Contig-U10248-1 |
Contig ID |
Contig-U10248-1 |
Contig update |
2002. 9.13 |
Contig sequence |
|
Gap |
no gap |
Contig length |
773 |
Chromosome number (1..6, M) |
6 |
Chromosome length |
3595308 |
Start point |
664521 |
End point |
665262 |
Strand (PLUS/MINUS) |
PLUS |
Number of clones |
13 |
Number of EST |
15 |
Link to clone list |
U10248 |
List of clone(s) |
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.10 |
Homology vs CSM-cDNA |
|
dna update |
2008.11.18 |
Homology vs DNA |
Query= Contig-U10248-1 (Contig-U10248-1Q) /CSM_Contig/Contig-U10248-1Q.Seq.d (773 letters)
Database: ddbj_A 92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(C92753) Dictyostelium discoideum slug cDNA, clone SSF195. 585 0.0 6 (C89790) Dictyostelium discoideum slug cDNA, clone SSG849. 391 0.0 6 (C93090) Dictyostelium discoideum slug cDNA, clone SSF791. 377 0.0 4 (C93969) Dictyostelium discoideum slug cDNA, clone SSC869. 377 0.0 4 (AU038248) Dictyostelium discoideum slug cDNA, clone SSH468. 377 0.0 4 (AU264263) Dictyostelium discoideum vegetative cDNA clone:VS... 367 e-178 5 (AU264264) Dictyostelium discoideum vegetative cDNA clone:VS... 377 e-174 4 (AU263986) Dictyostelium discoideum vegetative cDNA clone:VS... 377 e-154 5 (C24651) Dictyostelium discoideum slug cDNA, clone SL-X053. 472 e-151 2 (BJ432673) Dictyostelium discoideum cDNA clone:ddv19l07, 3' ... 377 e-150 3 (AU037344) Dictyostelium discoideum slug cDNA, clone SSD504. 224 e-121 3 (AU038742) Dictyostelium discoideum slug cDNA, clone SSL425. 188 5e-93 3 (AU073381) Dictyostelium discoideum slug cDNA, clone SSG849. 307 3e-79 1 (AU072322) Dictyostelium discoideum slug cDNA, clone SSE186. 188 2e-43 1 (C93909) Dictyostelium discoideum slug cDNA, clone SSL855. 88 1e-27 3 (C93260) Dictyostelium discoideum slug cDNA, clone SSM886. 88 1e-27 3 (C93756) Dictyostelium discoideum slug cDNA, clone SSL682. 88 1e-27 3 (C92440) Dictyostelium discoideum slug cDNA, clone SSE547. 88 1e-27 3 (C93305) Dictyostelium discoideum slug cDNA, clone SSM603. 88 1e-27 3 (AU038347) Dictyostelium discoideum slug cDNA, clone SSH594. 88 1e-27 3 (C90430) Dictyostelium discoideum slug cDNA, clone SSI475. 88 1e-27 3 (BJ430080) Dictyostelium discoideum cDNA clone:ddv6c03, 3' e... 88 1e-27 3 (AU071405) Dictyostelium discoideum slug cDNA, clone SSB423. 88 1e-27 3 (AU071406) Dictyostelium discoideum slug cDNA, clone SSB424. 88 1e-27 3 (C93700) Dictyostelium discoideum slug cDNA, clone SSL623. 76 4e-24 3 (L21010) Dictyostelium discoideum Rab1B mRNA, 3' end of cds. 52 1e-16 3 (EE671325) SAAH-aac56f11.g1 Agen 0058 Schmidtea mediterranea... 78 1e-15 2 (EC617428) SAAH-aaa40d06.g1 Agen 0058 Schmidtea mediterranea... 78 1e-15 2 (EE666041) SAAH-aab55g07.g1 Agen 0058 Schmidtea mediterranea... 78 1e-15 2 (EG413517) SAAH-aab11d02.b1 Agen 0058 Schmidtea mediterranea... 78 1e-15 2 (EG409726) SAAH-aaa40d06.b1 Agen 0058 Schmidtea mediterranea... 78 1e-15 2 (EG416999) SAAH-aab55g07.b1 Agen 0058 Schmidtea mediterranea... 78 1e-15 2 (EE282655) SAAH-aab11d02.g1 Agen 0058 Schmidtea mediterranea... 78 1e-15 2 (EG412200) SAAH-aaa93a01.b1 Agen 0058 Schmidtea mediterranea... 78 1e-15 2 (EE281430) SAAH-aaa93a01.g1 Agen 0058 Schmidtea mediterranea... 78 1e-15 2 (CX093712) EHAFO92TR E. histolytica Normalized cDNA library ... 68 8e-15 2 (CX096754) EHAGW91TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX095550) EHAGF29TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX089606) EHAE145TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX087978) EHAD958TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX087205) EHACW03TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX087006) EHACT15TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX083514) EHABC79TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX083384) EHABA95TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX096532) EHAGT80TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX094558) EHAG093TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX089578) EHAE104TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX089231) EHADU91TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX089049) EHADR49TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX093218) EHAFH94TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX098528) EHAHN04TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX089366) EHADX32TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX099079) EHAHU93TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX099390) EHAHZ58TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX085209) EHAC232TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX087202) EHACV95TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX082060) EHAAR08TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX091347) EHAER18TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX089538) EHAE015TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX091910) EHAEZ32TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX086526) EHACL32TRB E. histolytica Normalized cDNA library... 68 1e-14 2 (CX085802) EHACA63TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (AB054578) Entamoeba histolytica EhRab1A mRNA for small GTPa... 68 1e-14 2 (CX085623) EHAC819TR E. histolytica Normalized cDNA library ... 68 1e-14 2 (CX087103) EHACU61TR E. histolytica Normalized cDNA library ... 68 2e-14 2 (CX094135) EHAFU88TR E. histolytica Normalized cDNA library ... 68 3e-14 2 (CX083995) EHABK22TR E. histolytica Normalized cDNA library ... 68 4e-14 2 (DN302017) PL04024A2H01 cDNA from sexually mature hermaphodi... 70 2e-13 2 (EC615581) SAAH-aaa66h03.g1 Agen 0058 Schmidtea mediterranea... 70 2e-13 2 (DN313077) PL06014B1F11 cDNA from juvenile hermaphodites Sch... 70 2e-13 2 (DN308618) PL05017A1F04 cDNA from sexually mature hermaphodi... 70 2e-13 2 (DN314465) PL06018A2F09 cDNA from juvenile hermaphodites Sch... 70 2e-13 2 (EG350396) SAAH-aad11e09.g1 Agen 0058 Schmidtea mediterranea... 70 2e-13 2 (EE672460) SAAH-aab74f01.g1 Agen 0058 Schmidtea mediterranea... 70 2e-13 2 (EG351240) SAAH-aad16g09.g1 Agen 0058 Schmidtea mediterranea... 70 2e-13 2 (EG348194) SAAH-aac84f09.g1 Agen 0058 Schmidtea mediterranea... 70 2e-13 2 (EC618058) SAAH-aaa63g09.g1 Agen 0058 Schmidtea mediterranea... 70 2e-13 2 (DN312681) PL06013B1D07 cDNA from juvenile hermaphodites Sch... 70 2e-13 2 (EG347207) SAAH-aaa75a09.g1 Agen 0058 Schmidtea mediterranea... 70 2e-13 2 (EG351239) SAAH-aad16g09.b1 Agen 0058 Schmidtea mediterranea... 68 9e-13 2 (L21009) Dictyostelium discoideum Rab1A mRNA, complete cds. 84 9e-12 1 (AU270410) Dictyostelium discoideum vegetative cDNA clone:VS... 84 9e-12 1 (AU061016) Dictyostelium discoideum slug cDNA, clone SLC626. 84 9e-12 1 (BJ331981) Dictyostelium discoideum cDNA clone:dda37f20, 5' ... 84 9e-12 1 (C89695) Dictyostelium discoideum slug cDNA, clone SSA695. 66 1e-11 2 (EE722787) camnoP089E11 camno Biomphalaria glabrata cDNA clo... 62 2e-11 3 (EE723373) campoP091F06 campo Biomphalaria glabrata cDNA clo... 62 2e-11 3 (AU284822) Dictyostelium discoideum gamete cDNA clone:FC-BM0... 62 1e-10 2 (CX082008) EHAAQ33TR E. histolytica Normalized cDNA library ... 50 1e-10 3 (DN297967) PL04011A1H10 cDNA from sexually mature hermaphodi... 60 2e-10 2 (C90802) Dictyostelium discoideum slug cDNA, clone SSJ166. 44 3e-10 3 (DW089133) CLPY13252.b1_G02.ab1 CLP(XYZ) lettuce perennis La... 42 6e-10 3 (EC823893) SME00006668 esmbsro2 Sawyeria marylandensis cDNA,... 60 1e-09 3 (AU037699) Dictyostelium discoideum slug cDNA, clone SSE186. 76 2e-09 1 (AJ765704) Gerbera hybrid cv. 'Terra Regina' EST, clone G000... 48 3e-09 4 (AJ765567) Gerbera hybrid cv. 'Terra Regina' EST, clone G000... 48 3e-09 4 (AM821874) Nicotiana tabacum EST, clone nt005170041. 74 9e-09 1 (AJ750252) Gerbera hybrid cv. 'Terra Regina' EST, clone G000... 48 9e-09 4 (DW113074) CLRY1165.b1_I03.ab1 CLR(XYZ) lettuce serriola Lac... 48 9e-09 4 (AJ759762) Gerbera hybrid cv. 'Terra Regina' EST, clone G000... 48 9e-09 4
>(C92753) Dictyostelium discoideum slug cDNA, clone SSF195. Length = 666
Score = 585 bits (295), Expect(6) = 0.0 Identities = 301/303 (99%) Strand = Plus / Plus
Query: 78 gattcagcagttggaaaaacatcgttattattaagatttacagatcccaataattttcaa 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gattcagcagttggaaaaacatcgttattattaagatttacagatcccaataattttcaa 60
Query: 138 gagacttcagtaaatatgactagcgttgattataaaaataaaaatataactattgatgga 197 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 61 gagacttcagtaaatatgactagtgttgattataaaaataaaaatataactattgatgga 120
Query: 198 agaacatttaatttacaaatttgggatacagcaggacaagagagattcagaacaattaca 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 agaacatttaatttacaaatttgggatacagcaggacaagagagattcagaacaattaca 180
Query: 258 tcatctttttatagaggagcacatggtgttttagtatgttatgatgtcactgatcaactt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tcatctttttatagaggagcacatggtgttttagtatgttatgatgtcactgatcaactt 240
Query: 318 acatataataacgttgggttatggatgcaagaaattcaaagatatggagtacttggcgtt 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 241 acatataataacgttgggttatggatgcaagaaattcaaagatatggagtacttggagtt 300
Query: 378 agt 380 ||| Sbjct: 301 agt 303
Score = 367 bits (185), Expect(6) = 0.0 Identities = 185/185 (100%) Strand = Plus / Plus
Query: 432 ttaacgcttcaattgcccaagaatacgctgatattctcggtattccattcattgaaactt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 ttaacgcttcaattgcccaagaatacgctgatattctcggtattccattcattgaaactt 409
Query: 492 ctgctacaactggtgttaatgtagaagaggctttcatggcaatggcagatgaaatttata 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 ctgctacaactggtgttaatgtagaagaggctttcatggcaatggcagatgaaatttata 469
Query: 552 gaaatcatataggtggctcaaaaccttctgttgtaaaaccagtatgtggaagtcctcccc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 gaaatcatataggtggctcaaaaccttctgttgtaaaaccagtatgtggaagtcctcccc 529
Query: 612 gcacg 616 ||||| Sbjct: 530 gcacg 534
Score = 83.8 bits (42), Expect(6) = 0.0 Identities = 48/50 (96%) Strand = Plus / Plus
Query: 382 agagtttgagttggaaacaaatgcgatctcgaagatagaaaattggttaa 431 ||||||| ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 304 agagttttagttggaaacaaatgtgatctcgaagatagaaaattggttaa 353
Score = 71.9 bits (36), Expect(6) = 0.0 Identities = 36/36 (100%) Strand = Plus / Plus
Query: 625 tatttgctaattttaaagaagagtggatagaagaag 660 |||||||||||||||||||||||||||||||||||| Sbjct: 543 tatttgctaattttaaagaagagtggatagaagaag 578
Score = 36.2 bits (18), Expect(6) = 0.0 Identities = 21/22 (95%) Strand = Plus / Plus
Query: 665 gggtttttgccaattgttttaa 686 ||||||||||||||| |||||| Sbjct: 581 gggtttttgccaattattttaa 602
Score = 36.2 bits (18), Expect(6) = 0.0 Identities = 21/22 (95%) Strand = Plus / Plus
Query: 688 agttttatataattgcaacatc 709 ||||| |||||||||||||||| Sbjct: 603 agtttcatataattgcaacatc 624
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 92845959 Number of Hits to DB: 933,736,837 Number of extensions: 65320813 Number of successful extensions: 6633307 Number of sequences better than 10.0: 4152 Length of query: 773 Length of database: 95,242,211,685 Length adjustment: 24 Effective length of query: 749 Effective length of database: 97,308,875,965 Effective search space: 72884348097785 Effective search space used: 72884348097785 X1: 11 (21.8 bits) S2: 22 (44.1 bits)
|
protein update |
2009. 6.27 |
Homology vs Protein |
Query= Contig-U10248-1 (Contig-U10248-1Q) /CSM_Contig/Contig-U10248-1Q.Seq.d (773 letters)
Database: nrp_A 3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
(Q54E92) RecName: Full=Ras-related protein RabG1; 231 5e-99 (P34140) RecName: Full=Ras-related protein Rab-1B; 140 3e-44 EF103367_1(EF103367|pid:none) Haliotis discus discus Ras-related... 140 1e-42 BT057068_1(BT057068|pid:none) Salmo salar clone ssal-eve-570-039... 140 1e-42 BC097013_1(BC097013|pid:none) Danio rerio zgc:86773, mRNA (cDNA ... 139 1e-42 BT059700_1(BT059700|pid:none) Salmo salar clone ssal-rgf-002-342... 140 3e-42 (Q05974) RecName: Full=Ras-related protein Rab-1A; &S38339(S383... 140 5e-42 DQ214474_1(DQ214474|pid:none) Taeniopygia guttata clone 0063P003... 140 9e-42 (P62820) RecName: Full=Ras-related protein Rab-1A; AltName: Full... 140 9e-42 AL606522_3(AL606522|pid:none) Mouse DNA sequence from clone RP23... 140 9e-42 (P22125) RecName: Full=Ras-related protein ORAB-1; &M38393_1(M3... 140 9e-42 L21010_1(L21010|pid:none) Dictyostelium discoideum Rab1B mRNA, 3... 134 1e-41 BC045014_1(BC045014|pid:none) Xenopus laevis RAB1, member RAS on... 140 1e-41 (Q52NJ2) RecName: Full=Ras-related protein Rab-1A; &AY996813_1(... 139 1e-41 AC183496_25(AC183496|pid:none) Brassica oleracea, *** SEQUENCING... 134 1e-41 AK151085_1(AK151085|pid:none) Mus musculus bone marrow macrophag... 139 2e-41 BT078127_1(BT078127|pid:none) Lepeophtheirus salmonis clone lsal... 139 2e-41 J02998_1(J02998|pid:none) Rat ras-related protein mRNA, clone NT... 140 3e-41 DQ214475_1(DQ214475|pid:none) Taeniopygia guttata clone 0058P004... 137 4e-41 BT077899_1(BT077899|pid:none) Lepeophtheirus salmonis clone lsal... 137 4e-41 AK129477_1(AK129477|pid:none) Mus musculus mRNA for mKIAA3012 pr... 137 6e-41 AF101310_4(AF101310|pid:none) Caenorhabditis elegans cosmid C39F... 141 6e-41 CR382124_213(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 141 6e-41 AF244545_1(AF244545|pid:none) Aspergillus awamori YptA (yptA) ge... 139 6e-41 BT077861_1(BT077861|pid:none) Lepeophtheirus salmonis clone lsal... 138 6e-41 BT076429_1(BT076429|pid:none) Caligus rogercresseyi clone crog-e... 140 7e-41 AJ278659_1(AJ278659|pid:none) Aspergillus niger srgB gene for a ... 139 7e-41 (Q9D1G1) RecName: Full=Ras-related protein Rab-1B; &AB232584_1(... 138 8e-41 (Q39571) RecName: Full=GTP-binding protein YPTC1; &DQ222936_1(D... 135 8e-41 AJ277108_1(AJ277108|pid:none) Trichoderma reesei ypt1 gene for s... 139 1e-40 D38625(D38625)GTP-binding protein o-rab1 - electric ray (Discopy... 140 1e-40 S06147(S06147;S03189)GTP-binding protein rab1B - rat 139 1e-40 (Q5RE13) RecName: Full=Ras-related protein Rab-1B; &(Q9H0U4) Re... 138 1e-40 CR533462_1(CR533462|pid:none) Homo sapiens full open reading fra... 138 1e-40 AK042020_1(AK042020|pid:none) Mus musculus 3 days neonate thymus... 137 1e-40 CR382130_329(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 138 2e-40 BT051367_1(BT051367|pid:none) Medicago truncatula clone MTYF1_F2... 134 2e-40 GN106077_1(GN106077|pid:none) Sequence 10858 from Patent WO20090... 134 2e-40 (Q2HJH2) RecName: Full=Ras-related protein Rab-1B; &BC105393_1(... 138 2e-40 AE017352_188(AE017352|pid:none) Cryptococcus neoformans var. neo... 142 2e-40 (P33723) RecName: Full=GTP-binding protein ypt1; &AL356324_15(A... 139 3e-40 GN106121_1(GN106121|pid:none) Sequence 10902 from Patent WO20090... 139 3e-40 EF146669_1(EF146669|pid:none) Populus trichocarpa clone WS01211_... 135 3e-40 AE014297_3082(AE014297|pid:none) Drosophila melanogaster chromos... 138 3e-40 (P10536) RecName: Full=Ras-related protein Rab-1B; &X13905_1(X1... 138 3e-40 Z73932_1(Z73932|pid:none) L.japonicus mRNA for small GTP-binding... 134 3e-40 EF086613_1(EF086613|pid:none) Picea sitchensis clone WS02920_I20... 133 4e-40 GN106013_1(GN106013|pid:none) Sequence 10794 from Patent WO20090... 134 4e-40 GN105983_1(GN105983|pid:none) Sequence 10764 from Patent WO20090... 134 5e-40 AC183493_34(AC183493|pid:none) Brassica oleracea Contig B, compl... 134 5e-40 GM977155_1(GM977155|pid:none) Sequence 63 from Patent WO20081456... 132 5e-40 GN105857_1(GN105857|pid:none) Sequence 10638 from Patent WO20090... 135 6e-40 Y08425_1(Y08425|pid:none) N.plumbaginifolia mRNA for small GTP-b... 135 6e-40 AM494964_85(AM494964|pid:none) Leishmania braziliensis chromosom... 128 6e-40 (P11620) RecName: Full=GTP-binding protein ypt1; &AL136536_10(A... 140 7e-40 D12548_1(D12548|pid:none) Pisum sativum mRNA for GTP-binding pro... 134 7e-40 AE016815_434(AE016815|pid:none) Ashbya gossypii (= Eremothecium ... 139 8e-40 DQ414556_1(DQ414556|pid:none) Suberites domuncula Rab1 gene, com... 135 8e-40 AJ810707_1(AJ810707|pid:none) Poa pratensis mRNA for RAB1-like (... 134 8e-40 AF013572_1(AF013572|pid:none) Bombyx mori small GTP-binding prot... 132 8e-40 AC140549_18(AC140549|pid:none) Medicago truncatula clone mth2-28... 133 1e-39 AP007162_533(AP007162|pid:none) Aspergillus oryzae RIB40 genomic... 139 1e-39 CP000497_244(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 138 1e-39 FM992688_325(FM992688|pid:none) Candida dubliniensis CD36 chromo... 138 1e-39 AF330211_1(AF330211|pid:none) Candida albicans small GTP-binding... 138 1e-39 AY060495_1(AY060495|pid:none) Arabidopsis thaliana AT4g17530/dl4... 132 1e-39 (P34139) RecName: Full=Ras-related protein Rab-1A; 137 2e-39 CU928171_789(CU928171|pid:none) Kluyveromyces thermotolerans str... 137 2e-39 BT070553_1(BT070553|pid:none) Picea sitchensis clone WS02735_N04... 137 2e-39 GM977161_1(GM977161|pid:none) Sequence 69 from Patent WO20081456... 135 2e-39 AC183498_22(AC183498|pid:none) Brassica oleracea, *** SEQUENCING... 134 3e-39 GN106103_1(GN106103|pid:none) Sequence 10884 from Patent WO20090... 127 3e-39 FN392321_231(FN392321|pid:none) Pichia pastoris GS115 chromosome... 139 3e-39 GN106155_1(GN106155|pid:none) Sequence 10936 from Patent WO20090... 134 3e-39 BT081293_1(BT081293|pid:none) Caligus clemensi clone ccle-evs-51... 133 3e-39 D12547_1(D12547|pid:none) Pisum sativum mRNA for GTP-binding pro... 130 3e-39 GM977167_1(GM977167|pid:none) Sequence 75 from Patent WO20081456... 127 3e-39 BT070586_1(BT070586|pid:none) Picea sitchensis clone WS02737_M21... 135 4e-39 EU284879_1(EU284879|pid:none) TSA: Elaeis guineensis EgEfMPOB000... 135 4e-39 GN105977_1(GN105977|pid:none) Sequence 10758 from Patent WO20090... 132 4e-39 L12031_1(L12031|pid:none) Leishmania major V121 GTP-binding prot... 126 4e-39 EF147099_1(EF147099|pid:none) Populus trichocarpa clone WS01227_... 129 4e-39 GN106117_1(GN106117|pid:none) Sequence 10898 from Patent WO20090... 134 5e-39 DQ397201_1(DQ397201|pid:none) Saccharum officinarum small GTP bi... 128 6e-39 GM977145_1(GM977145|pid:none) Sequence 53 from Patent WO20081456... 135 6e-39 (P40392) RecName: Full=Ras-related protein RIC1; &AK243597_1(AK... 135 6e-39 AF324990_1(AF324990|pid:none) Arabidopsis thaliana AT5g47200 (AT... 132 8e-39 GM977163_1(GM977163|pid:none) Sequence 71 from Patent WO20081456... 131 1e-38 EF144402_1(EF144402|pid:none) Populus trichocarpa clone PX0019_E... 135 1e-38 AF108883_1(AF108883|pid:none) Capsicum annuum small GTP-binding ... 134 1e-38 AK059888_1(AK059888|pid:none) Oryza sativa Japonica Group cDNA c... 134 1e-38 GN105859_1(GN105859|pid:none) Sequence 10640 from Patent WO20090... 134 1e-38 (Q92928) RecName: Full=Putative Ras-related protein Rab-1C; ... 131 1e-38 GN080089_1(GN080089|pid:none) Sequence 692 from Patent WO2009027... 134 1e-38 BT039522_1(BT039522|pid:none) Zea mays full-length cDNA clone ZM... 134 2e-38 AP008208_2028(AP008208|pid:none) Oryza sativa (japonica cultivar... 134 2e-38 S34253(S34253) GTP-binding protein, ras-related - common tobacco... 137 2e-38 AJ307662_21(AJ307662|pid:none) Oryza sativa genomic DNA fragment... 134 2e-38 GN105853_1(GN105853|pid:none) Sequence 10634 from Patent WO20090... 134 2e-38 (Q01890) RecName: Full=Ras-like GTP-binding protein YPT1; &JC53... 138 3e-38 GN106061_1(GN106061|pid:none) Sequence 10842 from Patent WO20090... 130 3e-38 GN106197_1(GN106197|pid:none) Sequence 10978 from Patent WO20090... 134 4e-38 GN106151_1(GN106151|pid:none) Sequence 10932 from Patent WO20090... 135 4e-38 BT034664_1(BT034664|pid:none) Zea mays full-length cDNA clone ZM... 134 4e-38 EF145603_1(EF145603|pid:none) Populus trichocarpa clone WS01126_... 135 5e-38 GM977157_1(GM977157|pid:none) Sequence 65 from Patent WO20081456... 134 5e-38 GN106059_1(GN106059|pid:none) Sequence 10840 from Patent WO20090... 133 5e-38 CS560194_1(CS560194|pid:none) Sequence 781 from Patent WO2006032... 134 6e-38 CS559708_1(CS559708|pid:none) Sequence 295 from Patent WO2006032... 134 6e-38 B86153(B86153) ARA-5 [imported] - Arabidopsis thaliana &U89959_... 134 8e-38 CP001323_241(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 133 8e-38 (P01123) RecName: Full=GTP-binding protein YPT1; AltName: Full=R... 133 9e-38 X00209_2(X00209|pid:none) Yeast YP2 gene The YP2 protein shows h... 133 9e-38 D01027_1(D01027|pid:none) Arabidopsis thaliana mRNA for small GT... 134 1e-37 D12549_1(D12549|pid:none) Pisum sativum mRNA for GTP-binding pro... 133 1e-37 GN106111_1(GN106111|pid:none) Sequence 10892 from Patent WO20090... 130 1e-37 DQ372931_1(DQ372931|pid:none) Pinus pinaster Rab1 mRNA, complete... 130 1e-37 AC159407_36(AC159407|pid:none) Trypanosoma brucei chromosome 8 c... 130 2e-37 CR380957_540(CR380957|pid:none) Candida glabrata strain CBS138 c... 133 2e-37 AC104285_6(AC104285|pid:none) Oryza sativa (japonica cultivar-gr... 135 2e-37 GN106165_1(GN106165|pid:none) Sequence 10946 from Patent WO20090... 133 2e-37 EF091876_1(EF091876|pid:none) Solanum tuberosum ras-related GTP ... 133 3e-37 GM977149_1(GM977149|pid:none) Sequence 57 from Patent WO20081456... 134 4e-37 AY321327_1(AY321327|pid:none) Rattus norvegicus Ac2-048 mRNA, co... 124 4e-37 Z73931_1(Z73931|pid:none) L.japonicus mRNA for small GTP-binding... 130 5e-37 BT071594_1(BT071594|pid:none) Picea sitchensis clone WS02926_J12... 129 7e-37 CP000587_71(CP000587|pid:none) Ostreococcus lucimarinus CCE9901 ... 126 7e-37 EU069503_1(EU069503|pid:none) Gymnochlora stellata Rab1B mRNA, c... 130 7e-37 BC150404_1(BC150404|pid:none) Danio rerio zgc:171927, mRNA (cDNA... 136 9e-37 BT052509_1(BT052509|pid:none) Medicago truncatula clone MTYFD_FE... 132 9e-37 GN105981_1(GN105981|pid:none) Sequence 10762 from Patent WO20090... 128 3e-36 GN080095_1(GN080095|pid:none) Sequence 698 from Patent WO2009027... 132 1e-35 GN080135_1(GN080135|pid:none) Sequence 738 from Patent WO2009027... 132 1e-35 L48181_1(L48181|pid:none) Brassica campestris L. pekinensis ypt-... 127 2e-35 (Q9ZRE2) RecName: Full=Ras-related protein RABD1; AltName: Full=... 127 2e-35 FN357538_13(FN357538|pid:none) Schistosoma mansoni genome sequen... 126 2e-35 DQ393575_1(DQ393575|pid:none) Metarhizium anisopliae RAB/GTPase ... 120 3e-34 AY223134_1(AY223134|pid:none) Schistosoma japonicum SJCHGC02833 ... 130 3e-34 AB241242_1(AB241242|pid:none) Symbiotic protist of Reticuliterme... 122 5e-34 AB054578_1(AB054578|pid:none) Entamoeba histolytica EhRab1A mRNA... 127 7e-34 FN320591_1(FN320591|pid:none) Schistosoma japonicum isolate Anhu... 130 7e-34 AB241243_1(AB241243|pid:none) Symbiotic protist of Reticuliterme... 127 2e-33 FN359283_3(FN359283|pid:none) Schistosoma mansoni genome sequenc... 125 1e-32 CR954205_238(CR954205|pid:none) Ostreococcus tauri strain OTTH05... 115 2e-32 CR932686_1(CR932686|pid:none) Paramecium tetraurelia, Small GTPa... 124 2e-32 AB241241_1(AB241241|pid:none) Symbiotic protist of Reticuliterme... 121 2e-32 AF542024_1(AF542024|pid:none) Griffithsia japonica GTP-binding p... 134 2e-32 (P34141) RecName: Full=Ras-related protein RabA; 121 3e-32 L21011_1(L21011|pid:none) Dictyostelium discoideum RabA mRNA, 3'... 121 3e-32 FN315276_1(FN315276|pid:none) Schistosoma japonicum isolate Anhu... 123 3e-32 (P20790) RecName: Full=Ras-related protein Rab-8A; AltName: Full... 115 3e-32 AY324134_1(AY324134|pid:none) Babesia bovis Rab1a mRNA, complete... 121 1e-31 AC183495_42(AC183495|pid:none) Brassica oleracea Contig A, compl... 106 1e-31 AF389109_1(AF389109|pid:none) Entamoeba histolytica small GTP-bi... 112 2e-31 AM910992_200(AM910992|pid:none) Plasmodium knowlesi strain H chr... 124 2e-31 AY232027_1(AY232027|pid:none) Drosophila yakuba clone yak-ad_Rab... 138 2e-31 DQ286060_1(DQ286060|pid:none) Hydra vulgaris RAS related GTP-bin... 121 3e-31 (P20791) RecName: Full=Ras-related protein Rab-8B; AltName: Full... 112 3e-31 CR933412_1(CR933412|pid:none) Paramecium tetraurelia, Small GTPa... 122 5e-31 CR933446_1(CR933446|pid:none) Paramecium tetraurelia, Small GTPa... 122 6e-31 AC139707_26(AC139707|pid:none) Medicago truncatula clone mth2-16... 122 6e-31 BT076103_1(BT076103|pid:none) Caligus rogercresseyi clone crog-e... 112 8e-31 AL162751_30(AL162751|pid:none) Arabidopsis thaliana DNA chromoso... 120 8e-31 EF144772_1(EF144772|pid:none) Populus trichocarpa clone WS01118_... 120 8e-31 AB015475_6(AB015475|pid:none) Arabidopsis thaliana genomic DNA, ... 119 8e-31 BT070448_1(BT070448|pid:none) Picea sitchensis clone WS0272_O15 ... 115 1e-30 AY231907_1(AY231907|pid:none) Drosophila yakuba clone yak-em_Rab... 135 1e-30 DQ414563_1(DQ414563|pid:none) Suberites domuncula Rab10 gene, co... 117 1e-30 AY087058_1(AY087058|pid:none) Arabidopsis thaliana clone 3115 mR... 119 1e-30 GN106091_1(GN106091|pid:none) Sequence 10872 from Patent WO20090... 119 1e-30 GN106033_1(GN106033|pid:none) Sequence 10814 from Patent WO20090... 119 1e-30 S57478(S57478) GTP-binding protein GTP13 - garden pea &Z49902_1... 119 1e-30 CR932510_1(CR932510|pid:none) Paramecium tetraurelia, Small GTPa... 117 1e-30 GN105821_1(GN105821|pid:none) Sequence 10602 from Patent WO20090... 117 1e-30 DQ414573_1(DQ414573|pid:none) Suberites domuncula Rab35 gene, co... 121 2e-30 AB079020_1(AB079020|pid:none) Nicotiana tabacum mRNA for ras-rel... 119 2e-30 AC125368_16(AC125368|pid:none) Medicago truncatula clone mth2-13... 119 2e-30 CR932639_1(CR932639|pid:none) Paramecium tetraurelia, Small GTPa... 116 2e-30 DQ440351_1(DQ440351|pid:none) Aedes aegypti clone AET-452 RAB pr... 120 2e-30 DQ222937_1(DQ222937|pid:none) Chlamydomonas incerta YptC1 (yptC1... 107 2e-30 (O76173) RecName: Full=Ras-related protein Rab-1C; &AB015237_1(... 115 2e-30 AB241220_1(AB241220|pid:none) Pyrsonympha grandis RsSmRab1_1 mRN... 120 2e-30 (Q9TVU5) RecName: Full=Ras-related protein Rab-1; AltName: Full=... 124 2e-30 AB241230_1(AB241230|pid:none) Dinenympha exilis RsSmRab1_2 mRNA ... 121 2e-30 BC103436_1(BC103436|pid:none) Bos taurus RAB1A, member RAS oncog... 101 3e-30 (Q504M8) RecName: Full=Ras-related protein Rab-26; &AB232621_1(... 115 3e-30 GM977153_1(GM977153|pid:none) Sequence 61 from Patent WO20081456... 119 3e-30 AE017343_437(AE017343|pid:none) Cryptococcus neoformans var. neo... 120 3e-30 CR932696_1(CR932696|pid:none) Paramecium tetraurelia, Small GTPa... 116 3e-30 GN106009_1(GN106009|pid:none) Sequence 10790 from Patent WO20090... 119 4e-30 AY896243_1(AY896243|pid:none) Trichomonas vaginalis strain G3 sm... 120 4e-30 EU960755_1(EU960755|pid:none) Zea mays clone 228324 unknown mRNA. 134 4e-30 BT070243_1(BT070243|pid:none) Picea sitchensis clone WS02711_M12... 119 5e-30 GM977111_1(GM977111|pid:none) Sequence 19 from Patent WO20081456... 119 5e-30 AY576526_1(AY576526|pid:none) Oryza sativa (japonica cultivar-gr... 118 5e-30 BC060015_1(BC060015|pid:none) Xenopus laevis hypothetical protei... 112 6e-30 AC117265_12(AC117265|pid:none) Oryza sativa (japonica cultivar-g... 119 7e-30 GN105943_1(GN105943|pid:none) Sequence 10724 from Patent WO20090... 119 7e-30 GN106127_1(GN106127|pid:none) Sequence 10908 from Patent WO20090... 117 7e-30 GN106051_1(GN106051|pid:none) Sequence 10832 from Patent WO20090... 117 7e-30 BT035355_1(BT035355|pid:none) Zea mays full-length cDNA clone ZM... 116 7e-30 GN106011_1(GN106011|pid:none) Sequence 10792 from Patent WO20090... 119 7e-30 GN106049_1(GN106049|pid:none) Sequence 10830 from Patent WO20090... 117 7e-30 AY439005_1(AY439005|pid:none) Fucus distichus Rab family GTPase ... 120 7e-30 AJ278658_1(AJ278658|pid:none) Aspergillus niger srgA gene for a ... 115 7e-30 S51495(S51495;S70850)GTP-binding protein RYL1 - yeast (Yarrowia ... 114 7e-30 S33900(S33900;JQ2233) GTP-binding protein ypt2 - tomato &X69980... 117 9e-30 AB079024_1(AB079024|pid:none) Nicotiana tabacum mRNA for ras-rel... 116 9e-30 Z73946_1(Z73946|pid:none) L.japonicus mRNA for small GTP-binding... 116 9e-30 GN106021_1(GN106021|pid:none) Sequence 10802 from Patent WO20090... 115 1e-29 S57474(S57474) GTP-binding protein - garden pea &Z49899_1(Z4989... 116 1e-29 BC077124_1(BC077124|pid:none) Danio rerio zgc:100812, mRNA (cDNA... 117 1e-29 BC066913_1(BC066913|pid:none) Homo sapiens RAB26, member RAS onc... 113 1e-29 AK104346_1(AK104346|pid:none) Oryza sativa Japonica Group cDNA c... 118 2e-29 BC124978_1(BC124978|pid:none) Xenopus laevis hypothetical protei... 118 2e-29 (P24409) RecName: Full=Ras-related protein Rab-10; &D36364(D363... 112 2e-29 CR859178_1(CR859178|pid:none) Pongo abelii mRNA; cDNA DKFZp459K2... 112 2e-29 AL136650_1(AL136650|pid:none) Homo sapiens mRNA; cDNA DKFZp564L1... 112 2e-29 (P61026) RecName: Full=Ras-related protein Rab-10; &(P61027) Re... 112 2e-29 AK008725_1(AK008725|pid:none) Mus musculus adult male stomach cD... 112 2e-29 AL117202_29(AL117202|pid:none) Caenorhabditis elegans YAC Y47D3A... 124 3e-29 BT080552_1(BT080552|pid:none) Caligus clemensi clone ccle-evs-51... 113 3e-29 BT081291_1(BT081291|pid:none) Caligus clemensi clone ccle-evs-51... 113 3e-29 BT044760_1(BT044760|pid:none) Salmo salar clone ssal-rgf-502-322... 112 3e-29 (Q9ULW5) RecName: Full=Ras-related protein Rab-26; &AY646153_1(... 113 3e-29 AF096249_1(AF096249|pid:none) Lycopersicon esculentum ethylene-r... 116 3e-29 BC061274_1(BC061274|pid:none) Xenopus tropicalis hypothetical pr... 119 3e-29 EF145933_1(EF145933|pid:none) Populus trichocarpa clone WS0114_G... 107 4e-29 T33855(T33855)hypothetical protein D1037.4 - Caenorhabditis eleg... 115 5e-29 AB112929_1(AB112929|pid:none) Caenorhabditis elegans rab8 mRNA f... 115 5e-29 (P22127) RecName: Full=Ras-related protein Rab-10; Shor... 112 5e-29 BC129421_1(BC129421|pid:none) Danio rerio zgc:158741, mRNA (cDNA... 112 5e-29 GM977141_1(GM977141|pid:none) Sequence 49 from Patent WO20081456... 115 6e-29 AB197097_1(AB197097|pid:none) Entamoeba histolytica gene for sma... 108 6e-29 AB232608_1(AB232608|pid:none) Mus musculus mRNA for Rab13, compl... 120 7e-29 (Q9DD03) RecName: Full=Ras-related protein Rab-13; &AK002303_1(... 120 7e-29 AY893660_1(AY893660|pid:none) Synthetic construct Homo sapiens c... 119 7e-29 FN357316_32(FN357316|pid:none) Schistosoma mansoni genome sequen... 115 1e-28 BX538352_67(BX538352|pid:none) Cryptosporidium parvum chromosome... 115 1e-28 AB197057_1(AB197057|pid:none) Entamoeba histolytica gene for sma... 104 1e-28 (P07560) RecName: Full=Ras-related protein SEC4; AltName: Full=S... 112 1e-28 AY813938_1(AY813938|pid:none) Schistosoma japonicum SJCHGC06150 ... 116 1e-28 AC116984_79(AC116984|pid:none) Dictyostelium discoideum chromoso... 109 2e-28 EU954271_1(EU954271|pid:none) Zea mays clone 1460642 ras-related... 107 2e-28 (Q558I0) RecName: Full=Ras-related protein RabF1; 109 2e-28 BC134059_1(BC134059|pid:none) Danio rerio RAB8A, member RAS onco... 115 2e-28 BT023070_1(BT023070|pid:none) Drosophila melanogaster IP08619 fu... 115 2e-28 (Q96AX2) RecName: Full=Ras-related protein Rab-37; &AK098068_1(... 105 3e-28 (Q39572) RecName: Full=Ras-related protein YPTC6; &JC4108(JC410... 110 3e-28 AK296062_1(AK296062|pid:none) Homo sapiens cDNA FLJ61124 complet... 105 3e-28 CR762386_2(CR762386|pid:none) Zebrafish DNA sequence from clone ... 110 3e-28 EF125738_1(EF125738|pid:none) Nyctotherus ovalis Rab A61 gene, c... 121 3e-28 AF127669_1(AF127669|pid:none) Mus musculus small GTPase (Rab11a)... 111 4e-28 BC081187_1(BC081187|pid:none) Xenopus laevis MGC84419 protein, m... 111 4e-28 CR933429_1(CR933429|pid:none) Paramecium tetraurelia, Small GTPa... 110 4e-28 AB018117_6(AB018117|pid:none) Arabidopsis thaliana genomic DNA, ... 96 4e-28 DQ414564_1(DQ414564|pid:none) Suberites domuncula Rab11 gene, co... 111 4e-28 EU069500_1(EU069500|pid:none) Karlodinium micrum Rab1D mRNA, com... 116 5e-28 U18771_1(U18771|pid:none) Rattus norvegicus Rab26 mRNA, complete... 110 5e-28 CR932504_1(CR932504|pid:none) Paramecium tetraurelia, Small GTPa... 115 6e-28 AC140549_17(AC140549|pid:none) Medicago truncatula clone mth2-28... 107 6e-28 AM910992_188(AM910992|pid:none) Plasmodium knowlesi strain H chr... 112 6e-28 CR932581_1(CR932581|pid:none) Paramecium tetraurelia, Small GTPa... 116 8e-28 AY894025_1(AY894025|pid:none) Synthetic construct Homo sapiens c... 111 8e-28 (Q2TA29) RecName: Full=Ras-related protein Rab-11A; &BC111143_1... 111 8e-28 AJ851582_1(AJ851582|pid:none) Gallus gallus mRNA for hypothetica... 111 8e-28 BC082421_1(BC082421|pid:none) Xenopus laevis hypothetical LOC494... 111 8e-28 EU244432_1(EU244432|pid:none) Capra hircus RAB11B (rab11b) mRNA,... 111 8e-28 EF560724_1(EF560724|pid:none) Homo sapiens clone DKFZp564C1023 R... 111 8e-28 (P46638) RecName: Full=Ras-related protein Rab-11B; &A55005(A55... 111 8e-28 (P22129) RecName: Full=Ras-related protein Rab-11B; AltName: Ful... 111 8e-28 BC152630_1(BC152630|pid:none) Danio rerio zgc:92772, mRNA (cDNA ... 111 8e-28 CR541691_1(CR541691|pid:none) Homo sapiens full open reading fra... 111 8e-28 BC076247_1(BC076247|pid:none) Danio rerio zgc:92772, mRNA (cDNA ... 111 8e-28 (O35509) RecName: Full=Ras-related protein Rab-11B; &(Q15907) R... 111 8e-28 AJ851375_1(AJ851375|pid:none) Gallus gallus mRNA for hypothetica... 119 8e-28 BT080187_1(BT080187|pid:none) Caligus clemensi clone ccle-evs-50... 108 9e-28 AC023628_1(AC023628|pid:none) Arabidopsis thaliana chromosome I ... 115 1e-27 JC2487(JC2487) GTP-binding protein H-YPT3 - human &X79780_1(X79... 111 1e-27 AB035354_1(AB035354|pid:none) Drosophila melanogaster mRNA for D... 111 1e-27 BT056265_1(BT056265|pid:none) Drosophila melanogaster FI09227 fu... 111 1e-27 JC2528(JC2528)GTP-binding protein Rab26 - rat 108 1e-27 BC057747_1(BC057747|pid:none) Xenopus laevis hypothetical protei... 119 1e-27 BT049157_1(BT049157|pid:none) Salmo salar clone ssal-rgb2-591-24... 111 1e-27 BC048889_1(BC048889|pid:none) Danio rerio RAB11B, member RAS onc... 110 1e-27 BT001785_1(BT001785|pid:none) Drosophila melanogaster RH21315 fu... 111 1e-27 AB027137_1(AB027137|pid:none) Homo sapiens v46133 mRNA for RAB-2... 107 1e-27 AE014296_1491(AE014296|pid:none) Drosophila melanogaster chromos... 110 1e-27 BC068969_1(BC068969|pid:none) Xenopus laevis similar to RAB35, m... 119 2e-27 BC099268_1(BC099268|pid:none) Xenopus laevis similar to RAB35, m... 119 2e-27 BC041759_1(BC041759|pid:none) Xenopus laevis similar to RAB35, m... 119 2e-27 BT078096_1(BT078096|pid:none) Lepeophtheirus salmonis clone lsal... 115 2e-27 BC087498_1(BC087498|pid:none) Xenopus laevis hypothetical LOC496... 111 2e-27 AY220456_1(AY220456|pid:none) Limulus polyphemus rab11-2 mRNA, c... 111 2e-27 BC075268_1(BC075268|pid:none) Xenopus tropicalis RAB11B, member ... 111 2e-27 CR536494_1(CR536494|pid:none) Homo sapiens full open reading fra... 111 2e-27 AJ237914_1(AJ237914|pid:none) Plasmodium falciparum putative rab... 116 2e-27 AF201953_1(AF201953|pid:none) Plasmodium falciparum isolate FCC1... 116 2e-27 DQ157704_1(DQ157704|pid:none) Aiptasia pulchella Rab11 protein m... 111 2e-27 BC041250_1(BC041250|pid:none) Xenopus laevis RAB11B, member RAS ... 110 2e-27 AK046260_1(AK046260|pid:none) Mus musculus adult male corpora qu... 103 2e-27 EF678326_1(EF678326|pid:none) Picea sitchensis clone WS02914_M23... 109 2e-27 AF003139_1(AF003139|pid:none) Caenorhabditis elegans cosmid F53G... 109 2e-27 EU069501_1(EU069501|pid:none) Gymnochlora stellata Rab1A1 mRNA, ... 112 2e-27 CR382138_325(CR382138|pid:none) Debaryomyces hansenii strain CBS... 107 3e-27 AY896281_1(AY896281|pid:none) Trichomonas vaginalis strain G3 sm... 109 3e-27 AF014120_1(AF014120|pid:none) Strongylocentrotus purpuratus GTP-... 106 3e-27 BT077510_1(BT077510|pid:none) Lepeophtheirus salmonis clone lsal... 110 4e-27 U41269_1(U41269|pid:none) Plasmodium falciparum Rab1 protein (Pf... 116 5e-27 AY220749_1(AY220749|pid:none) Limulus polyphemus Rab11-1a mRNA, ... 111 6e-27 AB006189_1(AB006189|pid:none) Drosophila melanogaster mRNA for R... 112 6e-27 AB076904_1(AB076904|pid:none) Ciona intestinalis Ci-rab2 mRNA fo... 105 7e-27 AY220748_1(AY220748|pid:none) Limulus polyphemus Rab11-1c mRNA, ... 111 8e-27 BC055141_1(BC055141|pid:none) Danio rerio zgc:63565, mRNA (cDNA ... 109 8e-27 (Q8K386) RecName: Full=Ras-related protein Rab-15; &AB232610_1(... 112 8e-27 (P59190) RecName: Full=Ras-related protein Rab-15; &AX399903_1(... 112 8e-27 (P35289) RecName: Full=Ras-related protein Rab-15; &BC094954_1(... 112 8e-27 (P28187) RecName: Full=Ras-related protein ARA-4; &AC004450_5(A... 111 9e-27 (Q550H6) RecName: Full=Ras-related protein Rab-11C; 110 1e-26 EF085830_1(EF085830|pid:none) Picea sitchensis clone WS0286_P20 ... 105 1e-26 EF083999_1(EF083999|pid:none) Picea sitchensis clone WS0281_E05 ... 103 1e-26 (P35281) RecName: Full=Ras-related protein Rab-10; &M83677_1(M8... 112 1e-26 (Q39570) RecName: Full=GTP-binding protein YPTC4; &JC4106(JC410... 103 2e-26 AY904354_1(AY904354|pid:none) Gracilariopsis lemaneiformis small... 101 2e-26 EU244427_1(EU244427|pid:none) Capra hircus RAB1A-like protein mR... 122 2e-26 CR382125_525(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 112 2e-26 CR933456_1(CR933456|pid:none) Paramecium tetraurelia, Small GTPa... 107 2e-26 BT045814_1(BT045814|pid:none) Salmo salar clone ssal-rgf-532-060... 109 2e-26 AE014297_3785(AE014297|pid:none) Drosophila melanogaster chromos... 110 2e-26 AM269968_23(AM269968|pid:none) Aspergillus niger contig An01c021... 108 2e-26 BX649327_6(BX649327|pid:none) Zebrafish DNA sequence from clone ... 106 2e-26 BT051415_1(BT051415|pid:none) Medicago truncatula clone MTYF1_F2... 105 3e-26 L35845_1(L35845|pid:none) Oryza sativa small GTP-binding protein... 102 3e-26 DQ525204_1(DQ525204|pid:none) Bombyx mori ras-related GTP-bindin... 103 3e-26 AL161545_36(AL161545|pid:none) Arabidopsis thaliana DNA chromoso... 102 3e-26 CR932657_1(CR932657|pid:none) Paramecium tetraurelia, Small GTPa... 110 3e-26 EU958646_1(EU958646|pid:none) Zea mays clone 1707478 ras-related... 111 3e-26 AC130603_13(AC130603|pid:none) Oryza sativa (japonica cultivar-g... 111 3e-26 EU810302_1(EU810302|pid:none) Gymnochlora stellata Ras-related s... 99 3e-26 DQ019037_1(DQ019037|pid:none) Trichomonas vaginalis strain G3 sm... 110 3e-26 D12542_1(D12542|pid:none) Pisum sativum mRNA for GTP-binding pro... 105 3e-26 (P25228) RecName: Full=Ras-related protein Rab-3; &AB112932_1(A... 103 3e-26 CP000499_197(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 108 3e-26 (P25766) RecName: Full=Ras-related protein RGP1; AltName: Full=G... 104 4e-26 AC069472_3(AC069472|pid:none) Arabidopsis thaliana chromosome 3 ... 105 4e-26 BT064760_1(BT064760|pid:none) Zea mays full-length cDNA clone ZM... 114 4e-26 CR932534_1(CR932534|pid:none) Paramecium tetraurelia, Small GTPa... 105 4e-26 AY099331_1(AY099331|pid:none) Periplaneta americana Rab11 mRNA, ... 105 4e-26 (Q40191) RecName: Full=Ras-related protein Rab11A; &Z73949_1(Z7... 105 4e-26 L49400_1(L49400|pid:none) Loligo pealii Rab3 gene, complete cds. 103 4e-26 AY815497_1(AY815497|pid:none) Schistosoma japonicum SJCHGC05511 ... 108 4e-26 AY552054_1(AY552054|pid:none) Aedes aegypti RAB-like GTP binding... 120 5e-26 D12541_1(D12541|pid:none) Pisum sativum mRNA for GTP-binding pro... 109 5e-26 FN357326_31(FN357326|pid:none) Schistosoma mansoni genome sequen... 117 5e-26 AY893729_1(AY893729|pid:none) Synthetic construct Homo sapiens c... 120 6e-26 GM977117_1(GM977117|pid:none) Sequence 25 from Patent WO20081456... 120 6e-26 (Q5KTJ6) RecName: Full=Ras-related protein Rab-13; &AB158369_1(... 120 6e-26 BC094846_1(BC094846|pid:none) Homo sapiens RAB13, member RAS onc... 120 6e-26 (P51153) RecName: Full=Ras-related protein Rab-13; AltName: Full... 120 6e-26 CR932579_1(CR932579|pid:none) Paramecium tetraurelia, Small GTPa... 104 7e-26 (Q39222) RecName: Full=Ras-related protein RABA1b; AltName: Full... 108 7e-26 AE014298_1101(AE014298|pid:none) Drosophila melanogaster chromos... 100 7e-26 AY071340_1(AY071340|pid:none) Drosophila melanogaster RE37651 fu... 100 7e-26 (Q39434) RecName: Full=Ras-related protein Rab2BV; &T14566(T145... 105 7e-26 AE013599_198(AE013599|pid:none) Drosophila melanogaster chromoso... 104 7e-26 AB035352_1(AB035352|pid:none) Drosophila melanogaster mRNA for D... 104 7e-26 EF710656_1(EF710656|pid:none) Glyptapanteles indiensis clone BAC... 104 7e-26 (O14462) RecName: Full=Ras-related protein SEC4; &AF015306_1(AF... 107 7e-26 AM920437_2206(AM920437|pid:none) Penicillium chrysogenum Wiscons... 108 7e-26 AY809861_1(AY809861|pid:none) Schistosoma japonicum SJCHGC02927 ... 118 7e-26 AK297498_1(AK297498|pid:none) Homo sapiens cDNA FLJ61134 complet... 111 7e-26 BC009227_1(BC009227|pid:none) Homo sapiens RAB13, member RAS onc... 119 8e-26 AP008213_447(AP008213|pid:none) Oryza sativa (japonica cultivar-... 105 9e-26 (Q01111) RecName: Full=Ras-related protein YPT3; &S23523(S23523... 109 9e-26 AM471469_2(AM471469|pid:none) Vitis vinifera contig VV78X014719.... 108 9e-26 AB016890_5(AB016890|pid:none) Arabidopsis thaliana genomic DNA, ... 106 9e-26 EU162609_23(EU162609|pid:none) Cleome spinosa clone contig83 BAC... 105 9e-26 (Q05975) RecName: Full=Ras-related protein Rab-2; &S38341(S3834... 104 9e-26 CR933420_1(CR933420|pid:none) Paramecium tetraurelia, Small GTPa... 103 9e-26 EU090128_1(EU090128|pid:none) Aiptasia pulchella Rab3 mRNA, comp... 101 1e-25 EF144593_1(EF144593|pid:none) Populus trichocarpa clone WS01111_... 103 1e-25 CP000582_359(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 101 1e-25 BT051484_1(BT051484|pid:none) Medicago truncatula clone MTYF1_F2... 119 1e-25 AK060095_1(AK060095|pid:none) Oryza sativa Japonica Group cDNA c... 107 1e-25 U00986_1(U00986|pid:none) Aplysia californica Rab3 mRNA, complet... 100 1e-25 FN314406_1(FN314406|pid:none) Schistosoma japonicum isolate Anhu... 103 1e-25 AJ518934_1(AJ518934|pid:none) Hordeum vulgare subsp. vulgare mRN... 102 1e-25 (P49104) RecName: Full=Ras-related protein Rab-2-B; &BT068076_1... 102 1e-25 DQ397202_1(DQ397202|pid:none) Saccharum officinarum small GTP bi... 102 1e-25 AF083256_1(AF083256|pid:none) Sporobolus stapfianus small GTP bi... 102 1e-25 AK304620_1(AK304620|pid:none) Homo sapiens cDNA FLJ57783 complet... 119 1e-25 AJ272025_1(AJ272025|pid:none) Colletotrichum lindemuthianum pt1 ... 119 1e-25 (Q58DS5) RecName: Full=Ras-related protein Rab-13; &BT021522_1(... 119 1e-25 BT035582_1(BT035582|pid:none) Zea mays full-length cDNA clone ZM... 109 2e-25 AK102491_1(AK102491|pid:none) Oryza sativa Japonica Group cDNA c... 108 2e-25 T28972(T28972)hypothetical protein T23H2.6 - Caenorhabditis eleg... 112 2e-25 BT038097_1(BT038097|pid:none) Zea mays full-length cDNA clone ZM... 107 2e-25 (Q40723) RecName: Full=Ras-related protein RGP2; AltName: Full=G... 105 2e-25 AC093018_9(AC093018|pid:none) Oryza sativa chromosome 3 BAC OSJN... 105 2e-25 AC090485_17(AC090485|pid:none) Genomic Sequence for Oryza sativa... 111 2e-25 T28971(T28971) hypothetical protein T23H2.5 - Caenorhabditis ele... 112 2e-25 AC161399_25(AC161399|pid:none) Medicago truncatula chromosome 2 ... 102 2e-25 AJ001367_1(AJ001367|pid:none) Daucus carota mRNA for Rab8-like s... 118 2e-25 AB197096_1(AB197096|pid:none) Entamoeba histolytica gene for sma... 107 2e-25 AC084818_20(AC084818|pid:none) Oryza sativa (japonica cultivar-g... 101 2e-25 (P36409) RecName: Full=Ras-related protein Rab-2A; 101 2e-25 AK051218_1(AK051218|pid:none) Mus musculus 12 days embryo spinal... 115 2e-25 AY815772_1(AY815772|pid:none) Schistosoma japonicum SJCHGC09130 ... 103 2e-25 (A4D1S5) RecName: Full=Ras-related protein Rab-19; &BC140796_1(... 110 2e-25 FN314407_1(FN314407|pid:none) Schistosoma japonicum isolate Anhu... 103 2e-25 AJ308736_1(AJ308736|pid:none) Plasmodium falciparum mRNA for put... 98 2e-25 (P61019) RecName: Full=Ras-related protein Rab-2A; &(P61105) Re... 103 2e-25 (Q90965) RecName: Full=Ras-related protein Rab-2A; &S52325(S523... 103 2e-25 BT043649_1(BT043649|pid:none) Salmo salar clone HM5_0924 RAB2A, ... 103 2e-25 (P53994) RecName: Full=Ras-related protein Rab-2A; &AB232585_1(... 103 2e-25 Z73937_1(Z73937|pid:none) L.japonicus mRNA for small GTP-binding... 102 2e-25 AL161545_37(AL161545|pid:none) Arabidopsis thaliana DNA chromoso... 102 2e-25 E71440(E71440)GTP-binding protein RAB2A - Arabidopsis thaliana 102 2e-25 CR932630_1(CR932630|pid:none) Paramecium tetraurelia, Small GTPa... 112 3e-25 EU951907_1(EU951907|pid:none) Zea mays clone 1062297 ras-related... 100 3e-25 GN080113_1(GN080113|pid:none) Sequence 716 from Patent WO2009027... 111 3e-25 AL670003_2(AL670003|pid:none) Neurospora crassa DNA linkage grou... 107 3e-25 BT033192_1(BT033192|pid:none) Zea mays full-length cDNA clone ZM... 105 3e-25 (Q54GY8) RecName: Full=Ras-related protein Rab-18; 112 3e-25 AF363067_1(AF363067|pid:none) Entamoeba histolytica small GTP-bi... 112 3e-25 BC159385_1(BC159385|pid:none) Xenopus tropicalis hypothetical pr... 112 3e-25 BT006190_1(BT006190|pid:none) Arabidopsis thaliana clone C00163 ... 106 3e-25 (P19892) RecName: Full=Ras-related protein ARA-1; &AC009999_8(A... 106 3e-25 EF084887_1(EF084887|pid:none) Picea sitchensis clone WS0292_K24 ... 100 3e-25 BC122421_1(BC122421|pid:none) Danio rerio zgc:153788, mRNA (cDNA... 107 3e-25 BX647601_1(BX647601|pid:none) Homo sapiens mRNA; cDNA DKFZp313C1... 101 3e-25 AF532625_1(AF532625|pid:none) Glycine max GTP-binding protein mR... 108 3e-25 GN080103_1(GN080103|pid:none) Sequence 706 from Patent WO2009027... 105 3e-25 BT037150_1(BT037150|pid:none) Zea mays full-length cDNA clone ZM... 105 3e-25 BC058341_1(BC058341|pid:none) Danio rerio RAB14, member RAS onco... 97 3e-25 AY069563_1(AY069563|pid:none) Drosophila melanogaster LD29476 fu... 94 3e-25 CR932703_1(CR932703|pid:none) Paramecium tetraurelia, Small GTPa... 108 3e-25 BC071068_1(BC071068|pid:none) Xenopus laevis MGC78967 protein, m... 100 4e-25 AY851657_1(AY851657|pid:none) Triticum aestivum small GTP-bindin... 102 4e-25 S71559(S71559) GTP-binding protein rab2 - soybean &U32185_1(U32... 102 4e-25 BT037824_1(BT037824|pid:none) Zea mays full-length cDNA clone ZM... 101 4e-25 T23530(T23530) hypothetical protein K09A9.2 - Caenorhabditis ele... 96 4e-25 AJ245570_1(AJ245570|pid:none) Lycopersicon esculentum mRNA for R... 108 4e-25 (Q40195) RecName: Full=Ras-related protein Rab11E; &Z73953_1(Z7... 108 4e-25 AC138015_11(AC138015|pid:none) Medicago truncatula clone mth2-34... 107 4e-25 AC124143_12(AC124143|pid:none) Oryza sativa (japonica cultivar-g... 107 4e-25 BT039216_1(BT039216|pid:none) Zea mays full-length cDNA clone ZM... 107 4e-25 (Q40193) RecName: Full=Ras-related protein Rab11C; &Z73951_1(Z7... 105 4e-25 (P36412) RecName: Full=Ras-related protein Rab-11A; &U02925_1(U... 102 4e-25 CU638743_340(CU638743|pid:none) Podospora anserina genomic DNA c... 108 4e-25 BC086715_1(BC086715|pid:none) Danio rerio RAB25, member RAS onco... 104 4e-25 BX890617_2(BX890617|pid:none) Zebrafish DNA sequence from clone ... 104 4e-25 AF169950_1(AF169950|pid:none) Tetrahymena thermophila putative i... 102 4e-25 CR932610_1(CR932610|pid:none) Paramecium tetraurelia, Small GTPa... 106 4e-25 AM432734_2(AM432734|pid:none) Vitis vinifera contig VV78X219500.... 107 5e-25 AC159435_18(AC159435|pid:none) Trypanosoma brucei chromosome 8 c... 103 5e-25 BT037200_1(BT037200|pid:none) Zea mays full-length cDNA clone ZM... 101 5e-25 AY891305_1(AY891305|pid:none) Synthetic construct Homo sapiens c... 102 5e-25 (P49103) RecName: Full=Ras-related protein Rab-2-A; &T02242(T02... 100 5e-25 FN357335_32(FN357335|pid:none) Schistosoma mansoni genome sequen... 99 5e-25 Z73950_1(Z73950|pid:none) L.japonicus mRNA for small GTP-binding... 101 6e-25 GN080127_1(GN080127|pid:none) Sequence 730 from Patent WO2009027... 111 6e-25 GN080133_1(GN080133|pid:none) Sequence 736 from Patent WO2009027... 111 6e-25 GN106149_1(GN106149|pid:none) Sequence 10930 from Patent WO20090... 106 6e-25 GN106097_1(GN106097|pid:none) Sequence 10878 from Patent WO20090... 109 6e-25 AB241229_1(AB241229|pid:none) Pyrsonympha grandis RsSmRab11_1 mR... 103 6e-25 BC054719_1(BC054719|pid:none) Mus musculus RAB2B, member RAS onc... 101 6e-25 AY891536_1(AY891536|pid:none) Synthetic construct Homo sapiens c... 100 6e-25 (O95716) RecName: Full=Ras-related protein Rab-3D; &AF081353_1(... 100 6e-25 (P59279) RecName: Full=Ras-related protein Rab-2B; &AB232586_1(... 101 6e-25 CR954202_213(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 101 6e-25 EF457937_1(EF457937|pid:none) Lolium temulentum GTP-binding prot... 102 6e-25 AC034107_21(AC034107|pid:none) Sequence of BAC T10F20 from Arabi... 105 7e-25 BT063103_1(BT063103|pid:none) Zea mays full-length cDNA clone ZM... 108 7e-25 AK228658_1(AK228658|pid:none) Arabidopsis thaliana mRNA for hypo... 105 7e-25 BT084300_1(BT084300|pid:none) Zea mays full-length cDNA clone ZM... 106 7e-25 GN106119_1(GN106119|pid:none) Sequence 10900 from Patent WO20090... 106 7e-25 AY815506_1(AY815506|pid:none) Schistosoma japonicum SJCHGC02859 ... 103 7e-25 BT087588_1(BT087588|pid:none) Zea mays full-length cDNA clone ZM... 110 7e-25 AE014298_1596(AE014298|pid:none) Drosophila melanogaster chromos... 110 7e-25 AJ968959_1(AJ968959|pid:none) Mus musculus mRNA for RAB14 protei... 96 7e-25 BT045578_1(BT045578|pid:none) Salmo salar clone ssal-rgf-525-209... 96 7e-25 E42148(E42148)GTP-binding protein rab14 - rat 96 7e-25 (P61107) RecName: Full=Ras-related protein Rab-14; &(Q52NJ6) Re... 96 7e-25 AF030183_1(AF030183|pid:none) Entamoeba histolytica GTP-binding ... 100 7e-25 CR933405_1(CR933405|pid:none) Paramecium tetraurelia, Small GTPa... 100 7e-25 AL137068_10(AL137068|pid:none) Human DNA sequence from clone RP1... 96 7e-25 AC155344_30(AC155344|pid:none) Brassica rapa subsp. pekinensis c... 97 8e-25 AP008215_340(AP008215|pid:none) Oryza sativa (japonica cultivar-... 107 1e-24 DQ810282_29(DQ810282|pid:none) Oryza brachyantha BAC 0002C07, co... 103 1e-24 AK071461_1(AK071461|pid:none) Oryza sativa Japonica Group cDNA c... 107 1e-24 AM462529_1(AM462529|pid:none) Vitis vinifera contig VV78X101776.... 106 1e-24 BT064711_1(BT064711|pid:none) Zea mays full-length cDNA clone ZM... 106 1e-24 BC045374_1(BC045374|pid:none) Danio rerio RAB14, member RAS onco... 96 1e-24 GM977151_2(GM977151|pid:none) Sequence 59 from Patent WO20081456... 108 1e-24 BT077156_1(BT077156|pid:none) Caligus rogercresseyi clone crog-e... 107 1e-24 BT075660_1(BT075660|pid:none) Osmerus mordax clone omor-eva-509-... 103 1e-24 CR932644_1(CR932644|pid:none) Paramecium tetraurelia, Small GTPa... 108 1e-24 AB470307_1(AB470307|pid:none) Nicotiana tabacum NtRab11D mRNA fo... 100 1e-24 BT043430_1(BT043430|pid:none) Zea mays full-length cDNA clone ZM... 101 1e-24
>(Q54E92) RecName: Full=Ras-related protein RabG1; Length = 196
Score = 231 bits (588), Expect(3) = 5e-99 Identities = 113/117 (96%), Positives = 114/117 (97%) Frame = +3
Query: 39 MSDPDVFKILLIGDSAVGKTSLLLRFTDPNNFQETSVNMTSVDYKNKNITIDGRTFNLQI 218 M+D DVFKILLIGDSAVGKTSLLLRFTDPNNFQETSVNMTSVDYKNKNITIDGRTFNLQI Sbjct: 1 MNDSDVFKILLIGDSAVGKTSLLLRFTDPNNFQETSVNMTSVDYKNKNITIDGRTFNLQI 60
Query: 219 WDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVGLWMQEIQRYGVLGVSESL 389 WDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVGLWMQEIQRYGVLGVS L Sbjct: 61 WDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVGLWMQEIQRYGVLGVSRVL 117
Score = 139 bits (350), Expect(3) = 5e-99 Identities = 67/68 (98%), Positives = 68/68 (100%) Frame = +2
Query: 428 LINASIAQEYADILGIPFIETSATTGVNVEEAFMAMADEIYRNHIGGSKPSVVKPVCGSP 607 L+NASIAQEYADILGIPFIETSATTGVNVEEAFMAMADEIYRNHIGGSKPSVVKPVCGSP Sbjct: 129 LVNASIAQEYADILGIPFIETSATTGVNVEEAFMAMADEIYRNHIGGSKPSVVKPVCGSP 188
Query: 608 PRTKKNIC 631 PRTKKNIC Sbjct: 189 PRTKKNIC 196
Score = 36.6 bits (83), Expect(3) = 5e-99 Identities = 17/21 (80%), Positives = 18/21 (85%) Frame = +1
Query: 370 LALVRV*VGNKCDLEDRKLVN 432 L + RV VGNKCDLEDRKLVN Sbjct: 111 LGVSRVLVGNKCDLEDRKLVN 131
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3204285 Number of Hits to DB: 1,216,504,568 Number of extensions: 23392425 Number of successful extensions: 74521 Number of sequences better than 10.0: 3687 Number of HSP's gapped: 71943 Number of HSP's successfully gapped: 5801 Length of query: 257 Length of database: 1,040,966,779 Length adjustment: 126 Effective length of query: 131 Effective length of database: 637,226,869 Effective search space: 83476719839 Effective search space used: 83476719839 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 31 (16.5 bits)
|
PSORT |
|
VS (DIR, S) |
2 |
VH (FL, L) |
0 |
VF (FL, S) |
1 |
AH (FL, L) |
0 |
AF (FL, S) |
0 |
SL (DIR, L) |
0 |
SS (DIR, S) |
10 |
SH (FL, L) |
0 |
SF (FL, S) |
0 |
CH (FL, L) |
0 |
CF (FL, S) |
0 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
0 |
FC-IC (SUB) |
0 |