYRALFSLRDIGDEQSVLALCDGLKDQSSALLRHEVAFVLGQLQHR
VAIDPLTTCVLDESENAMVRHEAAEALGAIASTETIPLLEKLLQDKEPIVSESCAVALDV
TEYFNNTESFQYADGIKILLEKNLVTNNKNKFFKIKYKI*ni


Frame B:
ntllinlkiyink*pwllllkkl*md*kkh*qmfhnqllkdldhylh*ei*mdhyvlmlw
lvh*minqhy*dmklhiv*dkwkmnmh*kf*li**rivmniqwyvmkqqrh*eqlvvkvl
ikh*ksiqmiqlerlvklvnwhyqelngmkrinqkqkrikcicq*tqlhhlkkdllaetn
*dqnf*iqi*ifsiviehyfhyvilvmnnlfspyamv*kinlqlysdmrlplf*vnyniv
*llih*qlvf*mnlkmqwyvmkllklwaqslqlklshy*rnyykiknqslvnlvl*l*m*
lniliilnlfnmlmvlkfy*kriwxpttkinflk*nikyki*


Frame C:
tlf*si*kyi*innhgccy*rnckwikrninrcfttnc*ki*iiiyikkfkwtimy*cyg
*cik**isiikt*ncilfrtngr*iciksfn*fske***tsngts*ssrgirsnw**kcs
*niervfk*ss*rg**nlsigiiks*mv*ke*trnrrg*nvyvsrpsstt*kric*qrri
kikifrfkfryfqsl*siifit*yw**ticsrlmrwfkrsifsftqt*gclcfrsittsc
sy*sinnlcfr*i*kcngts*sc*sfgrnrfn*nypiireiitr*rtnr**ilccsfrcn
*if**y*ifsic*wy*nfirkefgxqqqk*if*nki*nikyk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U10389-1 (Contig-U10389-1Q)
/CSM_Contig/Contig-U10389-1Q.Seq.d
(1028 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U10389-1 (Contig-U10389-1Q) /CSM_Contig/Conti... 1945 0.0
Contig-U06342-1 (Contig-U06342-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U00653-1 (Contig-U00653-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U13282-1 (Contig-U13282-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U11864-1 (Contig-U11864-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U09473-1 (Contig-U09473-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U04591-1 (Contig-U04591-1Q) /CSM_Contig/Conti... 38 0.018
Contig-U14865-1 (Contig-U14865-1Q) /CSM_Contig/Conti... 36 0.073
Contig-U14330-1 (Contig-U14330-1Q) /CSM_Contig/Conti... 36 0.073
Contig-U14149-1 (Contig-U14149-1Q) /CSM_Contig/Conti... 36 0.073

>Contig-U10389-1 (Contig-U10389-1Q) /CSM_Contig/Contig-U10389-1Q.Seq.d
Length = 1028

Score = 1945 bits (981), Expect = 0.0
Identities = 984/984 (100%)
Strand = Plus / Plus


Query: 1 taacactcttttaatcaatctaaaaatatatataaataaataaccatggttgttgttact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taacactcttttaatcaatctaaaaatatatataaataaataaccatggttgttgttact 60


Query: 61 gaagaaattgtaaatggattaaaagaaacattaacagatgtttcacaaccaattgctaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaagaaattgtaaatggattaaaagaaacattaacagatgtttcacaaccaattgctaaa 120


Query: 121 agatttagatcattatttacattaagaaatttaaatggaccattatgtattgatgctatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agatttagatcattatttacattaagaaatttaaatggaccattatgtattgatgctatg 180


Query: 181 gctagtgcattaaatgataaatcagcattattaagacatgaaattgcatattgtttagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctagtgcattaaatgataaatcagcattattaagacatgaaattgcatattgtttagga 240


Query: 241 caaatggaagatgaatatgcattaaaagttttaattgatttagtaaagaatagtgatgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caaatggaagatgaatatgcattaaaagttttaattgatttagtaaagaatagtgatgaa 300


Query: 301 catccaatggtacgtcatgaagcagcagaggcattaggagcaattggtagtgaaagtgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 catccaatggtacgtcatgaagcagcagaggcattaggagcaattggtagtgaaagtgct 360


Query: 361 cataaaacattgaaagagtattcaaatgatccagttagagaggttagtgaaacttgtcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cataaaacattgaaagagtattcaaatgatccagttagagaggttagtgaaacttgtcaa 420


Query: 421 ttggcattatcaagagttgaatggtatgaaaagaataaaccagaaacagaagaggataaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttggcattatcaagagttgaatggtatgaaaagaataaaccagaaacagaagaggataaa 480


Query: 481 atgtatatgtcagtagacccagctccaccacttaaaaaaggatctgttagcagagacgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atgtatatgtcagtagacccagctccaccacttaaaaaaggatctgttagcagagacgaa 540


Query: 541 ttaagatcaaaatttttagattcaaatttagatattttcaatcgttatagagcattattt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttaagatcaaaatttttagattcaaatttagatattttcaatcgttatagagcattattt 600


Query: 601 tcattacgtgatattggtgatgaacaatctgttctcgccttatgcgatggtttaaaagat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcattacgtgatattggtgatgaacaatctgttctcgccttatgcgatggtttaaaagat 660


Query: 661 caatcttcagctttactcagacatgaggttgcctttgttttaggtcaattacaacatcgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 caatcttcagctttactcagacatgaggttgcctttgttttaggtcaattacaacatcgt 720


Query: 721 gtagctattgatccattaacaacttgtgttttagatgaatctgaaaatgcaatggtacgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtagctattgatccattaacaacttgtgttttagatgaatctgaaaatgcaatggtacgt 780


Query: 781 catgaagctgctgaagctttgggcgcaatcgcttcaactgaaactatcccattattagag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 catgaagctgctgaagctttgggcgcaatcgcttcaactgaaactatcccattattagag 840


Query: 841 aaattattacaagataaagaaccaatcgttagtgaatcttgtgctgtagctttagatgta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aaattattacaagataaagaaccaatcgttagtgaatcttgtgctgtagctttagatgta 900


Query: 901 actgaatattttaataatactgaatcttttcaatatgctgatggtattaaaattttatta 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 actgaatattttaataatactgaatcttttcaatatgctgatggtattaaaattttatta 960


Query: 961 gaaaagaatttggtnaccaacaac 984
||||||||||||||||||||||||
Sbjct: 961 gaaaagaatttggtnaccaacaac 984


>Contig-U06342-1 (Contig-U06342-1Q) /CSM_Contig/Contig-U06342-1Q.Seq.d
Length = 709

Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 23 aaaatatatataaataaataa 43
|||||||||||||||||||||
Sbjct: 656 aaaatatatataaataaataa 676


>Contig-U00653-1 (Contig-U00653-1Q) /CSM_Contig/Contig-U00653-1Q.Seq.d
Length = 1230

Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 841 aaattattacaagataaagaa 861
|||||||||||||||||||||
Sbjct: 1137 aaattattacaagataaagaa 1157


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 19,033
Number of Sequences: 6905
Number of extensions: 19033
Number of successful extensions: 2389
Number of sequences better than 10.0: 382
length of query: 1028
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1012
effective length of database: 5,564,391
effective search space: 5631163692
effective search space used: 5631163692
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.19
Homology vs DNA
Query= Contig-U10389-1 (Contig-U10389-1Q) /CSM_Contig/Contig-U10389-1Q.Seq.d
(1028 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 1505 0.0 1
(BJ433667) Dictyostelium discoideum cDNA clone:ddv22g17, 3' ... 1273 0.0 1
(BJ415439) Dictyostelium discoideum cDNA clone:ddv22g17, 5' ... 1138 0.0 1
(BJ428231) Dictyostelium discoideum cDNA clone:ddv11o04, 3' ... 303 9e-86 3
(EE674390) EST1494 Mycelia Grown in Nitrogen Limited Media C... 50 1e-10 4
(BI502500) kt75g11.y3 Strongyloides ratti L2 pAMP1 v1 Chiape... 56 2e-07 2
(DW248425) pOP-EON00735_EST_C_1_pSK_SK EON (Oil Palm Embryoi... 42 3e-07 3
(DW248558) pOP-EON00882_EST_C_1_pSK_SK EON (Oil Palm Embryoi... 42 4e-07 3
(DW248755) pOP-EON01109_EST_C_1_pSK_SK EON (Oil Palm Embryoi... 42 4e-07 3
(DW248300) pOP-EON00599_EST_C_1_pSK_SK EON (Oil Palm Embryoi... 42 4e-07 3
(BE224154) kp55g04.y1 TBN95TM-SSFH Strongyloides stercoralis... 56 7e-07 2
(DY452092) PCAA-aaa108d14.g2 UCI-12 Podocoryne carnea cDNA 5... 54 3e-06 2
(FE265224) CAZO4350.rev CAZO Naegleria gruberi Flagellate St... 50 3e-06 2
(EU247113) Lycosa singoriensis deoxyhypusine hydroxylase-lik... 46 2e-05 2
(BI742499) kt51f12.y4 Strongyloides ratti L1 pAMP1 v3 Chiape... 48 4e-05 2
(CD147357) ML1-0007T-V076-E08-U.B ML1-0007 Schistosoma manso... 46 4e-05 3
(CD097341) ME1-0014T-M119-H01-U.G ME1-0014 Schistosoma manso... 46 4e-05 3
(CD097277) ME1-0014T-M119-A11-U.G ME1-0014 Schistosoma manso... 46 4e-05 3
(CD147604) ML1-0007T-V110-D04-U.B ML1-0007 Schistosoma manso... 46 4e-05 3
(CD131953) MG1-0015T-R269-A05-U.G MG1-0015 Schistosoma manso... 46 5e-05 3
(FC815925) Sr_pAMT7_04j13_T7 S. ratti mixed stage pAMP Stron... 48 5e-05 2
(DW248512) pOP-EON00834_EST_C_1_pSK_SK EON (Oil Palm Embryoi... 42 1e-04 3
(CJ391427) Molgula tectiformis cDNA, gonad clone:mtgd016k11,... 46 0.002 2
(FC810502) Sr_pASP6_04j13_SP6 S. ratti mixed stage pAMP Stro... 48 0.003 2
(AW055793) SWAMCAC38C08SK Brugia malayi adult male cDNA (SAW... 54 0.011 1
(EJ380911) 1092963761641 Global-Ocean-Sampling_GS-28-01-01-1... 40 0.034 2
(EI053027) hhd0015bc08.g1 hhd Oryza coarctata genomic clone ... 52 0.042 1
(AM098523) Lutzomyia longipalpis EST clone NSFM-131e07, sequ... 52 0.042 1
(BX255881) Zebrafish DNA sequence from clone CH211-268E23 in... 42 0.042 3
(AC004153) Plasmodium falciparum chromosome 12 clone 3D7, **... 36 0.051 8
(BU776436) SJECMH07 SJE Schistosoma japonicum cDNA similar t... 48 0.12 2
(ES225148) MpSG_ag2_C21 Myzus persicae, tobacco lineage, aph... 38 0.12 2
(BU776261) SJECLB11 SJE Schistosoma japonicum cDNA similar t... 48 0.12 2
(BU772766) SJEFDF05 SJE Schistosoma japonicum cDNA, mRNA seq... 48 0.12 2
(ES223186) MpHnorm_ag2_E21 Myzus persicae, tobacco lineage, ... 38 0.13 2
(DW010897) w12b13_M13F Myzus persicae, tobacco lineage, whol... 38 0.14 2
(CR382398) Plasmodium falciparum chromosome 6, complete sequ... 36 0.14 10
(EA743440) Sequence 14886 from patent US 7368527. 50 0.17 1
(AP002985) Homo sapiens genomic DNA, chromosome 11q clone:CT... 50 0.17 1
(AP001574) Homo sapiens genomic DNA, chromosome 8q23, clone:... 50 0.17 1
(AL513024) Human DNA sequence from clone RP11-555B19 on chro... 50 0.17 1
(AC025647) Homo sapiens, clone RP11-316J7, complete sequence. 50 0.17 1
(AF235095) Homo sapiens chromosome 8 clone CTA-388H9 map 8q2... 50 0.17 1
(AC013608) Homo sapiens clone RP11-10G10, WORKING DRAFT SEQU... 50 0.17 1
(ES274168) AJAD-aaa10e11.g1 Aph cDNA-BeetSlice Aphanomyces c... 50 0.17 1
(DW438690) HHAGE037420 Human liver regeneration after partia... 50 0.17 1
(FG114137) PRAG-aab59a07.g1 Sand_fly_EST_Normalized Phleboto... 50 0.17 1
(EY211476) PRAG-aab13h08.g1 Sand_fly_EST_Normalized Phleboto... 50 0.17 1
(EY209720) PRAG-aaa45e08.g1 Sand_fly_EST_Normalized Phleboto... 50 0.17 1
(BB536979) Mus musculus 0 day neonate eyeball cDNA, RIKEN fu... 46 0.21 2
(BU769991) SJECRB01 SJE Schistosoma japonicum cDNA similar t... 48 0.22 2
(ER338290) 1092344324927 Global-Ocean-Sampling_GS-34-01-01-1... 36 0.24 3
(AY816141) Schistosoma japonicum SJCHGC06636 protein mRNA, c... 48 0.26 2
(CD119692) ME1-0055T-R241-B12-U.G ME1-0055 Schistosoma manso... 40 0.27 2
(AC208397) Macaca mulatta chromosome 1 clone CH250-347K17, W... 34 0.37 2
(EY401394) pOP-CNH01999_EST_C_1_pSK_SK CNH (Oil Palm Non-Emb... 38 0.39 2
(DC233256) Plasmodium berghei strain ANKA cDNA clone:SG02711... 40 0.43 2
(DR108926) USDA-FP_166186 5th-instar Anoplophora glabripenni... 46 0.51 2
(CD079989) MA3-9999U-M292-C04-U.B MA3-0001 Schistosoma manso... 40 0.52 2
(ER319584) 1092344168188 Global-Ocean-Sampling_GS-34-01-01-1... 44 0.56 2
(EY400326) pOP-CNH04936_EST_C_1_pSK_SK CNH (Oil Palm Non-Emb... 38 0.57 2
(AM043871) Schistosoma mansoni lung schistosomulum EST, clon... 40 0.59 2
(BX004814) Zebrafish DNA sequence from clone CH211-103I6 in ... 48 0.66 1
(CU207345) CH251-254C10, complete sequence. 48 0.66 1
(U31961) Drosophila melanogaster bithorax complex (BX-C), co... 48 0.66 1
(L07835) Drosophila melanogaster (clone DS07696) Abd-B gene. 48 0.66 1
(AE014297) Drosophila melanogaster chromosome 3R, complete s... 48 0.66 1
(AC095018) Drosophila melanogaster clone BACR24L18, complete... 48 0.66 1
(AC091636) Drosophila melanogaster, chromosome 3R, region 89... 48 0.66 1
(AL161722) Human DNA sequence from clone RP11-497J7 on chrom... 48 0.66 1
(CU693485) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.66 1
(AC215569) Pteropus vampyrus clone CH279-57K23, WORKING DRAF... 48 0.66 1
(AC211900) Pongo abelii chromosome UNKNOWN clone CH276-409I1... 48 0.66 1
(AC200704) Pan troglodytes chromosome X clone CH251-593M13, ... 48 0.66 1
(AC020384) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 48 0.66 1
(ER313768) 1092344121548 Global-Ocean-Sampling_GS-34-01-01-1... 48 0.66 1
(EJ919144) 1093018591477 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.66 1
(EJ824630) 1093017554189 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.66 1
(EJ770384) 1092966001683 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.66 1
(EJ492887) 1095403550969 Global-Ocean-Sampling_GS-28-01-01-1... 48 0.66 1
(DE364535) Bombyx mori genomic DNA, BAC clone:BET_611_C02. 48 0.66 1
(CL586409) OB__Ba0083E10.r OB__Ba Oryza brachyantha genomic ... 48 0.66 1
(CL560826) OB__Ba0018J19.f OB__Ba Oryza brachyantha genomic ... 48 0.66 1
(EE275814) PMAO-aac87a12.g1 Lamprey_EST_Embryo Petromyzon ma... 48 0.66 1
(DB798915) Sus scrofa mRNA, clone:DCI010105G05, 5' end, expr... 48 0.66 1
(BU766316) SJEACH01 SJE Schistosoma japonicum cDNA similar t... 48 0.66 1
(BH148669) ENTQO84TR Entamoeba histolytica Sheared DNA Entam... 46 0.69 2
(AC189475) Brassica rapa subsp. pekinensis clone KBrB080J22,... 40 0.98 5
(BZ458708) BONRS96TR BO_1.6_2_KB_tot Brassica oleracea genom... 34 1.2 3
(CK409301) AUF_IfLvr_222_b13 Ictalurus furcatus liver cDNA l... 32 1.3 3
(CU856350) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 1.3 2
(AC147975) Pan troglodytes BAC clone CH251-510J15 from chrom... 32 1.3 2
(AC192126) Pan troglodytes BAC clone CH251-628B7 from chromo... 32 1.3 2
(AC037195) Homo sapiens chromosome 3p clone RP11-377l18, WOR... 32 1.4 2
(CR932037) Zebrafish DNA sequence from clone DKEYP-44B3 in l... 44 1.4 2
(AC011229) Homo sapiens BAC clone CTD-2004K7 from 7, complet... 32 1.4 2
(BU770236) SJECTG11 SJE Schistosoma japonicum cDNA, mRNA seq... 44 1.4 2
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 32 1.4 12
(AC173251) Bos taurus clone CH240-411M5, WORKING DRAFT SEQUE... 46 1.4 6
(AC004349) Drosophila melanogaster DNA sequence (P1 DS04327 ... 32 1.4 7

>(AC116984) Dictyostelium discoideum chromosome 2 map 2567470-3108875
strain AX4, complete sequence.
Length = 541399

Score = 1505 bits (759), Expect = 0.0
Identities = 759/759 (100%)
Strand = Plus / Minus


Query: 187 gcattaaatgataaatcagcattattaagacatgaaattgcatattgtttaggacaaatg 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20699 gcattaaatgataaatcagcattattaagacatgaaattgcatattgtttaggacaaatg 20640


Query: 247 gaagatgaatatgcattaaaagttttaattgatttagtaaagaatagtgatgaacatcca 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20639 gaagatgaatatgcattaaaagttttaattgatttagtaaagaatagtgatgaacatcca 20580


Query: 307 atggtacgtcatgaagcagcagaggcattaggagcaattggtagtgaaagtgctcataaa 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20579 atggtacgtcatgaagcagcagaggcattaggagcaattggtagtgaaagtgctcataaa 20520


Query: 367 acattgaaagagtattcaaatgatccagttagagaggttagtgaaacttgtcaattggca 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20519 acattgaaagagtattcaaatgatccagttagagaggttagtgaaacttgtcaattggca 20460


Query: 427 ttatcaagagttgaatggtatgaaaagaataaaccagaaacagaagaggataaaatgtat 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20459 ttatcaagagttgaatggtatgaaaagaataaaccagaaacagaagaggataaaatgtat 20400


Query: 487 atgtcagtagacccagctccaccacttaaaaaaggatctgttagcagagacgaattaaga 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20399 atgtcagtagacccagctccaccacttaaaaaaggatctgttagcagagacgaattaaga 20340


Query: 547 tcaaaatttttagattcaaatttagatattttcaatcgttatagagcattattttcatta 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20339 tcaaaatttttagattcaaatttagatattttcaatcgttatagagcattattttcatta 20280


Query: 607 cgtgatattggtgatgaacaatctgttctcgccttatgcgatggtttaaaagatcaatct 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20279 cgtgatattggtgatgaacaatctgttctcgccttatgcgatggtttaaaagatcaatct 20220


Query: 667 tcagctttactcagacatgaggttgcctttgttttaggtcaattacaacatcgtgtagct 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20219 tcagctttactcagacatgaggttgcctttgttttaggtcaattacaacatcgtgtagct 20160


Query: 727 attgatccattaacaacttgtgttttagatgaatctgaaaatgcaatggtacgtcatgaa 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20159 attgatccattaacaacttgtgttttagatgaatctgaaaatgcaatggtacgtcatgaa 20100


Query: 787 gctgctgaagctttgggcgcaatcgcttcaactgaaactatcccattattagagaaatta 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20099 gctgctgaagctttgggcgcaatcgcttcaactgaaactatcccattattagagaaatta 20040


Query: 847 ttacaagataaagaaccaatcgttagtgaatcttgtgctgtagctttagatgtaactgaa 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20039 ttacaagataaagaaccaatcgttagtgaatcttgtgctgtagctttagatgtaactgaa 19980


Query: 907 tattttaataatactgaatcttttcaatatgctgatggt 945
|||||||||||||||||||||||||||||||||||||||
Sbjct: 19979 tattttaataatactgaatcttttcaatatgctgatggt 19941

Score = 371 bits (187), Expect = 4e-98
Identities = 187/187 (100%)
Strand = Plus / Minus


Query: 1 taacactcttttaatcaatctaaaaatatatataaataaataaccatggttgttgttact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20966 taacactcttttaatcaatctaaaaatatatataaataaataaccatggttgttgttact 20907


Query: 61 gaagaaattgtaaatggattaaaagaaacattaacagatgtttcacaaccaattgctaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20906 gaagaaattgtaaatggattaaaagaaacattaacagatgtttcacaaccaattgctaaa 20847


Query: 121 agatttagatcattatttacattaagaaatttaaatggaccattatgtattgatgctatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20846 agatttagatcattatttacattaagaaatttaaatggaccattatgtattgatgctatg 20787


Query: 181 gctagtg 187
|||||||
Sbjct: 20786 gctagtg 20780

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,214,282,917
Number of extensions: 77947251
Number of successful extensions: 7041597
Number of sequences better than 10.0: 359
Length of query: 1028
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1004
Effective length of database: 97,308,875,965
Effective search space: 97698111468860
Effective search space used: 97698111468860
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.27
Homology vs Protein
Query= Contig-U10389-1 (Contig-U10389-1Q) /CSM_Contig/Contig-U10389-1Q.Seq.d
(1028 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q556G4) RecName: Full=Deoxyhypusine hydroxylase; EC=1.... 590 e-167
BX004774_5(BX004774|pid:none) Zebrafish DNA sequence from clone ... 283 5e-75
DQ990881_1(DQ990881|pid:none) Bos taurus clone 20N deoxyhypusine... 283 9e-75
(Q0VC53) RecName: Full=Deoxyhypusine hydroxylase; EC=1.... 282 1e-74
(Q5PPJ4) RecName: Full=Deoxyhypusine hydroxylase; EC=1.... 282 1e-74
BC158896_1(BC158896|pid:none) Xenopus tropicalis hypothetical pr... 281 3e-74
DQ990883_1(DQ990883|pid:none) Bos taurus clone 68 deoxyhypusine ... 280 6e-74
(Q5ZIP3) RecName: Full=Deoxyhypusine hydroxylase; EC=1.... 278 3e-73
BC002295_1(BC002295|pid:none) Mus musculus deoxyhypusine hydroxy... 276 6e-73
(Q17949) RecName: Full=Deoxyhypusine hydroxylase; EC=1.... 271 2e-71
BT074681_1(BT074681|pid:none) Osmerus mordax clone omor-rgc-511-... 270 5e-71
EU978455_1(EU978455|pid:none) Bombyx mori lethal s1921 mRNA, com... 259 1e-67
BT033368_1(BT033368|pid:none) Zea mays full-length cDNA clone ZM... 250 6e-65
(Q94JW0) RecName: Full=Deoxyhypusine hydroxylase; EC=1.... 249 1e-64
EU976544_1(EU976544|pid:none) Zea mays clone 981163 HEAT-like mR... 241 4e-62
(Q2QXB3) RecName: Full=Deoxyhypusine hydroxylase-A; EC=... 238 3e-61
(Q6BKA6) RecName: Full=Deoxyhypusine hydroxylase; Short... 237 6e-61
(Q2QLW3) RecName: Full=Deoxyhypusine hydroxylase-B; EC=... 236 1e-60
AP008218_1413(AP008218|pid:none) Oryza sativa (japonica cultivar... 236 1e-60
EF084002_1(EF084002|pid:none) Picea sitchensis clone WS0274_N15 ... 235 2e-60
(Q59Z14) RecName: Full=Deoxyhypusine hydroxylase; Short... 231 3e-59
FM992689_658(FM992689|pid:none) Candida dubliniensis CD36 chromo... 229 1e-58
BT076794_1(BT076794|pid:none) Caligus rogercresseyi clone crog-e... 227 4e-58
CU638743_303(CU638743|pid:none) Podospora anserina genomic DNA c... 224 5e-57
(Q9P6K9) RecName: Full=Deoxyhypusine hydroxylase; Short... 223 8e-57
(Q96WP5) RecName: Full=Deoxyhypusine hydroxylase; Short... 223 1e-56
(A2QXL3) RecName: Full=Deoxyhypusine hydroxylase; Short... 218 2e-55
BT078653_1(BT078653|pid:none) Lepeophtheirus salmonis clone lsal... 216 8e-55
(Q5AW32) RecName: Full=Deoxyhypusine hydroxylase; Short... 216 1e-54
CU928167_92(CU928167|pid:none) Kluyveromyces thermotolerans stra... 212 2e-53
AM920437_912(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 208 3e-52
(Q6CV81) RecName: Full=Deoxyhypusine hydroxylase; Short... 206 8e-52
(Q0UHL8) RecName: Full=Deoxyhypusine hydroxylase; Short... 205 2e-51
(Q1E9L2) RecName: Full=Deoxyhypusine hydroxylase; Short... 203 7e-51
CU928179_79(CU928179|pid:none) Zygosaccharomyces rouxii strain C... 201 3e-50
(Q5K8K5) RecName: Full=Deoxyhypusine hydroxylase; Short... 200 8e-50
BT055708_1(BT055708|pid:none) Zea mays full-length cDNA clone ZM... 199 2e-49
FN357443_11(FN357443|pid:none) Schistosoma mansoni genome sequen... 194 4e-48
AK080664_1(AK080664|pid:none) Mus musculus 10 days neonate corte... 190 6e-47
(Q752Z8) RecName: Full=Deoxyhypusine hydroxylase; Short... 189 1e-46
AM494963_184(AM494963|pid:none) Leishmania braziliensis chromoso... 183 1e-44
CP001328_437(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 181 5e-44
(Q4PHU4) RecName: Full=Deoxyhypusine hydroxylase; Short... 179 1e-43
AM502244_190(AM502244|pid:none) Leishmania infantum chromosome 26. 179 2e-43
AC005551_5(AC005551|pid:none) Homo sapiens chromosome 19, cosmid... 174 4e-42
AK004052_1(AK004052|pid:none) Mus musculus 18-day embryo whole b... 161 3e-38
CR940347_525(CR940347|pid:none) Theileria annulata strain Ankara... 150 5e-35
AF028592_1(AF028592|pid:none) Babesia bovis unknown mRNA, partia... 138 3e-31
EU370547_1(EU370547|pid:none) Ovis aries deoxyhypusine hydroxyla... 129 2e-28
BT087984_1(BT087984|pid:none) Zea mays full-length cDNA clone ZM... 120 6e-26
BT051877_1(BT051877|pid:none) Medicago truncatula clone MTYF5_F6... 118 4e-25
AL844509_26(AL844509|pid:none) Plasmodium falciparum 3D7 chromos... 106 1e-21
CP000393_1567(CP000393|pid:none) Trichodesmium erythraeum IMS101... 91 5e-17
CP000686_3308(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 86 2e-15
AB2239(AB2239) hypothetical protein all3465 [imported] - Nostoc ... 83 1e-14
AL162507_23(AL162507|pid:none) Arabidopsis thaliana DNA chromoso... 83 2e-14
AF370303_1(AF370303|pid:none) Arabidopsis thaliana unknown prote... 83 2e-14
CP000117_3489(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 82 2e-14
AE010299_1790(AE010299|pid:none) Methanosarcina acetivorans str.... 81 7e-14
CP000300_619(CP000300|pid:none) Methanococcoides burtonii DSM 62... 81 7e-14
AM778954_103(AM778954|pid:none) Microcystis aeruginosa PCC 7806 ... 81 7e-14
CP000866_1247(CP000866|pid:none) Nitrosopumilus maritimus SCM1, ... 75 4e-12
EU016592_30(EU016592|pid:none) Uncultured Group I marine crenarc... 68 6e-10
AE010299_3513(AE010299|pid:none) Methanosarcina acetivorans str.... 67 1e-09
CP000780_115(CP000780|pid:none) Candidatus Methanoregula boonei ... 66 2e-09
AM778954_100(AM778954|pid:none) Microcystis aeruginosa PCC 7806 ... 66 2e-09
AM114193_869(AM114193|pid:none) Uncultured methanogenic archaeon... 65 3e-09
CP000099_1764(CP000099|pid:none) Methanosarcina barkeri str. Fus... 65 5e-09
CP000686_1683(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 64 6e-09
AE008384_504(AE008384|pid:none) Methanosarcina mazei strain Goe1... 64 6e-09
AE010299_4481(AE010299|pid:none) Methanosarcina acetivorans str.... 62 3e-08
BT051878_1(BT051878|pid:none) Medicago truncatula clone MTYF5_F6... 62 4e-08
AE000666_1678(AE000666|pid:none) Methanothermobacter thermautotr... 61 5e-08
CP000099_911(CP000099|pid:none) Methanosarcina barkeri str. Fusa... 60 9e-08
AP009153_986(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DNA... 58 6e-07
AE017333_2214(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 57 1e-06
CP000099_2919(CP000099|pid:none) Methanosarcina barkeri str. Fus... 56 2e-06
CP000806_3382(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 55 4e-06
AE008384_490(AE008384|pid:none) Methanosarcina mazei strain Goe1... 54 9e-06
AP006627_2034(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 54 9e-06
CP000557_1654(CP000557|pid:none) Geobacillus thermodenitrificans... 53 1e-05
AE016879_1992(AE016879|pid:none) Bacillus anthracis str. Ames, c... 53 2e-05
CP000227_2041(CP000227|pid:none) Bacillus cereus Q1, complete ge... 53 2e-05
CP000562_2117(CP000562|pid:none) Methanoculleus marisnigri JR1, ... 53 2e-05
(P54169) RecName: Full=Uncharacterized protein ypgR; &AL009126_... 53 2e-05
CP000903_1965(CP000903|pid:none) Bacillus weihenstephanensis KBA... 52 3e-05
CP001287_902(CP001287|pid:none) Cyanothece sp. PCC 8801, complet... 52 3e-05
CP001283_2104(CP001283|pid:none) Bacillus cereus AH820, complete... 52 3e-05
AE017194_2215(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 52 4e-05
CP000682_300(CP000682|pid:none) Metallosphaera sedula DSM 5348, ... 51 6e-05
AE015451_209(AE015451|pid:none) Pseudomonas putida KT2440 comple... 51 6e-05
AE010299_3501(AE010299|pid:none) Methanosarcina acetivorans str.... 51 6e-05
CP000562_1028(CP000562|pid:none) Methanoculleus marisnigri JR1, ... 51 6e-05
CP001338_2599(CP001338|pid:none) Candidatus Methanosphaerula pal... 51 7e-05
CP000951_1413(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 50 1e-04
CP000764_1549(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 50 1e-04
CU633750_1969(CU633750|pid:none) Cupriavidus taiwanensis str. LM... 50 1e-04
AP008231_2370(AP008231|pid:none) Synechococcus elongatus PCC 630... 50 1e-04
CP001147_2004(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 50 2e-04
CP000562_821(CP000562|pid:none) Methanoculleus marisnigri JR1, c... 49 2e-04
BA000045_2234(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 48 6e-04
CP000958_1981(CP000958|pid:none) Burkholderia cenocepacia MC0-3 ... 48 6e-04
CP000117_4051(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 47 0.001
CP001275_890(CP001275|pid:none) Thermomicrobium roseum DSM 5159,... 47 0.001
CP000780_1853(CP000780|pid:none) Candidatus Methanoregula boonei... 47 0.001
AE017226_434(AE017226|pid:none) Treponema denticola ATCC 35405, ... 46 0.002
CP001291_2505(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 46 0.002
AJ937763_15(AJ937763|pid:none) Uncultured bacterium fosmid clone... 46 0.002
CP000806_2563(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 46 0.002
CT573326_154(CT573326|pid:none) Pseudomonas entomophila str. L48... 46 0.002
CP001037_2146(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 46 0.002
CR936257_1078(CR936257|pid:none) Natronomonas pharaonis DSM 2160... 45 0.003
EU016666_6(EU016666|pid:none) Uncultured marine microorganism HF... 45 0.004
CP001292_94(CP001292|pid:none) Cyanothece sp. PCC 7424 plasmid p... 45 0.004
AK229677_1(AK229677|pid:none) Arabidopsis thaliana mRNA for hypo... 45 0.004
CP000151_2100(CP000151|pid:none) Burkholderia sp. 383 chromosome... 45 0.004
CP000254_2737(CP000254|pid:none) Methanospirillum hungatei JF-1,... 45 0.004
AY596297_1957(AY596297|pid:none) Haloarcula marismortui ATCC 430... 45 0.005
CP000866_458(CP000866|pid:none) Nitrosopumilus maritimus SCM1, c... 45 0.005
CP001037_2242(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 44 0.007
CP000688_493(CP000688|pid:none) Dehalococcoides sp. BAV1, comple... 44 0.007
FM209186_3011(FM209186|pid:none) Pseudomonas aeruginosa LESB58 c... 44 0.007
CP000949_4978(CP000949|pid:none) Pseudomonas putida W619, comple... 44 0.007
AP008231_2271(AP008231|pid:none) Synechococcus elongatus PCC 630... 44 0.009
CP000239_2648(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, com... 44 0.009
CP000240_1162(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-1... 44 0.012
CP000504_1610(CP000504|pid:none) Pyrobaculum islandicum DSM 4184... 44 0.012
BA000022_244(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA, ... 44 0.012
CP000254_3041(CP000254|pid:none) Methanospirillum hungatei JF-1,... 44 0.012
CP000393_710(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 43 0.015
CP000435_485(CP000435|pid:none) Synechococcus sp. CC9311, comple... 43 0.015
AE010299_2731(AE010299|pid:none) Methanosarcina acetivorans str.... 43 0.015
BA000045_1575(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 43 0.015
CP000254_2658(CP000254|pid:none) Methanospirillum hungatei JF-1,... 43 0.020
CP000908_3307(CP000908|pid:none) Methylobacterium extorquens PA1... 43 0.020
AE009441_1097(AE009441|pid:none) Pyrobaculum aerophilum str. IM2... 43 0.020
CP001029_4105(CP001029|pid:none) Methylobacterium populi BJ001, ... 43 0.020
BA000039_834(BA000039|pid:none) Thermosynechococcus elongatus BP... 43 0.020
CP000113_1368(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 42 0.026
CP000348_574(CP000348|pid:none) Leptospira borgpetersenii serova... 42 0.026
CP000250_1478(CP000250|pid:none) Rhodopseudomonas palustris HaA2... 42 0.026
AF1930(AF1930) hypothetical protein all0993 [imported] - Nostoc ... 42 0.026
CP000698_3083(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 42 0.034
BA000039_1994(BA000039|pid:none) Thermosynechococcus elongatus B... 42 0.034
BA000040_3198(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 42 0.034
CP001298_3523(CP001298|pid:none) Methylobacterium chloromethanic... 42 0.034
CP000239_46(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, compl... 42 0.034
AE004437_606(AE004437|pid:none) Halobacterium sp. NRC-1, complet... 42 0.045
AM778923_36(AM778923|pid:none) Microcystis aeruginosa PCC 7806 g... 42 0.045
AM747720_2049(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 42 0.045
AP009552_5679(AP009552|pid:none) Microcystis aeruginosa NIES-843... 42 0.045
AM286690_1464(AM286690|pid:none) Alcanivorax borkumensis SK2, co... 42 0.045
CP000863_1758(CP000863|pid:none) Acinetobacter baumannii ACICU, ... 41 0.059
CP000781_2784(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 41 0.059
AP009385_1919(AP009385|pid:none) Burkholderia multivorans ATCC 1... 41 0.059
CP000561_596(CP000561|pid:none) Pyrobaculum calidifontis JCM 115... 41 0.059
CP000817_2132(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 41 0.077
CP001069_318(CP001069|pid:none) Ralstonia pickettii 12J chromoso... 41 0.077
CP001390_2141(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 41 0.077
CP000501_4(CP000501|pid:none) Pichia stipitis CBS 6054 chromosom... 41 0.077
CP000780_816(CP000780|pid:none) Candidatus Methanoregula boonei ... 40 0.10
AP007255_1058(AP007255|pid:none) Magnetospirillum magneticum AMB... 40 0.13
CP000612_1708(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 40 0.13
(Q4L6D9) RecName: Full=Conserved virulence factor C; &AP006716_... 40 0.17
CP000251_3824(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 40 0.17
AP008934_939(AP008934|pid:none) Staphylococcus saprophyticus sub... 40 0.17
CP000102_151(CP000102|pid:none) Methanosphaera stadtmanae DSM 30... 39 0.22
(O94317) RecName: Full=Uncharacterized serine-rich protein C215.... 39 0.22
CP001131_3865(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 39 0.22
BA000028_505(BA000028|pid:none) Oceanobacillus iheyensis HTE831 ... 39 0.22
AE017126_340(AE017126|pid:none) Prochlorococcus marinus subsp. m... 39 0.29
CP001357_2396(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 39 0.29
CP001359_3937(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 39 0.29
(Q49XP0) RecName: Full=Conserved virulence factor C; &AP008934_... 39 0.29
CP000559_513(CP000559|pid:none) Methanocorpusculum labreanum Z, ... 39 0.29
BA000045_1255(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 39 0.29
CP001344_4536(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 39 0.38
CP001022_1990(CP001022|pid:none) Exiguobacterium sibiricum 255-1... 39 0.38
CP000521_1893(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 39 0.38
CP001124_3958(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 39 0.38
AM774415_778(AM774415|pid:none) Halobacterium salinarum complete... 39 0.38
CR380953_171(CR380953|pid:none) Candida glabrata strain CBS138 c... 38 0.50
CP001504_1817(CP001504|pid:none) Burkholderia glumae BGR1 chromo... 38 0.50
CP000240_1684(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-1... 38 0.50
AM746676_2663(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 38 0.50
(Q02178) RecName: Full=Bilin biosynthesis protein mpeV; &F45045... 38 0.65
CP001197_774(CP001197|pid:none) Desulfovibrio vulgaris str. 'Miy... 38 0.65
CP001390_3347(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 38 0.65
CP000477_733(CP000477|pid:none) Methanosaeta thermophila PT, com... 38 0.65
CP001037_1416(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 38 0.65
CP000099_2346(CP000099|pid:none) Methanosarcina barkeri str. Fus... 38 0.65
CP000473_7577(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 37 0.85
CP000393_1938(CP000393|pid:none) Trichodesmium erythraeum IMS101... 37 0.85
CR382139_130(CR382139|pid:none) Debaryomyces hansenii strain CBS... 37 1.1
CP000777_943(CP000777|pid:none) Leptospira biflexa serovar Patoc... 37 1.1
CP000027_513(CP000027|pid:none) Dehalococcoides ethenogenes 195,... 37 1.1
CP000380_612(CP000380|pid:none) Burkholderia cenocepacia AU 1054... 37 1.1
CP000142_829(CP000142|pid:none) Pelobacter carbinolicus DSM 2380... 37 1.1
CP000686_4488(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 37 1.4
(Q68F70) RecName: Full=Integrator complex subunit 4; Sh... 37 1.4
CP000852_272(CP000852|pid:none) Caldivirga maquilingensis IC-167... 37 1.4
CT971583_494(CT971583|pid:none) Synechococcus WH7803 complete ge... 37 1.4
CP001344_1822(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 36 1.9
AC011765_4(AC011765|pid:none) Arabidopsis thaliana chromosome 1 ... 36 1.9
CR522870_2889(CR522870|pid:none) Desulfotalea psychrophila LSv54... 36 1.9
CP000553_1872(CP000553|pid:none) Prochlorococcus marinus str. NA... 36 1.9
CP000113_5648(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 36 1.9
CP000812_220(CP000812|pid:none) Thermotoga lettingae TMO, comple... 35 3.2
AK129724_1(AK129724|pid:none) Homo sapiens cDNA FLJ26213 fis, cl... 35 3.2
AE004437_742(AE004437|pid:none) Halobacterium sp. NRC-1, complet... 35 3.2
CP001358_1360(CP001358|pid:none) Desulfovibrio desulfuricans sub... 35 3.2
CP000089_2315(CP000089|pid:none) Dechloromonas aromatica RCB, co... 35 3.2
CP000140_1121(CP000140|pid:none) Parabacteroides distasonis ATCC... 35 3.2
CP000909_3260(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 35 3.2
CP001037_859(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 35 3.2
CP001131_258(CP001131|pid:none) Anaeromyxobacter sp. K, complete... 35 3.2
AL672112_79(AL672112|pid:none) Mesorhizobium loti R7A symbiosis ... 35 4.2
AL844505_133(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 35 4.2
(O13828) RecName: Full=mRNA decapping complex subunit 2; ... 35 4.2
AE017126_1631(AE017126|pid:none) Prochlorococcus marinus subsp. ... 35 4.2
FM201303_1(FM201303|pid:none) Colletotrichum higginsianum kap1 g... 35 4.2
CP001037_3385(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 35 4.2
AC2179(AC2179) hypothetical protein alr2986 [imported] - Nostoc ... 35 4.2
BA000022_1800(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 35 5.5
M73548_2(M73548|pid:none) Human polyposis locus (DP2.5 gene) mRN... 35 5.5
CP001025_1868(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 35 5.5
AF349510_1(AF349510|pid:none) Aspergillus terreus general amidas... 35 5.5
AE017180_2204(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 35 5.5
AY552548_7(AY552548|pid:none) Fremyella diplosiphon TspO-like pr... 35 5.5
CP000505_1213(CP000505|pid:none) Thermofilum pendens Hrk 5, comp... 35 5.5
EF462416_1(EF462416|pid:none) Danio rerio clone 2775 myeloid/lym... 34 7.2
CP000271_2027(CP000271|pid:none) Burkholderia xenovorans LB400 c... 34 7.2
CP000686_3878(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 34 7.2
AY509253_25(AY509253|pid:none) Ostreid herpesvirus 1, complete g... 34 7.2
BC084088_1(BC084088|pid:none) Xenopus laevis hypothetical LOC495... 34 7.2
CP000240_918(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-13... 34 7.2
CP000859_1934(CP000859|pid:none) Desulfococcus oleovorans Hxd3, ... 34 9.4
AY197576_4(AY197576|pid:none) Myxococcus xanthus isolate 878-107... 34 9.4
CP000473_2582(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 34 9.4
CP000477_1149(CP000477|pid:none) Methanosaeta thermophila PT, co... 34 9.4
AK129201_1(AK129201|pid:none) Mus musculus mRNA for mKIAA0728 pr... 34 9.4
CP000850_3089(CP000850|pid:none) Salinispora arenicola CNS-205, ... 34 9.4
CP000473_1329(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 34 9.4

>(Q556G4) RecName: Full=Deoxyhypusine hydroxylase;
EC=1.14.99.29; AltName: Full=Deoxyhypusine
monooxygenase; AltName: Full=Deoxyhypusine dioxygenase;
&AC116984_9(AC116984|pid:none)
Length = 315

Score = 590 bits (1522), Expect = e-167
Identities = 301/301 (100%), Positives = 301/301 (100%)
Frame = +1

Query: 73 NGLKETLTDVSQPIAKRFRSLFTLRNLNGPLCIDAMASALNDKSALLRHEIAYCLGQMED 252
NGLKETLTDVSQPIAKRFRSLFTLRNLNGPLCIDAMASALNDKSALLRHEIAYCLGQMED
Sbjct: 10 NGLKETLTDVSQPIAKRFRSLFTLRNLNGPLCIDAMASALNDKSALLRHEIAYCLGQMED 69

Query: 253 EYALKVLIDLVKNSDEHPMVRHEAAEALGAIGSESAHKTLKEYSNDPVREVSETCQLALS 432
EYALKVLIDLVKNSDEHPMVRHEAAEALGAIGSESAHKTLKEYSNDPVREVSETCQLALS
Sbjct: 70 EYALKVLIDLVKNSDEHPMVRHEAAEALGAIGSESAHKTLKEYSNDPVREVSETCQLALS 129

Query: 433 RVEWYEKNKPETEEDKMYMSVDPAPPLKKGSVSRDELRSKFLDSNLDIFNRYRALFSLRD 612
RVEWYEKNKPETEEDKMYMSVDPAPPLKKGSVSRDELRSKFLDSNLDIFNRYRALFSLRD
Sbjct: 130 RVEWYEKNKPETEEDKMYMSVDPAPPLKKGSVSRDELRSKFLDSNLDIFNRYRALFSLRD 189

Query: 613 IGDEQSVLALCDGLKDQSSALLRHEVAFVLGQLQHRVAIDPLTTCVLDESENAMVRHEAA 792
IGDEQSVLALCDGLKDQSSALLRHEVAFVLGQLQHRVAIDPLTTCVLDESENAMVRHEAA
Sbjct: 190 IGDEQSVLALCDGLKDQSSALLRHEVAFVLGQLQHRVAIDPLTTCVLDESENAMVRHEAA 249

Query: 793 EALGAIASTETIPLLEKLLQDKEPIVSESCAVALDVTEYFNNTESFQYADGIKILLEKNL 972
EALGAIASTETIPLLEKLLQDKEPIVSESCAVALDVTEYFNNTESFQYADGIKILLEKNL
Sbjct: 250 EALGAIASTETIPLLEKLLQDKEPIVSESCAVALDVTEYFNNTESFQYADGIKILLEKNL 309

Query: 973 V 975
V
Sbjct: 310 V 310

Lambda K H
0.317 0.132 0.372

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,342,790,268
Number of extensions: 23610394
Number of successful extensions: 70456
Number of sequences better than 10.0: 243
Number of HSP's gapped: 69807
Number of HSP's successfully gapped: 449
Length of query: 342
Length of database: 1,040,966,779
Length adjustment: 129
Effective length of query: 213
Effective length of database: 627,614,014
Effective search space: 133681784982
Effective search space used: 133681784982
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.41 alm: 0.44 top: 0.53 tms: 0.00 mit: 0.21 mip: 0.00
nuc: 0.03 erl: 0.00 erm: 0.40 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

36.0 %: nuclear
32.0 %: cytoplasmic
16.0 %: mitochondrial
8.0 %: vacuolar
4.0 %: endoplasmic reticulum
4.0 %: peroxisomal

>> prediction for Contig-U10389-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 2
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0