Contig-U10212-1
Contig ID Contig-U10212-1
Contig update 2002. 9.13
Contig sequence
>Contig-U10212-1 (Contig-U10212-1Q) /CSM_Contig/Contig-U10212-1Q.Seq.d
AATAAAAAAAAAAGAAAGAAAATGGGTAACAATAATAAAATGGTATTTGT
TATGGTTGATGGTATTGCAGATACATCAATACCTCAATATGAAAGAAAAA
CCACATTACAAGTTGCAAATACGCCAACAATGGATGCAATGTCATCAAGT
GGTATAAATGGTGTAATGGATCCAGTTGAACCAGGATTTGCATGTGGTAG
TGATACAGCACATCTTTCAATTTTAGGTTATGATCCAAGAAAATATTATA
GAGGTAGAGGTGCATTTGAATCAATGGGTGCTGGTTTAGATATGCAACCA
GGTGATATTGCTTTTAAATCAAATTTTGCAACAATAGATAAATCAAGTGG
AATTGTTATTTTAAGAAGAGCAGATAGAAATTTTGAACATCTTGGACCAA
CATTATGTGATTATTTAACAGGTATTAAATTACCATCATTTCCAAATTAT
AGAGTAGATGTAAAATATGCAACTGAACATAGATGTGGTGTAAGAGTTAG
AGGTCCAAATCTTACTGATTCAATCACTGGTACTGATCCATTAAAAGATA
ATTTACCATTATTAAAAGCAACACCTTTAGATATTAATTCTCATGATTCC
ATTTTAACAAGTAAAATTGTAAATGAATTATCAGATGAAATTCAAAAAGC
ATTAGAAAATCATCCAATTAATATAGAGAGAAGAGAAAAAGGTTTACCAG
TTGCAAATGTTGTATTATTACGTGGTTGTGGTGTTTGTGTTGAGGCACCA
ACCTTTAAACAAAAGTATGGAATGAATGCATTTATGATTGCTCCAACATG
TATTATCGCTGGTTTAGGTATGTCTGTAAAGATTGATGTGATTGAATCTG
AAGGTGGTACAGGTGATTATCATACAAACTTACAATCAAAAGCTGATACC
TTATTAAAGAATATATTGGATGTTGACAATGATAAATATCAATTTGGTTT
CTTACATATTAAAGCAGTAGATGATGCTGGTCATGATAAAAATGCCCCTC
TCAAAATTGAATTCTTAGAGAAAATTGATAAAATGTTACATTTTATAATT
TCACAATTAGCAATTGCTCAAAATGAAAACAAAGGAAATTTTACAATTTG
TTTAACAGGTGATCATTCAACACCAGTTTTAACAGGTGATCATTCTTATG
AACCAGTACCATTTACAATTTGTAAAGTGATTGAAGCTGATAAAATTATA
AATAAGAAAAATGATGATAATAATATTAATAATAATAATAATAGTAATAG
TAGTAATTGTTTTAGTGATAATGTTAAAGTTTTTAATGAAATTGAATCTA
CTAGTGGTGTATTAGGTAGATTCCCTGGTGGTCAAGCAATGAATATTATT
TGTCAATATATGAATAATTAATTGATAAAAAAAAAAAAAAAAAAACAATA
AAATAAATATATAATATGTATATTAAAAAAAAAAAAAAAAAAA

Gap no gap
Contig length 1443
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 8455450
End point 8454015
Strand (PLUS/MINUS) MINUS
Number of clones 4
Number of EST 6
Link to clone list U10212
List of clone(s)

est1=VFD852F,1,544
est2=SSC887F,14,604
est3=SLC865E,163,1381
est4=VFI725Z,630,1274
est5=VFD852Z,642,1347
est6=SSC887Z,704,1444
Translated Amino Acid sequence
NKKKRKKMGNNNKMVFVMVDGIADTSIPQYERKTTLQVANTPTMDAMSSSGINGVMDPVE
PGFACGSDTAHLSILGYDPRKYYRGRGAFESMGAGLDMQPGDIAFKSNFATIDKSSGIVI
LRRADRNFEHLGPTLCDYLTGIKLPSFPNYRVDVKYATEHRCGVRVRGPNLTDSITGTDP
LKDNLPLLKATPLDINSHDSILTSKIVNELSDEIQKALENHPINIERREKGLPVANVVLL
RGCGVCVEAPTFKQKYGMNAFMIAPTCIIAGLGMSVKIDVIESEGGTGDYHTNLQSKADT
LLKNILDVDNDKYQFGFLHIKAVDDAGHDKNAPLKIEFLEKIDKMLHFIISQLAIAQNEN
KGNFTICLTGDHSTPVLTGDHSYEPVPFTICKVIEADKIINKKNDDNNINNNNNSNSSNC
FSDNVKVFNEIESTSGVLGRFPGGQAMNIICQYMNN*likkkkkkq*nkyiicilkkkkk
k


Translated Amino Acid sequence (All Frames)
Frame A:
NKKKRKKMGNNNKMVFVMVDGIADTSIPQYERKTTLQVANTPTMDAMSSSGINGVMDPVE
PGFACGSDTAHLSILGYDPRKYYRGRGAFESMGAGLDMQPGDIAFKSNFATIDKSSGIVI
LRRADRNFEHLGPTLCDYLTGIKLPSFPNYRVDVKYATEHRCGVRVRGPNLTDSITGTDP
LKDNLPLLKATPLDINSHDSILTSKIVNELSDEIQKALENHPINIERREKGLPVANVVLL
RGCGVCVEAPTFKQKYGMNAFMIAPTCIIAGLGMSVKIDVIESEGGTGDYHTNLQSKADT
LLKNILDVDNDKYQFGFLHIKAVDDAGHDKNAPLKIEFLEKIDKMLHFIISQLAIAQNEN
KGNFTICLTGDHSTPVLTGDHSYEPVPFTICKVIEADKIINKKNDDNNINNNNNSNSSNC
FSDNVKVFNEIESTSGVLGRFPGGQAMNIICQYMNN*likkkkkkq*nkyiicilkkkkk
k


Frame B:
ikkkerkwvtiikwyllwlmvlqihqylnmkekphyklqirqqwmqchqvv*mv*wiqln
qdlhvvviqhifqf*vmiqeniievevhlnqwvlv*icnqvilllnqilqq*inqvellf
*eeqieilnildqhyvii*qvlnyhhfqiie*m*nmqlnidvv*elevqilliqslvlih
*kiiyhy*kqhl*ililmipf*qvkl*mnyqmkfkkh*kiiqli*reekkvyqlqmlyyy
vvvvfvlrhqplnksme*mhl*llqhvlslv*vcl*rlm*lnlkvvqviiiqtynqklip
y*riywmltmininlvsyilkq*mmlvmikmplsklns*rklikcyil*fhn*qllkmkt
keilqfv*qviiqhqf*qviilmnqyhlqfvk*lklikl*irkmmiiiliiiiivivviv
lvimlkflmklnllvvy*vdslvvkq*ilfvni*iin**kkkkknnkini*yvy*kkkkk


Frame C:
*kkkkeng*q**ngicyg*wycryintsi*kknhitsckyanngcnvikwykwcngss*t
ricmw**ystsfnfrl*skkil*r*rci*ingcwfryatr*ycf*ikfcnnr*ikwncyf
kksr*kf*tswtnim*lfnry*itiiskl*srckicn*t*mwcks*rsksy*fnhwy*si
kr*ftiiksntfry*fs*fhfnk*nck*iir*nsksirkssn*yrekrkrftsckcciit
wlwclc*gtnl*tkvwneciydcsnmyyrwfryvckd*cd*i*rwyr*lsykltiks*yl
ikeyigc*q**isiwflty*ssr*cws**kcpsqn*ilren**nvtfynftisncsk*kq
rkfynlfnr*sfntsfnr*sfl*tstiynl*sd*s**nyk*ek****y**********lf
***c*sf**n*iy*wcir*ipwwssneyylsiye*lidkkkkkktik*iynmyikkkkkk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U10212-1 (Contig-U10212-1Q)
/CSM_Contig/Contig-U10212-1Q.Seq.d
(1443 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U10212-1 (Contig-U10212-1Q) /CSM_Contig/Conti... 2347 0.0
Contig-U11380-1 (Contig-U11380-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U01500-1 (Contig-U01500-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U13027-1 (Contig-U13027-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U12913-1 (Contig-U12913-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U11652-1 (Contig-U11652-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U05257-1 (Contig-U05257-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U12916-1 (Contig-U12916-1Q) /CSM_Contig/Conti... 38 0.026
Contig-U10858-1 (Contig-U10858-1Q) /CSM_Contig/Conti... 38 0.026
Contig-U10772-1 (Contig-U10772-1Q) /CSM_Contig/Conti... 36 0.10

>Contig-U10212-1 (Contig-U10212-1Q) /CSM_Contig/Contig-U10212-1Q.Seq.d
Length = 1443

Score = 2347 bits (1184), Expect = 0.0
Identities = 1184/1184 (100%)
Strand = Plus / Plus


Query: 14 gaaagaaaatgggtaacaataataaaatggtatttgttatggttgatggtattgcagata 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 gaaagaaaatgggtaacaataataaaatggtatttgttatggttgatggtattgcagata 73


Query: 74 catcaatacctcaatatgaaagaaaaaccacattacaagttgcaaatacgccaacaatgg 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 catcaatacctcaatatgaaagaaaaaccacattacaagttgcaaatacgccaacaatgg 133


Query: 134 atgcaatgtcatcaagtggtataaatggtgtaatggatccagttgaaccaggatttgcat 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 atgcaatgtcatcaagtggtataaatggtgtaatggatccagttgaaccaggatttgcat 193


Query: 194 gtggtagtgatacagcacatctttcaattttaggttatgatccaagaaaatattatagag 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 gtggtagtgatacagcacatctttcaattttaggttatgatccaagaaaatattatagag 253


Query: 254 gtagaggtgcatttgaatcaatgggtgctggtttagatatgcaaccaggtgatattgctt 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gtagaggtgcatttgaatcaatgggtgctggtttagatatgcaaccaggtgatattgctt 313


Query: 314 ttaaatcaaattttgcaacaatagataaatcaagtggaattgttattttaagaagagcag 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ttaaatcaaattttgcaacaatagataaatcaagtggaattgttattttaagaagagcag 373


Query: 374 atagaaattttgaacatcttggaccaacattatgtgattatttaacaggtattaaattac 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 atagaaattttgaacatcttggaccaacattatgtgattatttaacaggtattaaattac 433


Query: 434 catcatttccaaattatagagtagatgtaaaatatgcaactgaacatagatgtggtgtaa 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 catcatttccaaattatagagtagatgtaaaatatgcaactgaacatagatgtggtgtaa 493


Query: 494 gagttagaggtccaaatcttactgattcaatcactggtactgatccattaaaagataatt 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gagttagaggtccaaatcttactgattcaatcactggtactgatccattaaaagataatt 553


Query: 554 taccattattaaaagcaacacctttagatattaattctcatgattccattttaacaagta 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 taccattattaaaagcaacacctttagatattaattctcatgattccattttaacaagta 613


Query: 614 aaattgtaaatgaattatcagatgaaattcaaaaagcattagaaaatcatccaattaata 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aaattgtaaatgaattatcagatgaaattcaaaaagcattagaaaatcatccaattaata 673


Query: 674 tagagagaagagaaaaaggtttaccagttgcaaatgttgtattattacgtggttgtggtg 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tagagagaagagaaaaaggtttaccagttgcaaatgttgtattattacgtggttgtggtg 733


Query: 734 tttgtgttgaggcaccaacctttaaacaaaagtatggaatgaatgcatttatgattgctc 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 tttgtgttgaggcaccaacctttaaacaaaagtatggaatgaatgcatttatgattgctc 793


Query: 794 caacatgtattatcgctggtttaggtatgtctgtaaagattgatgtgattgaatctgaag 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 caacatgtattatcgctggtttaggtatgtctgtaaagattgatgtgattgaatctgaag 853


Query: 854 gtggtacaggtgattatcatacaaacttacaatcaaaagctgataccttattaaagaata 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 gtggtacaggtgattatcatacaaacttacaatcaaaagctgataccttattaaagaata 913


Query: 914 tattggatgttgacaatgataaatatcaatttggtttcttacatattaaagcagtagatg 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 tattggatgttgacaatgataaatatcaatttggtttcttacatattaaagcagtagatg 973


Query: 974 atgctggtcatgataaaaatgcccctctcaaaattgaattcttagagaaaattgataaaa 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 atgctggtcatgataaaaatgcccctctcaaaattgaattcttagagaaaattgataaaa 1033


Query: 1034 tgttacattttataatttcacaattagcaattgctcaaaatgaaaacaaaggaaatttta 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 tgttacattttataatttcacaattagcaattgctcaaaatgaaaacaaaggaaatttta 1093


Query: 1094 caatttgtttaacaggtgatcattcaacaccagttttaacaggtgatcattcttatgaac 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 caatttgtttaacaggtgatcattcaacaccagttttaacaggtgatcattcttatgaac 1153


Query: 1154 cagtaccatttacaatttgtaaagtgattgaagctgataaaatt 1197
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1154 cagtaccatttacaatttgtaaagtgattgaagctgataaaatt 1197


Score = 176 bits (89), Expect = 4e-44
Identities = 89/89 (100%)
Strand = Plus / Plus


Query: 1288 gaaattgaatctactagtggtgtattaggtagattccctggtggtcaagcaatgaatatt 1347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1288 gaaattgaatctactagtggtgtattaggtagattccctggtggtcaagcaatgaatatt 1347


Query: 1348 atttgtcaatatatgaataattaattgat 1376
|||||||||||||||||||||||||||||
Sbjct: 1348 atttgtcaatatatgaataattaattgat 1376


Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus


Query: 1396 caataaaataaatatataatatgtatatt 1424
|||||||||||||||||||||||||||||
Sbjct: 1396 caataaaataaatatataatatgtatatt 1424


>Contig-U11380-1 (Contig-U11380-1Q) /CSM_Contig/Contig-U11380-1Q.Seq.d
Length = 2375

Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus


Query: 612 taaaattgtaaatgaattatca 633
||||||||||||||||||||||
Sbjct: 1496 taaaattgtaaatgaattatca 1475


>Contig-U01500-1 (Contig-U01500-1Q) /CSM_Contig/Contig-U01500-1Q.Seq.d
Length = 1367

Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus


Query: 626 aattatcagatgaaattcaaaaagca 651
|||||||| |||||||||||||||||
Sbjct: 1026 aattatcatatgaaattcaaaaagca 1051


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 22,496
Number of Sequences: 6905
Number of extensions: 22496
Number of successful extensions: 2431
Number of sequences better than 10.0: 251
length of query: 1443
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1427
effective length of database: 5,564,391
effective search space: 7940385957
effective search space used: 7940385957
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.18
Homology vs DNA
Query= Contig-U10212-1 (Contig-U10212-1Q) /CSM_Contig/Contig-U10212-1Q.Seq.d
(1443 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU061080) Dictyostelium discoideum slug cDNA, clone SLC865. 1306 0.0 1
(BJ432282) Dictyostelium discoideum cDNA clone:ddv18b07, 3' ... 1102 0.0 1
(BJ430748) Dictyostelium discoideum cDNA clone:ddv8h14, 3' e... 1078 0.0 1
(BJ412463) Dictyostelium discoideum cDNA clone:ddv8h14, 5' e... 1053 0.0 1
(AU034430) Dictyostelium discoideum slug cDNA, clone SLC865. 971 0.0 2
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 940 0.0 5
(C93983) Dictyostelium discoideum slug cDNA, clone SSC887. 930 0.0 3
(AU071980) Dictyostelium discoideum slug cDNA, clone SSC887. 476 e-129 1
(AY096623) Arabidopsis thaliana unknown protein (At3g30841) ... 52 3e-16 7
(AY072183) Arabidopsis thaliana unknown protein (At3g30841) ... 52 6e-16 7
(AY122912) Arabidopsis thaliana unknown protein (At4g09520) ... 48 1e-15 6
(FG439989) 001110KADA999058HT (KADA) A. deliciosa ripe fruit... 66 2e-15 2
(BX826833) Arabidopsis thaliana Full-length cDNA Complete se... 48 6e-15 6
(DR369158) 12839274 CERES-AN65 Arabidopsis thaliana cDNA clo... 48 2e-14 4
(EE256132) RFAAA94TH Castor bean cDNA library from flowers,8... 58 1e-11 3
(CD859297) CNI.003P09F020204 CNI Pisum sativum cDNA clone CN... 48 4e-11 5
(EE260071) RFABJ28TH Castor bean cDNA library from flowers,8... 58 1e-10 2
(CA483314) LuP12008D08R LuP12 Linum usitatissimum cDNA clone... 52 6e-10 3
(EL447688) CHTM26426.b1_D08.ab1 CHT(LMS) Jerusalem artichoke... 54 5e-09 2
(CA483355) LuP12008H03R LuP12 Linum usitatissimum cDNA clone... 52 5e-09 2
(EH764056) CNSM10063.b1_M19.ab1 CNS(LMS) yellow starthistle ... 50 8e-09 3
(EH766853) CNSM13116.b1_G15.ab1 CNS(LMS) yellow starthistle ... 50 8e-09 3
(EX039040) BR023684 floral bud cDNA library KBFL Brassica ra... 50 2e-08 3
(EX018014) BR002658 light-chilled whole plant cDNA library K... 50 2e-08 3
(EH721590) CNML7962.b1_C24.ab1 CNM(LMS) spotted knapweed Cen... 50 3e-08 3
(EH713354) CNML12893.b1_I08.ab1 CNM(LMS) spotted knapweed Ce... 50 4e-08 3
(EH712731) CNML12315.b1_E07.ab1 CNM(LMS) spotted knapweed Ce... 50 8e-08 2
(EL393184) CFFM4690.b1_C21.ab1 CFF(LMS) safflower Carthamus ... 50 8e-08 2
(AL374983) Medicago truncatula EST MtBB10E10F2 : T3 end of c... 56 9e-08 2
(DY814410) CTOX2816.b1_P07.ab1 CTO(XYZ) dandelion Taraxacum ... 56 1e-07 4
(DY812476) CTOX21228.b1_H03.ab1 CTO(XYZ) dandelion Taraxacum... 56 1e-07 4
(AW775068) EST334219 KV3 Medicago truncatula cDNA clone pKV3... 56 1e-07 2
(CX947987) DH0AQA8ZF06RM1 HaDevS1 Helianthus annuus cDNA clo... 46 1e-07 3
(DW015670) EST1224631 MTY Medicago truncatula cDNA clone MTY... 56 1e-07 2
(CB892304) EST649273 KV3 Medicago truncatula cDNA clone KV3-... 56 1e-07 2
(BG646213) EST507832 KV3 Medicago truncatula cDNA clone pKV3... 56 1e-07 2
(EL415086) CHCL3775.b1_N08.ab1 CHC(LMS) Texas blueweed Helia... 46 2e-07 3
(EL455291) CHTM7933.b1_I16.ab1 CHT(LMS) Jerusalem artichoke ... 46 2e-07 3
(BX824718) Arabidopsis thaliana Full-length cDNA Complete se... 36 3e-07 6
(DY674886) STRBL79JX cold-stressed Fragaria vesca seedlings ... 50 5e-07 3
(EV838442) TT1E621TH Tetrahymena thermophila SB210 cDNA libr... 44 7e-07 3
(EH713588) CNML13117.b1_I15.ab1 CNM(LMS) spotted knapweed Ce... 50 1e-06 2
(CD837355) BN45.051O17F020107 BN45 Brassica napus cDNA clone... 44 4e-06 3
(ES906534) BNARO5GH_T3_014_G02_30NOV2006_004 Brassica napus ... 44 8e-06 3
(DY913789) CHAX9206.b1_L22.ab1 CHA(XYZ) common wild sunflowe... 40 9e-06 3
(BI273683) FiS1-N17 Forrest infected Subtraction Library Gly... 50 1e-05 2
(AL161515) Arabidopsis thaliana DNA chromosome 4, contig fra... 40 1e-05 3
(AC006567) Arabidopsis thaliana BAC T15G18 from chromosome I... 40 1e-05 3
(ES051178) 083460_0809_2059 Arabidopsis ovule high throughpu... 40 2e-05 3
(EL478170) CHUL6745.b1_A08.ab1 CHU(LMS) puzzle sunflower Hel... 46 2e-05 3
(DY912261) CHAX7554.b1_C18.ab1 CHA(XYZ) common wild sunflowe... 40 3e-05 3
(EL412965) CHCL10537.b1_B19.ab1 CHC(LMS) Texas blueweed Heli... 40 3e-05 3
(EL472038) CHTM29117.b1_J08.ab1 CHT(LMS) Jerusalem artichoke... 40 3e-05 3
(DY907810) CHAX2637.b1_J12.ab1 CHA(XYZ) common wild sunflowe... 40 3e-05 3
(DY907813) CHAX2640.b1_P12.ab1 CHA(XYZ) common wild sunflowe... 40 3e-05 3
(DY652806) PU4_plate9_G05 PU4 Prunus persica cDNA similar to... 40 6e-05 2
(CN731285) 24RDBNH_UP_017_G02_09JAN2004_004 Brassica napus 2... 46 1e-04 2
(DV691564) CGN-35273 Leaf Coffea canephora cDNA clone cccl16... 48 1e-04 3
(DW064163) CLLY3848.b1_O01.ab1 CLL(XYZ) lettuce saligna Lact... 48 4e-04 3
(DT473184) WS01228.BR_N12 PT-GT-FL-A-3 Populus trichocarpa c... 42 4e-04 3
(DT507942) WS02419.BR_K05 PTxD-ICC-N-A-14 Populus trichocarp... 42 4e-04 3
(CU915461) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 7e-04 2
(EX110286) BR096576 whole plant cDNA library KFYP Brassica r... 50 0.001 2
(DY816104) CTOX4656.b1_O11.ab1 CTO(XYZ) dandelion Taraxacum ... 56 0.002 2
(DY816244) CTOX4804.b1_G02.ab1 CTO(XYZ) dandelion Taraxacum ... 56 0.002 2
(DY908012) CHAX2859.b1_F19.ab1 CHA(XYZ) common wild sunflowe... 38 0.003 3
(DW136499) CLSY4043.b1_E04.ab1 CLS(XYZ) lettuce sativa Lactu... 56 0.004 1
(BU005935) QGG9H21.yg.ab1 QG_EFGHJ lettuce serriola Lactuca ... 56 0.004 1
(BQ859149) QGC12D16.yg.ab1 QG_ABCDI lettuce salinas Lactuca ... 56 0.004 1
(BG457127) NF095E01PL1F1005 Phosphate starved leaf Medicago ... 56 0.004 1
(AW774995) EST334146 KV3 Medicago truncatula cDNA clone pKV3... 56 0.004 1
(AW691934) NF050G06ST1F1000 Developing stem Medicago truncat... 56 0.004 1
(EV054202) BNSCS3CT_UP_219_C06_13MAY2007_044 Brassica napus ... 42 0.005 2
(EX063191) BR047835 etiolated mature leaf cDNA library KBLW ... 42 0.005 2
(FG881990) UCRVU07_CCNP14510_b1 Cowpea UCR 779 Mixed Tissue ... 42 0.005 2
(FG851323) UCRVU05_CCNN17375_b1 Cowpea IT84S-2049 Mixed Tiss... 42 0.005 2
(EV190469) 0087950 Brassica napus Cold acclimation - dark Br... 42 0.005 2
(EX128231) BR112061 ovule and silique cDNA library KHOS Bras... 42 0.005 2
(FG902092) UCRVU08_CCNS2097_b1 Cowpea IT97K-461-4 Mixed Tiss... 42 0.005 2
(EL454526) CHTM7197.b1_I24.ab1 CHT(LMS) Jerusalem artichoke ... 38 0.006 3
(DT753948) EST1187797 Aquilegia cDNA library Aquilegia formo... 40 0.006 3
(DY907958) CHAX2797.b1_J03.ab1 CHA(XYZ) common wild sunflowe... 38 0.006 3
(DW054046) CLLX6640.b1_P03.ab1 CLL(XYZ) lettuce saligna Lact... 48 0.006 2
(AP002043) Arabidopsis thaliana genomic DNA, chromosome 3, P... 30 0.009 3
(BX836912) Arabidopsis thaliana Full-length cDNA 5PRIM end o... 30 0.012 3
(CK263215) EST709293 potato abiotic stress cDNA library Sola... 36 0.013 2
(BX837465) Arabidopsis thaliana Full-length cDNA 5PRIM end o... 30 0.013 3
(CV469613) 42304.1 Common Scab-Challenged Tubers Solanum tub... 36 0.013 2
(BF053079) EST438309 potato leaves and petioles Solanum tube... 36 0.013 2
(EV236066) VV_PEb24b06.b1 Vitis vinifera cv. perlette LibB V... 54 0.015 1
(DB891813) Populus nigra mRNA, clone: PnFL2-097_E22, 5'end. 48 0.018 2
(DB877372) Populus nigra mRNA, clone: PnFL2-015_M17, 5'end. 48 0.019 2
(CF807457) psHB024xK16f USDA-IFAFS:Expression of Phytophthor... 40 0.019 2
(BZ085381) llb98b08.b1 B.oleracea002 Brassica oleracea genom... 40 0.022 2
(AX926714) Sequence 4 from Patent WO03084989. 38 0.052 11
(AC188084) Macaca mulatta chromosome UNK clone CH250-86H12, ... 52 0.060 1
(DT746424) EST1180273 Aquilegia cDNA library Aquilegia formo... 46 0.092 2
(DQ058006) Iris tectorum clone It-HF1 putative phosphopyruva... 40 0.11 2
(CU463195) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 0.14 2
(CT560809) A BAC library has been constructed from cultivar ... 50 0.24 1

>(AU061080) Dictyostelium discoideum slug cDNA, clone SLC865.
Length = 671

Score = 1306 bits (659), Expect = 0.0
Identities = 659/659 (100%)
Strand = Plus / Plus


Query: 175 gttgaaccaggatttgcatgtggtagtgatacagcacatctttcaattttaggttatgat 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 gttgaaccaggatttgcatgtggtagtgatacagcacatctttcaattttaggttatgat 72


Query: 235 ccaagaaaatattatagaggtagaggtgcatttgaatcaatgggtgctggtttagatatg 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 ccaagaaaatattatagaggtagaggtgcatttgaatcaatgggtgctggtttagatatg 132


Query: 295 caaccaggtgatattgcttttaaatcaaattttgcaacaatagataaatcaagtggaatt 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 caaccaggtgatattgcttttaaatcaaattttgcaacaatagataaatcaagtggaatt 192


Query: 355 gttattttaagaagagcagatagaaattttgaacatcttggaccaacattatgtgattat 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gttattttaagaagagcagatagaaattttgaacatcttggaccaacattatgtgattat 252


Query: 415 ttaacaggtattaaattaccatcatttccaaattatagagtagatgtaaaatatgcaact 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttaacaggtattaaattaccatcatttccaaattatagagtagatgtaaaatatgcaact 312


Query: 475 gaacatagatgtggtgtaagagttagaggtccaaatcttactgattcaatcactggtact 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gaacatagatgtggtgtaagagttagaggtccaaatcttactgattcaatcactggtact 372


Query: 535 gatccattaaaagataatttaccattattaaaagcaacacctttagatattaattctcat 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gatccattaaaagataatttaccattattaaaagcaacacctttagatattaattctcat 432


Query: 595 gattccattttaacaagtaaaattgtaaatgaattatcagatgaaattcaaaaagcatta 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gattccattttaacaagtaaaattgtaaatgaattatcagatgaaattcaaaaagcatta 492


Query: 655 gaaaatcatccaattaatatagagagaagagaaaaaggtttaccagttgcaaatgttgta 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gaaaatcatccaattaatatagagagaagagaaaaaggtttaccagttgcaaatgttgta 552


Query: 715 ttattacgtggttgtggtgtttgtgttgaggcaccaacctttaaacaaaagtatggaatg 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ttattacgtggttgtggtgtttgtgttgaggcaccaacctttaaacaaaagtatggaatg 612


Query: 775 aatgcatttatgattgctccaacatgtattatcgctggtttaggtatgtctgtaaagat 833
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aatgcatttatgattgctccaacatgtattatcgctggtttaggtatgtctgtaaagat 671

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,610,215,498
Number of extensions: 98241770
Number of successful extensions: 7963224
Number of sequences better than 10.0: 243
Length of query: 1443
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1419
Effective length of database: 97,308,875,965
Effective search space: 138081294994335
Effective search space used: 138081294994335
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.27
Homology vs Protein
Query= Contig-U10212-1 (Contig-U10212-1Q) /CSM_Contig/Contig-U10212-1Q.Seq.d
(1443 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC115612_48(AC115612|pid:none) Dictyostelium discoideum chromoso... 844 0.0
AP002043_2(AP002043|pid:none) Arabidopsis thaliana genomic DNA, ... 457 e-127
AY122912_1(AY122912|pid:none) Arabidopsis thaliana unknown prote... 455 e-126
AL161515_7(AL161515|pid:none) Arabidopsis thaliana DNA chromosom... 441 e-122
AK102566_1(AK102566|pid:none) Oryza sativa Japonica Group cDNA c... 416 e-114
(P58813) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 259 1e-67
(O27628) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 257 8e-67
(Q59007) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 255 2e-66
(A8AC98) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 249 2e-64
CP000867_1221(CP000867|pid:none) Methanococcus maripaludis C6, c... 248 5e-64
(Q975P3) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 247 7e-64
(A6VH25) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 241 4e-62
(Q980A0) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 241 6e-62
(A4YIX4) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 240 8e-62
(O57742) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 240 1e-61
CP000855_444(CP000855|pid:none) Thermococcus onnurineus NA1, com... 240 1e-61
CP001404_1030(CP001404|pid:none) Sulfolobus islandicus Y.N.15.51... 239 2e-61
(Q979H8) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 238 3e-61
(Q5JI21) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 238 3e-61
CP000505_1552(CP000505|pid:none) Thermofilum pendens Hrk 5, comp... 238 5e-61
AM114193_1989(AM114193|pid:none) Uncultured methanogenic archaeo... 237 7e-61
(Q9HL27) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 234 4e-60
(P58814) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 233 2e-59
(Q2NES7) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 228 3e-58
CT005266_230(CT005266|pid:none) Leishmania major strain Friedlin... 228 5e-58
CT573071_873(CT573071|pid:none) Kuenenia stuttgartiensis genome ... 224 8e-57
CP000382_1498(CP000382|pid:none) Clostridium novyi NT, complete ... 223 2e-56
(A3MWR8) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 219 2e-55
(A2SR62) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 216 1e-54
(A3CSK8) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 216 2e-54
(B1Y9H0) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 216 2e-54
AJ621333_1(AJ621333|pid:none) Thermoproteus tenax gpmA gene for ... 200 1e-49
AY458630_9(AY458630|pid:none) Uncultured marine bacterium 106 cl... 191 4e-47
EU964822_1(EU964822|pid:none) Zea mays clone 281814 unknown mRNA. 187 8e-46
AY714845_34(AY714845|pid:none) Uncultured archaeon GZfos27B6 clo... 176 1e-42
AY714860_17(AY714860|pid:none) Uncultured archaeon GZfos34G5 clo... 175 3e-42
CP001147_1619(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 174 7e-42
(Q72GG0) RecName: Full=Probable 2,3-bisphosphoglycerate-independ... 173 1e-41
CP000575_330(CP000575|pid:none) Staphylothermus marinus F1, comp... 172 4e-41
CP000852_332(CP000852|pid:none) Caldivirga maquilingensis IC-167... 171 6e-41
CP000812_275(CP000812|pid:none) Thermotoga lettingae TMO, comple... 169 2e-40
AM114193_978(AM114193|pid:none) Uncultured methanogenic archaeon... 169 2e-40
(Q9X295) RecName: Full=Probable 2,3-bisphosphoglycerate-independ... 169 2e-40
(Q9YBI2) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 169 3e-40
CP000102_465(CP000102|pid:none) Methanosphaera stadtmanae DSM 30... 169 3e-40
AJ965256_600(AJ965256|pid:none) Dehalococcoides sp. CBDB1 comple... 168 4e-40
CP001147_1223(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 168 4e-40
(Q12UL5) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 168 5e-40
(A5ILK6) RecName: Full=Probable 2,3-bisphosphoglycerate-independ... 168 5e-40
CP000688_665(CP000688|pid:none) Dehalococcoides sp. BAV1, comple... 168 5e-40
CP000609_1546(CP000609|pid:none) Methanococcus maripaludis C5, c... 166 3e-39
CP000969_1035(CP000969|pid:none) Thermotoga sp. RQ2, complete ge... 165 3e-39
AP009389_1598(AP009389|pid:none) Pelotomaculum thermopropionicum... 164 6e-39
CP000867_831(CP000867|pid:none) Methanococcus maripaludis C6, co... 164 7e-39
(B7IDT4) RecName: Full=Probable 2,3-bisphosphoglycerate-independ... 164 1e-38
CP000027_723(CP000027|pid:none) Dehalococcoides ethenogenes 195,... 162 4e-38
CP000916_964(CP000916|pid:none) Thermotoga neapolitana DSM 4359,... 162 4e-38
CP001146_1632(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 161 5e-38
CP001089_2439(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 160 8e-38
CP001251_7(CP001251|pid:none) Dictyoglomus turgidum DSM 6724, co... 160 8e-38
(P58812) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 160 1e-37
(O66820) RecName: Full=Probable 2,3-bisphosphoglycerate-independ... 160 1e-37
(Q74C57) RecName: Full=Probable 2,3-bisphosphoglycerate-independ... 159 2e-37
CP000493_1150(CP000493|pid:none) Hyperthermus butylicus DSM 5456... 159 2e-37
(A6LMV5) RecName: Full=Probable 2,3-bisphosphoglycerate-independ... 159 2e-37
CP000780_672(CP000780|pid:none) Candidatus Methanoregula boonei ... 159 2e-37
AE015928_2402(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 158 5e-37
CP001322_3040(CP001322|pid:none) Desulfatibacillum alkenivorans ... 158 5e-37
CP000771_714(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 157 7e-37
CP000860_1001(CP000860|pid:none) Candidatus Desulforudis audaxvi... 156 2e-36
CP000879_138(CP000879|pid:none) Petrotoga mobilis SJ95, complete... 156 2e-36
AY714832_5(AY714832|pid:none) Uncultured archaeon GZfos1C11 clon... 156 2e-36
CP001348_2096(CP001348|pid:none) Clostridium cellulolyticum H10,... 155 3e-36
AE008384_1418(AE008384|pid:none) Methanosarcina mazei strain Goe... 152 2e-35
CP001140_335(CP001140|pid:none) Desulfurococcus kamchatkensis 12... 152 3e-35
CR626927_534(CR626927|pid:none) Bacteroides fragilis NCTC 9343, ... 152 4e-35
CP000568_1282(CP000568|pid:none) Clostridium thermocellum ATCC 2... 150 8e-35
(Q46E58) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 150 8e-35
CP000678_153(CP000678|pid:none) Methanobrevibacter smithii ATCC ... 150 1e-34
CP000142_1630(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 149 2e-34
CP000252_133(CP000252|pid:none) Syntrophus aciditrophicus SB, co... 149 3e-34
(A0B6L2) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 149 3e-34
CP000448_1250(CP000448|pid:none) Syntrophomonas wolfei subsp. wo... 149 3e-34
CP000742_1102(CP000742|pid:none) Methanococcus vannielii SB, com... 149 3e-34
BX294148_183(BX294148|pid:none) Rhodopirellula baltica SH 1 comp... 147 7e-34
AP010656_658(AP010656|pid:none) Candidatus Azobacteroides pseudo... 147 9e-34
CP000142_907(CP000142|pid:none) Pelobacter carbinolicus DSM 2380... 147 1e-33
CP001390_2736(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 147 1e-33
CP000252_2639(CP000252|pid:none) Syntrophus aciditrophicus SB, c... 146 2e-33
CP000148_1412(CP000148|pid:none) Geobacter metallireducens GS-15... 145 3e-33
CP001114_2500(CP001114|pid:none) Deinococcus deserti VCD115, com... 145 3e-33
AJ965256_1452(AJ965256|pid:none) Dehalococcoides sp. CBDB1 compl... 145 4e-33
CR522870_1731(CR522870|pid:none) Desulfotalea psychrophila LSv54... 145 4e-33
CP000139_1986(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 145 5e-33
CP000027_1574(CP000027|pid:none) Dehalococcoides ethenogenes 195... 144 8e-33
(Q60326) RecName: Full=2,3-bisphosphoglycerate-independent phosp... 142 2e-32
CP000562_700(CP000562|pid:none) Methanoculleus marisnigri JR1, c... 142 3e-32
EU016628_27(EU016628|pid:none) Uncultured Group I marine crenarc... 142 4e-32
CP001124_1860(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 141 7e-32
(Q9RSA0) RecName: Full=Probable 2,3-bisphosphoglycerate-independ... 141 7e-32
CP000698_2343(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 140 1e-31
(Q1IW58) RecName: Full=Probable 2,3-bisphosphoglycerate-independ... 138 6e-31
CP000471_804(CP000471|pid:none) Magnetococcus sp. MC-1, complete... 133 2e-29
AY632421_12(AY632421|pid:none) Streptomyces viridochromogenes PT... 104 9e-21
CP000745_1605(CP000745|pid:none) Methanococcus maripaludis C7, c... 95 7e-18
CP001197_1400(CP001197|pid:none) Desulfovibrio vulgaris str. 'Mi... 90 2e-16
AF146566_1(AF146566|pid:none) Methanococcus maripaludis phosphon... 89 4e-16
BX950229_598(BX950229|pid:none) Methanococcus maripaludis strain... 87 2e-15
AB029917_1(AB029917|pid:none) Streptomyces hygroscopicus orfZZ g... 72 4e-11
CP000742_1449(CP000742|pid:none) Methanococcus vannielii SB, com... 71 9e-11
AM181176_4870(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 40 0.21
CP001047_422(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 37 1.4
CP001279_315(CP001279|pid:none) Nautilia profundicola AmH, compl... 37 1.4
CR380958_343(CR380958|pid:none) Candida glabrata strain CBS138 c... 37 1.4
CP000117_1950(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 36 3.0
CP000539_3284(CP000539|pid:none) Acidovorax sp. JS42, complete g... 36 4.0
A59390(A59390) probable phosphodiesterase I (EC 3.1.4.1) / nucle... 35 6.8
(Q31IN4) RecName: Full=50S ribosomal protein L25; AltName: Full=... 35 6.8
BC089320_1(BC089320|pid:none) Mus musculus ectonucleotide pyroph... 35 6.8
(Q9EQG7) RecName: Full=Ectonucleotide pyrophosphatase/phosphodie... 35 6.8
AF315810_1(AF315810|pid:none) Rhizobium leguminosarum bv. trifol... 35 6.8
AK220510_1(AK220510|pid:none) Mus musculus mRNA for mKIAA4152 pr... 35 6.8
CP001392_2702(CP001392|pid:none) Diaphorobacter sp. TPSY, comple... 35 8.9
AE014187_340(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 35 8.9
AY456035_1(AY456035|pid:none) Gibberella moniliformis putative h... 35 8.9

>AC115612_48(AC115612|pid:none) Dictyostelium discoideum chromosome 2
map 6245135-6357017 strain AX4, complete sequence.
Length = 449

Score = 844 bits (2181), Expect = 0.0
Identities = 420/443 (94%), Positives = 420/443 (94%)
Frame = +1

Query: 40 MVFVMVDGIADTSIPQYERKTTLQVANTPTMDAMSSSGINGVMDPVEPGFACGSDTAHLS 219
MVFVMVDGIADTSIPQYERKTTLQVANTPTMDAMSSSGINGVMDPVEPGFACGSDTAHLS
Sbjct: 7 MVFVMVDGIADTSIPQYERKTTLQVANTPTMDAMSSSGINGVMDPVEPGFACGSDTAHLS 66

Query: 220 ILGYDPRKYYRGRGAFESMGAGLDMQPGDIAFKSNFATIDKSSGIVILRRADRNFEHLGP 399
ILGYDPRKYYRGRGAFESMGAGLDMQPGDIAFKSNFATIDKSSGIVILRRADRNFEHLGP
Sbjct: 67 ILGYDPRKYYRGRGAFESMGAGLDMQPGDIAFKSNFATIDKSSGIVILRRADRNFEHLGP 126

Query: 400 TLCDYLTGIKLPSFPNYRVDVKYATEHRCGVRVRGPNLTDSITGTDPLKDNLPLLKATPL 579
TLCDYLTGIKLPSFPNYRVDVKYATEHRCGVRVRGPNLTDSITGTDPLKDNLPLLKATPL
Sbjct: 127 TLCDYLTGIKLPSFPNYRVDVKYATEHRCGVRVRGPNLTDSITGTDPLKDNLPLLKATPL 186

Query: 580 DINSHDSILTSKIVNELSDEIQKALENHPINIERREKGLPVANVVLLRGCGVCVEAPTFK 759
DINSHDSILTSKIVNELSDEIQKALENHPINIERREKGLPVANVVLLRGCGVCVEAPTFK
Sbjct: 187 DINSHDSILTSKIVNELSDEIQKALENHPINIERREKGLPVANVVLLRGCGVCVEAPTFK 246

Query: 760 QKYGMNAFMIAPTCIIAGLGMSVKIDVIESEGGTGDYHTNLQSKADTLLKNILDVDNDKY 939
QKYGMNAFMIAPTCIIAGLGMSVKIDVIESEGGTGDYHTNLQSKADTLLKNILDVDNDKY
Sbjct: 247 QKYGMNAFMIAPTCIIAGLGMSVKIDVIESEGGTGDYHTNLQSKADTLLKNILDVDNDKY 306

Query: 940 QFGFLHIKAVDDAGHDKNAPLKIEFLEKIDKMLHFIISQLAIAQNENKGNFTICLTGDHS 1119
QFGFLHIKAVDDAGHDKNAPLKIEFLEKIDKMLHFIISQLAIAQNENKGNFTICLTGDHS
Sbjct: 307 QFGFLHIKAVDDAGHDKNAPLKIEFLEKIDKMLHFIISQLAIAQNENKGNFTICLTGDHS 366

Query: 1120 TPVLTGDHSYEPVPFTICKVIEAXXXXXXXXXXXXXXXXXXXXXXXCFSDNVKVFNEIES 1299
TPVLTGDHSYEPVPFTICKVIEA CFSDNVKVFNEIES
Sbjct: 367 TPVLTGDHSYEPVPFTICKVIEADKIINKKNDDNNINNNNNSNSSNCFSDNVKVFNEIES 426

Query: 1300 TSGVLGRFPGGQAMNIICQYMNN 1368
TSGVLGRFPGGQAMNIICQYMNN
Sbjct: 427 TSGVLGRFPGGQAMNIICQYMNN 449

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,042,082,514
Number of extensions: 40406419
Number of successful extensions: 104604
Number of sequences better than 10.0: 125
Number of HSP's gapped: 104222
Number of HSP's successfully gapped: 157
Length of query: 481
Length of database: 1,040,966,779
Length adjustment: 132
Effective length of query: 349
Effective length of database: 618,001,159
Effective search space: 215682404491
Effective search space used: 215682404491
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.62 gvh: 0.53 alm: 0.31 top: 0.23 tms: 0.07 mit: 0.30 mip: 0.02
nuc: 0.12 erl: 0.00 erm: 0.60 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.04 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 1.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

36.0 %: mitochondrial
24.0 %: nuclear
16.0 %: Golgi
12.0 %: endoplasmic reticulum
8.0 %: cytoplasmic
4.0 %: vacuolar

>> prediction for Contig-U10212-1 is mit

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 2
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0