Contig-U10359-1
Contig ID Contig-U10359-1
Contig update 2002. 9.13
Contig sequence
>Contig-U10359-1 (Contig-U10359-1Q) /CSM_Contig/Contig-U10359-1Q.Seq.d
AAGAGAAATTCCTAACTGTTACAGAGCCACAATCATGGAAATTCTCACCA
GATGCAAAGTATGTCCACTATTGTGATAATGAAACCATTCATGGTATTGA
AATGCCAATTTCAACACCTGATCATTTACCATCAAATCTTATCAAAGTTT
GTGATATGTCTTCAAACTTTTTATCAAAACCAATCGATGTCAATAAATTT
GATTTAATTTTCGCAGGTGCTCAAAAAAATGCTGGTATCTCTGGTATTAC
AATAGTTATAATTAAAAAATCTTTATTATTAAAAACAAAACCAAATGTAC
CTTCAGTTTTTAATTTTTTAAAAAAAAGTCAAAATAATTCATTAGATAAT
ACACCACCAACATTTAATATTTATATTACAGGATTAATATTGAAATGGAT
TATTAATAAAGGTGGTTTAAGTGAAATTGAAAAATTAAATATTGCAAAAG
CACATGCACTTTATGAATATATTGATAATTCAAATAGTTTCTATAAATGT
TCAATCGATAAGAACTATAGATCAAGAATGAATGTTGTATTTAGAATTCA
AGATGGTAATACTGAATTGGAAGAGAAATTCATTAAAGAAGCTTCAAAAG
AAAATATCACCGATATTAAAGGTCATAGCTACTGTTGGTGGTTTAAGAGT
TTCTTTATATAATGCAATCACTATTGATCAAACTTTAATTTTAATTAATT
TTATNCACAAATTTTCATAATAATAATAAATAAAATTTAAAAATAAAAAT
AAAAATAAAACCA

Gap no gap
Contig length 763
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 3916398
End point 3917161
Strand (PLUS/MINUS) PLUS
Number of clones 4
Number of EST 4
Link to clone list U10359
List of clone(s)

est1=VFG667Z,1,726
est2=VFG512Z,43,764
est3=VFA471Z,212,446
est4=VFM358Z,337,705
Translated Amino Acid sequence
EKFLTVTEPQSWKFSPDAKYVHYCDNETIHGIEMPISTPDHLPSNLIKVCDMSSNFLSKP
IDVNKFDLIFAGAQKNAGISGITIVIIKKSLLLKTKPNVPSVFNFLKKSQNNSLDNTPPT
FNIYITGLILKWIINKGGLSEIEKLNIAKAHALYEYIDNSNSFYKCSIDKNYRSRMNVVF
RIQDGNTELEEKFIKEASKENITDIKGHSYCWWFKSFFI*cnhy*snfnfn*fyxqifii
iinki*k*k*k*n


Translated Amino Acid sequence (All Frames)
Frame A:
krns*llqshnhgnshqmqsmstivimkpfmvlkcqfqhliiyhqilskfviclqtfyqn
qsmsinli*fsqvlkkmlvslvlq*l*lknlyy*kqnqmylqflif*kkvkiih*iihhq
hlifilqd*y*ngllikvv*vklkn*ilqkhmhfmniliiqivsinvqsirtidqe*mly
lefkmvilnwkrnslkklqkkispilkviatvgglrvslynaitidqtlilinfxhkfs*
***ikfknknknkt


Frame B:
reipncyratimeiltrckvcpll***nhswy*nanfnt*sftiksyqsl*yvfklfikt
nrcq*i*fnfrrcskkcwylwyynsyn*kifiiknktkctfsf*ffkkksk*fir*yttn
i*ylyyriniemdy**rwfk*n*kikyckstctl*iy**fk*fl*mfnr*el*iknecci
*nsrw*y*igreih*rsfkrkyhry*rs*lllvv*eflyimqsllikl*f*lilxtnfhn
nnk*nlkikikikp


Frame C:
EKFLTVTEPQSWKFSPDAKYVHYCDNETIHGIEMPISTPDHLPSNLIKVCDMSSNFLSKP
IDVNKFDLIFAGAQKNAGISGITIVIIKKSLLLKTKPNVPSVFNFLKKSQNNSLDNTPPT
FNIYITGLILKWIINKGGLSEIEKLNIAKAHALYEYIDNSNSFYKCSIDKNYRSRMNVVF
RIQDGNTELEEKFIKEASKENITDIKGHSYCWWFKSFFI*cnhy*snfnfn*fyxqifii
iinki*k*k*k*n


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U10359-1 (Contig-U10359-1Q)
/CSM_Contig/Contig-U10359-1Q.Seq.d
(763 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U10359-1 (Contig-U10359-1Q) /CSM_Contig/Conti... 698 0.0
Contig-U14591-1 (Contig-U14591-1Q) /CSM_Contig/Conti... 44 2e-04
Contig-U12912-1 (Contig-U12912-1Q) /CSM_Contig/Conti... 36 0.054
Contig-U11472-1 (Contig-U11472-1Q) /CSM_Contig/Conti... 36 0.054
Contig-U11368-1 (Contig-U11368-1Q) /CSM_Contig/Conti... 36 0.054
Contig-U09342-1 (Contig-U09342-1Q) /CSM_Contig/Conti... 36 0.054
Contig-U00724-1 (Contig-U00724-1Q) /CSM_Contig/Conti... 36 0.054
Contig-U12535-1 (Contig-U12535-1Q) /CSM_Contig/Conti... 34 0.21
Contig-U12096-1 (Contig-U12096-1Q) /CSM_Contig/Conti... 34 0.21

>Contig-U10359-1 (Contig-U10359-1Q) /CSM_Contig/Contig-U10359-1Q.Seq.d
Length = 763

Score = 698 bits (352), Expect = 0.0
Identities = 352/352 (100%)
Strand = Plus / Plus


Query: 328 gtcaaaataattcattagataatacaccaccaacatttaatatttatattacaggattaa 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gtcaaaataattcattagataatacaccaccaacatttaatatttatattacaggattaa 387


Query: 388 tattgaaatggattattaataaaggtggtttaagtgaaattgaaaaattaaatattgcaa 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tattgaaatggattattaataaaggtggtttaagtgaaattgaaaaattaaatattgcaa 447


Query: 448 aagcacatgcactttatgaatatattgataattcaaatagtttctataaatgttcaatcg 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 aagcacatgcactttatgaatatattgataattcaaatagtttctataaatgttcaatcg 507


Query: 508 ataagaactatagatcaagaatgaatgttgtatttagaattcaagatggtaatactgaat 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ataagaactatagatcaagaatgaatgttgtatttagaattcaagatggtaatactgaat 567


Query: 568 tggaagagaaattcattaaagaagcttcaaaagaaaatatcaccgatattaaaggtcata 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tggaagagaaattcattaaagaagcttcaaaagaaaatatcaccgatattaaaggtcata 627


Query: 628 gctactgttggtggtttaagagtttctttatataatgcaatcactattgatc 679
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gctactgttggtggtttaagagtttctttatataatgcaatcactattgatc 679


Score = 565 bits (285), Expect = e-161
Identities = 299/306 (97%)
Strand = Plus / Plus


Query: 1 aagagaaattcctaactgttacagagccacaatcatggaaattctcaccagatgcaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagagaaattcctaactgttacagagccacaatcatggaaattctcaccagatgcaaagt 60


Query: 61 atgtccactattgtgataatgaaaccattcatggtattgaaatgccaatttcaacacctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgtccactattgtgataatgaaaccattcatggtattgaaatgccaatttcaacacctg 120


Query: 121 atcatttaccatcaaatcttatcaaagtttgtgatatgtcttcaaactttttatcaaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcatttaccatcaaatcttatcaaagtttgtgatatgtcttcaaactttttatcaaaac 180


Query: 181 caatcgatgtcaataaatttgatttaattttcgcaggtgctcnnnnnnntgctggtatct 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 181 caatcgatgtcaataaatttgatttaattttcgcaggtgctcaaaaaaatgctggtatct 240


Query: 241 ctggtattacaatagttataattaaaaaatctttattattaaaaacaaaaccaaatgtac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctggtattacaatagttataattaaaaaatctttattattaaaaacaaaaccaaatgtac 300


Query: 301 cttcag 306
||||||
Sbjct: 301 cttcag 306


>Contig-U14591-1 (Contig-U14591-1Q) /CSM_Contig/Contig-U14591-1Q.Seq.d
Length = 200

Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus


Query: 260 aattaaaaaatctttattatta 281
||||||||||||||||||||||
Sbjct: 96 aattaaaaaatctttattatta 75


>Contig-U12912-1 (Contig-U12912-1Q) /CSM_Contig/Contig-U12912-1Q.Seq.d
Length = 725

Score = 36.2 bits (18), Expect = 0.054
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 339 tcattagataatacaccaccaa 360
||||| ||||||||||||||||
Sbjct: 236 tcattcgataatacaccaccaa 257


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,659
Number of Sequences: 6905
Number of extensions: 14659
Number of successful extensions: 1741
Number of sequences better than 10.0: 192
length of query: 763
length of database: 5,674,871
effective HSP length: 16
effective length of query: 747
effective length of database: 5,564,391
effective search space: 4156600077
effective search space used: 4156600077
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.19
Homology vs DNA
Query= Contig-U10359-1 (Contig-U10359-1Q) /CSM_Contig/Contig-U10359-1Q.Seq.d
(763 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ431543) Dictyostelium discoideum cDNA clone:ddv14e18, 3' ... 597 0.0 4
(BJ431406) Dictyostelium discoideum cDNA clone:ddv14g03, 3' ... 589 0.0 4
(BJ434950) Dictyostelium discoideum cDNA clone:ddv25d15, 3' ... 371 e-153 2
(BJ428913) Dictyostelium discoideum cDNA clone:ddv1n18, 3' e... 230 6e-66 2
(FE233069) CAPG2086.rev CAPG Naegleria gruberi amoeba stage ... 44 2e-08 3
(ES634902) NVPAZ53TR NVPA Nasonia vitripennis cDNA, mRNA seq... 50 3e-05 2
(EB078539) EST1229161 Nasonia vitripennis (wasp) pupal-adult... 50 3e-05 2
(CU639827) Quercus petreae root EST, clone SSH2GFPL3D06. 46 0.001 3
(AM500257) Epiperipatus sp. TB-2001 adult EST, clone bur-ave01. 42 0.002 2
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 38 0.003 8
(ES626054) NGPQP74TR NGPP Nasonia giraulti cDNA, mRNA sequence. 42 0.006 2
(EJ826421) 1093017562306 Global-Ocean-Sampling_GS-30-02-01-1... 36 0.026 3
(CV452491) EST906400 BEA Rhipicephalus microplus cDNA clone ... 52 0.031 1
(CK178779) EST768099 BEA Rhipicephalus microplus cDNA clone ... 52 0.031 1
(AC174547) Strongylocentrotus purpuratus clone R3-3112O6, WO... 44 0.040 4
(EJ250912) 1095344031546 Global-Ocean-Sampling_GS-27-01-01-1... 50 0.12 1
(CT837424) Oryza sativa (indica cultivar-group) cDNA clone:O... 36 0.24 3
(EJ799175) 1093017416829 Global-Ocean-Sampling_GS-30-02-01-1... 34 0.36 2
(ER427390) 1092963759721 Global-Ocean-Sampling_GS-35-01-01-1... 44 0.44 2
(EJ889215) 1093018433502 Global-Ocean-Sampling_GS-30-02-01-1... 36 1.4 2
(ER321515) 1092344181307 Global-Ocean-Sampling_GS-34-01-01-1... 38 1.4 2
(AC194506) Colobus guereza clone CH272-276M10, WORKING DRAFT... 46 1.9 1
(ER324503) 1092344200269 Global-Ocean-Sampling_GS-34-01-01-1... 46 1.9 1
(EK412086) 1095505201423 Global-Ocean-Sampling_GS-31-01-01-1... 46 1.9 1
(EJ690712) 1092956002605 Global-Ocean-Sampling_GS-30-02-01-1... 46 1.9 1
(CC262655) CH261-167P3_Sp6.1 CH261 Gallus gallus genomic clo... 46 1.9 1
(FG796829) G1148P39FF1.T0 Anolis carolinensis pooled normali... 46 1.9 1
(FG756485) G1146P344FL1.T0 Anolis carolinensis pooled normal... 46 1.9 1
(FG719168) G1144P338FA8.T0 Anolis carolinensis pooled normal... 46 1.9 1
(FG674672) G1143P316RB24.T0 Anolis carolinensis pooled norma... 46 1.9 1
(FG674624) G1143P316FB24.T0 Anolis carolinensis pooled norma... 46 1.9 1
(D84452) Bombyx mori mRNA for cyclin B homolog, complete cds. 38 3.5 2
(AM425474) Vitis vinifera contig VV79X004606.5, whole genome... 34 4.0 2
(CT841526) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 4.2 5
(AL732567) Zebrafish DNA sequence from clone CH211-263A23 in... 34 4.5 7
(EV843396) TT1EU27TV Tetrahymena thermophila SB210 cDNA libr... 40 5.0 2
(EK136663) 1095433019317 Global-Ocean-Sampling_GS-31-01-01-1... 36 5.6 2
(EJ059542) 1095456055684 Global-Ocean-Sampling_GS-26-01-01-1... 30 5.8 3
(FD412902) 1106515110448 Cryptosporidium muris (strain RN66)... 38 5.9 2
(AM434308) Vitis vinifera contig VV78X118960.6, whole genome... 42 6.3 2
(AC139357) Mus musculus chromosome 8, clone RP24-335I20, com... 44 7.6 1
(L15314) Caenorhabditis elegans cosmid K06H7, complete seque... 44 7.6 1
(AC117791) Mus musculus clone RP24-548P17, LOW-PASS SEQUENCE... 44 7.6 1
(AC100071) Mus musculus clone RP23-34A8, LOW-PASS SEQUENCE S... 44 7.6 1
(AC095667) Rattus norvegicus clone CH230-8O16, WORKING DRAFT... 44 7.6 1
(CU467561) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 7.6 1
(AC179625) Strongylocentrotus purpuratus clone R3-1028C1, WO... 44 7.6 1
(AC179614) Strongylocentrotus purpuratus clone R3-1028K7, WO... 44 7.6 1
(AC178655) Strongylocentrotus purpuratus clone R3-11O22, WOR... 44 7.6 1
(AC176134) Strongylocentrotus purpuratus clone R3-28C2, WORK... 44 7.6 1
(AC168821) Strongylocentrotus purpuratus clone R3-13E24, WOR... 44 7.6 1
(EJ213490) 1092351017646 Global-Ocean-Sampling_GS-27-01-01-1... 44 7.6 1
(EJ114146) 1092343257657 Global-Ocean-Sampling_GS-27-01-01-1... 44 7.6 1
(EJ101061) 1095469452180 Global-Ocean-Sampling_GS-26-01-01-1... 44 7.6 1
(EJ018102) 1095439022486 Global-Ocean-Sampling_GS-26-01-01-1... 44 7.6 1
(DY897494) SF9L02495 Spodoptera frugiperda cDNA Cell Line Li... 44 7.6 1
(DV574377) 0058P0047A04_5' library 58 - normalized (50 mix p... 44 7.6 1
(DV574376) 0058P0047A04_3' library 58 - normalized (50 mix p... 44 7.6 1
(DT508255) WS02420.BR_H16 PTxD-ICC-N-A-14 Populus trichocarp... 44 7.6 1
(CX658503) PO01035G12 Poplar SC cDNA library Populus alba x ... 44 7.6 1
(CV256529) WS0244.B21_B18 PTxD-ICC-N-A-14 Populus trichocarp... 44 7.6 1
(CK590641) IST_WI5_47671 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590640) IST_WI5_47670 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590639) IST_WI5_47672 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590635) IST_WI5_47676 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590634) IST_WI5_47677 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590633) IST_WI5_47679 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590632) IST_WI5_47678 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590631) IST_WI5_47680 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590630) IST_WI5_47681 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590629) IST_WI5_47682 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590628) IST_WI5_47684 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590627) IST_WI5_47683 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590626) IST_WI5_47685 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590625) IST_WI5_47686 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590624) IST_WI5_47688 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590623) IST_WI5_47687 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590622) IST_WI5_47690 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590621) IST_WI5_47689 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590620) IST_WI5_47691 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590619) IST_WI5_47692 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590618) IST_WI5_47693 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590617) IST_WI5_47695 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590616) IST_WI5_47694 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590614) IST_WI5_47697 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590613) IST_WI5_47699 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590612) IST_WI5_47698 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590611) IST_WI5_47700 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590610) IST_WI5_47702 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590609) IST_WI5_47701 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590608) IST_WI5_47703 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590606) IST_WI5_47704 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK590605) IST_WI5_47706 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK584771) IST_WI5_11323 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK584767) IST_WI5_11319 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK584766) IST_WI5_11317 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK584764) IST_WI5_11315 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK584763) IST_WI5_11313 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK584762) IST_WI5_11312 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1
(CK584759) IST_WI5_11309 AD-ORFeome1.0 library Caenorhabditi... 44 7.6 1

>(BJ431543) Dictyostelium discoideum cDNA clone:ddv14e18, 3' end,
single read.
Length = 721

Score = 597 bits (301), Expect(4) = 0.0
Identities = 301/301 (100%)
Strand = Plus / Minus


Query: 328 gtcaaaataattcattagataatacaccaccaacatttaatatttatattacaggattaa 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gtcaaaataattcattagataatacaccaccaacatttaatatttatattacaggattaa 335


Query: 388 tattgaaatggattattaataaaggtggtttaagtgaaattgaaaaattaaatattgcaa 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tattgaaatggattattaataaaggtggtttaagtgaaattgaaaaattaaatattgcaa 275


Query: 448 aagcacatgcactttatgaatatattgataattcaaatagtttctataaatgttcaatcg 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aagcacatgcactttatgaatatattgataattcaaatagtttctataaatgttcaatcg 215


Query: 508 ataagaactatagatcaagaatgaatgttgtatttagaattcaagatggtaatactgaat 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ataagaactatagatcaagaatgaatgttgtatttagaattcaagatggtaatactgaat 155


Query: 568 tggaagagaaattcattaaagaagcttcaaaagaaaatatcaccgatattaaaggtcata 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 tggaagagaaattcattaaagaagcttcaaaagaaaatatcaccgatattaaaggtcata 95


Query: 628 g 628
|
Sbjct: 94 g 94

Score = 440 bits (222), Expect(4) = 0.0
Identities = 222/222 (100%)
Strand = Plus / Minus


Query: 1 aagagaaattcctaactgttacagagccacaatcatggaaattctcaccagatgcaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aagagaaattcctaactgttacagagccacaatcatggaaattctcaccagatgcaaagt 662


Query: 61 atgtccactattgtgataatgaaaccattcatggtattgaaatgccaatttcaacacctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atgtccactattgtgataatgaaaccattcatggtattgaaatgccaatttcaacacctg 602


Query: 121 atcatttaccatcaaatcttatcaaagtttgtgatatgtcttcaaactttttatcaaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atcatttaccatcaaatcttatcaaagtttgtgatatgtcttcaaactttttatcaaaac 542


Query: 181 caatcgatgtcaataaatttgatttaattttcgcaggtgctc 222
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caatcgatgtcaataaatttgatttaattttcgcaggtgctc 500

Score = 85.7 bits (43), Expect(4) = 0.0
Identities = 43/43 (100%)
Strand = Plus / Minus


Query: 632 ctgttggtggtttaagagtttctttatataatgcaatcactat 674
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 ctgttggtggtttaagagtttctttatataatgcaatcactat 49

Score = 60.0 bits (30), Expect(4) = 0.0
Identities = 30/30 (100%)
Strand = Plus / Minus


Query: 230 tgctggtatctctggtattacaatagttat 259
||||||||||||||||||||||||||||||
Sbjct: 492 tgctggtatctctggtattacaatagttat 463

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 794,240,426
Number of extensions: 49653162
Number of successful extensions: 4098200
Number of sequences better than 10.0: 152
Length of query: 763
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 739
Effective length of database: 97,308,875,965
Effective search space: 71911259338135
Effective search space used: 71911259338135
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.27
Homology vs Protein
Query= Contig-U10359-1 (Contig-U10359-1Q) /CSM_Contig/Contig-U10359-1Q.Seq.d
(763 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(P91856) RecName: Full=Probable phosphoserine aminotransferase; ... 207 3e-56
AY892189_1(AY892189|pid:none) Synthetic construct Homo sapiens c... 204 4e-55
BC150088_1(BC150088|pid:none) Bos taurus phosphoserine aminotran... 204 7e-55
AK090108_1(AK090108|pid:none) Mus musculus RCB-1283 B16 melanoma... 207 1e-54
AB173392_1(AB173392|pid:none) Macaca fascicularis brain cDNA clo... 204 2e-54
BC044467_1(BC044467|pid:none) Danio rerio phosphoserine aminotra... 200 2e-53
(P10658) RecName: Full=Phosphoserine aminotransferase; ... 198 3e-53
BC127350_1(BC127350|pid:none) Xenopus tropicalis phosphoserine a... 199 5e-53
BT074684_1(BT074684|pid:none) Osmerus mordax clone omor-eva-518-... 195 5e-53
AY128340_1(AY128340|pid:none) Arabidopsis thaliana phosphoserine... 193 4e-48
AY087331_1(AY087331|pid:none) Arabidopsis thaliana clone 34272 m... 193 4e-48
(Q96255) RecName: Full=Phosphoserine aminotransferase, chloropla... 193 4e-48
CP001154_1827(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 186 8e-48
CP000510_1082(CP000510|pid:none) Psychromonas ingrahamii 37, com... 182 1e-47
CP001323_136(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 186 2e-47
CP000103_2173(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 181 2e-47
CP001010_1103(CP001010|pid:none) Polynucleobacter necessarius su... 179 4e-47
EU969783_1(EU969783|pid:none) Zea mays clone 335638 phosphoserin... 186 5e-47
BT039719_1(BT039719|pid:none) Zea mays full-length cDNA clone ZM... 186 5e-47
AC007509_3(AC007509|pid:none) Arabidopsis thaliana chromosome 2 ... 189 1e-46
(A6T1G7) RecName: Full=Phosphoserine aminotransferase; ... 180 1e-46
CP000284_1684(CP000284|pid:none) Methylobacillus flagellatus KT,... 187 2e-46
AK228962_1(AK228962|pid:none) Arabidopsis thaliana mRNA for puta... 187 2e-46
(Q7NVP1) RecName: Full=Phosphoserine aminotransferase; ... 177 2e-46
AE017282_1337(AE017282|pid:none) Methylococcus capsulatus str. B... 184 4e-46
AC099401_4(AC099401|pid:none) Oryza sativa (japonica cultivar-gr... 182 7e-46
AM260479_786(AM260479|pid:none) Ralstonia eutropha H16 chromosom... 174 7e-46
CP001321_324(CP001321|pid:none) Haemophilus parasuis SH0165, com... 175 3e-45
CP000583_321(CP000583|pid:none) Ostreococcus lucimarinus CCE9901... 179 3e-45
CP000450_1523(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 176 3e-45
CU466930_946(CU466930|pid:none) Candidatus Cloacamonas acidamino... 180 3e-45
CP000090_2555(CP000090|pid:none) Ralstonia eutropha JMP134 chrom... 172 5e-45
(Q83E12) RecName: Full=Phosphoserine aminotransferase; ... 174 8e-45
(B6J1E0) RecName: Full=Phosphoserine aminotransferase; ... 174 8e-45
(A9NC17) RecName: Full=Phosphoserine aminotransferase; ... 174 8e-45
CP000388_2452(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 170 1e-44
(B2HWW3) RecName: Full=Phosphoserine aminotransferase; ... 172 3e-44
(B2U882) RecName: Full=Phosphoserine aminotransferase; ... 171 5e-44
CU459141_834(CU459141|pid:none) Acinetobacter baumannii str. AYE... 171 5e-44
(A3M7Z0) RecName: Full=Phosphoserine aminotransferase; ... 171 5e-44
CP001281_2871(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 171 1e-43
(B2JF00) RecName: Full=Phosphoserine aminotransferase; ... 169 3e-43
CP000352_715(CP000352|pid:none) Ralstonia metallidurans CH34, co... 167 4e-43
CP000569_694(CP000569|pid:none) Actinobacillus pleuropneumoniae ... 166 5e-43
CP000462_1927(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 168 7e-43
CP001091_744(CP001091|pid:none) Actinobacillus pleuropneumoniae ... 166 7e-43
CP000251_2614(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 172 9e-43
CP000155_4752(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 169 9e-43
DQ780163_1(DQ780163|pid:none) Endoriftia persephone 'Hot96_1+Hot... 169 9e-43
(Q21Y51) RecName: Full=Phosphoserine aminotransferase; ... 162 2e-42
CP000769_1703(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 169 2e-42
AY375563_1(AY375563|pid:none) Neisseria gonorrhoeae 3-phosphoser... 166 2e-42
(Q6F961) RecName: Full=Phosphoserine aminotransferase; ... 164 2e-42
CP001050_1500(CP001050|pid:none) Neisseria gonorrhoeae NCCP11945... 166 3e-42
CP000964_3558(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 167 3e-42
CP000644_1717(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 166 3e-42
CP000089_1228(CP000089|pid:none) Dechloromonas aromatica RCB, co... 165 3e-42
(P57007) RecName: Full=Phosphoserine aminotransferase; ... 163 4e-42
(Q7N6D6) RecName: Full=Phosphoserine aminotransferase; ... 173 5e-42
(Q3SK88) RecName: Full=Phosphoserine aminotransferase; ... 164 6e-42
EU903220_1(EU903220|pid:none) Escherichia coli strain 493/89 3-p... 166 7e-42
(Q8XEA7) RecName: Full=Phosphoserine aminotransferase; ... 166 7e-42
FM178379_2078(FM178379|pid:none) Aliivibrio salmonicida LFI1238 ... 162 7e-42
CP000687_663(CP000687|pid:none) Actinobacillus pleuropneumoniae ... 162 7e-42
CP000270_3433(CP000270|pid:none) Burkholderia xenovorans LB400 c... 164 7e-42
CP000800_956(CP000800|pid:none) Escherichia coli E24377A, comple... 166 1e-41
CP000034_2195(CP000034|pid:none) Shigella dysenteriae Sd197, com... 166 1e-41
CP000266_840(CP000266|pid:none) Shigella flexneri 5 str. 8401, c... 166 1e-41
AF113132_1(AF113132|pid:none) Homo sapiens phosphoserine aminotr... 172 1e-41
CP000381_1472(CP000381|pid:none) Neisseria meningitidis 053442, ... 162 1e-41
AF004823_4(AF004823|pid:none) Neisseria meningitidis opacity pro... 162 1e-41
CP000930_1968(CP000930|pid:none) Heliobacterium modesticaldum Ic... 166 1e-41
CP000036_2032(CP000036|pid:none) Shigella boydii Sb227, complete... 166 1e-41
CP001063_2077(CP001063|pid:none) Shigella boydii CDC 3083-94, co... 166 1e-41
AP006725_1708(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 164 2e-41
(Q10349) RecName: Full=Putative phosphoserine aminotransferase; ... 156 2e-41
CP000713_1398(CP000713|pid:none) Psychrobacter sp. PRwf-1, compl... 163 2e-41
(Q5P7U7) RecName: Full=Phosphoserine aminotransferase; ... 164 2e-41
(Q8FJB7) RecName: Full=Phosphoserine aminotransferase; ... 165 2e-41
(Q6LPD9) RecName: Full=Phosphoserine aminotransferase; ... 161 2e-41
AF004826_4(AF004826|pid:none) Neisseria meningitidis opacity pro... 162 3e-41
CP000880_1912(CP000880|pid:none) Salmonella enterica subsp. ariz... 164 3e-41
CU928158_994(CU928158|pid:none) Escherichia fergusonii ATCC 3546... 163 3e-41
AB170754_1(AB170754|pid:none) Macaca fascicularis brain cDNA clo... 160 3e-41
CU928164_2227(CU928164|pid:none) Escherichia coli IAI39 chromoso... 164 4e-41
(Q0I322) RecName: Full=Phosphoserine aminotransferase; ... 160 4e-41
(A9IJI3) RecName: Full=Phosphoserine aminotransferase; ... 162 6e-41
(P59492) RecName: Full=Phosphoserine aminotransferase; ... 161 6e-41
CP000671_1085(CP000671|pid:none) Haemophilus influenzae PittEE, ... 160 6e-41
CP000749_2828(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 169 7e-41
(P55900) RecName: Full=Phosphoserine aminotransferase; ... 163 8e-41
Y10355_1(Y10355|pid:none) S.typhimurium serC and aroA genes. 163 8e-41
(Q8RLW0) RecName: Full=Phosphoserine aminotransferase; ... 165 1e-40
(P62676) RecName: Full=Phosphoserine aminotransferase; ... 162 1e-40
CP001013_2998(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 169 1e-40
BA000031_1247(BA000031|pid:none) Vibrio parahaemolyticus RIMD 22... 160 1e-40
(Q87QA3) RecName: Full=Phosphoserine aminotransferase; ... 160 1e-40
FM180568_900(FM180568|pid:none) Escherichia coli 0127:H6 E2348/6... 162 1e-40
(Q7VLP0) RecName: Full=Phosphoserine aminotransferase; ... 156 1e-40
AM942759_703(AM942759|pid:none) Proteus mirabilis strain HI4320,... 168 1e-40
CP000010_385(CP000010|pid:none) Burkholderia mallei ATCC 23344 c... 162 2e-40
BX294143_254(BX294143|pid:none) Rhodopirellula baltica SH 1 comp... 162 2e-40
(Q7UQL3) RecName: Full=Phosphoserine aminotransferase; ... 162 2e-40
BX571965_2543(BX571965|pid:none) Burkholderia pseudomallei strai... 162 2e-40
CP000947_939(CP000947|pid:none) Haemophilus somnus 2336, complet... 158 2e-40
CP000826_1700(CP000826|pid:none) Serratia proteamaculans 568, co... 164 2e-40
FM954972_1726(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 156 3e-40
CP001503_847(CP001503|pid:none) Burkholderia glumae BGR1 chromos... 160 3e-40
CP001158_285(CP001158|pid:none) Buchnera aphidicola str. Tuc7 (A... 167 3e-40
CP000514_1006(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 162 4e-40
(Q5E6F2) RecName: Full=Phosphoserine aminotransferase; ... 159 4e-40
CP000094_4072(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 158 5e-40
(Q87BU0) RecName: Full=Phosphoserine aminotransferase; ... 157 5e-40
(Q8ZGB4) RecName: Full=Phosphoserine aminotransferase; ... 166 6e-40
AE017042_1166(AE017042|pid:none) Yersinia pestis biovar Microtus... 166 6e-40
CP000057_1166(CP000057|pid:none) Haemophilus influenzae 86-028NP... 159 7e-40
AP009247_559(AP009247|pid:none) Candidatus Vesicomyosocius okuta... 160 7e-40
AF520224_1(AF520224|pid:none) Neisseria gonorrhoeae 3-phosphoser... 157 9e-40
AY375565_1(AY375565|pid:none) Neisseria gonorrhoeae 3-phosphoser... 157 9e-40
(Q5F7A0) RecName: Full=Phosphoserine aminotransferase; ... 157 9e-40
CP000851_2060(CP000851|pid:none) Shewanella pealeana ATCC 700345... 159 9e-40
CP001101_1502(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 160 9e-40
CP000672_1563(CP000672|pid:none) Haemophilus influenzae PittGG, ... 158 9e-40
(A4JCH1) RecName: Full=Phosphoserine aminotransferase; ... 158 9e-40
(P44336) RecName: Full=Phosphoserine aminotransferase; ... 158 9e-40
CP001132_997(CP001132|pid:none) Acidithiobacillus ferrooxidans A... 160 1e-39
CP000767_1564(CP000767|pid:none) Campylobacter curvus 525.92, co... 156 1e-39
M32213_1(M32213|pid:none) Y.enterocolitica 5-enolpyruvylshikimat... 165 2e-39
AM181176_1605(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 157 2e-39
(A7H543) RecName: Full=Phosphoserine aminotransferase; ... 152 2e-39
(Q7VZG4) RecName: Full=Phosphoserine aminotransferase; ... 157 3e-39
(Q7VR40) RecName: Full=Phosphoserine aminotransferase; ... 151 3e-39
(B1JXR6) RecName: Full=Phosphoserine aminotransferase; ... 157 3e-39
CP000922_2266(CP000922|pid:none) Anoxybacillus flavithermus WK1,... 157 4e-39
(Q8D900) RecName: Full=Phosphoserine aminotransferase; ... 163 5e-39
BA000037_1451(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, ch... 163 5e-39
(Q7W5Z9) RecName: Full=Phosphoserine aminotransferase; ... 156 6e-39
CP000931_2026(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 155 6e-39
(Q66CI9) RecName: Full=Phosphoserine aminotransferase; ... 163 6e-39
(Q2L2T1) RecName: Full=Phosphoserine aminotransferase; ... 156 7e-39
(A9B6Q3) RecName: Full=Phosphoserine aminotransferase; ... 156 7e-39
(Q3BUZ3) RecName: Full=Phosphoserine aminotransferase; ... 154 9e-39
AE003852_1140(AE003852|pid:none) Vibrio cholerae O1 biovar eltor... 153 1e-38
(Q9KSU7) RecName: Full=Phosphoserine aminotransferase; ... 153 1e-38
(B4SP45) RecName: Full=Phosphoserine aminotransferase; ... 157 1e-38
(Q2P354) RecName: Full=Phosphoserine aminotransferase; ... 151 1e-38
CP000926_1350(CP000926|pid:none) Pseudomonas putida GB-1, comple... 155 2e-38
CP000555_2234(CP000555|pid:none) Methylibium petroleiphilum PM1,... 154 2e-38
(B2SJJ1) RecName: Full=Phosphoserine aminotransferase; ... 150 2e-38
CP000539_2370(CP000539|pid:none) Acidovorax sp. JS42, complete g... 155 3e-38
AY659068_1(AY659068|pid:none) Synthetic construct Peudomonas aer... 153 3e-38
(Q9HZ66) RecName: Full=Phosphoserine aminotransferase; ... 153 3e-38
(B0RUW3) RecName: Full=Phosphoserine aminotransferase; ... 151 3e-38
(P80862) RecName: Full=Phosphoserine aminotransferase; ... 154 3e-38
CP000909_967(CP000909|pid:none) Chloroflexus aurantiacus J-10-fl... 152 4e-38
CP000076_4254(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 152 5e-38
CP000438_1858(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 152 5e-38
CP000471_1404(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 160 5e-38
CP000058_3496(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 152 8e-38
(B2FKF0) RecName: Full=Phosphoserine aminotransferase; ... 154 8e-38
(Q1D2L9) RecName: Full=Phosphoserine aminotransferase; ... 149 8e-38
CP000075_3645(CP000075|pid:none) Pseudomonas syringae pv. syring... 152 1e-37
(Q88M07) RecName: Full=Phosphoserine aminotransferase; ... 152 1e-37
CP000915_900(CP000915|pid:none) Francisella tularensis subsp. me... 149 1e-37
CP000776_1221(CP000776|pid:none) Campylobacter hominis ATCC BAA-... 158 2e-37
(Q5L296) RecName: Full=Phosphoserine aminotransferase; ... 151 2e-37
CP000488_573(CP000488|pid:none) Candidatus Ruthia magnifica str.... 150 2e-37
CU928171_630(CU928171|pid:none) Kluyveromyces thermotolerans str... 158 2e-37
(Q65S80) RecName: Full=Phosphoserine aminotransferase; ... 150 2e-37
CP000544_561(CP000544|pid:none) Halorhodospira halophila SL1, co... 155 2e-37
CP000109_1193(CP000109|pid:none) Thiomicrospira crunogena XCL-2,... 155 2e-37
AE017333_999(AE017333|pid:none) Bacillus licheniformis DSM 13, c... 150 3e-37
CP001175_2664(CP001175|pid:none) Listeria monocytogenes HCC23, c... 145 4e-37
(Q8Y3L0) RecName: Full=Phosphoserine aminotransferase; ... 145 4e-37
CP001157_1529(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 149 4e-37
CP000608_796(CP000608|pid:none) Francisella tularensis subsp. tu... 147 4e-37
CP001337_2363(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 148 5e-37
CP000439_932(CP000439|pid:none) Francisella tularensis subsp. no... 147 5e-37
CP000885_3345(CP000885|pid:none) Clostridium phytofermentans ISD... 144 7e-37
AY967140_1(AY967140|pid:none) Synthetic construct isolate FTT056... 146 7e-37
(Q71VT6) RecName: Full=Phosphoserine aminotransferase; ... 145 7e-37
(Q885T5) RecName: Full=Phosphoserine aminotransferase; ... 149 7e-37
CP000746_908(CP000746|pid:none) Actinobacillus succinogenes 130Z... 146 7e-37
AJ749949_560(AJ749949|pid:none) Francisella tularensis subsp. tu... 146 7e-37
(Q5WHT9) RecName: Full=Phosphoserine aminotransferase; ... 149 9e-37
(Q926T3) RecName: Full=Phosphoserine aminotransferase; ... 144 9e-37
CP000803_852(CP000803|pid:none) Francisella tularensis subsp. ho... 147 9e-37
CP000469_1959(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 145 1e-36
(Q12CL3) RecName: Full=Phosphoserine aminotransferase; ... 149 1e-36
(Q8EEH2) RecName: Full=Phosphoserine aminotransferase; ... 145 1e-36
AM263198_2755(AM263198|pid:none) Listeria welshimeri serovar 6b ... 144 1e-36
(Q9KDM4) RecName: Full=Phosphoserine aminotransferase; ... 147 2e-36
AM233362_1017(AM233362|pid:none) Francisella tularensis subsp. h... 145 2e-36
CP000686_2151(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 152 2e-36
CP000606_1943(CP000606|pid:none) Shewanella loihica PV-4, comple... 147 2e-36
AE017354_1392(AE017354|pid:none) Legionella pneumophila subsp. p... 147 5e-36
(Q5ZVM2) RecName: Full=Phosphoserine aminotransferase; ... 147 5e-36
CP000016_371(CP000016|pid:none) Candidatus Blochmannia pennsylva... 153 6e-36
BX294023_1(BX294023|pid:none) Neurospora crassa DNA linkage grou... 142 7e-36
AE010300_367(AE010300|pid:none) Leptospira interrogans serovar l... 149 7e-36
CP001107_1808(CP001107|pid:none) Eubacterium rectale ATCC 33656,... 144 7e-36
(Q72VI2) RecName: Full=Phosphoserine aminotransferase; ... 149 7e-36
CP000961_2285(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 146 7e-36
CP000350_2402(CP000350|pid:none) Leptospira borgpetersenii serov... 149 9e-36
CP000813_932(CP000813|pid:none) Bacillus pumilus SAFR-032, compl... 143 9e-36
CP000903_2903(CP000903|pid:none) Bacillus weihenstephanensis KBA... 152 1e-35
CR380953_411(CR380953|pid:none) Candida glabrata strain CBS138 c... 152 1e-35
(Q6ALW3) RecName: Full=Phosphoserine aminotransferase; ... 147 2e-35
CP001407_3187(CP001407|pid:none) Bacillus cereus 03BB102, comple... 151 2e-35
(A5IBR0) RecName: Full=Phosphoserine aminotransferase; ... 145 2e-35
CP001177_3119(CP001177|pid:none) Bacillus cereus AH187, complete... 151 2e-35
CP000485_2791(CP000485|pid:none) Bacillus thuringiensis str. Al ... 151 2e-35
(Q81BC0) RecName: Full=Phosphoserine aminotransferase; ... 151 2e-35
(Q734W9) RecName: Full=Phosphoserine aminotransferase; ... 150 3e-35
CP001176_3112(CP001176|pid:none) Bacillus cereus B4264, complete... 150 5e-35
CP001283_3209(CP001283|pid:none) Bacillus cereus AH820, complete... 150 5e-35
CP000447_2112(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 142 6e-35
(Q5WWT0) RecName: Full=Phosphoserine aminotransferase; ... 144 6e-35
CP000764_1974(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 149 7e-35
CP000472_2377(CP000472|pid:none) Shewanella piezotolerans WP3, c... 149 7e-35
CP000542_3058(CP000542|pid:none) Verminephrobacter eiseniae EF01... 142 8e-35
CP001087_3491(CP001087|pid:none) Desulfobacterium autotrophicum ... 149 1e-34
AK317676_1(AK317676|pid:none) Arabidopsis thaliana AT4G35630 mRN... 148 2e-34
CP000089_981(CP000089|pid:none) Dechloromonas aromatica RCB, com... 143 5e-34
AB091513_1(AB091513|pid:none) Entamoeba histolytica EhPSAT gene ... 146 8e-34
CP001104_726(CP001104|pid:none) Eubacterium eligens ATCC 27750, ... 134 8e-34
(P33330) RecName: Full=Phosphoserine aminotransferase; ... 145 1e-33
(A2RIS2) RecName: Full=Phosphoserine aminotransferase; ... 145 1e-33
(A5FH28) RecName: Full=Phosphoserine aminotransferase; ... 139 1e-33
CP000503_1925(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 145 2e-33
(A4VU42) RecName: Full=Phosphoserine aminotransferase; ... 136 2e-33
(Q031D5) RecName: Full=Phosphoserine aminotransferase; ... 144 3e-33
AP007157_89(AP007157|pid:none) Aspergillus oryzae RIB40 genomic ... 140 3e-33
CP000753_2251(CP000753|pid:none) Shewanella baltica OS185, compl... 144 4e-33
U19714_1(U19714|pid:none) Saccharomyces cerevisiae 3-phosphoseri... 143 5e-33
CP000681_2054(CP000681|pid:none) Shewanella putrefaciens CN-32, ... 143 7e-33
(Q8E3Y3) RecName: Full=Phosphoserine aminotransferase; ... 136 9e-33
(Q9CHW5) RecName: Full=Phosphoserine aminotransferase; ... 142 1e-32
DQ826155_1(DQ826155|pid:none) Lactobacillus helveticus CNRZ32 ph... 132 1e-32
CP001598_2836(CP001598|pid:none) Bacillus anthracis str. A0248, ... 141 2e-32
AE017225_3045(AE017225|pid:none) Bacillus anthracis str. Sterne,... 141 2e-32
AM946015_436(AM946015|pid:none) Streptococcus uberis 0140J compl... 130 3e-32
(A6L9B7) RecName: Full=Phosphoserine aminotransferase; ... 139 3e-32
(B2GBS2) RecName: Full=Phosphoserine aminotransferase; ... 130 6e-32
(Q8A8L4) RecName: Full=Phosphoserine aminotransferase; ... 136 6e-32
AE017348_325(AE017348|pid:none) Cryptococcus neoformans var. neo... 138 2e-31
(Q8DSV3) RecName: Full=Phosphoserine aminotransferase; ... 128 2e-31
CU928176_625(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 138 2e-31
DQ489736_557(DQ489736|pid:none) Leuconostoc citreum KM20, comple... 133 3e-31
(B0SCE2) RecName: Full=Phosphoserine aminotransferase; ... 137 3e-31
(A3CPJ2) RecName: Full=Phosphoserine aminotransferase; ... 129 4e-31
FJ529691_53(FJ529691|pid:none) Uncultured bacterium URE4 genomic... 129 8e-31
(B6YQL2) RecName: Full=Phosphoserine aminotransferase; ... 131 1e-30
CP001281_2671(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 131 2e-30
AJ276518_3(AJ276518|pid:none) Leuconostoc mesenteroides partial ... 127 4e-30
AM920427_437(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 134 4e-30
(Q5LDN9) RecName: Full=Phosphoserine aminotransferase; ... 129 1e-29
AF037960_1(AF037960|pid:none) Neisseria meningitidis 3-phosphose... 131 2e-29
AF037953_1(AF037953|pid:none) Neisseria meningitidis 3-phosphose... 131 3e-29
AF037955_1(AF037955|pid:none) Neisseria meningitidis 3-phosphose... 131 3e-29
AF037971_1(AF037971|pid:none) Neisseria meningitidis 3-phosphose... 130 3e-29
AF037957_1(AF037957|pid:none) Neisseria meningitidis 3-phosphose... 130 3e-29
CP000124_2615(CP000124|pid:none) Burkholderia pseudomallei 1710b... 125 4e-29
CP000572_2534(CP000572|pid:none) Burkholderia pseudomallei 1106a... 125 4e-29
AF037972_1(AF037972|pid:none) Neisseria meningitidis 3-phosphose... 130 6e-29
CP000010_1398(CP000010|pid:none) Burkholderia mallei ATCC 23344 ... 125 7e-29
BX571965_2238(BX571965|pid:none) Burkholderia pseudomallei strai... 125 7e-29
AF037979_1(AF037979|pid:none) Neisseria meningitidis 3-phosphose... 129 8e-29
AF037977_1(AF037977|pid:none) Neisseria meningitidis 3-phosphose... 129 8e-29
AF037961_1(AF037961|pid:none) Neisseria meningitidis 3-phosphose... 129 1e-28
AF037974_1(AF037974|pid:none) Neisseria meningitidis 3-phosphose... 129 1e-28
AF037970_1(AF037970|pid:none) Neisseria meningitidis 3-phosphose... 128 2e-28
(Q5M3A4) RecName: Full=Phosphoserine aminotransferase; ... 117 8e-28
AF037978_1(AF037978|pid:none) Neisseria meningitidis 3-phosphose... 125 2e-27
CP000304_2026(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 121 3e-26
CP001330_46(CP001330|pid:none) Micromonas sp. RCC299 chromosome ... 114 7e-26
CP001615_619(CP001615|pid:none) Exiguobacterium sp. AT1b, comple... 112 2e-25
AF503924_1(AF503924|pid:none) Alicyclobacillus acidocaldarius ph... 91 4e-17
AY861130_1(AY861130|pid:none) Neisseria gonorrhoeae strain SerC1... 76 1e-12
AY861131_1(AY861131|pid:none) Neisseria gonorrhoeae strain SerC1... 76 1e-12
AY861126_1(AY861126|pid:none) Neisseria gonorrhoeae strain SerC1... 76 1e-12
EF014715_1(EF014715|pid:none) Neisseria gonorrhoeae 3-phosphoser... 74 6e-12
(A1TF55) RecName: Full=Putative phosphoserine aminotransferase; ... 55 3e-06
EF469602_19(EF469602|pid:none) Delftia tsuruhatensis conserved h... 54 4e-06
(A1ULN4) RecName: Full=Putative phosphoserine aminotransferase; ... 54 7e-06
EU523380_2(EU523380|pid:none) Candidatus Liberibacter asiaticus ... 53 1e-05
CP000656_1703(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 52 3e-05
CP000325_221(CP000325|pid:none) Mycobacterium ulcerans Agy99, co... 52 3e-05
AY596504_1(AY596504|pid:none) Helicosporidium sp. ex Simulium jo... 51 4e-05
CP001055_698(CP001055|pid:none) Elusimicrobium minutum Pei191, c... 51 4e-05
CU458896_917(CU458896|pid:none) Mycobacterium abscessus chromoso... 51 4e-05
(A0QBI3) RecName: Full=Putative phosphoserine aminotransferase; ... 51 4e-05
(Q742L2) RecName: Full=Putative phosphoserine aminotransferase; ... 50 6e-05
CP000480_5494(CP000480|pid:none) Mycobacterium smegmatis str. MC... 50 8e-05
(O33062) RecName: Full=Putative phosphoserine aminotransferase; ... 49 2e-04
CR931997_425(CR931997|pid:none) Corynebacterium jeikeium K411 co... 47 5e-04
BA000030_3890(BA000030|pid:none) Streptomyces avermitilis MA-468... 47 8e-04
CT573213_107(CT573213|pid:none) Frankia alni str. ACN14A chromos... 45 0.002
AP009493_3109(AP009493|pid:none) Streptomyces griseus subsp. gri... 45 0.002
EU016562_13(EU016562|pid:none) Uncultured marine microorganism H... 44 0.004
CP000249_81(CP000249|pid:none) Frankia sp. CcI3, complete genome. 44 0.004
BX248356_63(BX248356|pid:none) Corynebacterium diphtheriae gravi... 44 0.005
(A1SEM0) RecName: Full=Phosphoserine aminotransferase; ... 44 0.007
AX236992_1(AX236992|pid:none) Sequence 7 from Patent WO0164899. 43 0.009
(A4QCG9) RecName: Full=Phosphoserine aminotransferase; ... 43 0.009
AP006618_661(AP006618|pid:none) Nocardia farcinica IFM 10152 DNA... 42 0.016
BA000035_901(BA000035|pid:none) Corynebacterium efficiens YS-314... 42 0.016
CP000820_7078(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 42 0.027
CP000474_972(CP000474|pid:none) Arthrobacter aurescens TC1, comp... 42 0.027
CP000781_1193(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 41 0.036
CP000248_2666(CP000248|pid:none) Novosphingobium aromaticivorans... 41 0.036
AP009152_1827(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, ... 40 0.061
AM711867_2496(AM711867|pid:none) Clavibacter michiganensis subsp... 39 0.18
AP009179_172(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic D... 39 0.18
CP000850_503(CP000850|pid:none) Salinispora arenicola CNS-205, c... 39 0.23
CP001601_764(CP001601|pid:none) Corynebacterium aurimucosum ATCC... 39 0.23
(Q8PT12) RecName: Full=Phosphoserine aminotransferase; ... 39 0.23
CP000442_916(CP000442|pid:none) Burkholderia ambifaria AMMD chro... 38 0.30
CP001025_1115(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 38 0.39
CP000910_486(CP000910|pid:none) Renibacterium salmoninarum ATCC ... 38 0.39
CP000481_114(CP000481|pid:none) Acidothermus cellulolyticus 11B ... 37 0.51
CP000750_3562(CP000750|pid:none) Kineococcus radiotolerans SRS30... 37 0.67
(Q1RHT6) RecName: Full=Putative ankyrin repeat protein RBE_0997;... 37 0.67
AM236080_3964(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 37 0.88
AE014188_276(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 36 1.1
AL844506_233(AL844506|pid:none) Plasmodium falciparum 3D7 chromo... 36 1.1
CP000489_808(CP000489|pid:none) Paracoccus denitrificans PD1222 ... 36 1.1
T12644(T12644) NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) cha... 36 1.5
(P33275) RecName: Full=Uncharacterized protein MYCGA3080; 35 2.0
AE014187_202(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 35 2.0
CP000828_2077(CP000828|pid:none) Acaryochloris marina MBIC11017,... 35 2.0
CP001341_902(CP001341|pid:none) Arthrobacter chlorophenolicus A6... 35 2.5
CP000859_1175(CP000859|pid:none) Desulfococcus oleovorans Hxd3, ... 35 2.5
CP001080_169(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1... 35 2.5
CP000031_3277(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple... 35 3.3
AE014185_35(AE014185|pid:none) Plasmodium falciparum 3D7 chromos... 35 3.3
CR382128_14(CR382128|pid:none) Yarrowia lipolytica strain CLIB12... 35 3.3
AF251451_1(AF251451|pid:none) Brachypodium distachyon NADH dehyd... 34 4.3
CP001029_620(CP001029|pid:none) Methylobacterium populi BJ001, c... 34 4.3
AM420293_620(AM420293|pid:none) Saccharopolyspora erythraea NRRL... 34 4.3
CP000133_3407(CP000133|pid:none) Rhizobium etli CFN 42, complete... 34 4.3
CP001618_875(CP001618|pid:none) Beutenbergia cavernae DSM 12333,... 34 4.3
CR940347_420(CR940347|pid:none) Theileria annulata strain Ankara... 34 5.7
AE016795_979(AE016795|pid:none) Vibrio vulnificus CMCP6 chromoso... 34 5.7
BX548174_35(BX548174|pid:none) Prochlorococcus marinus MED4 comp... 34 5.7
CP001074_3644(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 33 7.4
CP000667_422(CP000667|pid:none) Salinispora tropica CNB-440, com... 33 7.4
AM260479_1812(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 33 7.4
CP000661_9(CP000661|pid:none) Rhodobacter sphaeroides ATCC 17025... 33 7.4
AY570715_1(AY570715|pid:none) Ostreococcus tauri SSIIIb (ss3b) g... 33 7.4
(P32452) RecName: Full=Putative prephenate dehydratase; ... 33 9.7
CP000721_1588(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 33 9.7
FM992691_342(FM992691|pid:none) Candida dubliniensis CD36 chromo... 33 9.7
CP000628_2769(CP000628|pid:none) Agrobacterium radiobacter K84 c... 33 9.7
AY150295_2(AY150295|pid:none) Enterococcus faecium strain E0013 ... 33 9.7
CP000111_35(CP000111|pid:none) Prochlorococcus marinus str. MIT ... 33 9.7
T12649(T12649) NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) cha... 33 9.7

>(P91856) RecName: Full=Probable phosphoserine aminotransferase;
Short=PSAT; EC=2.6.1.52; AltName:
Full=Phosphohydroxythreonine aminotransferase;
&T21441(T21441) &Z81516_6(Z81516|pid:none)
Length = 370

Score = 207 bits (526), Expect(2) = 3e-56
Identities = 101/208 (48%), Positives = 141/208 (67%), Gaps = 2/208 (0%)
Frame = +3

Query: 9 FLTVTEPQSWKFSPDAKYVHYCDNETIHGIEMPISTPDHLPSNLIKVCDMSSNFLSKPID 188
++TV + ++W A Y++YC NET+HGIE + P+ N+ V D+SSNF+++P D
Sbjct: 129 YVTVPDQENWVHDEKAAYLYYCANETVHGIEFTPTAPES--HNVPLVADVSSNFMARPFD 186

Query: 189 VNKFDLIFAGAQKNAGISGITIVIIKKSLLLKTKPNVPSVFNFLKKSQNNSLDNTPPTFN 368
++F GAQKN G +G+TIVI++K L+ K + PSVF++ + NNSL NTPPT
Sbjct: 187 FKDHGVVFGGAQKNLGAAGLTIVIVRKDLIGKQQAITPSVFSYKEMIANNSLYNTPPTGG 246

Query: 369 IYITGLILKWIINKGGLSEIEKLNIAKAHALYEYIDNSNSFYKCSIDKNYRSRMNVVFRI 548
IY T L+LKWI +KGGL I +LN+ K+ +Y+ IDNSN FY C++DK YRS MNV FRI
Sbjct: 247 IYTTNLVLKWIKSKGGLQAIYELNLQKSGMIYDIIDNSNGFYHCAVDKRYRSIMNVCFRI 306

Query: 549 --QDGNTELEEKFIKEASKENITDIKGH 626
GN ELEEKF+K + + N+ +KGH
Sbjct: 307 GGPSGNDELEEKFLKGSIERNMISLKGH 334

Score = 35.4 bits (80), Expect(2) = 3e-56
Identities = 15/33 (45%), Positives = 25/33 (75%)
Frame = +1

Query: 616 LKVIATVGGLRVSLYNAITIDQTLILINFXHKF 714
LK +VGG+R SLYNAI++++T +L + ++F
Sbjct: 331 LKGHRSVGGIRASLYNAISVEETQVLATWMNEF 363

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 960,224,192
Number of extensions: 17099205
Number of successful extensions: 49402
Number of sequences better than 10.0: 357
Number of HSP's gapped: 48803
Number of HSP's successfully gapped: 585
Length of query: 254
Length of database: 1,040,966,779
Length adjustment: 126
Effective length of query: 128
Effective length of database: 637,226,869
Effective search space: 81565039232
Effective search space used: 81565039232
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

PSORT

psg: 0.75 gvh: 0.31 alm: 0.34 top: 0.53 tms: 0.00 mit: 0.17 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

52.0 %: cytoplasmic
24.0 %: nuclear
16.0 %: cytoskeletal
4.0 %: mitochondrial
4.0 %: vacuolar

>> prediction for Contig-U10359-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 4
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0