Contig-U01650-1
Contig ID Contig-U01650-1
Contig update 2001. 8.29
Contig sequence
>Contig-U01650-1 (Contig-U01650-1Q) /CSM_Contig/Contig-U01650-1Q.Seq.d
CAATATAAAGTATATCAATATTAATTTTAATTTTATAAATAAAGAAACAA
TTTCTATAAGAAAAAAATAAAAAAATAATAAAATAATAAAAAAATAAAAA
ATAATAAAAAAATATAAAAATAATAAAATAAATAATTAAAATAAATAAAT
AAATAAAATAAATAAATAAAATAAATAAATAAAATAAAATAAATAATTTT
TATGGATTGGATAAAAAGTTATTTTAATTATTATTTTAAAAGAGAAGTTG
TAGTTAAAAATAGTAACGGAGATAGTAGTAAAATTGAAGATTATGTTGTA
GATCAATTTACGATATTAAATAATAATGTTGAAGATGGTAATAATAATAA
TATTTTAAATTCAAATGATGATGGTGGTGGTATAAAAATAATCGTTTCAT
----------CCANATTTCCATGGCGACGATAGCNCATCCAGTGGTGGAT
ATCCATTCGTTCCACNGCTGGAATTCCAGGTTTATTCCATCTCTATGGNA
ATGATAAATACATCTATTACGATGGCGGATTCCAATACAATTGTAATTTN
CCAATTGCATTAATTGAAGCATCTTCACTATATCCCAAATGCTTCAAAAT
TATTATTCATTTCAATTGGAACTGGTTATGGTAAAAATGATTCACCCAAT
TATTATTGTTCAAATGATTCAACTGATGATAGGGTTGAAGAGTATTTAAA
ACAATTTCAAGATCAATCATCAATTGGTGGAATTAAATTAAAATCATCTC
AACAAGCTTCTCCAACAAAACTTGGTGGAATCTATGATTTAATTAAAAAT
TTATATAATCTTTATAGAAATTATGTCAATATGACAGATACTTATGTAGT
TTTACAACAATTTTTAAAAGATCATCAATTGGATGACCATATATTCACCT
ATCGTTTTGATGTACAATTAGAATATGATATTAGTCTACGTGATAGTTCA
TTACAAGCTGAACAAGAAATGCAAAGATCAGTTTATGATTATGTAAATTC
AAATACTAGTTTTAAGAGATCTGTTTCAAATATTAAAAAATTAATTGAAT
TAAATAATAATAATAATAATAAACAATTGTAAAAATAAAAATATAAAAAT
AAAAATAAAAAAAAAACATTGTATACTTTTTAGAAT

Gap gap included
Contig length 1126
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 860157
End point 861285
Strand (PLUS/MINUS) PLUS
Number of clones 3
Number of EST 4
Link to clone list U01650
List of clone(s)

est1=SSD816F,1,401
est2=SSD817F,1,401
est3=SSC466Z,402,1093
est4=SSD816Z,578,1128
Translated Amino Acid sequence
qykvyqy*f*fyk*rnnfykkkikk**nnkkiknnkki*k**nk*lk*ink*nk*ik*in
kik*IIFMDWIKSYFNYYFKREVVVKNSNGDSSKIEDYVVDQFTILNNNVEDGNNNNILN
SNDDGGGIKIIVS---

---PXFHGDDSXSSGGYPFVPXLEFQVYSISMXMINTSITMADSNTIVIXQLH*lkhlhy
ipnaskllfisigtgygkndspnyycsndstddrveeylkqfqdqssiggiklkssqqas
ptklggiydliknlynlyrnyvnmtdtyvvlqqflkdhqlddhiftyrfdvqleydislr
dsslqaeqemqrsvydyvnsntsfkrsvsnikklielnnnnnnkql*k*kyknknkkktl
ytf*n


Translated Amino Acid sequence (All Frames)
Frame A:
qykvyqy*f*fyk*rnnfykkkikk**nnkkiknnkki*k**nk*lk*ink*nk*ik*in
kik*IIFMDWIKSYFNYYFKREVVVKNSNGDSSKIEDYVVDQFTILNNNVEDGNNNNILN
SNDDGGGIKIIVS---

---PXFHGDDSXSSGGYPFVPXLEFQVYSISMXMINTSITMADSNTIVIXQLH*lkhlhy
ipnaskllfisigtgygkndspnyycsndstddrveeylkqfqdqssiggiklkssqqas
ptklggiydliknlynlyrnyvnmtdtyvvlqqflkdhqlddhiftyrfdvqleydislr
dsslqaeqemqrsvydyvnsntsfkrsvsnikklielnnnnnnkql*k*kyknknkkktl
ytf*n

Frame B:
nikyininfnfinketisirkk*knnkiikk*kiikkyknnkinn*nk*inkink*nk*i
k*nk*flwig*kviliiilkekl*lkivteivvklkiml*inlry*iimlkmviiiif*i
qmmmvvv*k*sfh---

---xismatiahpvvdihsfhxwnsrfipslwx**ihllrwripiql*fxncin*sifti
sqmlqnyysfqlelvmvkmihpiiivqmiqlmiglksi*nnfkinhqlveln*nhlnkll
qqnlvesmi*lkiyiifieimsi*qilm*fynnf*kiinwmtiyspivlmyn*nmilvyv
ivhyklnkkckdqfmim*iqilvlrdlfqilkn*ln*iiiiiinncknknikikikkkhc
ilfr

Frame C:
i*sisililil*ikkqfl*eknkkiik**knkk**knikiik*iikink*ik*inkink*
nkinnfygldkklf*llf*krscs*k**rr***n*rlccrsiydik**c*rw****yfkf
k**wwwyknnrf---

---xfpwrr*xiqwwisirstagipglfhlygndkyiyydggfqyncnxpialieassly
pkcfkiiihfnwnwlw*k*ftqlllfk*fn***g*rvfktisrsiinwwn*ikiistsfs
nktwwnl*fn*kfi*sl*klcqydrylcsfttifkrssig*pyihlsf*ctiri*y*st*
*fits*trnakisl*lckfky*f*eicfky*kin*ik******tivkiki*k*k*kkniv
yfle

own update 2004. 6. 7
Homology vs CSM-cDNA
Query= Contig-U01650-1 (Contig-U01650-1Q)
/CSM_Contig/Contig-U01650-1Q.Seq.d
(1136 letters)

Database: CSM
8361 sequences; 7,895,291 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U01650-1 (Contig-U01650-1Q) /CSM_Contig/Conti... 1554 0.0
Contig-U11600-1 (Contig-U11600-1Q) /CSM_Contig/Conti... 44 5e-04
Contig-U01996-1 (Contig-U01996-1Q) /CSM_Contig/Conti... 44 5e-04
Contig-U12148-1 (Contig-U12148-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U12113-1 (Contig-U12113-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U11801-1 (Contig-U11801-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U11710-1 (Contig-U11710-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U02704-1 (Contig-U02704-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U00906-1 (Contig-U00906-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U14263-1 (Contig-U14263-1Q) /CSM_Contig/Conti... 40 0.007

>Contig-U01650-1 (Contig-U01650-1Q) /CSM_Contig/Contig-U01650-1Q.Seq.d
Length = 1136

Score = 1554 bits (784), Expect = 0.0
Identities = 829/829 (100%)
Strand = Plus / Plus


Query: 198 ttttatggattggataaaaagttattttaattattattttaaaagagaagttgtagttaa 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ttttatggattggataaaaagttattttaattattattttaaaagagaagttgtagttaa 257


Query: 258 aaatagtaacggagatagtagtaaaattgaagattatgttgtagatcaatttacgatatt 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aaatagtaacggagatagtagtaaaattgaagattatgttgtagatcaatttacgatatt 317


Query: 318 aaataataatgttgaagatggtaataataataatattttaaattcaaatgatgatggtgg 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aaataataatgttgaagatggtaataataataatattttaaattcaaatgatgatggtgg 377


Query: 378 tggtataaaaataatcgtttcatnnnnnnnnnnccanatttccatggcgacgatagcnca 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tggtataaaaataatcgtttcatnnnnnnnnnnccanatttccatggcgacgatagcnca 437


Query: 438 tccagtggtggatatccattcgttccacngctggaattccaggtttattccatctctatg 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tccagtggtggatatccattcgttccacngctggaattccaggtttattccatctctatg 497


Query: 498 gnaatgataaatacatctattacgatggcggattccaatacaattgtaatttnccaattg 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gnaatgataaatacatctattacgatggcggattccaatacaattgtaatttnccaattg 557


Query: 558 cattaattgaagcatcttcactatatcccaaatgcttcaaaattattattcatttcaatt 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 cattaattgaagcatcttcactatatcccaaatgcttcaaaattattattcatttcaatt 617


Query: 618 ggaactggttatggtaaaaatgattcacccaattattattgttcaaatgattcaactgat 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ggaactggttatggtaaaaatgattcacccaattattattgttcaaatgattcaactgat 677


Query: 678 gatagggttgaagagtatttaaaacaatttcaagatcaatcatcaattggtggaattaaa 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gatagggttgaagagtatttaaaacaatttcaagatcaatcatcaattggtggaattaaa 737


Query: 738 ttaaaatcatctcaacaagcttctccaacaaaacttggtggaatctatgatttaattaaa 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ttaaaatcatctcaacaagcttctccaacaaaacttggtggaatctatgatttaattaaa 797


Query: 798 aatttatataatctttatagaaattatgtcaatatgacagatacttatgtagttttacaa 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 aatttatataatctttatagaaattatgtcaatatgacagatacttatgtagttttacaa 857


Query: 858 caatttttaaaagatcatcaattggatgaccatatattcacctatcgttttgatgtacaa 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 caatttttaaaagatcatcaattggatgaccatatattcacctatcgttttgatgtacaa 917


Query: 918 ttagaatatgatattagtctacgtgatagttcattacaagctgaacaagaaatgcaaaga 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 ttagaatatgatattagtctacgtgatagttcattacaagctgaacaagaaatgcaaaga 977


Query: 978 tcagtttatgattatgtaaattcaaatactagttttaagagatctgttt 1026
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 978 tcagtttatgattatgtaaattcaaatactagttttaagagatctgttt 1026


Score = 119 bits (60), Expect = 1e-26
Identities = 60/60 (100%)
Strand = Plus / Plus


Query: 1 caatataaagtatatcaatattaattttaattttataaataaagaaacaatttctataag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caatataaagtatatcaatattaattttaattttataaataaagaaacaatttctataag 60


Score = 40.1 bits (20), Expect = 0.007
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 1117 cattgtatactttttagaat 1136
||||||||||||||||||||
Sbjct: 1117 cattgtatactttttagaat 1136


>Contig-U11600-1 (Contig-U11600-1Q) /CSM_Contig/Contig-U11600-1Q.Seq.d
Length = 3141

Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus


Query: 212 taaaaagttattttaattattatttt 237
|||||| |||||||||||||||||||
Sbjct: 3008 taaaaaattattttaattattatttt 3033


>Contig-U01996-1 (Contig-U01996-1Q) /CSM_Contig/Contig-U01996-1Q.Seq.d
Length = 909

Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 339 taataataataatattttaaat 360
||||||||||||||||||||||
Sbjct: 391 taataataataatattttaaat 412


Database: CSM
Posted date: Jun 7, 2004 8:33 AM
Number of letters in database: 7,895,291
Number of sequences in database: 8361

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 53,348
Number of Sequences: 8361
Number of extensions: 53348
Number of successful extensions: 16482
Number of sequences better than 10.0: 1411
length of query: 1136
length of database: 7,895,291
effective HSP length: 16
effective length of query: 1120
effective length of database: 7,761,515
effective search space: 8692896800
effective search space used: 8692896800
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 5. 3
Homology vs DNA
Query= Contig-U01650-1 (Contig-U01650-1Q) /CSM_Contig/Contig-U01650-1Q.Seq.d
(1136 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(C84191) Dictyostelium discoideum slug cDNA, clone SSC466. 1168 0.0 1
(AU037583) Dictyostelium discoideum slug cDNA, clone SSD816. 874 0.0 2
(AU072242) Dictyostelium discoideum slug cDNA, clone SSD817. 119 2e-22 1
(AU072241) Dictyostelium discoideum slug cDNA, clone SSD816. 119 2e-22 1
(AC152705) Bos taurus clone CH240-5F3, WORKING DRAFT SEQUENC... 44 6e-04 7
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 42 8e-04 9
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 40 8e-04 7
(AM429076) Vitis vinifera contig VV78X039912.12, whole genom... 38 0.003 6
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 36 0.004 8
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2... 34 0.005 13
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 38 0.006 8
(AL844507) Plasmodium falciparum chromosome 8. 38 0.006 8
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 40 0.007 5
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 36 0.007 17
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 42 0.008 10
(GE666110) CBUC3535.g1 B.anynana_abdomen_nosize Bicyclus any... 30 0.010 5
(ER532052) 1093015775866 Global-Ocean-Sampling_GS-35-01-01-1... 38 0.011 3
(AE014823) Plasmodium falciparum 3D7 chromosome 14 section 8... 40 0.012 10
(AL928976) Zebrafish DNA sequence from clone CH211-134B16 in... 54 0.012 1
(ED213068) AUAC-aat23f06.g1 Ascaris suum whole genome shotgu... 54 0.012 1
(ED149410) AUAC-aac31b06.b1 Ascaris suum whole genome shotgu... 54 0.012 1
(AE014818) Plasmodium falciparum 3D7 chromosome 14 section 3... 38 0.013 10
(AM285307) Spiroplasma citri GII3-3X chromosome, contig Cont... 40 0.016 8
(BX571857) Staphylococcus aureus strain MSSA476, complete ge... 36 0.016 20
(BA000033) Staphylococcus aureus subsp. aureus MW2 DNA, comp... 36 0.018 20
(AF250284) Amsacta moorei entomopoxvirus, complete genome. 36 0.022 11
(AM433265) Vitis vinifera contig VV78X029554.8, whole genome... 42 0.025 3
(BX276087) Zebrafish DNA sequence from clone CH211-270M20 in... 36 0.031 2
(AL034556) Plasmodium falciparum MAL3P5. 42 0.038 8
(EY446291) CBAY8449.rev CBAY Tubifex tubifex Embryos and juv... 40 0.039 2
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117... 36 0.046 7
(BX247871) Zebrafish DNA sequence from clone CH211-190P8. 52 0.048 1
(CU672269) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 52 0.048 1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 42 0.055 6
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 40 0.070 6
(AC116967) Dictyostelium discoideum chromosome 2 map 5481549... 38 0.081 6
(DX526572) GH_MBb0080I06f GH_MBb Gossypium hirsutum genomic ... 42 0.086 2
(AL929354) Plasmodium falciparum strain 3D7, chromosome 5, s... 34 0.093 10
(AC115607) Dictyostelium discoideum chromosome 2 map 4559693... 36 0.099 7
(AE014842) Plasmodium falciparum 3D7 chromosome 11 section 7... 34 0.11 10
(AE014833) Plasmodium falciparum 3D7 chromosome 10 section 5... 30 0.11 12
(AL929358) Plasmodium falciparum strain 3D7, chromosome 9; s... 36 0.11 10
(AL929359) Plasmodium falciparum strain 3D7, chromosome 9; s... 36 0.11 2
(AC098548) Rattus norvegicus clone CH230-104F8, *** SEQUENCI... 38 0.11 2
(AC152100) Bos taurus clone CH240-1A14, WORKING DRAFT SEQUEN... 38 0.11 2
(AC168093) Bos taurus clone CH240-234F5, WORKING DRAFT SEQUE... 38 0.11 2
(Z98547) Plasmodium falciparum MAL3P3. 40 0.12 2
(EY356949) CAWZ4637.fwd CAWZ Helobdella robusta Primary Late... 36 0.12 3
(CU466263) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 40 0.12 2
(AM482205) Vitis vinifera contig VV78X125981.28, whole genom... 36 0.12 2
(EY359248) CAWZ6281.fwd CAWZ Helobdella robusta Primary Late... 36 0.13 3
(DQ866050) Simosyrphus grandicornis mitochondrion, complete ... 34 0.13 6
(EG961992) AU_Ich_016D_E01 Whole organism normalized cDNA li... 44 0.14 2
(GD166626) OXBB-aaa02f09.g1 Oxytricha_pSMART_OXBB Sterkiella... 40 0.15 2
(BQ595890) PfESToab26d06.y1 Plasmodium falciparum 3D7 asexua... 36 0.15 2
(CW145280) 104_537_11138384_148_34971_020 Sorghum methylatio... 42 0.15 2
(CW145279) 104_537_11138384_116_34975_020 Sorghum methylatio... 42 0.15 2
(BX276115) Zebrafish DNA sequence from clone DKEY-274M17 in ... 36 0.18 8
(CL113045) ISB1-57P17_Sp6.1 ISB1 Xenopus (Silurana) tropical... 32 0.18 4
(CU571403) Zebrafish DNA sequence from clone DKEY-96J1 in li... 50 0.19 1
(BX890608) Zebrafish DNA sequence from clone CH211-195J11 in... 50 0.19 1
(AC111861) Rattus norvegicus clone CH230-206A8, WORKING DRAF... 50 0.19 1
(CU855695) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.19 1
(AG756164) Macaca fuscata fuscata DNA, clone: MSB2-223C10_R,... 40 0.19 2
(CR548612) Paramecium tetraurelia macronuclear largest chrom... 32 0.19 18
(EY310261) CAWX22052.rev CAWX Helobdella robusta Primary Ear... 40 0.20 2
(EK160984) 1095458030587 Global-Ocean-Sampling_GS-31-01-01-1... 40 0.22 2
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 34 0.22 12
(CP000770) Candidatus Sulcia muelleri GWSS, complete genome. 36 0.24 12
(AM487379) Vitis vinifera contig VV78X237931.5, whole genome... 40 0.24 5
(AP006391) Lotus japonicus genomic DNA, chromosome 4, clone:... 32 0.26 7
(AL929356) Plasmodium falciparum strain 3D7, chromosome 9; s... 38 0.26 7
(BA000018) Staphylococcus aureus subsp. aureus N315 DNA, com... 36 0.28 20
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 34 0.28 6
(AE014840) Plasmodium falciparum 3D7 chromosome 11 section 5... 38 0.30 11
(FP236473) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 0.36 6
(FJ429370) Carica papaya clone 75H06, complete sequence. 40 0.36 7
(GD182938) Ferret_009_O15 Ferret library from spleen, liver,... 30 0.36 4
(AP009324) Staphylococcus aureus subsp. aureus Mu3 DNA, comp... 36 0.37 20
(FC817030) Sr_pAMT7_07m06_T7 S. ratti mixed stage pAMP Stron... 36 0.40 3
(AE014825) Plasmodium falciparum 3D7 chromosome 14 section 1... 36 0.40 8
(AC163354) Mus musculus BAC clone RP23-49E21 from chromosome... 36 0.41 2
(AC128112) Rattus norvegicus clone CH230-67G13, *** SEQUENCI... 34 0.41 2
(BX470214) Zebrafish DNA sequence from clone DKEY-27M7 in li... 34 0.41 2
(AC129866) Rattus norvegicus clone CH230-13P21, *** SEQUENCI... 36 0.41 2
(DQ832717) Phytophthora sojae mitochondrion, complete genome. 34 0.41 7
(CP000736) Staphylococcus aureus subsp. aureus JH1, complete... 36 0.41 20
(CP000703) Staphylococcus aureus subsp. aureus JH9, complete... 36 0.41 20
(AL713960) Mouse DNA sequence from clone RP23-448I9 on chrom... 34 0.41 2
(CK310777) SB02007A1B07.f1 normalized Keck-Tagu Library SB02... 36 0.41 3
(AC119511) Rattus norvegicus clone CH230-391D17, WORKING DRA... 34 0.42 2
(AC159637) Mus musculus chromosome 12 clone RP24-81I4, WORKI... 38 0.42 2
(CU633493) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 0.42 7
(AC154778) Mus musculus BAC clone RP24-459I17 from chromosom... 38 0.42 2
(AC149213) Medicago truncatula clone mth2-105p11, complete s... 34 0.43 2
(AE017308) Mycoplasma mobile 163K complete genome. 38 0.44 16
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 36 0.44 7
(AM441566) Vitis vinifera contig VV78X129319.10, whole genom... 34 0.46 2
(AM445767) Vitis vinifera contig VV78X190098.9, whole genome... 34 0.47 2
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 38 0.49 7
(EU817815) Loxosceles sp. 2 GJB-2008 16S ribosomal RNA gene,... 36 0.50 3
(FM992689) Candida dubliniensis CD36 chromosome 2, complete ... 42 0.50 11
(AM488644) Vitis vinifera contig VV78X040320.7, whole genome... 34 0.51 2
(CU858269) A BAC library has been constructed from PN40024 g... 40 0.53 2
(DW630656) CLJ357-G05.x1d-t SHGC-CLJ2 Gasterosteus aculeatus... 38 0.54 2
(CG921366) MBEKV14TR mth2 Medicago truncatula genomic clone ... 34 0.54 2
(FH527299) CHO_OF4798xd09f1.ab1 CHO_OF4 Nicotiana tabacum ge... 34 0.54 2
(FH692570) CHO_OF5115xd18f1.ab1 CHO_OF5 Nicotiana tabacum ge... 34 0.54 2
(FH966928) CHO_OF6755xj09r1.ab1 CHO_OF6 Nicotiana tabacum ge... 34 0.54 2
(CT550921) A BAC library has been constructed from cultivar ... 34 0.54 2
(EY337817) CAWY8582.fwd CAWY Helobdella robusta Subtracted E... 34 0.54 2
(FI108676) 41-L103215-1033-001-B11-CCrv IGS-SCF-1033 Bvu-KWS... 36 0.54 2
(DC871508) Samia cynthia ricini cDNA, clone: I10A02NGRL0008_... 44 0.54 2
(ET953738) CHO_OF092xh18r1.ab1 CHO_OF Nicotiana tabacum geno... 38 0.55 2
(CU781311) A BAC library has been constructed from PN40024 g... 34 0.55 2
(CR809115) GR0AAA32AE03RM1 INRA BAC Bos taurus genomic clone... 34 0.55 2
(AC215900) Populus trichocarpa clone POP064-E05, complete se... 32 0.55 7
(EB568334) AGENCOURT_51185921 D. virilis EST Drosophila viri... 46 0.66 2
(EB569685) AGENCOURT_51193837 D. virilis EST Drosophila viri... 46 0.67 2
(EB561429) AGENCOURT_50408356 D. virilis EST Drosophila viri... 46 0.67 2
(EB554915) AGENCOURT_51803670 D. virilis EST Drosophila viri... 46 0.68 2
(EB557607) AGENCOURT_51103690 D. virilis EST Drosophila viri... 46 0.68 2
(EB560602) AGENCOURT_51880747 D. virilis EST Drosophila viri... 46 0.70 2
(AL354857) Human DNA sequence from clone RP11-346N8 on chrom... 40 0.70 4
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 36 0.71 6
(EB565297) AGENCOURT_51102569 D. virilis EST Drosophila viri... 46 0.73 2
(AE014820) Plasmodium falciparum 3D7 chromosome 14 section 5... 38 0.74 6
(EJ113145) 1092343164053 Global-Ocean-Sampling_GS-27-01-01-1... 42 0.74 2
(AE015927) Clostridium tetani E88, complete genome. 42 0.75 16
(BV410394) S229P683RB9.T0 GermanShepherd Canis familiaris ST... 48 0.75 1
(AC134245) Mus musculus BAC clone RP23-144I22 from chromosom... 48 0.75 1
(AC116679) Mus musculus chromosome 12, clone RP23-391I19, co... 48 0.75 1
(AC110382) Mus musculus BAC clone RP24-555I16 from chromosom... 48 0.75 1
(AY615282) Solanum tuberosum PEN2-like protein gene, partial... 48 0.75 1
(CS452614) Sequence 14 from Patent WO2006119494. 48 0.75 1
(BD453009) Diagnosis of Diseases Associated with tumor suppr... 48 0.75 1
(AX251488) Sequence 456 from Patent WO0168912. 48 0.75 1
(GC698468) Sequence 13713 from patent US 6812339. 48 0.75 1
(EU494497) Drosophila ambochila voucher 109433.1 16S ribosom... 48 0.75 1
(AE014822) Plasmodium falciparum 3D7 chromosome 14 section 7... 48 0.75 1
(AC113370) Homo sapiens chromosome 5 clone RP11-124O5, compl... 48 0.75 1
(AC093294) Homo sapiens chromosome 5 clone RP11-524C16, comp... 48 0.75 1
(AC013549) Homo sapiens chromosome 11, clone RP11-47J17, com... 48 0.75 1
(AC132960) Rattus norvegicus clone CH230-162J3, *** SEQUENCI... 48 0.75 1
(AC114046) Rattus norvegicus clone CH230-187J8, WORKING DRAF... 48 0.75 1
(AP007395) Lotus japonicus genomic DNA, chromosome 4, clone:... 48 0.75 1
(AC224106) Bos taurus clone CH240-450D10, WORKING DRAFT SEQU... 48 0.75 1
(AC224003) Bos taurus clone CH240-452C9, WORKING DRAFT SEQUE... 48 0.75 1
(AC181910) Strongylocentrotus purpuratus clone R3-1012L16, W... 48 0.75 1
(AC181657) Strongylocentrotus purpuratus clone R3-3040P7, WO... 48 0.75 1
(AC179869) Strongylocentrotus purpuratus clone R3-1007A24, W... 48 0.75 1
(AC172285) Bos taurus clone CH240-202G12, WORKING DRAFT SEQU... 48 0.75 1
(AC165129) Bos taurus clone CH240-160I7, WORKING DRAFT SEQUE... 48 0.75 1
(ED236371) AUAC-aak91d06.b1 Ascaris suum whole genome shotgu... 48 0.75 1
(CR243164) Reverse strand read from insert in 5'HPRT inserti... 48 0.75 1
(DR717305) AGENCOURT_55146078 NICHD_XGC_Emb10 Xenopus laevis... 48 0.75 1
(DC099406) Xenopus laevis NBRP cDNA clone:rxl317d02, 3' end. 48 0.75 1
(DC079125) Xenopus laevis NBRP cDNA clone:rxl267h06, 3' end. 48 0.75 1
(DC032628) Xenopus laevis NBRP cDNA clone:rxlk166i15ex, 3' end. 48 0.75 1
(CN498665) H04_01856.AB1 Diabrotica virgifera virgifera midg... 48 0.75 1
(BP738238) Xenopus laevis NBRP cDNA clone:XL515l10ex, 3' end. 48 0.75 1
(BP734944) Xenopus laevis NBRP cDNA clone:XL503j03ex, 3' end. 48 0.75 1
(BP701997) Xenopus laevis NBRP cDNA clone:XL503j03ex, 5' end. 48 0.75 1
(BJ637705) Xenopus laevis cDNA clone:XL195h14, 3' end. 48 0.75 1
(BJ055652) Xenopus laevis cDNA clone:XL050a22, 3' end, singl... 48 0.75 1
(BI450356) dag32d03.x3 Blackshear/Soares normalized Xenopus ... 48 0.75 1
(EY480137) CBBP10660.fwd CBBP Hirudo medicinalis hermaphrodi... 48 0.75 1
(EX849445) CBNC7929.rev CBNC Phycomyces blakesleeanus NRRL15... 48 0.75 1
(EW767233) ST020035B20D10 Normalized and subtracted western ... 48 0.75 1
(CP000829) Streptococcus pyogenes NZ131, complete genome. 48 0.75 1
(FI286454) AdH1148-CPY2-G20TR AdH1 Arachis duranensis genomi... 36 0.75 2
(EU024653) Polistes sp. MD1 mitochondrion, partial genome. 34 0.76 5
(EJ908276) 1093018524209 Global-Ocean-Sampling_GS-30-02-01-1... 38 0.76 2
(AM439620) Vitis vinifera contig VV78X145373.7, whole genome... 40 0.76 4
(EI891574) CAH1-59N13TR CAA1Ba Cicer arietinum genomic clone... 38 0.77 2
(AB100055) Thymelicus lineola mitochondrial ND5 gene for NAD... 42 0.78 2
(AF466146) Melipona bicolor mitochondrial genome, partial se... 32 0.80 6
(CR356240) Zebrafish DNA sequence from clone CH211-226E7 in ... 36 0.81 6
(CU856686) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 0.82 6
(AC116925) Dictyostelium discoideum chromosome 2 map 4189423... 32 0.85 7
(AL117206) Caenorhabditis elegans YAC Y67A10A. 40 0.85 6
(AL929353) Plasmodium falciparum strain 3D7, chromosome 5, s... 36 0.87 7
(AL844509) Plasmodium falciparum chromosome 13. 42 0.87 9
(AC124586) Mus musculus BAC clone RP23-132E20 from 12, compl... 42 0.88 3
(BX936447) Zebrafish DNA sequence from clone DKEY-13D5 in li... 42 0.89 6
(BA000017) Staphylococcus aureus subsp. aureus Mu50 DNA, com... 36 0.91 20
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 36 0.92 10
(DX411982) SOYFL86TV LargeInsertSoybeanGenLibBuild4 Glycine ... 30 0.94 4
(AC116922) Dictyostelium discoideum chromosome 2 map 6061442... 34 1.0 6
(AM483265) Vitis vinifera contig VV78X184666.11, whole genom... 42 1.0 2
(DQ927304) Tetrahymena paravorax strain RP mitochondrion, co... 34 1.0 5
(AL356269) Human DNA sequence from clone RP11-420J12 on chro... 40 1.1 5
(AC189384) Brassica rapa subsp. pekinensis clone KBrB052E10,... 34 1.1 7
(FE117665) LV_HC_RA066I18f Litopenaeus vannamei hemocyte cDN... 36 1.1 3
(Z36534) D.discoideum (Ax3-K) ponA gene. 34 1.2 3
(BJ378612) Dictyostelium discoideum cDNA clone:ddc32d11, 3' ... 42 1.2 2
(DC227908) Plasmodium berghei strain ANKA cDNA clone:SG01051... 32 1.2 3
(DD391859) Method and nucleic acids for the improved treatme... 36 1.2 3
(DD391585) Method and nucleic acids for the improved treatme... 36 1.2 3
(DD209214) test. 36 1.2 3
(DD209086) test. 36 1.2 3
(DD061387) Methods and nucleic acids for the analysis of he... 36 1.2 3
(DD061241) Methods and nucleic acids for the analysis of he... 36 1.2 3
(CS250592) Sequence 136 from Patent WO2005123945. 36 1.2 3
(CS250510) Sequence 54 from Patent WO2005123945. 36 1.2 3
(CQ807115) Sequence 565 from Patent WO2004035803. 36 1.2 3
(CQ806841) Sequence 291 from Patent WO2004035803. 36 1.2 3
(BD452590) Diagnosis of Diseases Associated with tumor suppr... 36 1.2 3
(AX826051) Sequence 303 from Patent WO03072821. 36 1.2 3
(AX825923) Sequence 175 from Patent WO03072821. 36 1.2 3
(AX822411) Sequence 303 from Patent EP1340818. 36 1.2 3
(AX822283) Sequence 175 from Patent EP1340818. 36 1.2 3
(AX795895) Sequence 238 from Patent WO03052135. 36 1.2 3
(AX795779) Sequence 122 from Patent WO03052135. 36 1.2 3
(AX598949) Sequence 289 from Patent WO02077272. 36 1.2 3
(AX598803) Sequence 143 from Patent WO02077272. 36 1.2 3
(AX348615) Sequence 73 from Patent WO0202807. 36 1.2 3
(AX345478) Sequence 549 from Patent WO0200928. 36 1.2 3
(AX251069) Sequence 37 from Patent WO0168912. 36 1.2 3
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 36 1.2 17
(AM440284) Vitis vinifera contig VV78X161868.10, whole genom... 42 1.2 3
(EJ390055) 1092963906545 Global-Ocean-Sampling_GS-28-01-01-1... 38 1.3 3
(AE017341) Cryptococcus neoformans var. neoformans JEC21 chr... 34 1.3 2
(AC004688) Plasmodium falciparum chromosome 12 clone PFYAC69... 34 1.3 8
(AM476356) Vitis vinifera, whole genome shotgun sequence, co... 38 1.3 5
(AC115594) Dictyostelium discoideum chromosome 2 map 4071862... 32 1.3 6
(AY894835) Phytophthora infestans haplotype Ia mitochondrion... 34 1.4 4
(U17009) Phytophthora infestans mitochondrion, complete genome. 34 1.4 4
(BS000216) Pan troglodytes chromosome 22 clone:RP43-057N15, ... 38 1.4 4
(EJ984967) 1093023005228 Global-Ocean-Sampling_GS-30-02-01-1... 36 1.4 2
(EJ831326) 1093017581905 Global-Ocean-Sampling_GS-30-02-01-1... 34 1.5 3
(AL049185) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 36 1.5 2
(AL844506) Plasmodium falciparum chromosome 7. 46 1.5 8
(AM435055) Vitis vinifera contig VV78X253897.5, whole genome... 42 1.5 2
(CR382400) Plasmodium falciparum chromosome 6, complete sequ... 34 1.5 2
(AF275224) Colophina clematis 12S small subunit ribosomal RN... 40 1.5 2
(D31785) Pichia canadensis mitochondrial genomic DNA, comple... 38 1.5 7
(AC098103) Rattus norvegicus clone CH230-83A19, *** SEQUENCI... 34 1.5 2
(AC127880) Rattus norvegicus clone CH230-50O8, *** SEQUENCIN... 34 1.5 2
(AC181377) Strongylocentrotus purpuratus clone R3-1116L14, W... 36 1.5 6
(AC163815) Bos taurus clone CH240-134F4, *** SEQUENCING IN P... 32 1.5 2
(AC163812) Bos taurus clone CH240-134J22, *** SEQUENCING IN ... 32 1.5 2
(AC103546) Rattus norvegicus clone CH230-79A7, *** SEQUENCIN... 36 1.5 2
(AC127913) Rattus norvegicus clone CH230-208O8, *** SEQUENCI... 36 1.5 2
(AC178139) Strongylocentrotus purpuratus clone R3-3078J17, W... 34 1.5 2
(EJ912922) 1093018546701 Global-Ocean-Sampling_GS-30-02-01-1... 34 1.5 3
(AC097250) Rattus norvegicus clone CH230-164D24, WORKING DRA... 34 1.5 2
(AC167446) Bos taurus clone CH240-40G13, WORKING DRAFT SEQUE... 32 1.5 2
(AC096353) Rattus norvegicus clone CH230-33N6, *** SEQUENCIN... 32 1.5 2
(AC136584) Rattus norvegicus clone CH230-6N19, WORKING DRAFT... 36 1.5 2
(AC096364) Rattus norvegicus clone CH230-59C15, WORKING DRAF... 32 1.5 2
(BX511212) Zebrafish DNA sequence from clone CH211-127A14 in... 34 1.5 2
(AC180908) Strongylocentrotus purpuratus clone R3-3064K23, W... 34 1.5 2
(CT025861) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 1.5 2
(AC112807) Rattus norvegicus clone CH230-264I7, WORKING DRAF... 34 1.5 2
(AC169424) Bos taurus clone CH240-203M15, WORKING DRAFT SEQU... 34 1.5 2
(AC181496) Strongylocentrotus purpuratus clone R3-1111E20, W... 36 1.5 2
(BX248102) Zebrafish DNA sequence from clone CH211-243F3 in ... 36 1.5 2
(BX120005) Zebrafish DNA sequence from clone RP71-56I13 in l... 34 1.6 2
(AY898628) Phytophthora infestans haplotype IIb mitochondrio... 34 1.6 4
(AP000673) Homo sapiens genomic DNA, chromosome 11q, clone:C... 36 1.6 8
(AC179177) Strongylocentrotus purpuratus clone R3-1107H1, WO... 36 1.6 2
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 38 1.6 5
(BX511256) Zebrafish DNA sequence from clone DKEY-58M10 in l... 38 1.6 5
(AC173487) Strongylocentrotus purpuratus clone R3-3025A17, W... 42 1.6 3
(AM475388) Vitis vinifera, whole genome shotgun sequence, co... 32 1.6 2
(FP102516) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 32 1.7 2
(AC006752) Caenorhabditis elegans clone Y39H10, *** SEQUENCI... 40 1.7 7
(AM429223) Vitis vinifera contig VV78X259035.12, whole genom... 32 1.7 2
(AM462320) Vitis vinifera contig VV78X073053.11, whole genom... 36 1.7 2
(AC176076) Strongylocentrotus purpuratus clone R3-1L01, WORK... 44 1.7 4
(AC010211) Drosophila melanogaster clone BACR26C09, complete... 44 1.7 4
(AE014845) Plasmodium falciparum 3D7 chromosome 12, section ... 36 1.8 9
(AE016821) Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 1.8 6
(ER599192) 1093016235683 Global-Ocean-Sampling_GS-36-01-01-2... 32 1.8 3
(AM456826) Vitis vinifera, whole genome shotgun sequence, co... 32 1.8 5
(AP009325) Musa balbisiana genomic DNA, BAC clone:MBP_71C19. 42 1.8 6
(EF650237) Megaphorus pulchrus 28S ribosomal RNA gene, parti... 36 1.9 3
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 36 1.9 12
(AE016826) Buchnera aphidicola str. Bp (Baizongia pistaciae)... 38 1.9 16
(EY297205) CAWX13235.fwd CAWX Helobdella robusta Primary Ear... 34 1.9 3
(AM465095) Vitis vinifera contig VV78X127727.18, whole genom... 46 1.9 2
(CU679996) Synthetic construct Homo sapiens gateway clone IM... 34 2.0 2
(ER601561) 1093016247758 Global-Ocean-Sampling_GS-36-01-01-2... 36 2.0 3
(ER588087) 1093016178931 Global-Ocean-Sampling_GS-36-01-01-2... 36 2.0 2
(EY369150) CAXA12205.fwd CAXA Helobdella robusta Subtracted ... 36 2.0 2
(EY335019) CAWY6750.fwd CAWY Helobdella robusta Subtracted E... 34 2.0 2
(EY367426) CAXA11258.rev CAXA Helobdella robusta Subtracted ... 34 2.0 2
(EI192192) ZMMBBb0091B19.fv ZMMBB_VAL Zea mays genomic clone... 36 2.0 2
(ED982996) hfqb0091B19.fq.ab1 ZMMBB_VAL Zea mays genomic clo... 36 2.0 2
(AU284928) Dictyostelium discoideum gamete cDNA clone:FC-BQ0... 34 2.0 2
(BJ446512) Dictyostelium discoideum cDNA clone:ddv62o23, 3' ... 34 2.0 2
(CU748097) A BAC library has been constructed from PN40024 g... 32 2.0 2
(EH014698) USDA-FP_187373 Lysiphlebus testaceipes adult whol... 32 2.0 2
(AC090834) Homo sapiens chromosome 11 clone CTD-2517D11 map ... 40 2.0 5
(EL502600) D02_PFLAB1-L-PLATE18B.AB1 Blood stage Plasmodium ... 34 2.0 2
(EL504873) E05_2318_1.AB1 Blood stage Plasmodium falciparum ... 34 2.0 2
(FI107402) 33-L103336-1033-002-A10-CCfw IGS-SCF-1033 Bvu-KWS... 34 2.0 2
(FH333065) CHO_OF4585xk14f1.ab1 CHO_OF4 Nicotiana tabacum ge... 34 2.0 2
(DE102369) Oryzias latipes DNA, clone: ola1-135N24.R, genomi... 34 2.0 2
(EL493418) B03_PFBAMHI-M-T3-PLATE28A.AB1 Blood stage Plasmod... 36 2.0 2
(DX219514) OR_ABa0095G21.r OR_ABa Oryza ridleyi genomic clon... 36 2.0 2
(AL808138) Mouse DNA sequence from clone RP23-84C18 on chrom... 40 2.0 5
(EW678858) CE1005A08.g Rhipicephalus (boophilus) microplus B... 34 2.0 3
(FG285891) 1108770704094 New World Screwworm Egg 9261 ESTs C... 36 2.0 3
(EL510038) H12_PF-SAU3A-T3-M-P18_D.AB1 Blood stage Plasmodiu... 34 2.0 2
(EL510037) H12_PF-SAU3A-T3-M-P18.AB1 Blood stage Plasmodium ... 34 2.0 2
(AU263293) Dictyostelium discoideum vegetative cDNA clone:VS... 34 2.0 2
(AU037422) Dictyostelium discoideum slug cDNA, clone SSD618. 34 2.0 2
(AU037227) Dictyostelium discoideum slug cDNA, clone SSB633. 34 2.1 2
(AZ032597) RPCI-23-347D12.TJ RPCI-23 Mus musculus genomic cl... 34 2.1 2
(AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2... 36 2.1 7
(EC761328) PSE00007644 rw_mgpallid Polysphondylium pallidum ... 34 2.1 2
(AJ785637) Pryeria sinica partial mitochondrial 12S rRNA gen... 42 2.1 2
(FL645010) TS46-D12 Reticulitermes flavipes symbiont library... 32 2.1 2
(BJ418917) Dictyostelium discoideum cDNA clone:ddv34p08, 5' ... 42 2.1 2
(AF010553) Plasmodium falciparum microsatellite TA54 sequence. 34 2.1 2
(AP009942) Lotus japonicus genomic DNA, clone: LjB18I11, BM0... 32 2.1 7
(CT634907) Danio rerio EST, clone ZF_mu_92f16 5'. 36 2.2 2
(G38841) TA54 Plasmodium falciparum haploid Plasmodium falci... 34 2.2 2
(AX458471) Sequence 17 from Patent WO0246454. 36 2.2 4
(AF151111) Dictyostelium discoideum cheater ChtA (chtA) gene... 36 2.2 3
(DY307285) Cm_mx1_57h05_SP6 Green Shore Crab Multiple Tissue... 44 2.2 2
(EG551016) MM01G16_RP Sugar Beet germination cDNA library Be... 32 2.2 4
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699... 34 2.2 19
(DX074300) KBrB084O22R KBrB, Brassica rapa BamHI BAC library... 42 2.2 2
(EC744291) PSE00005445 rw_mgpallid Polysphondylium pallidum ... 34 2.3 2
(AL109814) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 34 2.3 8
(AM486022) Vitis vinifera contig VV78X235846.4, whole genome... 38 2.3 2
(EY322561) CAWX8514.rev CAWX Helobdella robusta Primary Earl... 44 2.4 2
(AM487759) Vitis vinifera contig VV78X091660.3, whole genome... 34 2.4 3
(GE665967) CBUC7810.b1 B.anynana_abdomen_nosize Bicyclus any... 30 2.4 4
(BX465845) Zebrafish DNA sequence from clone DKEY-261A10 in ... 36 2.5 6
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 34 2.5 6
(BH550489) BOGIB24TR BOGI Brassica oleracea genomic clone BO... 38 2.5 2
(AL034560) Plasmodium falciparum MAL3P8. 36 2.5 9
(CF667361) RTCNT1_29_E10.g1_A029 Root control Pinus taeda cD... 38 2.5 2
(AM441653) Vitis vinifera contig VV78X110885.2, whole genome... 32 2.5 4
(GE738441) CBUG2285.g1 B.anynana_wing.LCPP_nosize Bicyclus a... 30 2.5 4
(GE738393) CBUG7652.b1 B.anynana_wing.LCPP_nosize Bicyclus a... 30 2.6 4
(DY308211) Cm_mx1_68b12_SP6 Green Shore Crab Multiple Tissue... 44 2.6 2
(GE683707) CBUA7604.b1 B.anynana_head_nosize Bicyclus anynan... 30 2.6 4
(FG294764) 1108770717863 New World Screwworm Larvae 9387 EST... 34 2.6 4
(GE684068) CBUA861.g1 B.anynana_head_nosize Bicyclus anynana... 30 2.6 4
(GE683667) CBUA943.b1 B.anynana_head_nosize Bicyclus anynana... 30 2.6 4
(GE657886) CBUF3244.b1 B.anynana_abdomen_2-10kb Bicyclus any... 30 2.6 4
(EY301592) CAWX15671.rev CAWX Helobdella robusta Primary Ear... 36 2.7 2
(GE738300) CBUG3299.b1 B.anynana_wing.LCPP_nosize Bicyclus a... 30 2.7 4
(GE683972) CBUA7604.g1 B.anynana_head_nosize Bicyclus anynan... 30 2.7 4
(GE683710) CBUA861.b1 B.anynana_head_nosize Bicyclus anynana... 30 2.7 4
(GE683665) CBUA6077.b1 B.anynana_head_nosize Bicyclus anynan... 30 2.7 4
(GE665944) CBUC3535.b1 B.anynana_abdomen_nosize Bicyclus any... 30 2.7 4
(GE684075) CBUA943.g1 B.anynana_head_nosize Bicyclus anynana... 30 2.7 4
(GE683729) CBUA4599.b1 B.anynana_head_nosize Bicyclus anynan... 30 2.7 4
(GE683716) CBUA1959.b1 B.anynana_head_nosize Bicyclus anynan... 30 2.7 4
(GE665968) CBUC3808.b1 B.anynana_abdomen_nosize Bicyclus any... 30 2.7 4
(GE665963) CBUC3366.b1 B.anynana_abdomen_nosize Bicyclus any... 30 2.7 4
(AJ011856) Saccharomyces cerevisiae complete mitochondrial g... 32 2.7 8
(GE738303) CBUG681.b1 B.anynana_wing.LCPP_nosize Bicyclus an... 30 2.7 4
(GE738302) CBUG5496.b1 B.anynana_wing.LCPP_nosize Bicyclus a... 30 2.7 4
(GE738301) CBUG2285.b1 B.anynana_wing.LCPP_nosize Bicyclus a... 30 2.7 4
(GE683753) CBUA3878.b1 B.anynana_head_nosize Bicyclus anynan... 30 2.7 4
(AM285311) Spiroplasma citri GII3-3X chromosome, contig Cont... 32 2.7 6
(AC116918) Dictyostelium discoideum chromosome 2 map 6143698... 38 2.7 3
(GE683652) CBUA5123.b1 B.anynana_head_nosize Bicyclus anynan... 30 2.7 4
(GE683991) CBUA3719.g1 B.anynana_head_nosize Bicyclus anynan... 30 2.7 4
(GE683723) CBUA1819.b1 B.anynana_head_nosize Bicyclus anynan... 30 2.7 4
(GE665965) CBUC4649.b1 B.anynana_abdomen_nosize Bicyclus any... 30 2.7 4
(GE738390) CBUG5184.b1 B.anynana_wing.LCPP_nosize Bicyclus a... 30 2.7 4
(AM456788) Vitis vinifera contig VV78X104670.13, whole genom... 36 2.7 4
(EU004203) Saccharomyces cerevisiae YJM789 mitochondrion, co... 34 2.7 8
(GE683996) CBUA1819.g1 B.anynana_head_nosize Bicyclus anynan... 30 2.8 4
(FH141558) CHO_OF3703xp09f1.ab1 CHO_OF3 Nicotiana tabacum ge... 40 2.8 2
(EK407296) 1095505083525 Global-Ocean-Sampling_GS-31-01-01-1... 44 2.9 2
(EK400149) 1095469537587 Global-Ocean-Sampling_GS-31-01-01-1... 44 2.9 2
(FH481262) CHO_OF4559xd21r1.ab1 CHO_OF4 Nicotiana tabacum ge... 40 2.9 2
(DU897670) 414982 Tomato HindIII BAC Library Solanum lycoper... 36 2.9 2
(EK538662) 1095516050152 Global-Ocean-Sampling_GS-32-01-01-1... 40 2.9 2
(AJ511533) Candida glabrata complete mitochondrial genome. 32 2.9 6
(CU207238) Zebrafish DNA sequence from clone CH211-221G5 in ... 46 3.0 1
(CT583719) Zebrafish DNA sequence from clone DKEY-112E7 in l... 46 3.0 1
(CR936500) Zebrafish DNA sequence from clone DKEY-274N8 in l... 46 3.0 1
(CR391908) Zebrafish DNA sequence from clone DKEY-225E11 in ... 46 3.0 1
(BX649370) Zebrafish DNA sequence from clone DKEY-97I11 in l... 46 3.0 1
(AL929103) Zebrafish DNA sequence from clone CH211-122O8. 46 3.0 1
(BK006340) TPA_exp: Drosophila virilis mitochondrion, comple... 46 3.0 1
(AL844489) Mouse DNA sequence from clone RP23-101P8 on chrom... 46 3.0 1
(AL365329) Mouse DNA sequence from clone RP23-181N5 on chrom... 46 3.0 1
(AC161508) Mus musculus chromosome 1, clone RP23-95L22, comp... 46 3.0 1
(AC197793) MACACA MULATTA BAC clone CH250-471N22 from chromo... 46 3.0 1
(AP007151) Aspergillus oryzae RIB40 genomic DNA, SC005. 46 3.0 1
(AM489053) Vitis vinifera contig VV78X103341.6, whole genome... 46 3.0 1
(AM472089) Vitis vinifera, whole genome shotgun sequence, co... 46 3.0 1
(AM459231) Vitis vinifera contig VV78X229005.3, whole genome... 46 3.0 1
(AM451997) Vitis vinifera contig VV78X020478.3, whole genome... 46 3.0 1
(AM448521) Vitis vinifera contig VV78X048661.5, whole genome... 46 3.0 1
(AM431407) Vitis vinifera contig VV78X066690.7, whole genome... 46 3.0 1
(AC210371) Solanum lycopersicum chromosome 7 clone C07SLm011... 46 3.0 1
(AC007519) Sequence of BAC F16N3 from Arabidopsis thaliana c... 46 3.0 1
(EU494474) Drosophila virilis voucher 105500 16S ribosomal R... 46 3.0 1
(EU494454) Drosophila iri voucher 109374 16S ribosomal RNA g... 46 3.0 1
(EU494422) Phortica picta voucher 114220 16S ribosomal RNA g... 46 3.0 1
(EU189430) Drosophila virilis strain 15010-1051.87 16S ribos... 46 3.0 1
(AF185058) Drosophila virilis 16S ribosomal RNA gene, partia... 46 3.0 1
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 46 3.0 1
(AL122006) Human DNA sequence from clone RP4-730H16 on chrom... 46 3.0 1
(AC161041) Mus musculus chromosome 1 clone RP24-285C21 map 1... 46 3.0 1
(AC147452) Ornithorhynchus anatinus clone OA_Bb-359D15, WORK... 46 3.0 1
(AC129796) Rattus norvegicus clone CH230-217A15, *** SEQUENC... 46 3.0 1
(AC116210) Rattus norvegicus clone CH230-32M5, *** SEQUENCIN... 46 3.0 1
(AC113816) Rattus norvegicus clone CH230-224O22, WORKING DRA... 46 3.0 1
(AC098913) Rattus norvegicus clone CH230-182P23, WORKING DRA... 46 3.0 1
(AC098240) Rattus norvegicus clone CH230-1E19, *** SEQUENCIN... 46 3.0 1
(AC095964) Rattus norvegicus clone CH230-11I21, *** SEQUENCI... 46 3.0 1
(CU469373) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.0 1
(CU466262) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 3.0 1
(CU463223) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.0 1
(CU424425) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.0 1
(CU104785) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 3.0 1
(CT956022) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.0 1
(AP008167) Lotus japonicus genomic DNA, chromosome 4, clone:... 46 3.0 1
(AL138929) Human DNA sequence *** SEQUENCING CANCELLED *** f... 46 3.0 1
(AC225680) Tachyglossus aculeatus clone TA_Ba-344E10, WORKIN... 46 3.0 1
(AC219233) Bos taurus clone CH240-333J15, WORKING DRAFT SEQU... 46 3.0 1
(AC211772) Macaca mulatta chromosome 14 clone CH250-205J17, ... 46 3.0 1
(AC197824) Macaca mulatta clone CH250-93K10, WORKING DRAFT S... 46 3.0 1
(AC195717) Ornithorhynchus anatinus clone OA_Bb-465K23, WORK... 46 3.0 1
(AC190085) Ornithorhynchus anatinus clone OA_Bb-516K24, WORK... 46 3.0 1
(AC187697) Callicebus moloch clone LB5-417F15, WORKING DRAFT... 46 3.0 1
(AC178863) Strongylocentrotus purpuratus clone R3-28K23, WOR... 46 3.0 1
(AC178247) Strongylocentrotus purpuratus clone R3-3086I2, WO... 46 3.0 1
(AC177019) Strongylocentrotus purpuratus clone R3-1038K12, W... 46 3.0 1
(AC168160) Bos taurus clone CH240-235G14, WORKING DRAFT SEQU... 46 3.0 1
(AK133680) Mus musculus adult male pituitary gland cDNA, RIK... 46 3.0 1
(AZ492693) 1M0326N24R Mouse 10kb plasmid UUGC1M library Mus ... 46 3.0 1
(AQ854888) CpG2103B CpIOWAgDNA1 Cryptosporidium parvum genom... 46 3.0 1
(FI059253) CHO_OF6618xl03r1.ab1 CHO_OF6 Nicotiana tabacum ge... 46 3.0 1
(FH188226) CHO_OF3437xd17f1.ab1 CHO_OF3 Nicotiana tabacum ge... 46 3.0 1
(FH185869) CHO_OF3431xe22f1.ab1 CHO_OF3 Nicotiana tabacum ge... 46 3.0 1
(FH018096) CHO_OF456xp21f2.ab1 CHO_OF Nicotiana tabacum geno... 46 3.0 1
(ET981167) CHO_OF728xh07r1.ab1 CHO_OF Nicotiana tabacum geno... 46 3.0 1
(ET811070) CHO_OF720xc05r1.ab1 CHO_OF Nicotiana tabacum geno... 46 3.0 1
(ET809711) CHO_OF716xj13r1.ab1 CHO_OF Nicotiana tabacum geno... 46 3.0 1
(ET766641) CHO_OF166xh12f1.ab1 CHO_OF Nicotiana tabacum geno... 46 3.0 1
(EJ576805) 1092960114006 Global-Ocean-Sampling_GS-29-01-01-1... 46 3.0 1
(EJ175047) 1092344097284 Global-Ocean-Sampling_GS-27-01-01-1... 46 3.0 1
(ED154113) AUAC-aag98c02.g1 Ascaris suum whole genome shotgu... 46 3.0 1
(DX440637) BE1085_D16_R IASMA L1 HindIII BAC library Vitis v... 46 3.0 1
(DX027561) KBrB023D05F KBrB, Brassica rapa BamHI BAC library... 46 3.0 1
(DX012750) KBrB003L22F KBrB, Brassica rapa BamHI BAC library... 46 3.0 1
(DH797853) Rattus norvegicus DNA, BAC clone: RNB1-392D06, 3'... 46 3.0 1
(CW513061) 115_3_10511206_1_30020 Sorghum unfiltered library... 46 3.0 1
(CW489523) fsbb001f274i02k0 Sorghum methylation filtered lib... 46 3.0 1
(CW466897) fsbb001f218f16f0 Sorghum methylation filtered lib... 46 3.0 1
(CW279267) 104_754_11406987_148_35439_016 Sorghum methylatio... 46 3.0 1
(CW093420) 104_456_10999766_148_37471_055 Sorghum methylatio... 46 3.0 1
(CW062033) 104_307_10521114_5_30083 Sorghum methylation filt... 46 3.0 1
(AG581553) Mus musculus molossinus DNA, clone:MSMg01-507G06.... 46 3.0 1
(CE362567) tigr-gss-dog-17000361549785 Dog Library Canis lup... 46 3.0 1
(EH623704) CHO_SL016xm02f1.ab1 CHO_SL Nicotiana tabacum cDNA... 46 3.0 1
(EH623698) CHO_SL016xk08f1.ab1 CHO_SL Nicotiana tabacum cDNA... 46 3.0 1
(EH619600) CHO_SL021xd07f2.ab1 CHO_SL Nicotiana tabacum cDNA... 46 3.0 1
(EH619550) CHO_SL021xm22f2.ab1 CHO_SL Nicotiana tabacum cDNA... 46 3.0 1
(EH619522) CHO_SL021xa16f1.ab1 CHO_SL Nicotiana tabacum cDNA... 46 3.0 1
(EH618369) CHO_SL012xi23f1.ab1 CHO_SL Nicotiana tabacum cDNA... 46 3.0 1
(EB575607) AGENCOURT_51187123 D. virilis EST Drosophila viri... 46 3.0 1
(EB575433) AGENCOURT_51102560 D. virilis EST Drosophila viri... 46 3.0 1
(EB575332) AGENCOURT_51876986 D. virilis EST Drosophila viri... 46 3.0 1
(EB574925) AGENCOURT_51198649 D. virilis EST Drosophila viri... 46 3.0 1
(EB574897) AGENCOURT_51107737 D. virilis EST Drosophila viri... 46 3.0 1
(EB574885) AGENCOURT_50408785 D. virilis EST Drosophila viri... 46 3.0 1
(EB574274) AGENCOURT_51200002 D. virilis EST Drosophila viri... 46 3.0 1
(EB574172) AGENCOURT_51796566 D. virilis EST Drosophila viri... 46 3.0 1
(EB574154) AGENCOURT_51774912 D. virilis EST Drosophila viri... 46 3.0 1
(EB574101) AGENCOURT_51115015 D. virilis EST Drosophila viri... 46 3.0 1
(EB573821) AGENCOURT_51203936 D. virilis EST Drosophila viri... 46 3.0 1
(EB573764) AGENCOURT_50987619 D. virilis EST Drosophila viri... 46 3.0 1
(EB573500) AGENCOURT_51878290 D. virilis EST Drosophila viri... 46 3.0 1
(EB573131) AGENCOURT_51186461 D. virilis EST Drosophila viri... 46 3.0 1
(EB573031) AGENCOURT_51185006 D. virilis EST Drosophila viri... 46 3.0 1
(EB572888) AGENCOURT_51903478 D. virilis EST Drosophila viri... 46 3.0 1
(EB572698) AGENCOURT_51101660 D. virilis EST Drosophila viri... 46 3.0 1
(EB572301) AGENCOURT_51776315 D. virilis EST Drosophila viri... 46 3.0 1
(EB572199) AGENCOURT_50937921 D. virilis EST Drosophila viri... 46 3.0 1
(EB571876) AGENCOURT_51193452 D. virilis EST Drosophila viri... 46 3.0 1
(EB571858) AGENCOURT_51199803 D. virilis EST Drosophila viri... 46 3.0 1
(EB571819) AGENCOURT_50939052 D. virilis EST Drosophila viri... 46 3.0 1
(EB571715) AGENCOURT_51106315 D. virilis EST Drosophila viri... 46 3.0 1
(EB569714) AGENCOURT_51778998 D. virilis EST Drosophila viri... 46 3.0 1
(EB569544) AGENCOURT_50939168 D. virilis EST Drosophila viri... 46 3.0 1
(EB569419) AGENCOURT_50420457 D. virilis EST Drosophila viri... 46 3.0 1
(EB569276) AGENCOURT_51778804 D. virilis EST Drosophila viri... 46 3.0 1
(EB568946) AGENCOURT_51776530 D. virilis EST Drosophila viri... 46 3.0 1
(EB568728) AGENCOURT_51781321 D. virilis EST Drosophila viri... 46 3.0 1
(EB568694) AGENCOURT_51204802 D. virilis EST Drosophila viri... 46 3.0 1
(EB568577) AGENCOURT_51183497 D. virilis EST Drosophila viri... 46 3.0 1
(EB568448) AGENCOURT_51109487 D. virilis EST Drosophila viri... 46 3.0 1
(EB568367) AGENCOURT_51356909 D. virilis EST Drosophila viri... 46 3.0 1
(EB568306) AGENCOURT_50937543 D. virilis EST Drosophila viri... 46 3.0 1
(EB568067) AGENCOURT_51908703 D. virilis EST Drosophila viri... 46 3.0 1

>(C84191) Dictyostelium discoideum slug cDNA, clone SSC466.
Length = 692

Score = 1168 bits (589), Expect = 0.0
Identities = 613/617 (99%)
Strand = Plus / Plus


Query: 411 ccanatttccatggcgacgatagcncatccagtggtggatatccattcgttccacngctg 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccanatttccatggcgacgatagcncatccagtggtggatatccattcgttccacngctg 60


Query: 471 gaattccaggtttattccatctctatggnaatgataaatacatctattacgatggcggat 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaattccaggtttattccatctctatggnaatgataaatacatctattacgatggcggat 120


Query: 531 tccaatacaattgtaatttnccaattgcattaattgaagcatcttcactatatcccaaat 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tccaatacaattgtaatttnccaattgcattaattgaagcatcttcactatatcccaaat 180


Query: 591 gcttcaaaattattattcatttcaattggaactggttatggtaaaaatgattcacccaat 650
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 181 gcttcaaaattattattcatttcaattggaactggttatggtaaaaatgattcncccaat 240


Query: 651 tattattgttcaaatgattcaactgatgatagggttgaagagtatttaaaacaatttcaa 710
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 241 tattattgttcaaatgattcaactgatgatagggttgaagagtatttaaancaatttcaa 300


Query: 711 gatcaatcatcaattggtggaattaaattaaaatcatctcaacaagcttctccaacaaaa 770
| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 301 gntcaatcatcaattggtggaattaaattaaaatcatctcaacaggcttctccaacaaaa 360


Query: 771 cttggtggaatctatgatttaattaaaaatttatataatctttatagaaattatgtcaat 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttggtggaatctatgatttaattaaaaatttatataatctttatagaaattatgtcaat 420


Query: 831 atgacagatacttatgtagttttacaacaatttttaaaagatcatcaattggatgaccat 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgacagatacttatgtagttttacaacaatttttaaaagatcatcaattggatgaccat 480


Query: 891 atattcacctatcgttttgatgtacaattagaatatgatattagtctacgtgatagttca 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atattcacctatcgttttgatgtacaattagaatatgatattagtctacgtgatagttca 540


Query: 951 ttacaagctgaacaagaaatgcaaagatcagtttatgattatgtaaattcaaatactagt 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttacaagctgaacaagaaatgcaaagatcagtttatgattatgtaaattcaaatactagt 600


Query: 1011 tttaagagatctgtttc 1027
|||||||||||||||||
Sbjct: 601 tttaagagatctgtttc 617

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,241,718,753
Number of extensions: 89378414
Number of successful extensions: 11377922
Number of sequences better than 10.0: 815
Length of query: 1136
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1112
Effective length of database: 99,340,224,878
Effective search space: 110466330064336
Effective search space used: 110466330064336
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.18
Homology vs Protein
Query= Contig-U01650-1 (Contig-U01650-1Q) /CSM_Contig/Contig-U01650-1Q.Seq.d
(1136 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

CP000246_2409(CP000246|pid:none) Clostridium perfringens ATCC 13... 39 0.26
CP000312_2129(CP000312|pid:none) Clostridium perfringens SM101, ... 39 0.26
BA000031_405(BA000031|pid:none) Vibrio parahaemolyticus RIMD 221... 36 2.2
CP000789_788(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 chr... 36 2.9
AM910995_355(AM910995|pid:none) Plasmodium knowlesi strain H chr... 35 6.4
CP000978_10(CP000978|pid:none) Borrelia duttonii Ly plasmid pl15... 35 6.4
AE014185_225(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 34 8.4

>CP000246_2409(CP000246|pid:none) Clostridium perfringens ATCC
13124, complete genome.
Length = 374

Score = 39.3 bits (90), Expect = 0.26
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Frame = +3

Query: 597 KLLFISIGTGYGKNDSPN---YYCSNDSTDDRVEEYLKQ--FQDQSSIGGIKLKSSQQAS 761
K+L +S TGYG N + N ND T+ V ++LK+ F D+S + G L +S
Sbjct: 3 KVLILSTSTGYGHNQAANSLMELIKNDDTEILVHDFLKENRFFDRSIVNGYDLCAS---- 58

Query: 762 PTKLGGIYDLIKNLYNLYRNYVNMTDTYVVL 854
LG +Y L+ + N+ ++N +++ L
Sbjct: 59 --SLGTLYGLLYKISNI--KFINNLVSFLFL 85

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,150,141,105
Number of extensions: 18437162
Number of successful extensions: 46712
Number of sequences better than 10.0: 7
Number of HSP's gapped: 46672
Number of HSP's successfully gapped: 7
Length of query: 378
Length of database: 1,051,180,864
Length adjustment: 130
Effective length of query: 248
Effective length of database: 630,428,194
Effective search space: 156346192112
Effective search space used: 156346192112
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.67 gvh: 0.16 alm: 0.44 top: 0.53 tms: 0.00 mit: 0.26 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

52.0 %: nuclear
32.0 %: cytoplasmic
8.0 %: vacuolar
4.0 %: cytoskeletal
4.0 %: Golgi

>> prediction for Contig-U01650-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 3
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0