Contig-U10384-1
Contig ID Contig-U10384-1
Contig update 2002. 9.13
Contig sequence
>Contig-U10384-1 (Contig-U10384-1Q) /CSM_Contig/Contig-U10384-1Q.Seq.d
ACTGTTGGCCTACTGGTAAAAATTTTAATTATAAATCTTAATAAATAATA
ATAATAATATATAATAAAGAATGGAAGATCCAAATGGTAATTTAGAAGAA
GATGCTGAATATTATGATCCAAATGATGAAGCAGGTGAATATGCAATTGA
AGGTGGTCAATTAGATCAAGATGATGAAATGATGGATGAACAAGATCATG
AAGAGCATGAAGACGAACCACAAGAAGAGGAAGAAGATTTAGTTGATGAA
TCAGTTCAAGGTTTCTTTGAACATACAGATTCAGTATATTGTGTTTCAAT
TAATAAAACTTTTCCAGATATTATTGCAACAGGTGGTGGTGATGATGTAG
CTTACCTTTGGGATTTAAATAGTGGTGAAAAAGTTCATCAACTTAAAGGT
CATTCAGATTCAATTAGTTCAATTGAATTCAATTATGATGGTAAATTAGT
TGCAACTGGTGGTATGGATGGTATTGTTAAAGTTTGGGATGTTCAAACTG
GTAATTTACTTATAAATTTAGAAGGTCCAACTGAATCAGTTGAGTGGATT
CAATGGCATTCAAAAGGTAATATTTTATTAGCAGGTTCATCAGATTGTTT
AGGATTTATGTGGTCAACATTAAAAGGTGATATTTTGGGTACATTTGCAG
GACATAGTGGTCCAGTTACATGTGGTATGTTTACACCAGATGGTAAGAAA
GTTATTACAGGTTCAGAAGATTGTTCAATTAAAGTTTGGAATCCAAAAGA
TTCTTCAAATATAATGTCATTTAGTGGTCATGGATTCCATGAAAAAATTA
TCACTTGTTTAGATATTAAAAATGATAATACATTAGTTTTATCTGGTGGT
GATGATCATTATGCTGTACTTTCAAATATAAATACTGGTAAAGTTATTGG
TAAACTTCATGGTCATACTGATTCAATCGTTGCTGTTTCAATGAGTAATC
ATAATCAAAGTTTTTGTCATACAGGTTCATTAGATGGTTCAATTAGAGTT
TGGGATATGAATACTTTACAACAAAGATCAACATTTAAACATAAATCATC
AATAACTAAATTAAAATCACATCCACATGAACCATTATTATTTAGTAGTA
GTGTTGATAAGAGTATTGGTGTTTGGGATGAAAGAAATGGTCAATTAATT
AAACAATTCACTGGTCATCAAGATGCTATTTTAGATTTTGATATCACTTT
AGATGGTAAAGTTGTAACTGCTTCTGATNATAAAGTTTCTTTAGTTTTCT
CTTTAAATCCTCCACAAAATTAAAAAAATATTAAAA

Gap no gap
Contig length 1286
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 2564824
End point 2563555
Strand (PLUS/MINUS) MINUS
Number of clones 2
Number of EST 3
Link to clone list U10384
List of clone(s)

est1=VFN450F,1,675
est2=VFD859F,27,566
est3=VFD859Z,586,1287
Translated Amino Acid sequence
llayw*kf*l*ilinnnnni**RMEDPNGNLEEDAEYYDPNDEAGEYAIEGGQLDQDDEM
MDEQDHEEHEDEPQEEEEDLVDESVQGFFEHTDSVYCVSINKTFPDIIATGGGDDVAYLW
DLNSGEKVHQLKGHSDSISSIEFNYDGKLVATGGMDGIVKVWDVQTGNLLINLEGPTESV
EWIQWHSKGNILLAGSSDCLGFMWSTLKGDILGTFAGHSGPVTCGMFTPDGKKVITGSED
CSIKVWNPKDSSNIMSFSGHGFHEKIITCLDIKNDNTLVLSGGDDHYAVLSNINTGKVIG
KLHGHTDSIVAVSMSNHNQSFCHTGSLDGSIRVWDMNTLQQRSTFKHKSSITKLKSHPHE
PLLFSSSVDKSIGVWDERNGQLIKQFTGHQDAILDFDITLDGKVVTASDXKVSLVFSLNP
PQN*knik


Translated Amino Acid sequence (All Frames)
Frame A:
tvgllvkiliinlnk****yiikngrskw*frrrc*il*sk**sr*icn*rwsirsr**n
dg*trs*ra*rrttrrgrrfs**issrfl*tyrfsilcfn**nfsryycnrww**cslpl
gfk*w*kssst*rsfrfn*fn*iql*w*iscnwwygwyc*slgcsnw*ftykfrrsn*is
*vdsmafkr*yfisrfirlfriyvvnikr*yfgyicrt*wssymwyvytrw*esyyrfrr
lfn*sleskrffkynvi*wswip*knyhlfry*k**yisfiww**slcctfkykyw*syw
*tswsy*fnrccfne*s*skflsyrfirwfn*slgyeyfttkini*t*iinn*ikitst*
tiii***c**eywclg*kkwsin*tihwssrcyfrf*yhfrw*scncf*x*sffsflfks
stklkky*


Frame B:
llayw*kf*l*ilinnnnni**RMEDPNGNLEEDAEYYDPNDEAGEYAIEGGQLDQDDEM
MDEQDHEEHEDEPQEEEEDLVDESVQGFFEHTDSVYCVSINKTFPDIIATGGGDDVAYLW
DLNSGEKVHQLKGHSDSISSIEFNYDGKLVATGGMDGIVKVWDVQTGNLLINLEGPTESV
EWIQWHSKGNILLAGSSDCLGFMWSTLKGDILGTFAGHSGPVTCGMFTPDGKKVITGSED
CSIKVWNPKDSSNIMSFSGHGFHEKIITCLDIKNDNTLVLSGGDDHYAVLSNINTGKVIG
KLHGHTDSIVAVSMSNHNQSFCHTGSLDGSIRVWDMNTLQQRSTFKHKSSITKLKSHPHE
PLLFSSSVDKSIGVWDERNGQLIKQFTGHQDAILDFDITLDGKVVTASDXKVSLVFSLNP
PQN*knik


Frame C:
cwptgknfnyks**iiiiiynkewkiqmvi*kkmlnimiqmmkqvnmqlkvvn*ikmmk*
wmnkimksmktnhkkrkki*lmnqfkvslniqiqyivfqliklfqillqqvvvmm*ltfg
i*ivvkkfinlkviqiqlvqlnsimmvn*lqlvvwmvllkfgmfklviyl*i*kvqlnql
sgfngiqkvify*qvhqiv*dlcgqh*kvifwvhlqdivvqlhvvclhqmvrkllqvqki
vqlkfgiqkilqi*chlvvmdsmkklslv*ilkmiih*fylvvmiimlyfqi*ilvkllv
nfmviliqsllfq*viiikvfviqvh*mvqlefgi*ilynkdqhlninhq*ln*nhihmn
hyylvvvlirvlvfgmkemvn*lnnslvikmlf*ilisl*mvkl*lllxikfl*fsl*il
hkikkilk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U10384-1 (Contig-U10384-1Q)
/CSM_Contig/Contig-U10384-1Q.Seq.d
(1286 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U10384-1 (Contig-U10384-1Q) /CSM_Contig/Conti... 2381 0.0
Contig-U11582-1 (Contig-U11582-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U10858-1 (Contig-U10858-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U08848-1 (Contig-U08848-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U13533-1 (Contig-U13533-1Q) /CSM_Contig/Conti... 38 0.023
Contig-U07886-1 (Contig-U07886-1Q) /CSM_Contig/Conti... 38 0.023
Contig-U03733-1 (Contig-U03733-1Q) /CSM_Contig/Conti... 38 0.023
Contig-U13964-1 (Contig-U13964-1Q) /CSM_Contig/Conti... 36 0.091
Contig-U12401-1 (Contig-U12401-1Q) /CSM_Contig/Conti... 36 0.091
Contig-U12146-1 (Contig-U12146-1Q) /CSM_Contig/Conti... 36 0.091

>Contig-U10384-1 (Contig-U10384-1Q) /CSM_Contig/Contig-U10384-1Q.Seq.d
Length = 1286

Score = 2381 bits (1201), Expect = 0.0
Identities = 1204/1204 (100%)
Strand = Plus / Plus


Query: 68 agaatggaagatccaaatggtaatttagaagaagatgctgaatattatgatccaaatgat 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 agaatggaagatccaaatggtaatttagaagaagatgctgaatattatgatccaaatgat 127


Query: 128 gaagcaggtgaatatgcaattgaaggtggtcaattagatcaagatgatgaaatgatggat 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 gaagcaggtgaatatgcaattgaaggtggtcaattagatcaagatgatgaaatgatggat 187


Query: 188 gaacaagatcatgaagagcatgaagacgaaccacaagaagaggaagaagatttagttgat 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 gaacaagatcatgaagagcatgaagacgaaccacaagaagaggaagaagatttagttgat 247


Query: 248 gaatcagttcaaggtttctttgaacatacagattcagtatattgtgtttcaattaataaa 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gaatcagttcaaggtttctttgaacatacagattcagtatattgtgtttcaattaataaa 307


Query: 308 acttttccagatattattgcaacaggtggtggtgatgatgtagcttacctttgggattta 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 acttttccagatattattgcaacaggtggtggtgatgatgtagcttacctttgggattta 367


Query: 368 aatagtggtgaaaaagttcatcaacttaaaggtcattcagattcaattagttcaattgaa 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aatagtggtgaaaaagttcatcaacttaaaggtcattcagattcaattagttcaattgaa 427


Query: 428 ttcaattatgatggtaaattagttgcaactggtggtatggatggtattgttaaagtttgg 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ttcaattatgatggtaaattagttgcaactggtggtatggatggtattgttaaagtttgg 487


Query: 488 gatgttcaaactggtaatttacttataaatttagaaggtccaactgaatcagttgagtgg 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gatgttcaaactggtaatttacttataaatttagaaggtccaactgaatcagttgagtgg 547


Query: 548 attcaatggcattcaaaaggtaatattttattagcaggttcatcagattgtttaggattt 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 attcaatggcattcaaaaggtaatattttattagcaggttcatcagattgtttaggattt 607


Query: 608 atgtggtcaacattaaaaggtgatattttgggtacatttgcaggacatagtggtccagtt 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 atgtggtcaacattaaaaggtgatattttgggtacatttgcaggacatagtggtccagtt 667


Query: 668 acatgtggtatgtttacaccagatggtaagaaagttattacaggttcagaagattgttca 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 acatgtggtatgtttacaccagatggtaagaaagttattacaggttcagaagattgttca 727


Query: 728 attaaagtttggaatccaaaagattcttcaaatataatgtcatttagtggtcatggattc 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 attaaagtttggaatccaaaagattcttcaaatataatgtcatttagtggtcatggattc 787


Query: 788 catgaaaaaattatcacttgtttagatattaaaaatgataatacattagttttatctggt 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 catgaaaaaattatcacttgtttagatattaaaaatgataatacattagttttatctggt 847


Query: 848 ggtgatgatcattatgctgtactttcaaatataaatactggtaaagttattggtaaactt 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 ggtgatgatcattatgctgtactttcaaatataaatactggtaaagttattggtaaactt 907


Query: 908 catggtcatactgattcaatcgttgctgtttcaatgagtaatcataatcaaagtttttgt 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 catggtcatactgattcaatcgttgctgtttcaatgagtaatcataatcaaagtttttgt 967


Query: 968 catacaggttcattagatggttcaattagagtttgggatatgaatactttacaacaaaga 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 catacaggttcattagatggttcaattagagtttgggatatgaatactttacaacaaaga 1027


Query: 1028 tcaacatttaaacataaatcatcaataactaaattaaaatcacatccacatgaaccatta 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 tcaacatttaaacataaatcatcaataactaaattaaaatcacatccacatgaaccatta 1087


Query: 1088 ttatttagtagtagtgttgataagagtattggtgtttgggatgaaagaaatggtcaatta 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 ttatttagtagtagtgttgataagagtattggtgtttgggatgaaagaaatggtcaatta 1147


Query: 1148 attaaacaattcactggtcatcaagatgctattttagattttgatatcactttagatggt 1207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1148 attaaacaattcactggtcatcaagatgctattttagattttgatatcactttagatggt 1207


Query: 1208 aaagttgtaactgcttctgatnataaagtttctttagttttctctttaaatcctccacaa 1267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1208 aaagttgtaactgcttctgatnataaagtttctttagttttctctttaaatcctccacaa 1267


Query: 1268 aatt 1271
||||
Sbjct: 1268 aatt 1271


Score = 32.2 bits (16), Expect = 1.4
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 1 actgttggcctactgg 16
||||||||||||||||
Sbjct: 1 actgttggcctactgg 16


>Contig-U11582-1 (Contig-U11582-1Q) /CSM_Contig/Contig-U11582-1Q.Seq.d
Length = 2674

Score = 40.1 bits (20), Expect = 0.006
Identities = 23/24 (95%)
Strand = Plus / Plus


Query: 815 attaaaaatgataatacattagtt 838
||||||||| ||||||||||||||
Sbjct: 371 attaaaaataataatacattagtt 394


>Contig-U10858-1 (Contig-U10858-1Q) /CSM_Contig/Contig-U10858-1Q.Seq.d
Length = 2169

Score = 40.1 bits (20), Expect = 0.006
Identities = 29/32 (90%)
Strand = Plus / Plus


Query: 981 tagatggttcaattagagtttgggatatgaat 1012
|||||||| | ||||||||||||||| |||||
Sbjct: 1191 tagatggtactattagagtttgggatgtgaat 1222


Score = 32.2 bits (16), Expect = 1.4
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 1 actgttggcctactgg 16
||||||||||||||||
Sbjct: 1 actgttggcctactgg 16


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 20,316
Number of Sequences: 6905
Number of extensions: 20316
Number of successful extensions: 2857
Number of sequences better than 10.0: 690
length of query: 1286
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1270
effective length of database: 5,564,391
effective search space: 7066776570
effective search space used: 7066776570
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.19
Homology vs DNA
Query= Contig-U10384-1 (Contig-U10384-1Q) /CSM_Contig/Contig-U10384-1Q.Seq.d
(1286 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ430745) Dictyostelium discoideum cDNA clone:ddv8f16, 3' e... 1354 0.0 1
(BJ416849) Dictyostelium discoideum cDNA clone:ddv27d14, 5' ... 860 0.0 2
(BJ412460) Dictyostelium discoideum cDNA clone:ddv8f16, 5' e... 987 0.0 1
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 34 0.008 13
(CP000939) Clostridium botulinum B1 str. Okra, complete genome. 38 0.012 22
(ER302033) 1092343710413 Global-Ocean-Sampling_GS-34-01-01-1... 42 0.062 2
(BJ363336) Dictyostelium discoideum cDNA clone:ddc26k01, 5' ... 34 0.077 3
(CP000726) Clostridium botulinum A str. ATCC 19397, complete... 38 0.14 22
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 38 0.21 10
(BD100749) Novel genes cloned in humanneuroblastoma and frag... 42 0.22 2
(BD020811) Novel gene and novel gene fragment cloned in huma... 42 0.22 2
(BJ416412) Dictyostelium discoideum cDNA clone:ddv26i10, 5' ... 36 0.40 3
(AC116985) Dictyostelium discoideum chromosome 2 map 6135249... 32 0.64 5
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 36 0.64 25
(AC127693) Mus musculus BAC clone RP23-135G19 from 17, compl... 48 0.83 1
(AC122487) Mus musculus BAC clone RP24-381E21 from chromosom... 48 0.83 1
(AC155073) Mus musculus chromosome 8 clone RP24-271B15 map 8... 48 0.83 1
(AZ322265) 1M0043K02F Mouse 10kb plasmid UUGC1M library Mus ... 48 0.83 1
(EK399098) 1095469533501 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.83 1
(DB768429) Apis mellifera head cDNA, RIKEN full-length enric... 48 0.83 1
(CU928096) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 1.3 8
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 38 1.4 8
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 32 1.7 12
(Z81131) Caenorhabditis elegans Cosmid T24D1. 36 1.9 2
(AM542437) Paracentrotus lividus EST, clone MPMGp1171J24108Q... 34 1.9 3
(AR546122) Sequence 1253 from patent US 6747137. 32 2.2 4
(CV124549) OSTF30030H04 pDONR201 Entry vector Caenorhabditis... 36 2.2 2
(CJ989280) Bursaphelenchus xylophilus cDNA clone: Bx_KDi_13A... 36 2.4 2
(G73929) STS1-182 Small Insert Genomic DNA Library Caenorhab... 36 2.4 2
(CP000728) Clostridium botulinum F str. Langeland, complete ... 38 2.7 20
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet... 38 3.0 22
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 40 3.0 11
(AC094004) Rattus norvegicus clone CH230-147H19, WORKING DRA... 46 3.3 1
(AC181024) Strongylocentrotus purpuratus clone R3-3028F22, W... 46 3.3 1
(AC179783) Strongylocentrotus purpuratus clone R3-1015G17, W... 46 3.3 1
(AC179170) Strongylocentrotus purpuratus clone R3-4016G24, W... 46 3.3 1
(ER349370) 1092345448862 Global-Ocean-Sampling_GS-34-01-01-1... 46 3.3 1
(ER333635) 1092344285066 Global-Ocean-Sampling_GS-34-01-01-1... 46 3.3 1
(EJ631353) 1092963533067 Global-Ocean-Sampling_GS-29-01-01-1... 46 3.3 1
(EJ372627) 1092963729414 Global-Ocean-Sampling_GS-28-01-01-1... 46 3.3 1
(ED692678) GM_WBb0030K01.f GM_WBb Glycine max genomic clone ... 46 3.3 1
(CZ530178) SRAA-aac65e04.g1 Strongyloides ratti whole genome... 46 3.3 1
(DY769355) 72H_new20_G14 Bicyclus anynana wings - 72H pupae ... 46 3.3 1
(CV755832) sjl5-008_F05_sjl5-008F05-T3_045.ab1 SJL Schistoso... 46 3.3 1
(CV751063) SJL4-004_G05_SJL4-004G05-T3_037.ab1 SJL Schistoso... 46 3.3 1
(FC563279) CAWF4891.fwd CAWF Lottia gigantea from mantle (H)... 46 3.3 1
(FC551444) AIAI-aae00d02.g1 Anclostoma_caninum_EST_L3_Activa... 46 3.3 1
(FC546593) AIAI-aad42f04.b1 Anclostoma_caninum_EST_L3_Activa... 46 3.3 1
(EX563617) AIAE-aaa87a07.g1 Ancylostoma_caninum_EST_Female_p... 46 3.3 1
(EX559592) AIAE-aaa76c04.b1 Ancylostoma_caninum_EST_Female_p... 46 3.3 1
(EX554840) AIAE-aaa76c04.g1 Ancylostoma_caninum_EST_Female_p... 46 3.3 1
(EX546350) AIAC-aaa66e12.g1 Ancylostoma_caninum_EST_Male_pSM... 46 3.3 1
(AP004525) Lotus japonicus genomic DNA, chromosome 5, clone:... 34 3.6 5
(EJ959969) 1093018997314 Global-Ocean-Sampling_GS-30-02-01-1... 42 3.8 2
(AR549224) Sequence 4355 from patent US 6747137. 36 3.8 2
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 34 3.8 22
(EK348397) 1095467605777 Global-Ocean-Sampling_GS-31-01-01-1... 42 4.3 2
(BJ411762) Dictyostelium discoideum cDNA clone:ddv5p15, 5' e... 36 4.9 2
(AC194393) Zea mays chromosome 3 clone CH201-190P23; ZMMBBc0... 32 6.1 2
(AL627168) Zebrafish DNA sequence from clone RP71-1M12 in li... 32 6.1 2
(CR853292) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 32 6.1 2
(AC194042) Zea mays chromosome 9 clone CH201-478P17; ZMMBBc0... 32 6.1 2
(CU928007) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 32 6.7 2
(AC067830) Homo sapiens chromosome 2 clone RP11-159C9 map 2,... 38 7.0 3
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 34 7.9 12
(EJ620645) 1092963058254 Global-Ocean-Sampling_GS-29-01-01-1... 34 8.1 3
(BZ650290) OGCCX87TM ZM_0.7_1.5_KB Zea mays genomic clone ZM... 32 8.2 2
(CC624914) OGWBU22TV ZM_0.7_1.5_KB Zea mays genomic clone ZM... 32 8.2 2
(BZ650283) OGCCX87TC ZM_0.7_1.5_KB Zea mays genomic clone ZM... 32 8.3 2
(BZ967124) PUDGT83TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 32 8.3 2
(BI273034) NF043C06FL1F1049 Developing flower Medicago trunc... 42 8.6 2
(BJ413734) Dictyostelium discoideum cDNA clone:ddv16e19, 5' ... 32 9.8 3

>(BJ430745) Dictyostelium discoideum cDNA clone:ddv8f16, 3' end,
single read.
Length = 702

Score = 1354 bits (683), Expect = 0.0
Identities = 686/686 (100%)
Strand = Plus / Minus


Query: 586 ttcatcagattgtttaggatttatgtggtcaacattaaaaggtgatattttgggtacatt 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 ttcatcagattgtttaggatttatgtggtcaacattaaaaggtgatattttgggtacatt 643


Query: 646 tgcaggacatagtggtccagttacatgtggtatgtttacaccagatggtaagaaagttat 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tgcaggacatagtggtccagttacatgtggtatgtttacaccagatggtaagaaagttat 583


Query: 706 tacaggttcagaagattgttcaattaaagtttggaatccaaaagattcttcaaatataat 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tacaggttcagaagattgttcaattaaagtttggaatccaaaagattcttcaaatataat 523


Query: 766 gtcatttagtggtcatggattccatgaaaaaattatcacttgtttagatattaaaaatga 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gtcatttagtggtcatggattccatgaaaaaattatcacttgtttagatattaaaaatga 463


Query: 826 taatacattagttttatctggtggtgatgatcattatgctgtactttcaaatataaatac 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 taatacattagttttatctggtggtgatgatcattatgctgtactttcaaatataaatac 403


Query: 886 tggtaaagttattggtaaacttcatggtcatactgattcaatcgttgctgtttcaatgag 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tggtaaagttattggtaaacttcatggtcatactgattcaatcgttgctgtttcaatgag 343


Query: 946 taatcataatcaaagtttttgtcatacaggttcattagatggttcaattagagtttggga 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 taatcataatcaaagtttttgtcatacaggttcattagatggttcaattagagtttggga 283


Query: 1006 tatgaatactttacaacaaagatcaacatttaaacataaatcatcaataactaaattaaa 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tatgaatactttacaacaaagatcaacatttaaacataaatcatcaataactaaattaaa 223


Query: 1066 atcacatccacatgaaccattattatttagtagtagtgttgataagagtattggtgtttg 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 atcacatccacatgaaccattattatttagtagtagtgttgataagagtattggtgtttg 163


Query: 1126 ggatgaaagaaatggtcaattaattaaacaattcactggtcatcaagatgctattttaga 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 ggatgaaagaaatggtcaattaattaaacaattcactggtcatcaagatgctattttaga 103


Query: 1186 ttttgatatcactttagatggtaaagttgtaactgcttctgatnataaagtttctttagt 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 ttttgatatcactttagatggtaaagttgtaactgcttctgatnataaagtttctttagt 43


Query: 1246 tttctctttaaatcctccacaaaatt 1271
||||||||||||||||||||||||||
Sbjct: 42 tttctctttaaatcctccacaaaatt 17

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,520,715,749
Number of extensions: 91631194
Number of successful extensions: 7785072
Number of sequences better than 10.0: 72
Length of query: 1286
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1262
Effective length of database: 97,308,875,965
Effective search space: 122803801467830
Effective search space used: 122803801467830
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.27
Homology vs Protein
Query= Contig-U10384-1 (Contig-U10384-1Q) /CSM_Contig/Contig-U10384-1Q.Seq.d
(1286 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

EF677877_1(EF677877|pid:none) Picea sitchensis clone WS0277_A02 ... 278 2e-73
AM441735_1(AM441735|pid:none) Vitis vinifera contig VV78X156877.... 271 5e-71
AK111863_1(AK111863|pid:none) Oryza sativa Japonica Group cDNA c... 268 2e-70
AY080732_1(AY080732|pid:none) Arabidopsis thaliana unknown prote... 267 7e-70
CP001332_341(CP001332|pid:none) Micromonas sp. RCC299 chromosome... 264 6e-69
BT088239_1(BT088239|pid:none) Zea mays full-length cDNA clone ZM... 263 1e-68
BT039976_1(BT039976|pid:none) Zea mays full-length cDNA clone ZM... 262 2e-68
AC087851_1(AC087851|pid:none) Oryza sativa chromosome 3 BAC OSJN... 262 2e-68
EF661023_4(EF661023|pid:none) Carica papaya clone BAC PH61H02, c... 247 7e-64
CP000583_436(CP000583|pid:none) Ostreococcus lucimarinus CCE9901... 244 5e-63
(O13982) RecName: Full=Uncharacterized WD repeat-containing prot... 236 1e-60
BC135552_1(BC135552|pid:none) Xenopus tropicalis hypothetical pr... 231 6e-59
BC077271_1(BC077271|pid:none) Xenopus laevis MGC80037 protein, m... 230 9e-59
CR954203_431(CR954203|pid:none) Ostreococcus tauri strain OTTH05... 228 3e-58
A96741(A96741) hypothetical protein F14O23.22 [imported] - Arabi... 226 2e-57
(Q7YR70) RecName: Full=Angio-associated migratory cell protein; ... 216 2e-54
(Q3SZK1) RecName: Full=Angio-associated migratory cell protein; ... 215 2e-54
BC159424_1(BC159424|pid:none) Rattus norvegicus angio-associated... 215 2e-54
AK151820_1(AK151820|pid:none) Mus musculus bone marrow macrophag... 215 3e-54
BC014122_1(BC014122|pid:none) Homo sapiens cDNA clone MGC:20699 ... 214 4e-54
(Q5RCG7) RecName: Full=Angio-associated migratory cell protein; 214 4e-54
(Q13685) RecName: Full=Angio-associated migratory cell protein; ... 214 4e-54
CR456755_1(CR456755|pid:none) Homo sapiens full open reading fra... 214 4e-54
BT059785_1(BT059785|pid:none) Salmo salar clone ssal-rgf-521-159... 210 8e-53
CR858303_1(CR858303|pid:none) Pongo abelii mRNA; cDNA DKFZp469M0... 206 1e-51
BC067708_1(BC067708|pid:none) Danio rerio zgc:85939, mRNA (cDNA ... 188 3e-46
CP001291_1144(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 182 3e-44
CP001037_1914(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 174 8e-42
CP001037_1143(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 171 4e-41
CP000686_859(CP000686|pid:none) Roseiflexus sp. RS-1, complete g... 168 4e-40
CP000117_1553(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 164 5e-39
AP007163_34(AP007163|pid:none) Aspergillus oryzae RIB40 genomic ... 161 5e-38
CP000492_814(CP000492|pid:none) Chlorobium phaeobacteroides DSM ... 160 7e-38
AP009552_3821(AP009552|pid:none) Microcystis aeruginosa NIES-843... 160 9e-38
CP000828_167(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 160 1e-37
AF323583_1(AF323583|pid:none) Podospora anserina beta transducin... 159 2e-37
CU074270_1(CU074270|pid:none) Podospora anserina genomic DNA, NW... 158 3e-37
BX538352_44(BX538352|pid:none) Cryptosporidium parvum chromosome... 158 5e-37
AF323582_1(AF323582|pid:none) Podospora anserina beta transducin... 157 6e-37
AF323584_1(AF323584|pid:none) Podospora anserina beta transducin... 157 6e-37
(Q00808) RecName: Full=Vegetative incompatibility protein HET-E-... 157 8e-37
CU074274_1(CU074274|pid:none) Podospora anserina genomic DNA, NW... 154 5e-36
AM746676_3634(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 154 9e-36
BA000045_4356(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 153 1e-35
BA000045_4351(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 152 2e-35
AE017341_790(AE017341|pid:none) Cryptococcus neoformans var. neo... 152 3e-35
BA000045_1965(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 151 6e-35
AP007175_262(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 150 7e-35
CP000117_2804(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 150 9e-35
(Q8YTC2) RecName: Full=Uncharacterized WD repeat-containing prot... 150 1e-34
CP001037_1323(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 150 1e-34
AI2493(AI2493) WD-repeat protein [imported] - Nostoc sp. (strain... 149 2e-34
(Q0P593) RecName: Full=WD repeat-containing protein 69; &BC1203... 148 4e-34
CP000393_2151(CP000393|pid:none) Trichodesmium erythraeum IMS101... 147 6e-34
(Q5BK30) RecName: Full=WD repeat-containing protein 69; &BC0912... 147 8e-34
CP000807_36(CP000807|pid:none) Cyanothece sp. ATCC 51142 linear ... 147 8e-34
CP000842_108(CP000842|pid:none) Acaryochloris marina MBIC11017 p... 146 2e-33
CP001037_6067(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 145 2e-33
CP001037_4818(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 145 3e-33
CP000117_2100(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 145 4e-33
CP001037_247(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 145 4e-33
(Q8N136) RecName: Full=WD repeat-containing protein 69; &AC0730... 144 5e-33
AK098821_1(AK098821|pid:none) Homo sapiens cDNA FLJ25955 fis, cl... 144 7e-33
AK301861_1(AK301861|pid:none) Homo sapiens cDNA FLJ54195 complet... 144 7e-33
CP000828_5861(CP000828|pid:none) Acaryochloris marina MBIC11017,... 144 9e-33
CP000117_2617(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 144 9e-33
CP000117_4653(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 143 1e-32
AM746676_8405(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 143 1e-32
AF323585_1(AF323585|pid:none) Podospora anserina beta transducin... 143 1e-32
AK016201_1(AK016201|pid:none) Mus musculus adult male testis cDN... 142 3e-32
AE1810(AE1810) WD-40 repeat protein [imported] - Nostoc sp. (str... 142 3e-32
AM746676_2689(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 142 3e-32
AH2195(AH2195) hypothetical protein alr3119 [imported] - Nostoc ... 142 3e-32
CP000806_2172(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 140 8e-32
CP001037_139(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 140 8e-32
CP000393_4067(CP000393|pid:none) Trichodesmium erythraeum IMS101... 140 1e-31
AC159435_6(AC159435|pid:none) Trypanosoma brucei chromosome 8 cl... 140 1e-31
CP001291_1208(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 139 2e-31
CP001344_1900(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 139 2e-31
CP000117_2488(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 139 2e-31
AG1889(AG1889) WD-40 repeat protein [imported] - Nostoc sp. (str... 139 3e-31
BC124403_1(BC124403|pid:none) Danio rerio WD repeat domain 69, m... 139 3e-31
(Q1LV15) RecName: Full=WD repeat-containing protein 69; &BC1244... 138 4e-31
CU633453_76(CU633453|pid:none) Podospora anserina genomic DNA ch... 138 4e-31
AP009552_6258(AP009552|pid:none) Microcystis aeruginosa NIES-843... 138 5e-31
BA000045_2888(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 138 5e-31
CP001037_5630(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 137 6e-31
CP000148_1200(CP000148|pid:none) Geobacter metallireducens GS-15... 136 1e-30
CP000117_3846(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 136 1e-30
AM502251_6(AM502251|pid:none) Leishmania infantum chromosome 33. 136 2e-30
CP001038_141(CP001038|pid:none) Nostoc punctiforme PCC 73102 pla... 135 2e-30
AC1842(AC1842) WD-40 repeat protein [imported] - Nostoc sp. (str... 135 3e-30
CP001037_1497(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 135 4e-30
CP000108_212(CP000108|pid:none) Chlorobium chlorochromatii CaD3,... 134 5e-30
(P49695) RecName: Full=Probable serine/threonine-protein kinase ... 134 7e-30
CP000117_2838(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 134 7e-30
(Q5FWQ6) RecName: Full=WD repeat-containing protein 69; &BC0892... 134 7e-30
CP000839_340(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 134 7e-30
AD1842(AD1842) WD-40 repeat protein [imported] - Nostoc sp. (str... 134 9e-30
CP000117_4826(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 134 9e-30
CP000119_130(CP000119|pid:none) Anabaena variabilis ATCC 29413 p... 134 9e-30
CP001037_1432(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 134 9e-30
DQ151642_1(DQ151642|pid:none) Chlamydomonas reinhardtii WD repea... 133 1e-29
BA000045_1630(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 133 1e-29
FN392322_76(FN392322|pid:none) Pichia pastoris GS115 chromosome ... 133 1e-29
T22703(T22703)hypothetical protein F55B12.3 - Caenorhabditis ele... 133 2e-29
(Q93794) RecName: Full=F-box/WD repeat-containing protein sel-10... 133 2e-29
CP000393_3425(CP000393|pid:none) Trichodesmium erythraeum IMS101... 133 2e-29
(Q6P2Y2) RecName: Full=WD repeat-containing protein 69; &BC0642... 133 2e-29
CP000828_3726(CP000828|pid:none) Acaryochloris marina MBIC11017,... 132 2e-29
CP000117_1538(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 130 8e-29
CP000839_184(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 130 8e-29
CP001099_247(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ... 130 1e-28
AH2154(AH2154) WD-repeat protein [imported] - Nostoc sp. (strain... 130 1e-28
AG2400(AG2400) WD-repeat protein [imported] - Nostoc sp. (strain... 129 2e-28
CP001037_4354(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 129 2e-28
CP000393_1374(CP000393|pid:none) Trichodesmium erythraeum IMS101... 129 2e-28
AM778957_201(AM778957|pid:none) Microcystis aeruginosa PCC 7806 ... 129 2e-28
CP000828_20(CP000828|pid:none) Acaryochloris marina MBIC11017, c... 129 2e-28
CP001101_2134(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 129 3e-28
CP000806_3920(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 128 5e-28
CP000117_5003(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 127 7e-28
CT005270_6(CT005270|pid:none) Leishmania major strain Friedlin, ... 127 7e-28
CP000117_2956(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 127 9e-28
CP000828_5338(CP000828|pid:none) Acaryochloris marina MBIC11017,... 127 1e-27
CP001291_2528(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 126 1e-27
BT075698_1(BT075698|pid:none) Osmerus mordax clone omor-rgc-001-... 126 2e-27
CP001097_2083(CP001097|pid:none) Chlorobium limicola DSM 245, co... 125 3e-27
AP009552_5466(AP009552|pid:none) Microcystis aeruginosa NIES-843... 125 4e-27
DQ647383_1(DQ647383|pid:none) Chlamydomonas reinhardtii lissence... 124 6e-27
CP001037_148(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 124 1e-26
CR382129_66(CR382129|pid:none) Yarrowia lipolytica strain CLIB12... 123 1e-26
CP001328_404(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 123 1e-26
AM778958_177(AM778958|pid:none) Microcystis aeruginosa PCC 7806 ... 123 2e-26
CP000393_3289(CP000393|pid:none) Trichodesmium erythraeum IMS101... 123 2e-26
AM502224_3(AM502224|pid:none) Leishmania infantum chromosome 6. 123 2e-26
CP000117_2178(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 122 4e-26
AM269969_6(AM269969|pid:none) Aspergillus niger contig An01c0220... 122 4e-26
FN314118_1(FN314118|pid:none) Schistosoma japonicum isolate Anhu... 121 5e-26
CP001037_5275(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 121 5e-26
CP001099_1375(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 121 5e-26
CP000393_1925(CP000393|pid:none) Trichodesmium erythraeum IMS101... 121 5e-26
AM920437_2228(AM920437|pid:none) Penicillium chrysogenum Wiscons... 121 6e-26
AP007151_775(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 121 6e-26
AY457171_1(AY457171|pid:none) Leishmania amazonensis antigenic W... 121 6e-26
(Q9D7H2) RecName: Full=WD repeat-containing protein 5B; &AK0092... 121 6e-26
AB209790_1(AB209790|pid:none) Homo sapiens mRNA for angio-associ... 120 8e-26
(Q61FW2) RecName: Full=F-box/WD repeat-containing protein sel-10... 120 8e-26
AM778950_12(AM778950|pid:none) Microcystis aeruginosa PCC 7806 g... 120 8e-26
CT005245_3(CT005245|pid:none) Leishmania major strain Friedlin, ... 120 8e-26
CP000828_160(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 120 1e-25
AX023751_1(AX023751|pid:none) Sequence 8 from Patent EP0999284. 120 1e-25
AL078635_13(AL078635|pid:none) Amycolatopsis orientalis cosmid p... 120 1e-25
AP003224_20(AP003224|pid:none) Oryza sativa Japonica Group genom... 119 2e-25
AP009552_1527(AP009552|pid:none) Microcystis aeruginosa NIES-843... 119 2e-25
AJ243006_1(AJ243006|pid:none) Homo sapiens mRNA for apoptotic pr... 119 2e-25
EF560718_1(EF560718|pid:none) Homo sapiens clone DKFZp781B1145 A... 119 2e-25
AJ243007_1(AJ243007|pid:none) Homo sapiens mRNA for apoptotic pr... 119 2e-25
AC116668_12(AC116668|pid:none) Trypanosoma brucei chromosome 5 c... 119 2e-25
CP000686_3296(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 119 2e-25
CP000806_1073(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 119 3e-25
AY316746_172(AY316746|pid:none) Rhizobium sp. NGR234 megaplasmid... 119 3e-25
CU074316_1(CU074316|pid:none) Podospora anserina genomic DNA, NW... 118 4e-25
CP000393_2802(CP000393|pid:none) Trichodesmium erythraeum IMS101... 118 4e-25
CU640366_848(CU640366|pid:none) Podospora anserina genomic DNA c... 118 4e-25
FM992692_491(FM992692|pid:none) Candida dubliniensis CD36 chromo... 118 5e-25
AL606668_18(AL606668|pid:none) Oryza sativa genomic DNA, chromos... 118 5e-25
CP000828_5917(CP000828|pid:none) Acaryochloris marina MBIC11017,... 118 5e-25
BC095217_1(BC095217|pid:none) Danio rerio zgc:110281, mRNA (cDNA... 118 5e-25
AP009552_5491(AP009552|pid:none) Microcystis aeruginosa NIES-843... 117 7e-25
CP000117_173(CP000117|pid:none) Anabaena variabilis ATCC 29413, ... 117 7e-25
CP001110_343(CP001110|pid:none) Pelodictyon phaeoclathratiforme ... 117 9e-25
AC007259_17(AC007259|pid:none) Arabidopsis thaliana chromosome I... 117 9e-25
CP000393_3212(CP000393|pid:none) Trichodesmium erythraeum IMS101... 117 9e-25
(Q8I0F4) RecName: Full=Lissencephaly-1 homolog; AltName: Full=Dd... 117 9e-25
(P25382) RecName: Full=WD repeat-containing protein YCR072C; &A... 117 9e-25
CP000845_57(CP000845|pid:none) Acaryochloris marina MBIC11017 pl... 117 9e-25
S19487(S19487;S26657)hypothetical protein YCR072c - yeast (Sacch... 117 1e-24
CP000806_3916(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 117 1e-24
CP000828_5196(CP000828|pid:none) Acaryochloris marina MBIC11017,... 117 1e-24
AP009493_3398(AP009493|pid:none) Streptomyces griseus subsp. gri... 117 1e-24
AL732349_11(AL732349|pid:none) Oryza sativa genomic DNA, chromos... 116 2e-24
AJ243107_1(AJ243107|pid:none) Homo sapiens mRNA for apoptotic pr... 116 2e-24
AL953881_1(AL953881|pid:none) Zebrafish DNA sequence from clone ... 116 2e-24
CP000117_2141(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 116 2e-24
CP000839_311(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 116 2e-24
AJ243008_1(AJ243008|pid:none) Homo sapiens mRNA for apoptotic pr... 116 2e-24
CP000393_145(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 116 2e-24
EF083131_1(EF083131|pid:none) Picea sitchensis clone WS02722_J02... 115 3e-24
CP001013_1798(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 115 3e-24
CP000393_3435(CP000393|pid:none) Trichodesmium erythraeum IMS101... 115 3e-24
AM746676_4559(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 115 3e-24
(Q9VZF4) RecName: Full=F-box/WD repeat-containing protein 7; Alt... 115 3e-24
CP001037_1947(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 115 3e-24
BA000045_2244(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 115 3e-24
(Q8H0T9) RecName: Full=Katanin p80 WD40 repeat-containing subuni... 115 3e-24
CP000117_2876(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 115 4e-24
AX722159_1(AX722159|pid:none) Sequence 17 from Patent WO03024999... 115 4e-24
AP007169_1(AP007169|pid:none) Aspergillus oryzae RIB40 genomic D... 115 4e-24
AK032174_1(AK032174|pid:none) Mus musculus adult male olfactory ... 115 4e-24
(Q969H0) RecName: Full=F-box/WD repeat-containing protein 7; Alt... 115 4e-24
AK223449_1(AK223449|pid:none) Homo sapiens mRNA for F-box protei... 115 4e-24
AF383178_1(AF383178|pid:none) Homo sapiens F-box protein FBX30 m... 115 4e-24
CR859650_1(CR859650|pid:none) Pongo abelii mRNA; cDNA DKFZp459C1... 114 6e-24
AK105499_1(AK105499|pid:none) Oryza sativa Japonica Group cDNA c... 114 6e-24
BA000045_725(BA000045|pid:none) Gloeobacter violaceus PCC 7421 D... 114 6e-24
BC037320_1(BC037320|pid:none) Homo sapiens F-box and WD-40 domai... 114 6e-24
CR860672_1(CR860672|pid:none) Pongo abelii mRNA; cDNA DKFZp459M2... 114 6e-24
(Q55563) RecName: Full=Uncharacterized WD repeat-containing prot... 114 8e-24
CP000844_164(CP000844|pid:none) Acaryochloris marina MBIC11017 p... 114 1e-23
FN357410_12(FN357410|pid:none) Schistosoma mansoni genome sequen... 113 1e-23
CU928176_40(CU928176|pid:none) Zygosaccharomyces rouxii strain C... 113 1e-23
CP000854_3359(CP000854|pid:none) Mycobacterium marinum M, comple... 113 2e-23
CP000113_4019(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 113 2e-23
CP001108_1939(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 113 2e-23
CR405685_1(CR405685|pid:none) Zebrafish DNA sequence from clone ... 112 3e-23
CP001291_699(CP001291|pid:none) Cyanothece sp. PCC 7424, complet... 112 3e-23
AM270009_6(AM270009|pid:none) Aspergillus niger contig An02c0140... 112 3e-23
AE010299_2454(AE010299|pid:none) Methanosarcina acetivorans str.... 112 3e-23
CR382136_596(CR382136|pid:none) Debaryomyces hansenii strain CBS... 112 3e-23
FM992691_442(FM992691|pid:none) Candida dubliniensis CD36 chromo... 112 4e-23
AB007645_4(AB007645|pid:none) Arabidopsis thaliana genomic DNA, ... 112 4e-23
AE014297_1106(AE014297|pid:none) Drosophila melanogaster chromos... 112 4e-23
CP000828_4370(CP000828|pid:none) Acaryochloris marina MBIC11017,... 111 5e-23
AL772282_6(AL772282|pid:none) Mouse DNA sequence from clone RP23... 111 5e-23
A96638(A96638) hypothetical protein F11P17.7 [imported] - Arabid... 111 5e-23
BC161681_1(BC161681|pid:none) Xenopus laevis TBP-associated fact... 111 5e-23
(O15736) RecName: Full=Protein tipD; &AF019236_1(AF019236|pid:n... 111 6e-23
CP000099_2768(CP000099|pid:none) Methanosarcina barkeri str. Fus... 111 6e-23
AP008216_940(AP008216|pid:none) Oryza sativa (japonica cultivar-... 111 6e-23
AL392174_12(AL392174|pid:none) Arabidopsis thaliana DNA chromoso... 111 6e-23
BC077273_1(BC077273|pid:none) Xenopus laevis cDNA clone IMAGE:40... 110 8e-23
AY597210_1(AY597210|pid:none) Chlamydomonas reinhardtii katanin ... 110 8e-23
(Q4V7Y7) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 110 8e-23
(Q7ZUV2) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 110 1e-22
CP000496_1022(CP000496|pid:none) Pichia stipitis CBS 6054 chromo... 110 1e-22
CP001337_2947(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 110 1e-22
(Q00659) RecName: Full=Sulfur metabolite repression control prot... 110 1e-22
BC045888_1(BC045888|pid:none) Danio rerio WD repeat domain 51A, ... 109 2e-22
AF1890(AF1890) WD-repeat protein [imported] - Nostoc sp. (strain... 109 2e-22
AY428810_1(AY428810|pid:none) Solanum chacoense notchless-like p... 109 2e-22
AM238664_1098(AM238664|pid:none) Streptomyces ambofaciens ATCC 2... 109 2e-22
CT573213_6188(CT573213|pid:none) Frankia alni str. ACN14A chromo... 109 2e-22
CR812943_6(CR812943|pid:none) Zebrafish DNA sequence from clone ... 109 2e-22
CP001344_3209(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 109 2e-22
BA000012_2184(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 109 2e-22
FM992688_6(FM992688|pid:none) Candida dubliniensis CD36 chromoso... 109 2e-22
CU928165_162(CU928165|pid:none) Kluyveromyces thermotolerans str... 109 2e-22
AB093260_1(AB093260|pid:none) Mus musculus mRNA for mKIAA0696 pr... 108 3e-22
BC034261_1(BC034261|pid:none) Mus musculus F-box and WD-40 domai... 108 3e-22
AK149139_1(AK149139|pid:none) Mus musculus 2 days neonate sympat... 108 3e-22
AM989989_35(AM989989|pid:none) Zygosaccharomyces rouxii strain C... 108 3e-22
AB018110_4(AB018110|pid:none) Arabidopsis thaliana genomic DNA, ... 108 4e-22
CP000089_3569(CP000089|pid:none) Dechloromonas aromatica RCB, co... 108 4e-22
(Q17963) RecName: Full=WD repeat-containing protein tag-125; &T... 108 4e-22
U21220_1(U21220|pid:none) Emericella nidulans sulfur metabolite ... 108 4e-22
AB076893_1(AB076893|pid:none) Ciona intestinalis Ci-betaTrCP mRN... 108 4e-22
CP001037_6(CP001037|pid:none) Nostoc punctiforme PCC 73102, comp... 108 4e-22
(Q6NVM2) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 108 5e-22
AM270178_91(AM270178|pid:none) Aspergillus niger contig An08c023... 107 7e-22
AK088953_1(AK088953|pid:none) Mus musculus 2 days neonate thymus... 107 7e-22
U75309_1(U75309|pid:none) Human TBP-associated factor (hTAFII100... 107 7e-22
BC052268_1(BC052268|pid:none) Homo sapiens TAF5 RNA polymerase I... 107 7e-22
(Q15542) RecName: Full=Transcription initiation factor TFIID sub... 107 7e-22
(Q91854) RecName: Full=Beta-TrCP; AltName: Full=Beta-transducin ... 107 7e-22
(Q2TBP4) RecName: Full=WD repeat-containing protein 51A; &BC109... 107 7e-22
BC156180_1(BC156180|pid:none) Synthetic construct Mus musculus c... 107 7e-22
CP001325_706(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 107 9e-22
AK313417_1(AK313417|pid:none) Homo sapiens cDNA, FLJ93955, highl... 107 9e-22
AB014596_1(AB014596|pid:none) Homo sapiens mRNA for KIAA0696 pro... 107 1e-21
CR749295_1(CR749295|pid:none) Homo sapiens mRNA; cDNA DKFZp781N0... 107 1e-21
AK295870_1(AK295870|pid:none) Homo sapiens cDNA FLJ54002 complet... 107 1e-21
(Q9UKB1) RecName: Full=F-box/WD repeat-containing protein 11; Al... 107 1e-21
BT077645_1(BT077645|pid:none) Lepeophtheirus salmonis clone lsal... 107 1e-21
AK154163_1(AK154163|pid:none) Mus musculus NOD-derived CD11c +ve... 107 1e-21
CP000249_314(CP000249|pid:none) Frankia sp. CcI3, complete genome. 107 1e-21
AF129530_1(AF129530|pid:none) Homo sapiens chromosome 10 F-box p... 107 1e-21
CP000828_3398(CP000828|pid:none) Acaryochloris marina MBIC11017,... 107 1e-21
AB169034_1(AB169034|pid:none) Macaca fascicularis testis cDNA, c... 107 1e-21
AK144091_1(AK144091|pid:none) Mus musculus RCB-0559 K-1 . F1 cDN... 107 1e-21
AB033279_1(AB033279|pid:none) Homo sapiens BTRCP2 mRNA for F-box... 107 1e-21
BC075548_1(BC075548|pid:none) Xenopus tropicalis MGC89488 protei... 107 1e-21
AE016818_101(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 106 2e-21
AM778942_51(AM778942|pid:none) Microcystis aeruginosa PCC 7806 g... 106 2e-21
AJ011376_1(AJ011376|pid:none) Homo sapiens mRNA for hypothetical... 106 2e-21
(Q2KIG2) RecName: Full=WD repeat-containing protein 5; &BC11265... 106 2e-21
CP000117_1621(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 106 2e-21
AJ721075_1(AJ721075|pid:none) Gallus gallus mRNA for hypothetica... 106 2e-21
(Q8C092) RecName: Full=Transcription initiation factor TFIID sub... 106 2e-21
BC045356_1(BC045356|pid:none) Danio rerio F-box and WD-40 domain... 106 2e-21
BC052124_1(BC052124|pid:none) Danio rerio WD repeat domain 5, mR... 106 2e-21
(Q5M786) RecName: Full=WD repeat-containing protein 5; &BC08100... 106 2e-21
AM920435_1436(AM920435|pid:none) Penicillium chrysogenum Wiscons... 106 2e-21
(Q90ZL4) RecName: Full=Lissencephaly-1 homolog B; &AY032881_1(A... 106 2e-21
AK075289_1(AK075289|pid:none) Homo sapiens cDNA FLJ90808 fis, cl... 106 2e-21
AF098070_1(AF098070|pid:none) Drosophila melanogaster Lis1 homol... 106 2e-21
(Q7KNS3) RecName: Full=Lissencephaly-1 homolog; Short=L... 106 2e-21
BC044710_1(BC044710|pid:none) Xenopus laevis Notchless gene homo... 105 3e-21
BC077844_1(BC077844|pid:none) Xenopus laevis WD repeat domain 5,... 105 3e-21
CU928165_278(CU928165|pid:none) Kluyveromyces thermotolerans str... 105 3e-21
AJ575934_4(AJ575934|pid:none) Micromonospora purpurea DOS biosyn... 105 3e-21
(P74442) RecName: Full=Uncharacterized WD repeat-containing prot... 105 3e-21
AJ628149_32(AJ628149|pid:none) Micromonospora echinospora genomi... 105 3e-21
CP000383_3602(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 105 3e-21
BC168104_1(BC168104|pid:none) Xenopus tropicalis cDNA clone MGC:... 105 3e-21
BC110877_1(BC110877|pid:none) Homo sapiens WD repeat domain 51A,... 105 3e-21
AP007169_371(AP007169|pid:none) Aspergillus oryzae RIB40 genomic... 105 3e-21
(Q5RE95) RecName: Full=WD repeat-containing protein 5B; &CR8576... 105 3e-21
BC119693_1(BC119693|pid:none) Homo sapiens WD repeat domain 51A,... 105 3e-21
CP000820_6355(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 105 3e-21
AE016818_604(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 105 5e-21
BA000039_488(BA000039|pid:none) Thermosynechococcus elongatus BP... 105 5e-21
BC123621_1(BC123621|pid:none) Bos taurus beta-transducin repeat ... 105 5e-21
AK147793_1(AK147793|pid:none) Mus musculus melanocyte cDNA, RIKE... 105 5e-21
AF052432_1(AF052432|pid:none) Homo sapiens katanin p80 subunit m... 105 5e-21
FN357618_1(FN357618|pid:none) Schistosoma mansoni genome sequenc... 105 5e-21
AK011064_1(AK011064|pid:none) Mus musculus 13 days embryo liver ... 105 5e-21
AX135807_1(AX135807|pid:none) Sequence 1 from Patent WO0132614. 105 5e-21
AP007159_126(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 104 6e-21
FN313599_1(FN313599|pid:none) Schistosoma japonicum isolate Anhu... 104 6e-21
CP000591_80(CP000591|pid:none) Ostreococcus lucimarinus CCE9901 ... 104 6e-21
AM462218_2(AM462218|pid:none) Vitis vinifera contig VV78X125617.... 104 6e-21
CU633900_125(CU633900|pid:none) Podospora anserina genomic DNA c... 104 6e-21
BA000045_2655(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 104 6e-21
CP001291_5177(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 104 6e-21
BT065868_1(BT065868|pid:none) Zea mays full-length cDNA clone ZM... 104 6e-21
AB070844_1(AB070844|pid:none) Aspergillus oryzae sconB gene for ... 104 6e-21
CP000393_3924(CP000393|pid:none) Trichodesmium erythraeum IMS101... 104 6e-21
AP007159_390(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 104 8e-21
BT045543_1(BT045543|pid:none) Salmo salar clone ssal-rgf-524-224... 104 8e-21
(Q8BG40) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 104 8e-21
(Q9BVA0) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 104 8e-21
AK010364_1(AK010364|pid:none) Mus musculus ES cells cDNA, RIKEN ... 104 8e-21
AF326339_1(AF326339|pid:none) Aedes aegypti unknown protein i8 m... 104 8e-21
(P39014) RecName: Full=F-box protein MET30; AltName: Full=Methio... 104 8e-21
AK031630_1(AK031630|pid:none) Mus musculus 13 days embryo male t... 104 8e-21
AY891382_1(AY891382|pid:none) Synthetic construct Homo sapiens c... 104 8e-21
L26505_1(L26505|pid:none) Saccharomyces cerevisiae Met30p gene, ... 104 8e-21
BC149991_1(BC149991|pid:none) Bos taurus katanin p80 (WD repeat ... 103 1e-20
AJ719544_1(AJ719544|pid:none) Gallus gallus mRNA for hypothetica... 103 1e-20
AK090114_1(AK090114|pid:none) Mus musculus RCB-1283 B16 melanoma... 103 1e-20
CP001037_2838(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 103 1e-20
(Q9FLX9) RecName: Full=Notchless protein homolog; &AB009055_3(A... 103 1e-20
BT080073_1(BT080073|pid:none) Esox lucius clone eluc-evq-506-011... 103 1e-20
(Q9PTR5) RecName: Full=Platelet-activating factor acetylhydrolas... 103 1e-20
AY038079_1(AY038079|pid:none) Mus musculus F-box/WD40 repeat-con... 103 1e-20
S36113(S36113)LIS-1 protein - human 103 1e-20
AF016369_1(AF016369|pid:none) Homo sapiens U4/U6 small nuclear r... 103 1e-20
AL449305_7(AL449305|pid:none) Human DNA sequence from clone RP11... 103 1e-20
AE013599_2876(AE013599|pid:none) Drosophila melanogaster chromos... 103 1e-20
(P43034) RecName: Full=Platelet-activating factor acetylhydrolas... 103 1e-20
CU633438_311(CU633438|pid:none) Podospora anserina genomic DNA c... 103 1e-20
(Q5REG7) RecName: Full=Platelet-activating factor acetylhydrolas... 103 1e-20
(P43033) RecName: Full=Platelet-activating factor acetylhydrolas... 103 1e-20
AK167824_1(AK167824|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 103 1e-20
(Q8BHD1) RecName: Full=WD repeat-containing protein 51B; &AK045... 103 1e-20
AP007175_233(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 103 1e-20
CR457105_1(CR457105|pid:none) Homo sapiens full open reading fra... 103 1e-20
AY064077_1(AY064077|pid:none) Aedes aegypti clone unKRc2 unknown... 103 1e-20
FM992688_103(FM992688|pid:none) Candida dubliniensis CD36 chromo... 103 2e-20
BC056809_1(BC056809|pid:none) Danio rerio F-box and WD-40 domain... 103 2e-20
BT075125_1(BT075125|pid:none) Osmerus mordax clone omor-eva-518-... 103 2e-20
CP000393_3433(CP000393|pid:none) Trichodesmium erythraeum IMS101... 103 2e-20
BC085125_1(BC085125|pid:none) Rattus norvegicus beta-transducin ... 103 2e-20
AE014296_3092(AE014296|pid:none) Drosophila melanogaster chromos... 103 2e-20
AY130394_1(AY130394|pid:none) Petromyzon marinus guanine nucleot... 103 2e-20
AK313131_1(AK313131|pid:none) Homo sapiens cDNA, FLJ93619, highl... 103 2e-20
CP000502_174(CP000502|pid:none) Pichia stipitis CBS 6054 chromos... 103 2e-20
AK156660_1(AK156660|pid:none) Mus musculus activated spleen cDNA... 103 2e-20
AF081887_1(AF081887|pid:none) Mus musculus ubiquitin ligase FWD1... 103 2e-20
CT573213_3533(CT573213|pid:none) Frankia alni str. ACN14A chromo... 103 2e-20
AK002149_1(AK002149|pid:none) Homo sapiens cDNA FLJ11287 fis, cl... 103 2e-20
CP001577_363(CP001577|pid:none) Micromonas sp. RCC299 chromosome... 103 2e-20
FJ527023_1(FJ527023|pid:none) Macaca mulatta transducin (beta)-l... 102 2e-20
CU633438_612(CU633438|pid:none) Podospora anserina genomic DNA c... 102 2e-20
FN317177_1(FN317177|pid:none) Schistosoma japonicum isolate Anhu... 102 2e-20
CU928165_28(CU928165|pid:none) Kluyveromyces thermotolerans stra... 102 2e-20
AY159316_1(AY159316|pid:none) Homo sapiens lung cancer oncogene ... 102 3e-20
CP000686_3299(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 102 3e-20
(Q9GL51) RecName: Full=Platelet-activating factor acetylhydrolas... 102 3e-20
BC150407_1(BC150407|pid:none) Danio rerio guanine nucleotide bin... 102 3e-20
BT045765_1(BT045765|pid:none) Salmo salar clone ssal-rgf-530-312... 102 3e-20
(P63243) RecName: Full=Guanine nucleotide-binding protein subuni... 102 3e-20
AP007151_34(AP007151|pid:none) Aspergillus oryzae RIB40 genomic ... 102 3e-20
(Q803D2) RecName: Full=Lissencephaly-1 homolog B; &BC044530_1(B... 102 3e-20
AM270328_15(AM270328|pid:none) Aspergillus niger contig An15c001... 102 4e-20
(P87053) RecName: Full=F-box/WD repeat-containing protein pof1; ... 102 4e-20
CP001100_2468(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 102 4e-20
(Q9DAW6) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp... 102 4e-20
AP004312_39(AP004312|pid:none) Synechocystis sp. PCC 6803 plasmi... 102 4e-20
D29802_1(D29802|pid:none) Mus musculus p205 mRNA for G protein b... 101 5e-20
AE2490(AE2490) WD-repeat protein [imported] - Nostoc sp. (strain... 101 5e-20
CT573213_677(CT573213|pid:none) Frankia alni str. ACN14A chromos... 101 5e-20
AB007873_1(AB007873|pid:none) Homo sapiens KIAA0413 mRNA, partia... 101 5e-20
AK222488_1(AK222488|pid:none) Homo sapiens mRNA for guanine nucl... 101 5e-20
AB246881_1(AB246881|pid:none) Lethenteron japonicum GNB2L1 mRNA ... 101 5e-20
CP000117_4784(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 101 5e-20
AF032878_1(AF032878|pid:none) Drosophila melanogaster Slimb (sli... 101 7e-20
BC051783_1(BC051783|pid:none) Danio rerio small nuclear ribonucl... 101 7e-20
AY694127_4(AY694127|pid:none) Gallus gallus cosmid c12.1 chromos... 101 7e-20
CU633895_601(CU633895|pid:none) Podospora anserina genomic DNA c... 101 7e-20
AM270005_42(AM270005|pid:none) Aspergillus niger contig An02c010... 101 7e-20
(Q3MHE2) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp... 101 7e-20
FJ195366_9(FJ195366|pid:none) Bos taurus Y-linked ubiquitin-spec... 101 7e-20
FN357843_1(FN357843|pid:none) Schistosoma mansoni genome sequenc... 101 7e-20
BC102286_1(BC102286|pid:none) Bos taurus guanine nucleotide bind... 100 9e-20
AP007175_253(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 100 9e-20
AF001687_1(AF001687|pid:none) Homo sapiens U4/U6 snRNP 60 kDa pr... 100 9e-20
AF299085_1(AF299085|pid:none) Myxococcus xanthus Bap1 (bap1) gen... 100 9e-20
CU633901_36(CU633901|pid:none) Podospora anserina genomic DNA ch... 100 9e-20
EU290652_1(EU290652|pid:none) Sander vitreus receptor for activa... 100 9e-20
CP000119_93(CP000119|pid:none) Anabaena variabilis ATCC 29413 pl... 100 9e-20
AF339101_1(AF339101|pid:none) Heterodera glycines beta-transduci... 100 9e-20
AJ252128_1(AJ252128|pid:none) Yarrowia lipolytica tup1 gene for ... 100 9e-20
AF112979_1(AF112979|pid:none) Mus musculus beta-transducin repea... 100 1e-19
BC145995_1(BC145995|pid:none) Mus musculus WD repeat domain 69, ... 100 1e-19
AM746676_4558(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 100 1e-19
AK016977_1(AK016977|pid:none) Mus musculus adult male testis cDN... 100 1e-19
AY588074_1(AY588074|pid:none) Homalodisca coagulata putative act... 100 1e-19
BT043532_1(BT043532|pid:none) Salmo salar clone HM4_1707 guanine... 100 1e-19
AK031937_1(AK031937|pid:none) Mus musculus adult male medulla ob... 100 1e-19
AM778930_22(AM778930|pid:none) Microcystis aeruginosa PCC 7806 g... 100 1e-19
L13387_1(L13387|pid:none) Homo sapiens (clone 6-1) Miller-Dieker... 100 1e-19
BC008547_1(BC008547|pid:none) Mus musculus WD repeat domain 5, m... 100 2e-19
(Q9D994) RecName: Full=WD repeat-containing protein 38; &AK0072... 100 2e-19
AK030547_1(AK030547|pid:none) Mus musculus adult male pituitary ... 100 2e-19
AY249909_1(AY249909|pid:none) Oryctolagus cuniculus G-protein be... 100 2e-19
BC167084_1(BC167084|pid:none) Rattus norvegicus transducin (beta... 100 2e-19
(Q9QXE7) RecName: Full=F-box-like/WD repeat-containing protein T... 100 2e-19
AB089281_1(AB089281|pid:none) Mamestra brassicae mRNA for recept... 100 2e-19
(Q9BQ87) RecName: Full=F-box-like/WD repeat-containing protein T... 100 2e-19
FJ532265_1(FJ532265|pid:none) Gorilla gorilla isolate PR00573 tr... 100 2e-19
AF005740_1(AF005740|pid:none) Kluyveromyces lactis transcription... 100 2e-19
AL603745_5(AL603745|pid:none) Mouse DNA sequence from clone RP23... 100 2e-19
DQ885470_1(DQ885470|pid:none) Blattella germanica receptor for a... 100 2e-19
CR382136_634(CR382136|pid:none) Debaryomyces hansenii strain CBS... 100 2e-19
CP001037_2020(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 99 3e-19
CR382137_211(CR382137|pid:none) Debaryomyces hansenii strain CBS... 99 3e-19
AF391290_3(AF391290|pid:none) Branchiostoma floridae cosmid MPMG... 99 3e-19
AP008931_213(AP008931|pid:none) Rhodococcus erythropolis PR4 pla... 99 3e-19
AF326340_1(AF326340|pid:none) Aedes aegypti unknown protein i8 m... 99 3e-19
(Q8VEJ4) RecName: Full=Notchless protein homolog 1; &BC018399_1... 99 3e-19
CP000501_7(CP000501|pid:none) Pichia stipitis CBS 6054 chromosom... 99 3e-19
AY342000_1(AY342000|pid:none) Oreochromis mossambicus receptor f... 99 3e-19
DQ073455_1(DQ073455|pid:none) Choristoneura fumiferana activated... 99 3e-19
BT047461_1(BT047461|pid:none) Salmo salar clone ssal-rgb2-603-17... 99 3e-19
BC056720_1(BC056720|pid:none) Danio rerio PRP4 pre-mRNA processi... 99 3e-19
AY223237_1(AY223237|pid:none) Schistosoma japonicum clone ZZD369... 99 3e-19
AM920427_459(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 99 3e-19
AK147309_1(AK147309|pid:none) Mus musculus adult male brain UNDE... 99 3e-19
AK304508_1(AK304508|pid:none) Homo sapiens cDNA FLJ57449 complet... 99 3e-19
AK298210_1(AK298210|pid:none) Homo sapiens cDNA FLJ60756 complet... 99 3e-19
EF569136_1(EF569136|pid:none) Penaeus monodon receptor for activ... 99 3e-19
AL050352_7(AL050352|pid:none) Arabidopsis thaliana DNA chromosom... 99 4e-19
AJ719967_1(AJ719967|pid:none) Gallus gallus mRNA for hypothetica... 99 4e-19
AB189027_1(AB189027|pid:none) Plutella xylostella mRNA for recep... 99 4e-19
CP000251_3439(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 99 4e-19
(Q93847) RecName: Full=Uncharacterized WD repeat-containing prot... 98 6e-19
DQ863323_1(DQ863323|pid:none) Penicillium marneffei STE4-like pr... 98 6e-19
CP001291_2539(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 98 6e-19
(Q6PE01) RecName: Full=U5 small nuclear ribonucleoprotein 40 kDa... 98 6e-19
CU928176_715(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 98 6e-19
AE014296_2596(AE014296|pid:none) Drosophila melanogaster chromos... 98 6e-19
CP000501_12(CP000501|pid:none) Pichia stipitis CBS 6054 chromoso... 98 7e-19
U57061_1(U57061|pid:none) Neurospora crassa rco-1 gene, complete... 98 7e-19
AK170853_1(AK170853|pid:none) Mus musculus NOD-derived CD11c +ve... 98 7e-19
(P16649) RecName: Full=General transcriptional corepressor TUP1;... 98 7e-19
BT052263_1(BT052263|pid:none) Medicago truncatula clone MTYF9_FA... 98 7e-19
M31733_1(M31733|pid:none) S.cerevisiae TUP1 protein gene, comple... 98 7e-19
AF056182_1(AF056182|pid:none) Emericella nidulans G-protein beta... 98 7e-19
AB174186_1(AB174186|pid:none) Macaca fascicularis brain cDNA clo... 98 7e-19
CR380959_230(CR380959|pid:none) Candida glabrata strain CBS138 c... 98 7e-19
X16365_1(X16365|pid:none) Yeast suppressor gene for flocculation... 98 7e-19
AP007164_19(AP007164|pid:none) Aspergillus oryzae RIB40 genomic ... 98 7e-19
AY130395_1(AY130395|pid:none) Scyliorhinus canicula guanine nucl... 98 7e-19
CR382128_858(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 97 1e-18
AK290962_1(AK290962|pid:none) Homo sapiens cDNA FLJ76168 complet... 97 1e-18
(Q5JTN6) RecName: Full=WD repeat-containing protein 38; &AL3549... 97 1e-18
AC117075_70(AC117075|pid:none) Dictyostelium discoideum chromoso... 97 1e-18
AY738474_1(AY738474|pid:none) Gemmata sp. Wa1-1 WD-repeat protei... 97 1e-18
CP001291_1475(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 97 1e-18
BC032708_1(BC032708|pid:none) Homo sapiens transducin (beta)-lik... 97 1e-18
CU633900_516(CU633900|pid:none) Podospora anserina genomic DNA c... 97 1e-18
(Q8W1K8) RecName: Full=Protein Mut11; AltName: Full=Mut11p; &AF... 97 1e-18
(Q5ZIU8) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 97 1e-18
(Q09715) RecName: Full=Transcriptional repressor tup11; &CU3296... 97 1e-18
DQ410670_1(DQ410670|pid:none) Gallus gallus brain p80 katanin mR... 97 1e-18
BC045034_1(BC045034|pid:none) Xenopus laevis U5 snRNP-specific 4... 97 1e-18
EF070464_1(EF070464|pid:none) Maconellicoccus hirsutus clone WHM... 97 2e-18
FJ943495_1(FJ943495|pid:none) Bombyx mori receptor for activated... 97 2e-18
AP009552_3560(AP009552|pid:none) Microcystis aeruginosa NIES-843... 97 2e-18
AL592382_2(AL592382|pid:none) Pneumocystis carinii telomeric cos... 97 2e-18
(Q5RD06) RecName: Full=WD repeat-containing protein 51B; &CR858... 96 2e-18
AY608603_1(AY608603|pid:none) Exophiala dermatitidis Tup1p gene,... 96 2e-18
BT064699_1(BT064699|pid:none) Zea mays full-length cDNA clone ZM... 96 2e-18
AY082798_1(AY082798|pid:none) Penicillium marneffei TupA protein... 96 2e-18
AF105259_1(AF105259|pid:none) Xenopus laevis activated protein k... 96 2e-18
FN357548_40(FN357548|pid:none) Schistosoma mansoni genome sequen... 96 2e-18
AL929389_1(AL929389|pid:none) Zebrafish DNA sequence from clone ... 96 2e-18
AF091120_1(AF091120|pid:none) Filobasidiella neoformans G-protei... 96 2e-18

>EF677877_1(EF677877|pid:none) Picea sitchensis clone WS0277_A02
unknown mRNA.
Length = 399

Score = 278 bits (712), Expect = 2e-73
Identities = 130/336 (38%), Positives = 209/336 (62%), Gaps = 1/336 (0%)
Frame = +2

Query: 251 SVQGFFEHTDSVYCVSINKTFPDIIATGGGDDVAYLWDLNSGEKVHQLKGHSDSISSIEF 430
++ F H D+++ V+ + +A+GGGDD A++W + +LKGH+DS+ ++ F
Sbjct: 62 AIHTFEGHEDTLFAVACSPVDATWVASGGGDDKAFMWRIGHTTPFFELKGHTDSVVALSF 121

Query: 431 NYDGKLVATGGMDGIVKVWDVQTGNLLINLEGPTESVEWIQWHSKGNILLAGSSDCLGFM 610
+ DG L+A+GG+DG+V++WD TGNL+ L+GP +EW++WH KG ++LAGS D +M
Sbjct: 122 SNDGLLLASGGLDGVVRIWDASTGNLIHVLDGPGGGIEWVRWHPKGQLVLAGSEDYTTWM 181

Query: 611 WSTLKGDILGTFAGHSGPVTCGMFTPDGKKVITGSEDCSIKVWNPKDSSNIMSFSGHGFH 790
W+ G L + GHS VTCG FTPDGK + TGS D S++VWNP+ + ++ GH +H
Sbjct: 182 WNADLGKCLSVYTGHSESVTCGDFTPDGKTICTGSADGSLRVWNPQTQESKLTVKGHPYH 241

Query: 791 EKIITCLDIKNDNTLVLSGGDDHYAVLSNINTGKVIGKLHGHTDSIVAVSMSNHNQSFCH 970
+ +TCL+I +D+TLV+SG + + NI GKV+G L GH+ SI V S + ++
Sbjct: 242 TEGLTCLNISSDSTLVVSGSTEGSVHVVNIKNGKVVGSLVGHSGSIECVGFS-PSLTWVA 300

Query: 971 TGSLDGSIRVWDMNTLQQRSTFKHKSSITKLKSHPHEPLLFSSSVDKSIGVWDERNGQLI 1150
TG +D + +W++ + R T +H+ + +L + S+S+D + +WD R+G
Sbjct: 301 TGGMDKKLMIWELQSSSLRCTCQHEEGVMRLSWSSSSRHIISASLDGIVRLWDSRSGVCE 360

Query: 1151 KQFTGHQDAILDFDITLDGK-VVTASDXKVSLVFSL 1255
+ F GH D+I D IT+D + ++T SD K + VF +
Sbjct: 361 RVFQGHSDSIQDMAITVDQRFILTGSDDKTAKVFEI 396

Score = 42.0 bits (97), Expect = 0.048
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +2

Query: 269 EHTDSVYCVSINKTFPDIIATGGGDDVAYLWDLNSGEKVHQLKGHSDSISSIEFNYDGKL 448
+H + V +S + + II+ D + LWD SG +GHSDSI + D +
Sbjct: 323 QHEEGVMRLSWSSSSRHIISASL-DGIVRLWDSRSGVCERVFQGHSDSIQDMAITVDQRF 381

Query: 449 VATGGMDGIVKVWDVQ 496
+ TG D KV++++
Sbjct: 382 ILTGSDDKTAKVFEIE 397

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,677,501,604
Number of extensions: 30774458
Number of successful extensions: 144970
Number of sequences better than 10.0: 5198
Number of HSP's gapped: 114320
Number of HSP's successfully gapped: 17622
Length of query: 428
Length of database: 1,040,966,779
Length adjustment: 131
Effective length of query: 297
Effective length of database: 621,205,444
Effective search space: 184498016868
Effective search space used: 184498016868
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.09 alm: 0.42 top: 0.53 tms: 0.00 mit: 0.22 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

52.0 %: nuclear
32.0 %: cytoplasmic
4.0 %: cytoskeletal
4.0 %: vacuolar
4.0 %: mitochondrial
4.0 %: Golgi

>> prediction for Contig-U10384-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 2
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0