| Contig-U10171-1 |
| Contig ID |
Contig-U10171-1 |
| Contig update |
2002. 9.13 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
1196 |
| Chromosome number (1..6, M) |
6 |
| Chromosome length |
3595308 |
| Start point |
2660554 |
| End point |
2661757 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
3 |
| Number of EST |
4 |
| Link to clone list |
U10171 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.18 |
| Homology vs DNA |
Query= Contig-U10171-1 (Contig-U10171-1Q) /CSM_Contig/Contig-U10171-1Q.Seq.d
(1196 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ432528) Dictyostelium discoideum cDNA clone:ddv18o24, 3' ... 559 0.0 4
(BJ389618) Dictyostelium discoideum cDNA clone:dds19n12, 5' ... 926 0.0 1
(BJ414699) Dictyostelium discoideum cDNA clone:ddv20l02, 5' ... 924 0.0 1
(BJ414380) Dictyostelium discoideum cDNA clone:ddv18o24, 5' ... 827 0.0 1
(BJ401802) Dictyostelium discoideum cDNA clone:dds19n12, 3' ... 668 0.0 3
(BJ432886) Dictyostelium discoideum cDNA clone:ddv20l02, 3' ... 559 0.0 3
(AX489077) Sequence 6377 from Patent WO02053728. 92 6e-28 5
(AR545823) Sequence 954 from patent US 6747137. 84 2e-25 5
(AM641887) Entamoeba dispar GSS, clone dispar90b07.q1k. 76 4e-18 3
(CZ535540) SRAA-aac97h07.b1 Strongyloides ratti whole genome... 68 2e-14 4
(EC821276) SME00003100 esmbsro2 Sawyeria marylandensis cDNA,... 88 9e-13 1
(AP006852) Candida albicans genomic DNA, chromosome 7, compl... 84 1e-11 1
(CD524411) ku99f11.y1 Strongyloides ratti PA female naive pA... 68 2e-11 2
(AM649699) Entamoeba moshkovskii FIC GSS, clone mosh069g11.p1k. 56 1e-10 3
(FG075855) UI-FF-IF0-abm-p-21-0-UI.r1 Ceratitis capitata emb... 54 2e-09 2
(DC543796) Bombyx mori cDNA, clone:E_FL_dpe-_23B17_F_0, 5' e... 42 2e-09 4
(EC753446) PPE00007603 Agencourt Biosciences Agen-0020 Non-n... 68 2e-08 2
(CD561219) B0426B01-5 NIA Mouse E6.5 Whole Embryo cDNA Libra... 50 4e-08 3
(DA560547) Homo sapiens cDNA clone HEART2001365, 5' end, mRN... 58 4e-08 3
(ES817829) UFL_287_63 Cotton fiber 0-10 day post anthesis Go... 72 5e-08 1
(ES803872) UFL_551_47 Cotton fiber 0-10 day post anthesis Go... 72 5e-08 1
(DW488644) GH_RMIRS_070_F10_R Cotton Normalized Library rand... 72 5e-08 1
(DW488643) GH_RMIRS_070_F10_ Cotton Normalized Library rando... 72 5e-08 1
(BG441623) GA__Ea0014A13f Gossypium arboreum 7-10 dpa fiber ... 72 5e-08 1
(BF271993) GA__Eb0013H03f Gossypium arboreum 7-10 dpa fiber ... 72 5e-08 1
(EE136797) SiJWG08AAS Lausanne fire ant library Solenopsis i... 68 7e-08 2
(BC114712) Bos taurus GPN-loop GTPase 1, mRNA (cDNA clone MG... 46 7e-08 4
(EE134981) SiJWF10ADS Lausanne fire ant library Solenopsis i... 68 8e-08 2
(CS397442) Sequence 6717 from Patent WO2006025879. 50 1e-07 3
(CS393800) Sequence 3075 from Patent WO2006025879. 50 1e-07 3
(CS217398) Sequence 6717 from Patent WO2005111246. 50 1e-07 3
(CS213756) Sequence 3075 from Patent WO2005111246. 50 1e-07 3
(EV625298) LB01454.CR_P17 GC_BGC-14 Bos taurus cDNA clone IM... 46 1e-07 3
(AW668711) 111090 MARC 1BOV Bos taurus cDNA 5', mRNA sequence. 46 1e-07 3
(AV593601) Bos taurus cDNA clone:E1CA008F04, 5' end, express... 46 2e-07 3
(BX441317) human full-length cDNA 5-PRIME end of clone CS0DF... 50 2e-07 4
(EE220621) LB01255.CR_O22 GC_BGC-12 Bos taurus cDNA clone IM... 46 2e-07 3
(EE216848) LB01239.CR_N20 GC_BGC-12 Bos taurus cDNA clone IM... 46 2e-07 3
(AL559852) human full-length cDNA 5-PRIME end of clone CS0DG... 50 3e-07 4
(EE364271) LB02963.CR_E13 GC_BGC-29 Bos taurus cDNA clone IM... 46 3e-07 3
(CA339626) NISC_ly05b09.y1 NCI_CGAP_Pr32 Rattus norvegicus c... 58 3e-07 2
(EV634986) LB02343.CR_I24 GC_BGC-23 Bos taurus cDNA clone IM... 46 3e-07 3
(DV811064) LB01427.CR_I21 GC_BGC-14 Bos taurus cDNA clone IM... 46 3e-07 3
(AK312992) Homo sapiens cDNA, FLJ93453, Homo sapiens XPA bin... 50 3e-07 4
(DQ896611) Synthetic construct Homo sapiens clone IMAGE:1000... 50 3e-07 4
(DQ893280) Synthetic construct clone IMAGE:100005910; FLH195... 50 3e-07 4
(DV890323) LB02716.CR_L02 GC_BGC-27 Bos taurus cDNA clone IM... 46 3e-07 3
(AK298866) Homo sapiens cDNA FLJ61157 complete cds, highly s... 50 4e-07 4
(DT814799) LB01625.CR_G02 GC_BGC-16 Bos taurus cDNA clone IM... 46 4e-07 3
(DV884028) LB02629.CR_E15 GC_BGC-26 Bos taurus cDNA clone IM... 46 4e-07 3
(AK310340) Homo sapiens cDNA, FLJ17382. 50 6e-07 4
(AK298827) Homo sapiens cDNA FLJ51045 complete cds, highly s... 50 9e-07 4
(CR602623) full-length cDNA clone CS0DK012YG03 of HeLa cells... 50 1e-06 4
(CR617699) full-length cDNA clone CS0DL004YH03 of B cells (R... 50 1e-06 4
(AJ010842) Homo sapiens mRNA for putative ATP(GTP)-binding p... 50 1e-06 4
(CR612976) full-length cDNA clone CS0DI034YM22 of Placenta C... 50 1e-06 4
(BD248759) GTPase associated proteins. 50 1e-06 4
(DD459725) PROCESS. 50 1e-06 4
(CS322744) Sequence 40 from Patent WO2005049829. 50 1e-06 4
(BC007451) Homo sapiens GPN-loop GTPase 1, mRNA (cDNA clone ... 50 1e-06 4
(EA733987) Sequence 2332 from patent US 7368527. 50 1e-06 4
(BD283513) 49 human secreted proteins. 50 1e-06 4
(DJ352640) MPTENS AS MODIFIERS OF THE PTEN/IGF PATHWAY AND M... 50 1e-06 4
(AB044661) Homo sapiens XAB1 mRNA for XPA binding protein 1,... 50 1e-06 4
(BD270058) Secreted proteins and polynucleotides encoding them. 50 1e-06 4
(AB170277) Macaca fascicularis brain cDNA clone: QmoA-10072,... 42 2e-06 5
(BP375932) Homo sapiens cDNA clone: WMC02138, Sugano cDNA li... 50 2e-06 3
(AW020962) df16h09.y1 Morton Fetal Cochlea Homo sapiens cDNA... 50 4e-06 3
(AA448818) zx10h02.r1 Soares_total_fetus_Nb2HF8_9w Homo sapi... 50 5e-06 3
(FC803219) CBGC5636.rev CBGC Lottia gigantea 15h 18h embryos... 46 5e-06 2
(FC803220) CBGC5636.fwd CBGC Lottia gigantea 15h 18h embryos... 46 5e-06 2
(FC713630) CAXY8442.fwd CAXY Lottia gigantea from male gonad... 46 5e-06 2
(CN262371) 17000600177839 GRN_PRENEU Homo sapiens cDNA 5', m... 50 7e-06 3
(DA517210) Homo sapiens cDNA clone FEBRA2005914, 5' end, mRN... 50 7e-06 3
(BQ639599) he17f02.y1 Human Retina cDNA (Un-normalized, unam... 50 7e-06 3
(DA135933) Homo sapiens cDNA clone BRALZ2009047, 5' end, mRN... 50 8e-06 3
(DA688198) Homo sapiens cDNA clone NT2NE2006930, 5' end, mRN... 50 8e-06 3
(CR978467) RZPD Homo sapiens cDNA expression clone RZPDp9017... 50 8e-06 3
(DC357196) Homo sapiens cDNA, clone HEART2008812, 5' end, mR... 50 8e-06 3
(DA130949) Homo sapiens cDNA clone BRALZ2002358, 5' end, mRN... 50 8e-06 3
(DB193230) Homo sapiens cDNA clone TOVAR2001496, 5' end, mRN... 50 8e-06 3
(BP257979) Homo sapiens cDNA clone: HRT02336, Sugano cDNA li... 50 8e-06 3
(DA958570) Homo sapiens cDNA clone SPLEN2038281, 5' end, mRN... 50 8e-06 3
(DA510187) Homo sapiens cDNA clone FCBBF3026909, 5' end, mRN... 50 8e-06 3
(DC425548) Homo sapiens cDNA, clone T1ESE2000774, 5' end, mR... 50 8e-06 3
(AU279449) Homo sapiens cDNA clone:AHMSC2000304, 5'end, expr... 50 8e-06 3
(CA335074) NISC_lt05g01.y1 COGENE 8.5 EPT Homo sapiens cDNA ... 50 8e-06 3
(DC392394) Homo sapiens cDNA, clone STOMA2005065, 5' end, mR... 50 8e-06 3
(DB013900) Homo sapiens cDNA clone TESOP2002564, 5' end, mRN... 50 8e-06 3
(DA954785) Homo sapiens cDNA clone SPLEN2033216, 5' end, mRN... 50 8e-06 3
(DC304706) Homo sapiens cDNA, clone BRACE2029700, 5' end, mR... 50 8e-06 3
(DA697483) Homo sapiens cDNA clone NT2NE2018693, 5' end, mRN... 50 8e-06 3
(DC303211) Homo sapiens cDNA, clone BRACE2012888, 5' end, mR... 50 8e-06 3
(DA362106) Homo sapiens cDNA clone BRSTN2008638, 5' end, mRN... 50 8e-06 3
(BP376888) Homo sapiens cDNA clone: WMC05611, Sugano cDNA li... 50 8e-06 3
(BP291113) Homo sapiens cDNA clone: LNF07623, Sugano cDNA li... 50 8e-06 3
(DA696704) Homo sapiens cDNA clone NT2NE2017730, 5' end, mRN... 50 8e-06 3
(DA588478) Homo sapiens cDNA clone HLUNG2009918, 5' end, mRN... 50 8e-06 3
(DA355263) Homo sapiens cDNA clone BRSTN2000091, 5' end, mRN... 50 8e-06 3
(DA007239) Homo sapiens cDNA clone 3NB692009127, 5' end, mRN... 50 8e-06 3
>(BJ432528) Dictyostelium discoideum cDNA clone:ddv18o24, 3' end,
single read.
Length = 743
Score = 559 bits (282), Expect(4) = 0.0
Identities = 282/282 (100%)
Strand = Plus / Minus
Query: 607 gtaagctaccaatggttgtggcattcaataagatcgatatcaccaatcatcgttttgcag 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gtaagctaccaatggttgtggcattcaataagatcgatatcaccaatcatcgttttgcag 532
Query: 667 aggagtggatgtctgattttgactcttttcaagacgccctcaccaacgatccaacttata 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 aggagtggatgtctgattttgactcttttcaagacgccctcaccaacgatccaacttata 472
Query: 727 tgggcaatttaacaagatcactttcattggttttagaagaattttattcaacacttcaaa 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tgggcaatttaacaagatcactttcattggttttagaagaattttattcaacacttcaaa 412
Query: 787 gtgttggtgtatcagctgttgatggttctggtatcgatgaattctttgaaaagattggtt 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gtgttggtgtatcagctgttgatggttctggtatcgatgaattctttgaaaagattggtt 352
Query: 847 tggccgctcaagattatcataaatactataaggctgaccttg 888
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tggccgctcaagattatcataaatactataaggctgaccttg 310
Score = 303 bits (153), Expect(4) = 0.0
Identities = 153/153 (100%)
Strand = Plus / Minus
Query: 454 attcacatggagtgcatcaggtactatcatcactgaattgatggcatcatcatttccaac 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 attcacatggagtgcatcaggtactatcatcactgaattgatggcatcatcatttccaac 684
Query: 514 tgtattggtatacgttgtcgatacaccacgtaccgttgatcctactaccttcatgtccaa 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tgtattggtatacgttgtcgatacaccacgtaccgttgatcctactaccttcatgtccaa 624
Query: 574 tatgttgtatgcctgtagtataatgtacaagag 606
|||||||||||||||||||||||||||||||||
Sbjct: 623 tatgttgtatgcctgtagtataatgtacaagag 591
Score = 105 bits (53), Expect(4) = 0.0
Identities = 56/57 (98%)
Strand = Plus / Minus
Query: 1043 tatttatgatgatgaagaggatgattatagagatgatcgtgatatggaagattcagg 1099
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 155 tatttatgatgatgaagaggatgattatagagatgatcgtgatatgaaagattcagg 99
Score = 46.1 bits (23), Expect(4) = 0.0
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 1168 caacgtgcatanaatctttaanagttcaa 1196
|||||||||||||||||||||||||||||
Sbjct: 30 caacgtgcatanaatctttaanagttcaa 2
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 886,224,014
Number of extensions: 54057974
Number of successful extensions: 4104977
Number of sequences better than 10.0: 500
Length of query: 1196
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1172
Effective length of database: 97,308,875,965
Effective search space: 114046002630980
Effective search space used: 114046002630980
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.27 |
| Homology vs Protein |
Query= Contig-U10171-1 (Contig-U10171-1Q) /CSM_Contig/Contig-U10171-1Q.Seq.d
(1196 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK073391_1(AK073391|pid:none) Oryza sativa Japonica Group cDNA c... 213 1e-88
AY088472_1(AY088472|pid:none) Arabidopsis thaliana clone 6952 mR... 221 2e-87
BC106338_1(BC106338|pid:none) Xenopus laevis hypothetical protei... 217 2e-87
AF419563_1(AF419563|pid:none) Arabidopsis thaliana AT4g21800/F17... 221 3e-87
(Q9HCN4) RecName: Full=GPN-loop GTPase 1; AltName: Full=XPA-bind... 215 6e-87
BC135391_1(BC135391|pid:none) Xenopus tropicalis hypothetical pr... 215 6e-87
AJ010842_1(AJ010842|pid:none) Homo sapiens mRNA for putative ATP... 215 6e-87
AB170277_1(AB170277|pid:none) Macaca fascicularis brain cDNA clo... 215 8e-87
EU962702_1(EU962702|pid:none) Zea mays clone 244855 XPA-binding ... 207 3e-86
BC161949_1(BC161949|pid:none) Rattus norvegicus similar to XPA b... 216 3e-86
(Q8VCE2) RecName: Full=GPN-loop GTPase 1; AltName: Full=XPA-bind... 216 5e-86
(A4FUD1) RecName: Full=GPN-loop GTPase 1; AltName: Full=XPA-bind... 211 5e-85
AL021890_1(AL021890|pid:none) Arabidopsis thaliana DNA chromosom... 209 6e-84
AE017344_471(AE017344|pid:none) Cryptococcus neoformans var. neo... 221 5e-81
FM992694_221(FM992694|pid:none) Candida dubliniensis CD36 chromo... 204 8e-81
CP000499_647(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 207 2e-80
BT076933_1(BT076933|pid:none) Caligus rogercresseyi clone crog-e... 202 3e-80
AP006852_229(AP006852|pid:none) Candida albicans genomic DNA, ch... 203 6e-80
AE016819_661(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 200 4e-79
AM920437_491(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 204 8e-77
AP007155_900(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 198 1e-76
CR380957_12(CR380957|pid:none) Candida glabrata strain CBS138 ch... 195 4e-76
(P47122) RecName: Full=GTPase NPA3; EC=3.6.-.-; AltName... 196 1e-74
CU928179_81(CU928179|pid:none) Zygosaccharomyces rouxii strain C... 196 8e-74
(P46577) RecName: Full=GPN-loop GTPase 1 homolog; AltName: Full=... 206 1e-71
CU638744_758(CU638744|pid:none) Podospora anserina genomic DNA c... 190 5e-71
FN314711_1(FN314711|pid:none) Schistosoma japonicum isolate Anhu... 194 1e-64
AY811652_1(AY811652|pid:none) Schistosoma japonicum SJCHGC05034 ... 194 1e-64
AM910995_3(AM910995|pid:none) Plasmodium knowlesi strain H chrom... 182 3e-63
AK298827_1(AK298827|pid:none) Homo sapiens cDNA FLJ51045 complet... 135 4e-63
AE014188_15(AE014188|pid:none) Plasmodium falciparum 3D7 chromos... 182 6e-63
AE014298_145(AE014298|pid:none) Drosophila melanogaster chromoso... 179 8e-63
AM999083_1(AM999083|pid:none) Drosophila melanogaster partial CG... 179 8e-63
CP000882_106(CP000882|pid:none) Hemiselmis andersenii chromosome... 181 3e-56
CP000582_297(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 173 2e-55
CR954202_362(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 173 3e-55
AF165818_67(AF165818|pid:none) Guillardia theta nucleomorph chro... 176 1e-52
FN357541_2(FN357541|pid:none) Schistosoma mansoni genome sequenc... 197 8e-49
AM502231_121(AM502231|pid:none) Leishmania infantum chromosome 13. 168 3e-47
AM494950_105(AM494950|pid:none) Leishmania braziliensis chromoso... 169 1e-46
CR940347_123(CR940347|pid:none) Theileria annulata strain Ankara... 173 9e-42
FJ863552_1(FJ863552|pid:none) Anopheles arabiensis isolate FZ14_... 103 4e-39
FJ863551_1(FJ863551|pid:none) Anopheles merus isolate MER_V2A AG... 102 7e-39
AL590442_141(AL590442|pid:none) chromosome II of strain GB-M1 of... 122 1e-36
EF599905_1(EF599905|pid:none) Arabidopsis lyrata subsp. petraea ... 126 5e-32
EF599889_1(EF599889|pid:none) Arabidopsis lyrata subsp. petraea ... 121 2e-30
CP000505_370(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 106 4e-25
BA000023_1018(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 114 1e-24
CP001140_539(CP001140|pid:none) Desulfurococcus kamchatkensis 12... 111 4e-23
CP000575_1218(CP000575|pid:none) Staphylothermus marinus F1, com... 108 4e-22
EU953920_1(EU953920|pid:none) Zea mays clone 1449501 unknown mRNA. 108 5e-22
CP000561_1707(CP000561|pid:none) Pyrobaculum calidifontis JCM 11... 97 4e-21
CP000682_1769(CP000682|pid:none) Metallosphaera sedula DSM 5348,... 105 4e-21
DQ118403_6(DQ118403|pid:none) Uncultured euryarchaeote Alv-FOS1 ... 102 3e-20
CP000493_1376(CP000493|pid:none) Hyperthermus butylicus DSM 5456... 99 2e-19
CP000852_360(CP000852|pid:none) Caldivirga maquilingensis IC-167... 99 3e-19
CP000866_42(CP000866|pid:none) Nitrosopumilus maritimus SCM1, co... 99 3e-19
CP000816_1203(CP000816|pid:none) Ignicoccus hospitalis KIN4/I, c... 96 2e-18
B71105(B71105) hypothetical protein PH0611 - Pyrococcus horikosh... 96 3e-18
CP000968_1374(CP000968|pid:none) Candidatus Korarchaeum cryptofi... 94 9e-18
AL445063_37(AL445063|pid:none) Thermoplasma acidophilum complete... 93 2e-17
CP000504_1911(CP000504|pid:none) Pyrobaculum islandicum DSM 4184... 93 2e-17
AJ248287_202(AJ248287|pid:none) Pyrococcus abyssi complete genom... 92 5e-17
AE009950_484(AE009950|pid:none) Pyrococcus furiosus DSM 3638, co... 90 2e-16
AP006878_952(AP006878|pid:none) Thermococcus kodakarensis KOD1 D... 89 4e-16
BX538352_110(BX538352|pid:none) Cryptosporidium parvum chromosom... 88 5e-16
CP000855_1087(CP000855|pid:none) Thermococcus onnurineus NA1, co... 86 2e-15
A69526(A69526) conserved hypothetical protein AF2209 - Archaeogl... 86 3e-15
BX842634_8(BX842634|pid:none) Neurospora crassa DNA linkage grou... 86 3e-15
AM920431_439(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 85 4e-15
(Q4PF70) RecName: Full=Transcription factor FET5; AltName: Full=... 84 8e-15
FN392319_199(FN392319|pid:none) Pichia pastoris GS115 chromosome... 84 1e-14
(Q5KLN2) RecName: Full=Transcription factor FET5; AltName: Full=... 84 1e-14
A72671(A72671)hypothetical protein APE0791 - Aeropyrum pernix (s... 83 2e-14
(Q6CQA6) RecName: Full=Transcription factor FET5; AltName: Full=... 82 3e-14
BT081096_1(BT081096|pid:none) Caligus clemensi clone ccle-evs-51... 81 6e-14
AE017261_620(AE017261|pid:none) Picrophilus torridus DSM 9790, c... 81 8e-14
CP000882_66(CP000882|pid:none) Hemiselmis andersenii chromosome ... 81 8e-14
CP000505_580(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 80 1e-13
CP000499_237(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 80 1e-13
CP000575_1296(CP000575|pid:none) Staphylothermus marinus F1, com... 80 1e-13
CP000816_794(CP000816|pid:none) Ignicoccus hospitalis KIN4/I, co... 80 1e-13
CU633899_259(CU633899|pid:none) Podospora anserina genomic DNA c... 80 2e-13
(Q54NK8) RecName: Full=GPN-loop GTPase 3 homolog; AltName: Full=... 79 3e-13
AP007157_188(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 79 4e-13
(Q6CBB5) RecName: Full=Transcription factor FET5; AltName: Full=... 78 5e-13
AE014297_575(AE014297|pid:none) Drosophila melanogaster chromoso... 78 7e-13
(Q5A0W6) RecName: Full=Transcription factor FET5; AltName: Full=... 77 9e-13
EF676417_1(EF676417|pid:none) Picea sitchensis clone WS02736_G16... 77 9e-13
AE017356_209(AE017356|pid:none) Cryptococcus neoformans var. neo... 77 1e-12
BT033426_1(BT033426|pid:none) Zea mays full-length cDNA clone ZM... 77 1e-12
AM920436_2046(AM920436|pid:none) Penicillium chrysogenum Wiscons... 76 3e-12
AK242594_1(AK242594|pid:none) Oryza sativa Japonica Group cDNA, ... 75 5e-12
CU928168_504(CU928168|pid:none) Kluyveromyces thermotolerans str... 75 5e-12
(O14443) RecName: Full=Transcription factor fet5; AltName: Full=... 75 6e-12
CR940352_227(CR940352|pid:none) Theileria annulata strain Ankara... 75 6e-12
AP008209_1408(AP008209|pid:none) Oryza sativa (japonica cultivar... 74 8e-12
CP001140_275(CP001140|pid:none) Desulfurococcus kamchatkensis 12... 71 9e-12
CP001324_17(CP001324|pid:none) Micromonas sp. RCC299 chromosome ... 74 1e-11
CR940347_211(CR940347|pid:none) Theileria annulata strain Ankara... 74 1e-11
AE000782_531(AE000782|pid:none) Archaeoglobus fulgidus DSM 4304,... 74 1e-11
(Q54TE7) RecName: Full=GPN-loop GTPase 2 homolog; AltName: Full=... 73 2e-11
CP000585_37(CP000585|pid:none) Ostreococcus lucimarinus CCE9901 ... 73 2e-11
CR382130_799(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 72 3e-11
(Q6ZM63) RecName: Full=GPN-loop GTPase 3; AltName: Full=ATP-bind... 72 3e-11
BC152613_1(BC152613|pid:none) Danio rerio GPN-loop GTPase 3, mRN... 72 4e-11
CP001574_654(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 72 5e-11
BT077343_1(BT077343|pid:none) Lepeophtheirus salmonis clone lsal... 72 5e-11
CU928178_513(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 72 5e-11
AK318899_1(AK318899|pid:none) Arabidopsis thaliana AT4G12790 mRN... 71 7e-11
BT074132_1(BT074132|pid:none) Oncorhynchus mykiss clone omyk-evo... 71 7e-11
BT078995_1(BT078995|pid:none) Esox lucius clone eluc-evq-532-125... 71 9e-11
AK221541_1(AK221541|pid:none) Arabidopsis thaliana mRNA for puta... 70 1e-10
(Q28I42) RecName: Full=GPN-loop GTPase 3; AltName: Full=ATP-bind... 70 1e-10
EF148692_1(EF148692|pid:none) Populus trichocarpa x Populus delt... 70 1e-10
(Q4V7Z0) RecName: Full=GPN-loop GTPase 3; AltName: Full=ATP-bind... 70 1e-10
CR954205_34(CR954205|pid:none) Ostreococcus tauri strain OTTH059... 70 1e-10
(Q9UHW5) RecName: Full=GPN-loop GTPase 3; AltName: Full=ATP-bind... 70 1e-10
(Q6R518) RecName: Full=GPN-loop GTPase 3; AltName: Full=ATP-bind... 70 2e-10
(Q9D3W4) RecName: Full=GPN-loop GTPase 3; AltName: Full=ATP-bind... 70 2e-10
FN357721_11(FN357721|pid:none) Schistosoma mansoni genome sequen... 70 2e-10
AL590447_54(AL590447|pid:none) chromosome VII of strain GB-M1 of... 70 2e-10
BC152270_1(BC152270|pid:none) Danio rerio GPN-loop GTPase 2, mRN... 69 2e-10
AC090882_17(AC090882|pid:none) Oryza sativa chromosome 3 BAC OSJ... 69 2e-10
U97196_2(U97196|pid:none) Caenorhabditis elegans cosmid B0207, c... 69 2e-10
A87790(A87790)protein B0207.6 [imported] - Caenorhabditis elegans 69 2e-10
(Q6PUR6) RecName: Full=GPN-loop GTPase 2; AltName: Full=ATP-bind... 69 2e-10
AK121253_1(AK121253|pid:none) Oryza sativa Japonica Group cDNA c... 69 4e-10
AM475696_5(AM475696|pid:none) Vitis vinifera contig VV78X042996.... 68 6e-10
BT034798_1(BT034798|pid:none) Zea mays full-length cDNA clone ZM... 68 6e-10
(Q9UTL7) RecName: Full=GPN-loop GTPase 2 homolog; AltName: Full=... 68 7e-10
BT075926_1(BT075926|pid:none) Caligus rogercresseyi clone crog-e... 67 9e-10
EU968965_1(EU968965|pid:none) Zea mays clone 325263 ATP binding ... 67 1e-09
AY811371_1(AY811371|pid:none) Schistosoma japonicum SJCHGC03356 ... 66 3e-09
AE014296_2407(AE014296|pid:none) Drosophila melanogaster chromos... 65 4e-09
EU962167_1(EU962167|pid:none) Zea mays clone 240711 ATP binding ... 65 5e-09
CP000881_91(CP000881|pid:none) Hemiselmis andersenii chromosome ... 64 8e-09
AM502244_48(AM502244|pid:none) Leishmania infantum chromosome 26. 62 3e-08
BX537973_1(BX537973|pid:none) Homo sapiens mRNA; cDNA DKFZp686I0... 62 4e-08
AM393009_1(AM393009|pid:none) Synthetic construct Homo sapiens c... 62 4e-08
(Q58DD9) RecName: Full=GPN-loop GTPase 2; AltName: Full=ATP-bind... 61 7e-08
AF117229_1(AF117229|pid:none) Homo sapiens protein x 0004 mRNA, ... 61 9e-08
BC041519_1(BC041519|pid:none) Xenopus laevis hypothetical protei... 61 9e-08
(Q66KF6) RecName: Full=GPN-loop GTPase 2; AltName: Full=ATP-bind... 61 9e-08
AL627228_10(AL627228|pid:none) Mouse DNA sequence from clone RP2... 60 1e-07
(Q5BJ53) RecName: Full=GPN-loop GTPase 2; AltName: Full=ATP-bind... 60 1e-07
(Q8VEJ1) RecName: Full=GPN-loop GTPase 2; AltName: Full=ATP-bind... 60 1e-07
CP000586_16(CP000586|pid:none) Ostreococcus lucimarinus CCE9901 ... 60 2e-07
AM494963_50(AM494963|pid:none) Leishmania braziliensis chromosom... 60 2e-07
AY335563_1(AY335563|pid:none) Synthetic construct Homo sapiens h... 59 3e-07
(Q4R579) RecName: Full=GPN-loop GTPase 2; AltName: Full=ATP-bind... 59 3e-07
BC008634_1(BC008634|pid:none) Homo sapiens GPN-loop GTPase 2, mR... 59 3e-07
DQ213098_1(DQ213098|pid:none) Taeniopygia guttata clone 0058P001... 57 1e-06
AL844509_485(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 57 2e-06
AL627228_11(AL627228|pid:none) Mouse DNA sequence from clone RP2... 57 2e-06
AJ010592_66(AJ010592|pid:none) Guillardia theta DNA for complete... 47 0.001
AM425875_2(AM425875|pid:none) Vitis vinifera contig VV79X000674.... 46 0.002
AM180355_2015(AM180355|pid:none) Clostridium difficile 630 compl... 40 0.12
CP001615_1340(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 40 0.12
CP001114_1130(CP001114|pid:none) Deinococcus deserti VCD115, com... 38 0.24
AY137579_1(AY137579|pid:none) Trypanosoma cruzi TcPolIILSUB RNA ... 39 0.28
AF372503_1(AF372503|pid:none) Trypanosoma cruzi TcPolIILSUA RNA ... 39 0.28
CP000114_1163(CP000114|pid:none) Streptococcus agalactiae A909, ... 39 0.36
AL766849_125(AL766849|pid:none) Streptococcus agalactiae NEM316 ... 39 0.36
AF089737_1(AF089737|pid:none) Streptococcus pyogenes strain Sp11... 38 0.62
CP000462_3676(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 38 0.62
CP000849_289(CP000849|pid:none) Rickettsia bellii OSU 85-389, co... 38 0.81
CP000896_985(CP000896|pid:none) Acholeplasma laidlawii PG-8A, co... 38 0.81
(P53729) RecName: Full=Uncharacterized protein YNR029C; &CS5595... 37 1.1
AM270005_2(AM270005|pid:none) Aspergillus niger contig An02c0100... 37 1.1
CP000542_4283(CP000542|pid:none) Verminephrobacter eiseniae EF01... 37 1.1
(Q16D38) RecName: Full=Translation initiation factor IF-2; &CP0... 37 1.1
(Q3BRP5) RecName: Full=Translation initiation factor IF-2; &AM0... 35 1.1
CR382126_50(CR382126|pid:none) Kluyveromyces lactis strain NRRL ... 37 1.4
CP000868_1104(CP000868|pid:none) Burkholderia multivorans ATCC 1... 37 1.4
(Q1LT42) RecName: Full=Thymidylate kinase; EC=2.7.4.9; ... 37 1.4
(Q8PJ55) RecName: Full=Translation initiation factor IF-2; &AE0... 35 1.4
(Q9RTG5) RecName: Full=Translation initiation factor IF-2; &AE0... 35 1.4
AK022704_1(AK022704|pid:none) Homo sapiens cDNA FLJ12642 fis, cl... 37 1.8
(Q6UWZ7) RecName: Full=BRCA1-A complex subunit Abraxas; AltName:... 37 1.8
AK023676_1(AK023676|pid:none) Homo sapiens cDNA FLJ13614 fis, cl... 37 1.8
AY358576_1(AY358576|pid:none) Homo sapiens clone DNA56410 EGES49... 37 1.8
CP000920_756(CP000920|pid:none) Streptococcus pneumoniae P1031, ... 37 1.8
AP009493_1690(AP009493|pid:none) Streptomyces griseus subsp. gri... 37 1.8
CR382135_819(CR382135|pid:none) Debaryomyces hansenii chromosome... 36 2.3
CP000448_830(CP000448|pid:none) Syntrophomonas wolfei subsp. wol... 36 2.3
(Q7VR23) RecName: Full=Thymidylate kinase; EC=2.7.4.9; ... 36 2.3
CU928166_409(CU928166|pid:none) Kluyveromyces thermotolerans str... 36 2.3
AB2396(AB2396) hypothetical protein all4722 [imported] - Nostoc ... 36 2.3
CR382135_747(CR382135|pid:none) Debaryomyces hansenii strain CBS... 36 2.3
CP000119_226(CP000119|pid:none) Anabaena variabilis ATCC 29413 p... 36 2.3
CP000583_208(CP000583|pid:none) Ostreococcus lucimarinus CCE9901... 33 2.9
CP001150_2561(CP001150|pid:none) Rhodobacter sphaeroides KD131 c... 33 3.0
CP000608_779(CP000608|pid:none) Francisella tularensis subsp. tu... 36 3.1
EF089397_44(EF089397|pid:none) Uncultured marine bacterium EB0_3... 36 3.1
CR522870_2125(CR522870|pid:none) Desulfotalea psychrophila LSv54... 36 3.1
CP000439_903(CP000439|pid:none) Francisella tularensis subsp. no... 36 3.1
(Q96N46) RecName: Full=Tetratricopeptide repeat protein 14; ... 36 3.1
CP000921_1266(CP000921|pid:none) Streptococcus pneumoniae Taiwan... 36 3.1
AY514674_1(AY514674|pid:none) Paralichthys olivaceus phosphoinos... 36 3.1
BA000001_149(BA000001|pid:none) Pyrococcus horikoshii OT3 DNA, c... 36 3.1
(A6QGG8) RecName: Full=Translation initiation factor IF-2; &(A8... 33 3.8
AP009552_3158(AP009552|pid:none) Microcystis aeruginosa NIES-843... 35 4.0
AM778935_38(AM778935|pid:none) Microcystis aeruginosa PCC 7806 g... 35 4.0
CP000551_547(CP000551|pid:none) Prochlorococcus marinus str. AS9... 35 4.0
AE015927_666(AE015927|pid:none) Clostridium tetani E88, complete... 35 4.0
CP000576_518(CP000576|pid:none) Prochlorococcus marinus str. MIT... 35 4.0
EU221238_24(EU221238|pid:none) Uncultured marine group II euryar... 35 4.0
AP006840_2441(AP006840|pid:none) Symbiobacterium thermophilum IA... 35 4.0
(O84561) RecName: Full=Dihydrolipoyl dehydrogenase; EC=... 35 4.0
CP000878_1617(CP000878|pid:none) Prochlorococcus marinus str. MI... 29 4.8
CP000941_182(CP000941|pid:none) Xylella fastidiosa M12, complete... 33 4.9
(Q9PGR3) RecName: Full=Translation initiation factor IF-2; &AE0... 33 4.9
(Q92J55) RecName: Full=Signal recognition particle protein; AltN... 35 5.2
AM180252_812(AM180252|pid:none) Lawsonia intracellularis PHE/MN1... 35 5.2
AE001437_1456(AE001437|pid:none) Clostridium acetobutylicum ATCC... 35 5.2
CP000806_1488(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 35 5.2
AP007169_294(AP007169|pid:none) Aspergillus oryzae RIB40 genomic... 35 5.2
BT078477_1(BT078477|pid:none) Lepeophtheirus salmonis clone lsal... 35 5.2
CP001612_185(CP001612|pid:none) Rickettsia africae ESF-5, comple... 35 5.2
(Q9XEK9) RecName: Full=Translation initiation factor IF-2, chlor... 35 5.2
(B0T167) RecName: Full=Translation initiation factor IF-2; &CP0... 30 6.2
(A7HZ93) RecName: Full=Translation initiation factor IF-2; &CP0... 33 6.3
AE005672_777(AE005672|pid:none) Streptococcus pneumoniae TIGR4, ... 35 6.8
AM494475_1136(AM494475|pid:none) Orientia tsutsugamushi Boryong ... 35 6.8
CR954209_96(CR954209|pid:none) Ostreococcus tauri strain OTTH059... 35 6.8
AE015929_160(AE015929|pid:none) Staphylococcus epidermidis ATCC ... 35 6.8
CR382125_433(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 35 6.8
AF302424_26(AF302424|pid:none) Actinobacillus actinomycetemcomit... 35 6.8
CP000589_91(CP000589|pid:none) Ostreococcus lucimarinus CCE9901 ... 35 6.8
(Q64749) RecName: Full=Maturation protein; AltName: Full=Protein... 35 6.8
(Q2NW23) RecName: Full=Translation initiation factor IF-2; &AP0... 35 6.8
CP000806_1486(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 35 6.8
CP000382_58(CP000382|pid:none) Clostridium novyi NT, complete ge... 35 6.8
AM989989_32(AM989989|pid:none) Zygosaccharomyces rouxii strain C... 35 6.8
AP006878_1185(AP006878|pid:none) Thermococcus kodakarensis KOD1 ... 35 6.8
AE013598_3147(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 32 8.0
CP000967_3410(CP000967|pid:none) Xanthomonas oryzae pv. oryzae P... 32 8.0
(Q4UWA2) RecName: Full=Translation initiation factor IF-2; 32 8.0
(Q5HPS2) RecName: Full=Translation initiation factor IF-2; &(Q8... 32 8.2
(Q2NC10) RecName: Full=Translation initiation factor IF-2; &CP0... 34 8.9
CP001404_1100(CP001404|pid:none) Sulfolobus islandicus Y.N.15.51... 34 8.9
CP001100_399(CP001100|pid:none) Chloroherpeton thalassium ATCC 3... 34 8.9
CP000936_1350(CP000936|pid:none) Streptococcus pneumoniae Hungar... 34 8.9
(Q9PJI3) RecName: Full=Dihydrolipoyl dehydrogenase; EC=... 34 8.9
EU350942_1(EU350942|pid:none) Pasteurella testudinis strain CCUG... 34 8.9
BT080350_1(BT080350|pid:none) Caligus clemensi clone ccle-evs-50... 34 8.9
>AK073391_1(AK073391|pid:none) Oryza sativa Japonica Group cDNA
clone:J033042P15, full insert sequence.
&AP008209_1283(AP008209|pid:none)
Length = 396
Score = 213 bits (542), Expect(2) = 1e-88
Identities = 99/162 (61%), Positives = 126/162 (77%)
Frame = +2
Query: 119 QPINIIVLGMAGSGKTTLLQRIRAHLYENKIPGYIINLDPAVSKLPYTPNIDIRDTVNYK 298
+P+ IIV+GMAG+GKTT + R+ H + + GY++NLDPAV LP+ NIDIRDTV YK
Sbjct: 52 KPVIIIVIGMAGTGKTTFMHRLVCHTQASNMRGYVLNLDPAVMTLPFGANIDIRDTVRYK 111
Query: 299 EVMKQFNLGPNGGIVTSLNLFSTKFDKVLEIVEKRSSSLDYIILDTPGQIEVFTWSASGT 478
EVMK++ LGPNGGI+TSLNLFSTKFD+V+ ++E+R+ LDY+++DTPGQIE+FTWSASG
Sbjct: 112 EVMKEYGLGPNGGILTSLNLFSTKFDEVISVIERRADQLDYVLVDTPGQIEIFTWSASGA 171
Query: 479 IITELMASSFPTVLXXXXXXXXXXXXXXFMSNMLYACSIMYK 604
IITE AS+FPTV+ FMSNMLYACSI+YK
Sbjct: 172 IITEAFASTFPTVVAYVVDTPRSTSPVTFMSNMLYACSILYK 213
Score = 138 bits (348), Expect(2) = 1e-88
Identities = 65/127 (51%), Positives = 90/127 (70%)
Frame = +3
Query: 609 KLPMVVAFNKIDITNHRFAEEWMSDFDSFQDALTNDPTYMGNLTRSLSLVLEEFYSTLQS 788
+LPM++ FNK+D+ H FA EWM DF++FQ AL +D +Y TRSLSLVL+EFY L+S
Sbjct: 215 RLPMILTFNKVDVAKHEFALEWMEDFEAFQTALDSDSSYSSTFTRSLSLVLDEFYKNLRS 274
Query: 789 VGVSAVDGSGIDEFFEKIGLAAQDYHKYYKADLEKIKKQKSDKEQAEANKNWEKLKRDLE 968
VGVSAV G+G++ FFE I +A++Y + Y+ADL+K +K E +N E+L+RD+E
Sbjct: 275 VGVSAVSGAGVNSFFEAIEASAKEYMENYRADLDKRIAEKERLEAERRKENMERLQRDME 334
Query: 969 ESKGAKV 989
SKG V
Sbjct: 335 NSKGQTV 341
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,459,524,293
Number of extensions: 27937460
Number of successful extensions: 124149
Number of sequences better than 10.0: 247
Number of HSP's gapped: 123418
Number of HSP's successfully gapped: 315
Length of query: 398
Length of database: 1,040,966,779
Length adjustment: 131
Effective length of query: 267
Effective length of database: 621,205,444
Effective search space: 165861853548
Effective search space used: 165861853548
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
2 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
1 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |