Contig-U10389-1 |
Contig ID |
Contig-U10389-1 |
Contig update |
2002. 9.13 |
Contig sequence |
|
Gap |
no gap |
Contig length |
1028 |
Chromosome number (1..6, M) |
2 |
Chromosome length |
8467578 |
Start point |
3728528 |
End point |
3729557 |
Strand (PLUS/MINUS) |
PLUS |
Number of clones |
2 |
Number of EST |
2 |
Link to clone list |
U10389 |
List of clone(s) |
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.10 |
Homology vs CSM-cDNA |
|
dna update |
2008.11.19 |
Homology vs DNA |
Query= Contig-U10389-1 (Contig-U10389-1Q) /CSM_Contig/Contig-U10389-1Q.Seq.d (1028 letters)
Database: ddbj_A 92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 1505 0.0 1 (BJ433667) Dictyostelium discoideum cDNA clone:ddv22g17, 3' ... 1273 0.0 1 (BJ415439) Dictyostelium discoideum cDNA clone:ddv22g17, 5' ... 1138 0.0 1 (BJ428231) Dictyostelium discoideum cDNA clone:ddv11o04, 3' ... 303 9e-86 3 (EE674390) EST1494 Mycelia Grown in Nitrogen Limited Media C... 50 1e-10 4 (BI502500) kt75g11.y3 Strongyloides ratti L2 pAMP1 v1 Chiape... 56 2e-07 2 (DW248425) pOP-EON00735_EST_C_1_pSK_SK EON (Oil Palm Embryoi... 42 3e-07 3 (DW248558) pOP-EON00882_EST_C_1_pSK_SK EON (Oil Palm Embryoi... 42 4e-07 3 (DW248755) pOP-EON01109_EST_C_1_pSK_SK EON (Oil Palm Embryoi... 42 4e-07 3 (DW248300) pOP-EON00599_EST_C_1_pSK_SK EON (Oil Palm Embryoi... 42 4e-07 3 (BE224154) kp55g04.y1 TBN95TM-SSFH Strongyloides stercoralis... 56 7e-07 2 (DY452092) PCAA-aaa108d14.g2 UCI-12 Podocoryne carnea cDNA 5... 54 3e-06 2 (FE265224) CAZO4350.rev CAZO Naegleria gruberi Flagellate St... 50 3e-06 2 (EU247113) Lycosa singoriensis deoxyhypusine hydroxylase-lik... 46 2e-05 2 (BI742499) kt51f12.y4 Strongyloides ratti L1 pAMP1 v3 Chiape... 48 4e-05 2 (CD147357) ML1-0007T-V076-E08-U.B ML1-0007 Schistosoma manso... 46 4e-05 3 (CD097341) ME1-0014T-M119-H01-U.G ME1-0014 Schistosoma manso... 46 4e-05 3 (CD097277) ME1-0014T-M119-A11-U.G ME1-0014 Schistosoma manso... 46 4e-05 3 (CD147604) ML1-0007T-V110-D04-U.B ML1-0007 Schistosoma manso... 46 4e-05 3 (CD131953) MG1-0015T-R269-A05-U.G MG1-0015 Schistosoma manso... 46 5e-05 3 (FC815925) Sr_pAMT7_04j13_T7 S. ratti mixed stage pAMP Stron... 48 5e-05 2 (DW248512) pOP-EON00834_EST_C_1_pSK_SK EON (Oil Palm Embryoi... 42 1e-04 3 (CJ391427) Molgula tectiformis cDNA, gonad clone:mtgd016k11,... 46 0.002 2 (FC810502) Sr_pASP6_04j13_SP6 S. ratti mixed stage pAMP Stro... 48 0.003 2 (AW055793) SWAMCAC38C08SK Brugia malayi adult male cDNA (SAW... 54 0.011 1 (EJ380911) 1092963761641 Global-Ocean-Sampling_GS-28-01-01-1... 40 0.034 2 (EI053027) hhd0015bc08.g1 hhd Oryza coarctata genomic clone ... 52 0.042 1 (AM098523) Lutzomyia longipalpis EST clone NSFM-131e07, sequ... 52 0.042 1 (BX255881) Zebrafish DNA sequence from clone CH211-268E23 in... 42 0.042 3 (AC004153) Plasmodium falciparum chromosome 12 clone 3D7, **... 36 0.051 8 (BU776436) SJECMH07 SJE Schistosoma japonicum cDNA similar t... 48 0.12 2 (ES225148) MpSG_ag2_C21 Myzus persicae, tobacco lineage, aph... 38 0.12 2 (BU776261) SJECLB11 SJE Schistosoma japonicum cDNA similar t... 48 0.12 2 (BU772766) SJEFDF05 SJE Schistosoma japonicum cDNA, mRNA seq... 48 0.12 2 (ES223186) MpHnorm_ag2_E21 Myzus persicae, tobacco lineage, ... 38 0.13 2 (DW010897) w12b13_M13F Myzus persicae, tobacco lineage, whol... 38 0.14 2 (CR382398) Plasmodium falciparum chromosome 6, complete sequ... 36 0.14 10 (EA743440) Sequence 14886 from patent US 7368527. 50 0.17 1 (AP002985) Homo sapiens genomic DNA, chromosome 11q clone:CT... 50 0.17 1 (AP001574) Homo sapiens genomic DNA, chromosome 8q23, clone:... 50 0.17 1 (AL513024) Human DNA sequence from clone RP11-555B19 on chro... 50 0.17 1 (AC025647) Homo sapiens, clone RP11-316J7, complete sequence. 50 0.17 1 (AF235095) Homo sapiens chromosome 8 clone CTA-388H9 map 8q2... 50 0.17 1 (AC013608) Homo sapiens clone RP11-10G10, WORKING DRAFT SEQU... 50 0.17 1 (ES274168) AJAD-aaa10e11.g1 Aph cDNA-BeetSlice Aphanomyces c... 50 0.17 1 (DW438690) HHAGE037420 Human liver regeneration after partia... 50 0.17 1 (FG114137) PRAG-aab59a07.g1 Sand_fly_EST_Normalized Phleboto... 50 0.17 1 (EY211476) PRAG-aab13h08.g1 Sand_fly_EST_Normalized Phleboto... 50 0.17 1 (EY209720) PRAG-aaa45e08.g1 Sand_fly_EST_Normalized Phleboto... 50 0.17 1 (BB536979) Mus musculus 0 day neonate eyeball cDNA, RIKEN fu... 46 0.21 2 (BU769991) SJECRB01 SJE Schistosoma japonicum cDNA similar t... 48 0.22 2 (ER338290) 1092344324927 Global-Ocean-Sampling_GS-34-01-01-1... 36 0.24 3 (AY816141) Schistosoma japonicum SJCHGC06636 protein mRNA, c... 48 0.26 2 (CD119692) ME1-0055T-R241-B12-U.G ME1-0055 Schistosoma manso... 40 0.27 2 (AC208397) Macaca mulatta chromosome 1 clone CH250-347K17, W... 34 0.37 2 (EY401394) pOP-CNH01999_EST_C_1_pSK_SK CNH (Oil Palm Non-Emb... 38 0.39 2 (DC233256) Plasmodium berghei strain ANKA cDNA clone:SG02711... 40 0.43 2 (DR108926) USDA-FP_166186 5th-instar Anoplophora glabripenni... 46 0.51 2 (CD079989) MA3-9999U-M292-C04-U.B MA3-0001 Schistosoma manso... 40 0.52 2 (ER319584) 1092344168188 Global-Ocean-Sampling_GS-34-01-01-1... 44 0.56 2 (EY400326) pOP-CNH04936_EST_C_1_pSK_SK CNH (Oil Palm Non-Emb... 38 0.57 2 (AM043871) Schistosoma mansoni lung schistosomulum EST, clon... 40 0.59 2 (BX004814) Zebrafish DNA sequence from clone CH211-103I6 in ... 48 0.66 1 (CU207345) CH251-254C10, complete sequence. 48 0.66 1 (U31961) Drosophila melanogaster bithorax complex (BX-C), co... 48 0.66 1 (L07835) Drosophila melanogaster (clone DS07696) Abd-B gene. 48 0.66 1 (AE014297) Drosophila melanogaster chromosome 3R, complete s... 48 0.66 1 (AC095018) Drosophila melanogaster clone BACR24L18, complete... 48 0.66 1 (AC091636) Drosophila melanogaster, chromosome 3R, region 89... 48 0.66 1 (AL161722) Human DNA sequence from clone RP11-497J7 on chrom... 48 0.66 1 (CU693485) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.66 1 (AC215569) Pteropus vampyrus clone CH279-57K23, WORKING DRAF... 48 0.66 1 (AC211900) Pongo abelii chromosome UNKNOWN clone CH276-409I1... 48 0.66 1 (AC200704) Pan troglodytes chromosome X clone CH251-593M13, ... 48 0.66 1 (AC020384) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 48 0.66 1 (ER313768) 1092344121548 Global-Ocean-Sampling_GS-34-01-01-1... 48 0.66 1 (EJ919144) 1093018591477 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.66 1 (EJ824630) 1093017554189 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.66 1 (EJ770384) 1092966001683 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.66 1 (EJ492887) 1095403550969 Global-Ocean-Sampling_GS-28-01-01-1... 48 0.66 1 (DE364535) Bombyx mori genomic DNA, BAC clone:BET_611_C02. 48 0.66 1 (CL586409) OB__Ba0083E10.r OB__Ba Oryza brachyantha genomic ... 48 0.66 1 (CL560826) OB__Ba0018J19.f OB__Ba Oryza brachyantha genomic ... 48 0.66 1 (EE275814) PMAO-aac87a12.g1 Lamprey_EST_Embryo Petromyzon ma... 48 0.66 1 (DB798915) Sus scrofa mRNA, clone:DCI010105G05, 5' end, expr... 48 0.66 1 (BU766316) SJEACH01 SJE Schistosoma japonicum cDNA similar t... 48 0.66 1 (BH148669) ENTQO84TR Entamoeba histolytica Sheared DNA Entam... 46 0.69 2 (AC189475) Brassica rapa subsp. pekinensis clone KBrB080J22,... 40 0.98 5 (BZ458708) BONRS96TR BO_1.6_2_KB_tot Brassica oleracea genom... 34 1.2 3 (CK409301) AUF_IfLvr_222_b13 Ictalurus furcatus liver cDNA l... 32 1.3 3 (CU856350) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 1.3 2 (AC147975) Pan troglodytes BAC clone CH251-510J15 from chrom... 32 1.3 2 (AC192126) Pan troglodytes BAC clone CH251-628B7 from chromo... 32 1.3 2 (AC037195) Homo sapiens chromosome 3p clone RP11-377l18, WOR... 32 1.4 2 (CR932037) Zebrafish DNA sequence from clone DKEYP-44B3 in l... 44 1.4 2 (AC011229) Homo sapiens BAC clone CTD-2004K7 from 7, complet... 32 1.4 2 (BU770236) SJECTG11 SJE Schistosoma japonicum cDNA, mRNA seq... 44 1.4 2 (AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 32 1.4 12 (AC173251) Bos taurus clone CH240-411M5, WORKING DRAFT SEQUE... 46 1.4 6 (AC004349) Drosophila melanogaster DNA sequence (P1 DS04327 ... 32 1.4 7
>(AC116984) Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence. Length = 541399
Score = 1505 bits (759), Expect = 0.0 Identities = 759/759 (100%) Strand = Plus / Minus
Query: 187 gcattaaatgataaatcagcattattaagacatgaaattgcatattgtttaggacaaatg 246 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20699 gcattaaatgataaatcagcattattaagacatgaaattgcatattgtttaggacaaatg 20640
Query: 247 gaagatgaatatgcattaaaagttttaattgatttagtaaagaatagtgatgaacatcca 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20639 gaagatgaatatgcattaaaagttttaattgatttagtaaagaatagtgatgaacatcca 20580
Query: 307 atggtacgtcatgaagcagcagaggcattaggagcaattggtagtgaaagtgctcataaa 366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20579 atggtacgtcatgaagcagcagaggcattaggagcaattggtagtgaaagtgctcataaa 20520
Query: 367 acattgaaagagtattcaaatgatccagttagagaggttagtgaaacttgtcaattggca 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20519 acattgaaagagtattcaaatgatccagttagagaggttagtgaaacttgtcaattggca 20460
Query: 427 ttatcaagagttgaatggtatgaaaagaataaaccagaaacagaagaggataaaatgtat 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20459 ttatcaagagttgaatggtatgaaaagaataaaccagaaacagaagaggataaaatgtat 20400
Query: 487 atgtcagtagacccagctccaccacttaaaaaaggatctgttagcagagacgaattaaga 546 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20399 atgtcagtagacccagctccaccacttaaaaaaggatctgttagcagagacgaattaaga 20340
Query: 547 tcaaaatttttagattcaaatttagatattttcaatcgttatagagcattattttcatta 606 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20339 tcaaaatttttagattcaaatttagatattttcaatcgttatagagcattattttcatta 20280
Query: 607 cgtgatattggtgatgaacaatctgttctcgccttatgcgatggtttaaaagatcaatct 666 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20279 cgtgatattggtgatgaacaatctgttctcgccttatgcgatggtttaaaagatcaatct 20220
Query: 667 tcagctttactcagacatgaggttgcctttgttttaggtcaattacaacatcgtgtagct 726 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20219 tcagctttactcagacatgaggttgcctttgttttaggtcaattacaacatcgtgtagct 20160
Query: 727 attgatccattaacaacttgtgttttagatgaatctgaaaatgcaatggtacgtcatgaa 786 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20159 attgatccattaacaacttgtgttttagatgaatctgaaaatgcaatggtacgtcatgaa 20100
Query: 787 gctgctgaagctttgggcgcaatcgcttcaactgaaactatcccattattagagaaatta 846 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20099 gctgctgaagctttgggcgcaatcgcttcaactgaaactatcccattattagagaaatta 20040
Query: 847 ttacaagataaagaaccaatcgttagtgaatcttgtgctgtagctttagatgtaactgaa 906 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20039 ttacaagataaagaaccaatcgttagtgaatcttgtgctgtagctttagatgtaactgaa 19980
Query: 907 tattttaataatactgaatcttttcaatatgctgatggt 945 ||||||||||||||||||||||||||||||||||||||| Sbjct: 19979 tattttaataatactgaatcttttcaatatgctgatggt 19941
Score = 371 bits (187), Expect = 4e-98 Identities = 187/187 (100%) Strand = Plus / Minus
Query: 1 taacactcttttaatcaatctaaaaatatatataaataaataaccatggttgttgttact 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20966 taacactcttttaatcaatctaaaaatatatataaataaataaccatggttgttgttact 20907
Query: 61 gaagaaattgtaaatggattaaaagaaacattaacagatgtttcacaaccaattgctaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20906 gaagaaattgtaaatggattaaaagaaacattaacagatgtttcacaaccaattgctaaa 20847
Query: 121 agatttagatcattatttacattaagaaatttaaatggaccattatgtattgatgctatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20846 agatttagatcattatttacattaagaaatttaaatggaccattatgtattgatgctatg 20787
Query: 181 gctagtg 187 ||||||| Sbjct: 20786 gctagtg 20780
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 92845959 Number of Hits to DB: 1,214,282,917 Number of extensions: 77947251 Number of successful extensions: 7041597 Number of sequences better than 10.0: 359 Length of query: 1028 Length of database: 95,242,211,685 Length adjustment: 24 Effective length of query: 1004 Effective length of database: 97,308,875,965 Effective search space: 97698111468860 Effective search space used: 97698111468860 X1: 11 (21.8 bits) S2: 22 (44.1 bits)
|
protein update |
2009. 6.27 |
Homology vs Protein |
Query= Contig-U10389-1 (Contig-U10389-1Q) /CSM_Contig/Contig-U10389-1Q.Seq.d (1028 letters)
Database: nrp_A 3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
(Q556G4) RecName: Full=Deoxyhypusine hydroxylase; EC=1.... 590 e-167 BX004774_5(BX004774|pid:none) Zebrafish DNA sequence from clone ... 283 5e-75 DQ990881_1(DQ990881|pid:none) Bos taurus clone 20N deoxyhypusine... 283 9e-75 (Q0VC53) RecName: Full=Deoxyhypusine hydroxylase; EC=1.... 282 1e-74 (Q5PPJ4) RecName: Full=Deoxyhypusine hydroxylase; EC=1.... 282 1e-74 BC158896_1(BC158896|pid:none) Xenopus tropicalis hypothetical pr... 281 3e-74 DQ990883_1(DQ990883|pid:none) Bos taurus clone 68 deoxyhypusine ... 280 6e-74 (Q5ZIP3) RecName: Full=Deoxyhypusine hydroxylase; EC=1.... 278 3e-73 BC002295_1(BC002295|pid:none) Mus musculus deoxyhypusine hydroxy... 276 6e-73 (Q17949) RecName: Full=Deoxyhypusine hydroxylase; EC=1.... 271 2e-71 BT074681_1(BT074681|pid:none) Osmerus mordax clone omor-rgc-511-... 270 5e-71 EU978455_1(EU978455|pid:none) Bombyx mori lethal s1921 mRNA, com... 259 1e-67 BT033368_1(BT033368|pid:none) Zea mays full-length cDNA clone ZM... 250 6e-65 (Q94JW0) RecName: Full=Deoxyhypusine hydroxylase; EC=1.... 249 1e-64 EU976544_1(EU976544|pid:none) Zea mays clone 981163 HEAT-like mR... 241 4e-62 (Q2QXB3) RecName: Full=Deoxyhypusine hydroxylase-A; EC=... 238 3e-61 (Q6BKA6) RecName: Full=Deoxyhypusine hydroxylase; Short... 237 6e-61 (Q2QLW3) RecName: Full=Deoxyhypusine hydroxylase-B; EC=... 236 1e-60 AP008218_1413(AP008218|pid:none) Oryza sativa (japonica cultivar... 236 1e-60 EF084002_1(EF084002|pid:none) Picea sitchensis clone WS0274_N15 ... 235 2e-60 (Q59Z14) RecName: Full=Deoxyhypusine hydroxylase; Short... 231 3e-59 FM992689_658(FM992689|pid:none) Candida dubliniensis CD36 chromo... 229 1e-58 BT076794_1(BT076794|pid:none) Caligus rogercresseyi clone crog-e... 227 4e-58 CU638743_303(CU638743|pid:none) Podospora anserina genomic DNA c... 224 5e-57 (Q9P6K9) RecName: Full=Deoxyhypusine hydroxylase; Short... 223 8e-57 (Q96WP5) RecName: Full=Deoxyhypusine hydroxylase; Short... 223 1e-56 (A2QXL3) RecName: Full=Deoxyhypusine hydroxylase; Short... 218 2e-55 BT078653_1(BT078653|pid:none) Lepeophtheirus salmonis clone lsal... 216 8e-55 (Q5AW32) RecName: Full=Deoxyhypusine hydroxylase; Short... 216 1e-54 CU928167_92(CU928167|pid:none) Kluyveromyces thermotolerans stra... 212 2e-53 AM920437_912(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 208 3e-52 (Q6CV81) RecName: Full=Deoxyhypusine hydroxylase; Short... 206 8e-52 (Q0UHL8) RecName: Full=Deoxyhypusine hydroxylase; Short... 205 2e-51 (Q1E9L2) RecName: Full=Deoxyhypusine hydroxylase; Short... 203 7e-51 CU928179_79(CU928179|pid:none) Zygosaccharomyces rouxii strain C... 201 3e-50 (Q5K8K5) RecName: Full=Deoxyhypusine hydroxylase; Short... 200 8e-50 BT055708_1(BT055708|pid:none) Zea mays full-length cDNA clone ZM... 199 2e-49 FN357443_11(FN357443|pid:none) Schistosoma mansoni genome sequen... 194 4e-48 AK080664_1(AK080664|pid:none) Mus musculus 10 days neonate corte... 190 6e-47 (Q752Z8) RecName: Full=Deoxyhypusine hydroxylase; Short... 189 1e-46 AM494963_184(AM494963|pid:none) Leishmania braziliensis chromoso... 183 1e-44 CP001328_437(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 181 5e-44 (Q4PHU4) RecName: Full=Deoxyhypusine hydroxylase; Short... 179 1e-43 AM502244_190(AM502244|pid:none) Leishmania infantum chromosome 26. 179 2e-43 AC005551_5(AC005551|pid:none) Homo sapiens chromosome 19, cosmid... 174 4e-42 AK004052_1(AK004052|pid:none) Mus musculus 18-day embryo whole b... 161 3e-38 CR940347_525(CR940347|pid:none) Theileria annulata strain Ankara... 150 5e-35 AF028592_1(AF028592|pid:none) Babesia bovis unknown mRNA, partia... 138 3e-31 EU370547_1(EU370547|pid:none) Ovis aries deoxyhypusine hydroxyla... 129 2e-28 BT087984_1(BT087984|pid:none) Zea mays full-length cDNA clone ZM... 120 6e-26 BT051877_1(BT051877|pid:none) Medicago truncatula clone MTYF5_F6... 118 4e-25 AL844509_26(AL844509|pid:none) Plasmodium falciparum 3D7 chromos... 106 1e-21 CP000393_1567(CP000393|pid:none) Trichodesmium erythraeum IMS101... 91 5e-17 CP000686_3308(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 86 2e-15 AB2239(AB2239) hypothetical protein all3465 [imported] - Nostoc ... 83 1e-14 AL162507_23(AL162507|pid:none) Arabidopsis thaliana DNA chromoso... 83 2e-14 AF370303_1(AF370303|pid:none) Arabidopsis thaliana unknown prote... 83 2e-14 CP000117_3489(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 82 2e-14 AE010299_1790(AE010299|pid:none) Methanosarcina acetivorans str.... 81 7e-14 CP000300_619(CP000300|pid:none) Methanococcoides burtonii DSM 62... 81 7e-14 AM778954_103(AM778954|pid:none) Microcystis aeruginosa PCC 7806 ... 81 7e-14 CP000866_1247(CP000866|pid:none) Nitrosopumilus maritimus SCM1, ... 75 4e-12 EU016592_30(EU016592|pid:none) Uncultured Group I marine crenarc... 68 6e-10 AE010299_3513(AE010299|pid:none) Methanosarcina acetivorans str.... 67 1e-09 CP000780_115(CP000780|pid:none) Candidatus Methanoregula boonei ... 66 2e-09 AM778954_100(AM778954|pid:none) Microcystis aeruginosa PCC 7806 ... 66 2e-09 AM114193_869(AM114193|pid:none) Uncultured methanogenic archaeon... 65 3e-09 CP000099_1764(CP000099|pid:none) Methanosarcina barkeri str. Fus... 65 5e-09 CP000686_1683(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 64 6e-09 AE008384_504(AE008384|pid:none) Methanosarcina mazei strain Goe1... 64 6e-09 AE010299_4481(AE010299|pid:none) Methanosarcina acetivorans str.... 62 3e-08 BT051878_1(BT051878|pid:none) Medicago truncatula clone MTYF5_F6... 62 4e-08 AE000666_1678(AE000666|pid:none) Methanothermobacter thermautotr... 61 5e-08 CP000099_911(CP000099|pid:none) Methanosarcina barkeri str. Fusa... 60 9e-08 AP009153_986(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DNA... 58 6e-07 AE017333_2214(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 57 1e-06 CP000099_2919(CP000099|pid:none) Methanosarcina barkeri str. Fus... 56 2e-06 CP000806_3382(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 55 4e-06 AE008384_490(AE008384|pid:none) Methanosarcina mazei strain Goe1... 54 9e-06 AP006627_2034(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 54 9e-06 CP000557_1654(CP000557|pid:none) Geobacillus thermodenitrificans... 53 1e-05 AE016879_1992(AE016879|pid:none) Bacillus anthracis str. Ames, c... 53 2e-05 CP000227_2041(CP000227|pid:none) Bacillus cereus Q1, complete ge... 53 2e-05 CP000562_2117(CP000562|pid:none) Methanoculleus marisnigri JR1, ... 53 2e-05 (P54169) RecName: Full=Uncharacterized protein ypgR; &AL009126_... 53 2e-05 CP000903_1965(CP000903|pid:none) Bacillus weihenstephanensis KBA... 52 3e-05 CP001287_902(CP001287|pid:none) Cyanothece sp. PCC 8801, complet... 52 3e-05 CP001283_2104(CP001283|pid:none) Bacillus cereus AH820, complete... 52 3e-05 AE017194_2215(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 52 4e-05 CP000682_300(CP000682|pid:none) Metallosphaera sedula DSM 5348, ... 51 6e-05 AE015451_209(AE015451|pid:none) Pseudomonas putida KT2440 comple... 51 6e-05 AE010299_3501(AE010299|pid:none) Methanosarcina acetivorans str.... 51 6e-05 CP000562_1028(CP000562|pid:none) Methanoculleus marisnigri JR1, ... 51 6e-05 CP001338_2599(CP001338|pid:none) Candidatus Methanosphaerula pal... 51 7e-05 CP000951_1413(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 50 1e-04 CP000764_1549(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 50 1e-04 CU633750_1969(CU633750|pid:none) Cupriavidus taiwanensis str. LM... 50 1e-04 AP008231_2370(AP008231|pid:none) Synechococcus elongatus PCC 630... 50 1e-04 CP001147_2004(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 50 2e-04 CP000562_821(CP000562|pid:none) Methanoculleus marisnigri JR1, c... 49 2e-04 BA000045_2234(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 48 6e-04 CP000958_1981(CP000958|pid:none) Burkholderia cenocepacia MC0-3 ... 48 6e-04 CP000117_4051(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 47 0.001 CP001275_890(CP001275|pid:none) Thermomicrobium roseum DSM 5159,... 47 0.001 CP000780_1853(CP000780|pid:none) Candidatus Methanoregula boonei... 47 0.001 AE017226_434(AE017226|pid:none) Treponema denticola ATCC 35405, ... 46 0.002 CP001291_2505(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 46 0.002 AJ937763_15(AJ937763|pid:none) Uncultured bacterium fosmid clone... 46 0.002 CP000806_2563(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 46 0.002 CT573326_154(CT573326|pid:none) Pseudomonas entomophila str. L48... 46 0.002 CP001037_2146(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 46 0.002 CR936257_1078(CR936257|pid:none) Natronomonas pharaonis DSM 2160... 45 0.003 EU016666_6(EU016666|pid:none) Uncultured marine microorganism HF... 45 0.004 CP001292_94(CP001292|pid:none) Cyanothece sp. PCC 7424 plasmid p... 45 0.004 AK229677_1(AK229677|pid:none) Arabidopsis thaliana mRNA for hypo... 45 0.004 CP000151_2100(CP000151|pid:none) Burkholderia sp. 383 chromosome... 45 0.004 CP000254_2737(CP000254|pid:none) Methanospirillum hungatei JF-1,... 45 0.004 AY596297_1957(AY596297|pid:none) Haloarcula marismortui ATCC 430... 45 0.005 CP000866_458(CP000866|pid:none) Nitrosopumilus maritimus SCM1, c... 45 0.005 CP001037_2242(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 44 0.007 CP000688_493(CP000688|pid:none) Dehalococcoides sp. BAV1, comple... 44 0.007 FM209186_3011(FM209186|pid:none) Pseudomonas aeruginosa LESB58 c... 44 0.007 CP000949_4978(CP000949|pid:none) Pseudomonas putida W619, comple... 44 0.007 AP008231_2271(AP008231|pid:none) Synechococcus elongatus PCC 630... 44 0.009 CP000239_2648(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, com... 44 0.009 CP000240_1162(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-1... 44 0.012 CP000504_1610(CP000504|pid:none) Pyrobaculum islandicum DSM 4184... 44 0.012 BA000022_244(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA, ... 44 0.012 CP000254_3041(CP000254|pid:none) Methanospirillum hungatei JF-1,... 44 0.012 CP000393_710(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 43 0.015 CP000435_485(CP000435|pid:none) Synechococcus sp. CC9311, comple... 43 0.015 AE010299_2731(AE010299|pid:none) Methanosarcina acetivorans str.... 43 0.015 BA000045_1575(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 43 0.015 CP000254_2658(CP000254|pid:none) Methanospirillum hungatei JF-1,... 43 0.020 CP000908_3307(CP000908|pid:none) Methylobacterium extorquens PA1... 43 0.020 AE009441_1097(AE009441|pid:none) Pyrobaculum aerophilum str. IM2... 43 0.020 CP001029_4105(CP001029|pid:none) Methylobacterium populi BJ001, ... 43 0.020 BA000039_834(BA000039|pid:none) Thermosynechococcus elongatus BP... 43 0.020 CP000113_1368(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 42 0.026 CP000348_574(CP000348|pid:none) Leptospira borgpetersenii serova... 42 0.026 CP000250_1478(CP000250|pid:none) Rhodopseudomonas palustris HaA2... 42 0.026 AF1930(AF1930) hypothetical protein all0993 [imported] - Nostoc ... 42 0.026 CP000698_3083(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 42 0.034 BA000039_1994(BA000039|pid:none) Thermosynechococcus elongatus B... 42 0.034 BA000040_3198(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 42 0.034 CP001298_3523(CP001298|pid:none) Methylobacterium chloromethanic... 42 0.034 CP000239_46(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, compl... 42 0.034 AE004437_606(AE004437|pid:none) Halobacterium sp. NRC-1, complet... 42 0.045 AM778923_36(AM778923|pid:none) Microcystis aeruginosa PCC 7806 g... 42 0.045 AM747720_2049(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 42 0.045 AP009552_5679(AP009552|pid:none) Microcystis aeruginosa NIES-843... 42 0.045 AM286690_1464(AM286690|pid:none) Alcanivorax borkumensis SK2, co... 42 0.045 CP000863_1758(CP000863|pid:none) Acinetobacter baumannii ACICU, ... 41 0.059 CP000781_2784(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 41 0.059 AP009385_1919(AP009385|pid:none) Burkholderia multivorans ATCC 1... 41 0.059 CP000561_596(CP000561|pid:none) Pyrobaculum calidifontis JCM 115... 41 0.059 CP000817_2132(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 41 0.077 CP001069_318(CP001069|pid:none) Ralstonia pickettii 12J chromoso... 41 0.077 CP001390_2141(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 41 0.077 CP000501_4(CP000501|pid:none) Pichia stipitis CBS 6054 chromosom... 41 0.077 CP000780_816(CP000780|pid:none) Candidatus Methanoregula boonei ... 40 0.10 AP007255_1058(AP007255|pid:none) Magnetospirillum magneticum AMB... 40 0.13 CP000612_1708(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 40 0.13 (Q4L6D9) RecName: Full=Conserved virulence factor C; &AP006716_... 40 0.17 CP000251_3824(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 40 0.17 AP008934_939(AP008934|pid:none) Staphylococcus saprophyticus sub... 40 0.17 CP000102_151(CP000102|pid:none) Methanosphaera stadtmanae DSM 30... 39 0.22 (O94317) RecName: Full=Uncharacterized serine-rich protein C215.... 39 0.22 CP001131_3865(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 39 0.22 BA000028_505(BA000028|pid:none) Oceanobacillus iheyensis HTE831 ... 39 0.22 AE017126_340(AE017126|pid:none) Prochlorococcus marinus subsp. m... 39 0.29 CP001357_2396(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 39 0.29 CP001359_3937(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 39 0.29 (Q49XP0) RecName: Full=Conserved virulence factor C; &AP008934_... 39 0.29 CP000559_513(CP000559|pid:none) Methanocorpusculum labreanum Z, ... 39 0.29 BA000045_1255(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 39 0.29 CP001344_4536(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 39 0.38 CP001022_1990(CP001022|pid:none) Exiguobacterium sibiricum 255-1... 39 0.38 CP000521_1893(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 39 0.38 CP001124_3958(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 39 0.38 AM774415_778(AM774415|pid:none) Halobacterium salinarum complete... 39 0.38 CR380953_171(CR380953|pid:none) Candida glabrata strain CBS138 c... 38 0.50 CP001504_1817(CP001504|pid:none) Burkholderia glumae BGR1 chromo... 38 0.50 CP000240_1684(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-1... 38 0.50 AM746676_2663(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 38 0.50 (Q02178) RecName: Full=Bilin biosynthesis protein mpeV; &F45045... 38 0.65 CP001197_774(CP001197|pid:none) Desulfovibrio vulgaris str. 'Miy... 38 0.65 CP001390_3347(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 38 0.65 CP000477_733(CP000477|pid:none) Methanosaeta thermophila PT, com... 38 0.65 CP001037_1416(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 38 0.65 CP000099_2346(CP000099|pid:none) Methanosarcina barkeri str. Fus... 38 0.65 CP000473_7577(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 37 0.85 CP000393_1938(CP000393|pid:none) Trichodesmium erythraeum IMS101... 37 0.85 CR382139_130(CR382139|pid:none) Debaryomyces hansenii strain CBS... 37 1.1 CP000777_943(CP000777|pid:none) Leptospira biflexa serovar Patoc... 37 1.1 CP000027_513(CP000027|pid:none) Dehalococcoides ethenogenes 195,... 37 1.1 CP000380_612(CP000380|pid:none) Burkholderia cenocepacia AU 1054... 37 1.1 CP000142_829(CP000142|pid:none) Pelobacter carbinolicus DSM 2380... 37 1.1 CP000686_4488(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 37 1.4 (Q68F70) RecName: Full=Integrator complex subunit 4; Sh... 37 1.4 CP000852_272(CP000852|pid:none) Caldivirga maquilingensis IC-167... 37 1.4 CT971583_494(CT971583|pid:none) Synechococcus WH7803 complete ge... 37 1.4 CP001344_1822(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 36 1.9 AC011765_4(AC011765|pid:none) Arabidopsis thaliana chromosome 1 ... 36 1.9 CR522870_2889(CR522870|pid:none) Desulfotalea psychrophila LSv54... 36 1.9 CP000553_1872(CP000553|pid:none) Prochlorococcus marinus str. NA... 36 1.9 CP000113_5648(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 36 1.9 CP000812_220(CP000812|pid:none) Thermotoga lettingae TMO, comple... 35 3.2 AK129724_1(AK129724|pid:none) Homo sapiens cDNA FLJ26213 fis, cl... 35 3.2 AE004437_742(AE004437|pid:none) Halobacterium sp. NRC-1, complet... 35 3.2 CP001358_1360(CP001358|pid:none) Desulfovibrio desulfuricans sub... 35 3.2 CP000089_2315(CP000089|pid:none) Dechloromonas aromatica RCB, co... 35 3.2 CP000140_1121(CP000140|pid:none) Parabacteroides distasonis ATCC... 35 3.2 CP000909_3260(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 35 3.2 CP001037_859(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 35 3.2 CP001131_258(CP001131|pid:none) Anaeromyxobacter sp. K, complete... 35 3.2 AL672112_79(AL672112|pid:none) Mesorhizobium loti R7A symbiosis ... 35 4.2 AL844505_133(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 35 4.2 (O13828) RecName: Full=mRNA decapping complex subunit 2; ... 35 4.2 AE017126_1631(AE017126|pid:none) Prochlorococcus marinus subsp. ... 35 4.2 FM201303_1(FM201303|pid:none) Colletotrichum higginsianum kap1 g... 35 4.2 CP001037_3385(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 35 4.2 AC2179(AC2179) hypothetical protein alr2986 [imported] - Nostoc ... 35 4.2 BA000022_1800(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 35 5.5 M73548_2(M73548|pid:none) Human polyposis locus (DP2.5 gene) mRN... 35 5.5 CP001025_1868(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 35 5.5 AF349510_1(AF349510|pid:none) Aspergillus terreus general amidas... 35 5.5 AE017180_2204(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 35 5.5 AY552548_7(AY552548|pid:none) Fremyella diplosiphon TspO-like pr... 35 5.5 CP000505_1213(CP000505|pid:none) Thermofilum pendens Hrk 5, comp... 35 5.5 EF462416_1(EF462416|pid:none) Danio rerio clone 2775 myeloid/lym... 34 7.2 CP000271_2027(CP000271|pid:none) Burkholderia xenovorans LB400 c... 34 7.2 CP000686_3878(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 34 7.2 AY509253_25(AY509253|pid:none) Ostreid herpesvirus 1, complete g... 34 7.2 BC084088_1(BC084088|pid:none) Xenopus laevis hypothetical LOC495... 34 7.2 CP000240_918(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-13... 34 7.2 CP000859_1934(CP000859|pid:none) Desulfococcus oleovorans Hxd3, ... 34 9.4 AY197576_4(AY197576|pid:none) Myxococcus xanthus isolate 878-107... 34 9.4 CP000473_2582(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 34 9.4 CP000477_1149(CP000477|pid:none) Methanosaeta thermophila PT, co... 34 9.4 AK129201_1(AK129201|pid:none) Mus musculus mRNA for mKIAA0728 pr... 34 9.4 CP000850_3089(CP000850|pid:none) Salinispora arenicola CNS-205, ... 34 9.4 CP000473_1329(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 34 9.4
>(Q556G4) RecName: Full=Deoxyhypusine hydroxylase; EC=1.14.99.29; AltName: Full=Deoxyhypusine monooxygenase; AltName: Full=Deoxyhypusine dioxygenase; &AC116984_9(AC116984|pid:none) Length = 315
Score = 590 bits (1522), Expect = e-167 Identities = 301/301 (100%), Positives = 301/301 (100%) Frame = +1
Query: 73 NGLKETLTDVSQPIAKRFRSLFTLRNLNGPLCIDAMASALNDKSALLRHEIAYCLGQMED 252 NGLKETLTDVSQPIAKRFRSLFTLRNLNGPLCIDAMASALNDKSALLRHEIAYCLGQMED Sbjct: 10 NGLKETLTDVSQPIAKRFRSLFTLRNLNGPLCIDAMASALNDKSALLRHEIAYCLGQMED 69
Query: 253 EYALKVLIDLVKNSDEHPMVRHEAAEALGAIGSESAHKTLKEYSNDPVREVSETCQLALS 432 EYALKVLIDLVKNSDEHPMVRHEAAEALGAIGSESAHKTLKEYSNDPVREVSETCQLALS Sbjct: 70 EYALKVLIDLVKNSDEHPMVRHEAAEALGAIGSESAHKTLKEYSNDPVREVSETCQLALS 129
Query: 433 RVEWYEKNKPETEEDKMYMSVDPAPPLKKGSVSRDELRSKFLDSNLDIFNRYRALFSLRD 612 RVEWYEKNKPETEEDKMYMSVDPAPPLKKGSVSRDELRSKFLDSNLDIFNRYRALFSLRD Sbjct: 130 RVEWYEKNKPETEEDKMYMSVDPAPPLKKGSVSRDELRSKFLDSNLDIFNRYRALFSLRD 189
Query: 613 IGDEQSVLALCDGLKDQSSALLRHEVAFVLGQLQHRVAIDPLTTCVLDESENAMVRHEAA 792 IGDEQSVLALCDGLKDQSSALLRHEVAFVLGQLQHRVAIDPLTTCVLDESENAMVRHEAA Sbjct: 190 IGDEQSVLALCDGLKDQSSALLRHEVAFVLGQLQHRVAIDPLTTCVLDESENAMVRHEAA 249
Query: 793 EALGAIASTETIPLLEKLLQDKEPIVSESCAVALDVTEYFNNTESFQYADGIKILLEKNL 972 EALGAIASTETIPLLEKLLQDKEPIVSESCAVALDVTEYFNNTESFQYADGIKILLEKNL Sbjct: 250 EALGAIASTETIPLLEKLLQDKEPIVSESCAVALDVTEYFNNTESFQYADGIKILLEKNL 309
Query: 973 V 975 V Sbjct: 310 V 310
Lambda K H 0.317 0.132 0.372
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3204285 Number of Hits to DB: 1,342,790,268 Number of extensions: 23610394 Number of successful extensions: 70456 Number of sequences better than 10.0: 243 Number of HSP's gapped: 69807 Number of HSP's successfully gapped: 449 Length of query: 342 Length of database: 1,040,966,779 Length adjustment: 129 Effective length of query: 213 Effective length of database: 627,614,014 Effective search space: 133681784982 Effective search space used: 133681784982 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 32 (16.9 bits)
|
PSORT |
|
VS (DIR, S) |
0 |
VH (FL, L) |
0 |
VF (FL, S) |
2 |
AH (FL, L) |
0 |
AF (FL, S) |
0 |
SL (DIR, L) |
0 |
SS (DIR, S) |
0 |
SH (FL, L) |
0 |
SF (FL, S) |
0 |
CH (FL, L) |
0 |
CF (FL, S) |
0 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
0 |
FC-IC (SUB) |
0 |