Contig-U10163-1
Contig ID Contig-U10163-1
Contig update 2002. 9.13
Contig sequence
>Contig-U10163-1 (Contig-U10163-1Q) /CSM_Contig/Contig-U10163-1Q.Seq.d
TTTTTCATAAAATTTTGATCAAACATATTTATTATTATCATTATTGTAGG
TTAGCAGATTGTTTTTGGAAGAAACCAATAATATAGATATAAAAATATGG
ATAAAATTAGTCAAGTTATGAGAAAAATGCCAATTAATGGATTTTCAAAT
AATATAATATCGATGAATCAAAGAAATGGTAAAGCAAGTTATGCAGGTAC
ATGGATTATTCCAAAACCATCATTTGGACAAAAAGCAATGGAAGCACCAT
TTAGACGTGATACAAAATCAGGATGGACAAAAGTTAGTCATCGTGTTGGT
GCAATTGGTAAAAAGGTTGGTATGTTGACAACCTATATTGGTGATATTGC
TTATCCAGTCACAGTGATTCAATTACCAAATAATCAAGTGACACAAATTA
AAAGAAAAGTCAATGATGGTGTTGATATGATTCAAGTTGGTGCCGATGAA
ATTAAATTAAAAAATGTTTCAAAAACATTACAAGGTCATTTCGCAAAAGC
AAATGTACCACCAAAAAGAGTTTTAATGGAATTCCGTGTCACTAGAAATG
CTATGAACTTGGAATTGGGTACTCCAATCTTACCAAAACATTTCTTACCT
GGTCAATTAATCACCGTTAAAGGTACAAACACTGGTAAAGGTTTTGCTGG
TGGTATGAAAAGATGGCATTTCAGGTGGTCAACCTGCAACTCATGGTGTT
TCTTTAACTCATAGAGCAATTGGTTCTACTGGTTGTAGACAAACACCAGG
TAGAGTATTTAAAGGTAGAAAAATGCCAGGTAGATTAGGTGGAAAGAGTT
GTACAGTTAAAAATTTACAAGTACTTAAAATCAATACAGAAATGAATTGT
CTTTTAGTTAAAGGTGCTGTTCCAGGTAAAAAAGGTGGATATTTAAAGAT
CACAGATTCAAGATCAATGAAATGGAAAGAAGCTCCACCTTTCCCAACTT
ATTTCTCAACTTTAGATGATATGATTAAAGATGAGGAATTGGTTTTCAGA
CCAGCAACTAAAGAAACTATTGTTAATTCAAGTGATAAGAAAATCCTTCC
TAAAGTTATTTCATCTGAAGAATGCTATAAATTTAATAAACTTACAAAAA
CAATTAATACAAAGAAGATTTGCAAGAAAACAACAACAACAACAAAATCA
ATAAATTAAATTAAATAAAAAAATAAAAAAATATAAATATAAATAAATAA
TGTTTAGATAATATCTAATTAAATTTTAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Gap no gap
Contig length 1294
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 2179695
End point 2178401
Strand (PLUS/MINUS) MINUS
Number of clones 15
Number of EST 22
Link to clone list U10163
List of clone(s)

est1=VFC453F,-8,467
est2=VFF782E,-2,1164
est3=SFG282F,-1,532
est4=VFA441E,7,1183
est5=VFD527F,7,559
est6=VFJ522F,7,584
est7=VFK473E,7,1152
est8=VFG778F,14,588
est9=VFO847F,17,535
est10=VFI349F,34,577
est11=SLE584F,40,696
est12=SSK805F,41,660
est13=VFB487E,42,1151
est14=VFN643E,108,1172
est15=SFG282Z,495,1180
est16=VFD527Z,537,1210
est17=VFI349Z,600,1189
est18=VFC453Z,605,1146
est19=VFG778Z,609,1164
est20=VFJ522Z,846,1171
est21=VSC140E,862,1167
est22=SSK805Z,1077,1294
Translated Amino Acid sequence
ffikf*snifiiiiivg*qivfgrnq*YRYKNMDKISQVMRKMPINGFSNNIISMNQRNG
KASYAGTWIIPKPSFGQKAMEAPFRRDTKSGWTKVSHRVGAIGKKVGMLTTYIGDIAYPV
TVIQLPNNQVTQIKRKVNDGVDMIQVGADEIKLKNVSKTLQGHFAKANVPPKRVLMEFRV
TRNAMNLELGTPILPKHFLPGQLITVKGTNTGKGFAGGMKRWHFRWSTCNSWCFFNS*sn
wfywl*tntr*si*r*knar*irwkelys*kftst*nqyrnelsfs*rccsr*krwifkd
hrfkinemersstfpnlflnfr*yd*r*gigfqtsn*rnyc*fk**enps*syfi*rml*
i**tyknn*ykedlqennnnnkinkln*ikk*kninink*cldni*lnfkkkkkkkkkkk
kkkkkkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
ffikf*snifiiiiivg*qivfgrnq*YRYKNMDKISQVMRKMPINGFSNNIISMNQRNG
KASYAGTWIIPKPSFGQKAMEAPFRRDTKSGWTKVSHRVGAIGKKVGMLTTYIGDIAYPV
TVIQLPNNQVTQIKRKVNDGVDMIQVGADEIKLKNVSKTLQGHFAKANVPPKRVLMEFRV
TRNAMNLELGTPILPKHFLPGQLITVKGTNTGKGFAGGMKRWHFRWSTCNSWCFFNS*sn
wfywl*tntr*si*r*knar*irwkelys*kftst*nqyrnelsfs*rccsr*krwifkd
hrfkinemersstfpnlflnfr*yd*r*gigfqtsn*rnyc*fk**enps*syfi*rml*
i**tyknn*ykedlqennnnnkinkln*ikk*kninink*cldni*lnfkkkkkkkkkkk
kkkkkkkkkkk


Frame B:
fs*nfdqtylllsll*vsrlfleetnnidikiwiklvkl*ekcqlmdfqii*yr*ikemv
kqvmqvhglfqnhhldkkqwkhhldviqnqdgqklvivlvqlvkrlvc*qpilvilliqs
q*fnyqiik*hklkeksmmvli*fklvpmkln*kmfqkhykvisqkqmyhqkef*wnsvs
leml*twnwvlqsyqnisylvn*splkvqtlvkvllvv*kdgisggqpathgvslthrai
gstgcrqtpgrvfkgrkmpgrlggksctvknlqvlkintemncllvkgavpgkkggylki
tdsrsmkwkeappfptyfstlddmikdeelvfrpatketivnssdkkilpkvisseecyk
fnkltktintkkickktttttksin*ik*knkki*i*innv*iisn*ilkkkkkkkkkkk
kkkkkkkkkkk


Frame C:
fhkilikhiyyyhycrladcfwkkpii*i*kyg*n*ssyeknan*wifk*ynideskkw*
sklcrymdysktiiwtksngsti*t*ykirmdks*sscwcnw*kgwyvdnlyw*yclssh
sdsitk*ssdtn*kksq*wc*ydsswcr*n*ikkcfknitrsfrkskcttkksfngipch
*kcyelgigysnltktfltwsinhr*rykhw*rfcwwyekmafqvvnlqlmvfl*lieql
vllvvdkhqveylkvekcqvd*vervvqlkiykylksiqk*ivf*lkvlfqvkkvdi*rs
qiqdq*ngkklhlsqlisql*mi*lkmrnwfsdqqlkkllliqvirksflklfhlknain
linlqkqliqrrfarkqqqqqnq*iklnkkikkykyk*imfr*ylikf*kkkkkkkkkkk
kkkkkkkkkk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U10163-1 (Contig-U10163-1Q)
/CSM_Contig/Contig-U10163-1Q.Seq.d
(1294 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U10163-1 (Contig-U10163-1Q) /CSM_Contig/Conti... 2167 0.0
Contig-U14683-1 (Contig-U14683-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U14191-1 (Contig-U14191-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U14136-1 (Contig-U14136-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U13416-1 (Contig-U13416-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U09797-1 (Contig-U09797-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U04519-1 (Contig-U04519-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U13415-1 (Contig-U13415-1Q) /CSM_Contig/Conti... 38 0.023
Contig-U13209-1 (Contig-U13209-1Q) /CSM_Contig/Conti... 38 0.023
Contig-U11381-1 (Contig-U11381-1Q) /CSM_Contig/Conti... 38 0.023

>Contig-U10163-1 (Contig-U10163-1Q) /CSM_Contig/Contig-U10163-1Q.Seq.d
Length = 1294

Score = 2167 bits (1093), Expect = 0.0
Identities = 1093/1093 (100%)
Strand = Plus / Plus


Query: 1 tttttcataaaattttgatcaaacatatttattattatcattattgtaggttagcagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttttcataaaattttgatcaaacatatttattattatcattattgtaggttagcagatt 60


Query: 61 gtttttggaagaaaccaataatatagatataaaaatatggataaaattagtcaagttatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtttttggaagaaaccaataatatagatataaaaatatggataaaattagtcaagttatg 120


Query: 121 agaaaaatgccaattaatggattttcaaataatataatatcgatgaatcaaagaaatggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaaaaatgccaattaatggattttcaaataatataatatcgatgaatcaaagaaatggt 180


Query: 181 aaagcaagttatgcaggtacatggattattccaaaaccatcatttggacaaaaagcaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaagcaagttatgcaggtacatggattattccaaaaccatcatttggacaaaaagcaatg 240


Query: 241 gaagcaccatttagacgtgatacaaaatcaggatggacaaaagttagtcatcgtgttggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaagcaccatttagacgtgatacaaaatcaggatggacaaaagttagtcatcgtgttggt 300


Query: 301 gcaattggtaaaaaggttggtatgttgacaacctatattggtgatattgcttatccagtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcaattggtaaaaaggttggtatgttgacaacctatattggtgatattgcttatccagtc 360


Query: 361 acagtgattcaattaccaaataatcaagtgacacaaattaaaagaaaagtcaatgatggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acagtgattcaattaccaaataatcaagtgacacaaattaaaagaaaagtcaatgatggt 420


Query: 421 gttgatatgattcaagttggtgccgatgaaattaaattaaaaaatgtttcaaaaacatta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttgatatgattcaagttggtgccgatgaaattaaattaaaaaatgtttcaaaaacatta 480


Query: 481 caaggtcatttcgcaaaagcaaatgtaccaccaaaaagagttttaatggaattccgtgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caaggtcatttcgcaaaagcaaatgtaccaccaaaaagagttttaatggaattccgtgtc 540


Query: 541 actagaaatgctatgaacttggaattgggtactccaatcttaccaaaacatttcttacct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 actagaaatgctatgaacttggaattgggtactccaatcttaccaaaacatttcttacct 600


Query: 601 ggtcaattaatcaccgttaaaggtacaaacactggtaaaggttttgctggtggtatgaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggtcaattaatcaccgttaaaggtacaaacactggtaaaggttttgctggtggtatgaaa 660


Query: 661 agatggcatttcaggtggtcaacctgcaactcatggtgtttctttaactcatagagcaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agatggcatttcaggtggtcaacctgcaactcatggtgtttctttaactcatagagcaat 720


Query: 721 tggttctactggttgtagacaaacaccaggtagagtatttaaaggtagaaaaatgccagg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tggttctactggttgtagacaaacaccaggtagagtatttaaaggtagaaaaatgccagg 780


Query: 781 tagattaggtggaaagagttgtacagttaaaaatttacaagtacttaaaatcaatacaga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tagattaggtggaaagagttgtacagttaaaaatttacaagtacttaaaatcaatacaga 840


Query: 841 aatgaattgtcttttagttaaaggtgctgttccaggtaaaaaaggtggatatttaaagat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aatgaattgtcttttagttaaaggtgctgttccaggtaaaaaaggtggatatttaaagat 900


Query: 901 cacagattcaagatcaatgaaatggaaagaagctccacctttcccaacttatttctcaac 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 cacagattcaagatcaatgaaatggaaagaagctccacctttcccaacttatttctcaac 960


Query: 961 tttagatgatatgattaaagatgaggaattggttttcagaccagcaactaaagaaactat 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 tttagatgatatgattaaagatgaggaattggttttcagaccagcaactaaagaaactat 1020


Query: 1021 tgttaattcaagtgataagaaaatccttcctaaagttatttcatctgaagaatgctataa 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tgttaattcaagtgataagaaaatccttcctaaagttatttcatctgaagaatgctataa 1080


Query: 1081 atttaataaactt 1093
|||||||||||||
Sbjct: 1081 atttaataaactt 1093


Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus


Query: 1201 tgtttagataatatctaattaaatttt 1227
|||||||||||||||||||||||||||
Sbjct: 1201 tgtttagataatatctaattaaatttt 1227


>Contig-U14683-1 (Contig-U14683-1Q) /CSM_Contig/Contig-U14683-1Q.Seq.d
Length = 1536

Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 511 ccaaaaagagttttaatggaa 531
|||||||||||||||||||||
Sbjct: 829 ccaaaaagagttttaatggaa 849


>Contig-U14191-1 (Contig-U14191-1Q) /CSM_Contig/Contig-U14191-1Q.Seq.d
Length = 1697

Score = 40.1 bits (20), Expect = 0.006
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 89 ataaaaatatggataaaatt 108
||||||||||||||||||||
Sbjct: 347 ataaaaatatggataaaatt 366


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 19,485
Number of Sequences: 6905
Number of extensions: 19485
Number of successful extensions: 2875
Number of sequences better than 10.0: 435
length of query: 1294
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1278
effective length of database: 5,564,391
effective search space: 7111291698
effective search space used: 7111291698
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.18
Homology vs DNA
Query= Contig-U10163-1 (Contig-U10163-1Q) /CSM_Contig/Contig-U10163-1Q.Seq.d
(1294 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU061538) Dictyostelium discoideum slug cDNA, clone SLE584. 1261 0.0 2
(BJ415188) Dictyostelium discoideum cDNA clone:ddv21b20, 5' ... 1221 0.0 1
(BJ410503) Dictyostelium discoideum cDNA clone:ddv12d21, 5' ... 1189 0.0 1
(BJ410625) Dictyostelium discoideum cDNA clone:ddv1b12, 5' e... 1166 0.0 1
(BJ413268) Dictyostelium discoideum cDNA clone:ddv14l19, 5' ... 1126 0.0 1
(BJ417645) Dictyostelium discoideum cDNA clone:ddv28e12, 5' ... 1124 0.0 2
(BJ414696) Dictyostelium discoideum cDNA clone:ddv20k05, 5' ... 1118 0.0 1
(BJ413947) Dictyostelium discoideum cDNA clone:ddv17b13, 5' ... 1078 0.0 1
(BJ411329) Dictyostelium discoideum cDNA clone:ddv3n22, 5' e... 1078 0.0 1
(BJ412397) Dictyostelium discoideum cDNA clone:ddv8e07, 5' e... 1072 0.0 1
(BJ417389) Dictyostelium discoideum cDNA clone:ddv30n12, 5' ... 1029 0.0 1
(BJ433401) Dictyostelium discoideum cDNA clone:ddv21b20, 3' ... 783 0.0 2
(BJ428790) Dictyostelium discoideum cDNA clone:ddv1b12, 3' e... 783 0.0 2
(BJ428667) Dictyostelium discoideum cDNA clone:ddv12d21, 3' ... 783 0.0 2
(BJ400560) Dictyostelium discoideum cDNA clone:dds13c22, 3' ... 783 0.0 2
(BJ429554) Dictyostelium discoideum cDNA clone:ddv3n22, 3' e... 741 0.0 2
(BJ430680) Dictyostelium discoideum cDNA clone:ddv8e07, 3' e... 783 0.0 2
(BJ391412) Dictyostelium discoideum cDNA clone:dds13c22, 5' ... 1013 0.0 2
(BJ411737) Dictyostelium discoideum cDNA clone:ddv5j14, 5' e... 912 0.0 1
(BJ432061) Dictyostelium discoideum cDNA clone:ddv17b13, 3' ... 783 0.0 2
(BJ431627) Dictyostelium discoideum cDNA clone:ddv14l19, 3' ... 783 0.0 2
(BJ429975) Dictyostelium discoideum cDNA clone:ddv5j14, 3' e... 753 0.0 3
(BJ435774) Dictyostelium discoideum cDNA clone:ddv28e12, 3' ... 888 0.0 1
(AU074465) Dictyostelium discoideum slug cDNA, clone SSK805. 476 e-129 1
(AU262361) Dictyostelium discoideum vegetative cDNA clone:VS... 412 e-110 1
(BJ432883) Dictyostelium discoideum cDNA clone:ddv20k05, 3' ... 387 e-103 1
(EK383278) 1095469471397 Global-Ocean-Sampling_GS-31-01-01-1... 46 5e-10 3
(EJ471764) 1095403414358 Global-Ocean-Sampling_GS-28-01-01-1... 54 3e-08 2
(ER455893) 1092963868769 Global-Ocean-Sampling_GS-35-01-01-1... 54 1e-06 2
(EJ256780) 1095349014570 Global-Ocean-Sampling_GS-27-01-01-1... 54 1e-06 2
(EJ627352) 1092963214139 Global-Ocean-Sampling_GS-29-01-01-1... 54 5e-06 2
(EJ641209) 1093011907838 Global-Ocean-Sampling_GS-29-01-01-1... 54 7e-06 2
(EJ577909) 1092960125127 Global-Ocean-Sampling_GS-29-01-01-1... 52 8e-06 4
(EJ558355) 1092959524225 Global-Ocean-Sampling_GS-29-01-01-1... 52 9e-06 4
(EJ900190) 1093018485685 Global-Ocean-Sampling_GS-30-02-01-1... 60 3e-05 2
(AL402665) T3 end of clone AT0AA003G10 of library AT0AA from... 40 6e-05 3
(EJ955208) 1093018968145 Global-Ocean-Sampling_GS-30-02-01-1... 36 6e-05 3
(EJ910319) 1093018534778 Global-Ocean-Sampling_GS-30-02-01-1... 46 8e-05 3
(EJ818956) 1093017528798 Global-Ocean-Sampling_GS-30-02-01-1... 46 9e-05 3
(AL403079) T7 end of clone AT0AA006E01 of library AT0AA from... 40 9e-05 3
(EJ010537) 1095403678225 Global-Ocean-Sampling_GS-26-01-01-1... 50 1e-04 2
(EK316077) 1095462413223 Global-Ocean-Sampling_GS-31-01-01-1... 46 2e-04 2
(EJ530129) 1092955219155 Global-Ocean-Sampling_GS-29-01-01-1... 46 2e-04 2
(EK437932) 1095521106714 Global-Ocean-Sampling_GS-31-01-01-1... 46 2e-04 2
(EJ613810) 1092963004210 Global-Ocean-Sampling_GS-29-01-01-1... 46 2e-04 2
(EK328230) 1095467014517 Global-Ocean-Sampling_GS-31-01-01-1... 46 2e-04 2
(EJ646590) 1092342070374 Global-Ocean-Sampling_GS-30-02-01-1... 46 2e-04 2
(ER444541) 1092963824944 Global-Ocean-Sampling_GS-35-01-01-1... 46 2e-04 2
(ER354069) 1092351008417 Global-Ocean-Sampling_GS-34-01-01-1... 46 2e-04 2
(EK285929) 1095462312546 Global-Ocean-Sampling_GS-31-01-01-1... 46 2e-04 2
(EJ523364) 1092955163125 Global-Ocean-Sampling_GS-29-01-01-1... 46 2e-04 2
(ER519522) 1093015551942 Global-Ocean-Sampling_GS-35-01-01-1... 46 2e-04 2
(EK331552) 1095467025736 Global-Ocean-Sampling_GS-31-01-01-1... 46 2e-04 2
(EK229983) 1095460175465 Global-Ocean-Sampling_GS-31-01-01-1... 46 2e-04 2
(EJ450883) 1093015420959 Global-Ocean-Sampling_GS-28-01-01-1... 46 2e-04 2
(EJ570801) 1092960038337 Global-Ocean-Sampling_GS-29-01-01-1... 46 2e-04 2
(EJ340770) 1092963514214 Global-Ocean-Sampling_GS-28-01-01-1... 46 2e-04 2
(EJ646849) 1092344026422 Global-Ocean-Sampling_GS-30-02-01-1... 46 2e-04 2
(AE006177) Pasteurella multocida subsp. multocida str. Pm70 ... 42 3e-04 3
(ER547707) 1093016193464 Global-Ocean-Sampling_GS-35-01-01-1... 50 3e-04 2
(ER323660) 1092344193568 Global-Ocean-Sampling_GS-34-01-01-1... 44 3e-04 3
(EK493255) 1095505101761 Global-Ocean-Sampling_GS-32-01-01-1... 46 8e-04 2
(EJ021751) 1095448006471 Global-Ocean-Sampling_GS-26-01-01-1... 58 9e-04 1
(EU795286) Uncultured bacterium OMZ60_11F1 genomic sequence. 58 9e-04 1
(EU795268) Uncultured bacterium OMZ60_04I09 genomic sequence. 58 9e-04 1
(EK344977) 1095467332812 Global-Ocean-Sampling_GS-31-01-01-1... 44 0.001 3
(EK378900) 1095469451611 Global-Ocean-Sampling_GS-31-01-01-1... 44 0.001 3
(ER631854) 1093018483190 Global-Ocean-Sampling_GS-36-01-01-2... 54 0.001 2
(EJ670337) 1092955055670 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.001 2
(EJ719395) 1092959442420 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.001 2
(EJ418860) 1093012210937 Global-Ocean-Sampling_GS-28-01-01-1... 52 0.001 2
(EK219385) 1095460135528 Global-Ocean-Sampling_GS-31-01-01-1... 54 0.001 2
(EJ153358) 1092343784578 Global-Ocean-Sampling_GS-27-01-01-1... 54 0.001 2
(EJ389349) 1092963893618 Global-Ocean-Sampling_GS-28-01-01-1... 46 0.001 2
(EJ679279) 1092955114915 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.001 2
(EK514879) 1095515493821 Global-Ocean-Sampling_GS-32-01-01-1... 54 0.001 2
(EK135252) 1093012197708 Global-Ocean-Sampling_GS-31-01-01-1... 54 0.001 2
(EJ639237) 1093010386599 Global-Ocean-Sampling_GS-29-01-01-1... 46 0.001 2
(EJ122993) 1092343381974 Global-Ocean-Sampling_GS-27-01-01-1... 46 0.001 3
(EJ881023) 1093018396643 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.001 2
(EJ343834) 1092963533745 Global-Ocean-Sampling_GS-28-01-01-1... 52 0.001 2
(EJ782225) 1093017285991 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.001 2
(EJ427912) 1093015237265 Global-Ocean-Sampling_GS-28-01-01-1... 52 0.002 2
(EK386883) 1095469486659 Global-Ocean-Sampling_GS-31-01-01-1... 44 0.003 2
(EJ033075) 1095454057626 Global-Ocean-Sampling_GS-26-01-01-1... 42 0.003 2
(CR283599) Oryza sativa cDNA clone:p582a11p5. 46 0.004 2
(EJ589076) 1092961038842 Global-Ocean-Sampling_GS-29-01-01-1... 50 0.004 2
(ER581914) 1093015844965 Global-Ocean-Sampling_GS-36-01-01-2... 50 0.004 2
(EJ487072) 1095403509045 Global-Ocean-Sampling_GS-28-01-01-1... 38 0.004 3
(EJ374107) 1092963734435 Global-Ocean-Sampling_GS-28-01-01-1... 52 0.005 2
(EJ773356) 1092977802410 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.005 2
(ER584573) 1093015861697 Global-Ocean-Sampling_GS-36-01-01-2... 52 0.005 2
(EJ345274) 1092963543014 Global-Ocean-Sampling_GS-28-01-01-1... 52 0.005 2
(EJ742622) 1092962029861 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.005 2
(EJ301876) 1095390032597 Global-Ocean-Sampling_GS-27-01-01-1... 50 0.006 2
(EK081047) 1092961104831 Global-Ocean-Sampling_GS-31-01-01-1... 52 0.006 2
(CL958208) OsIFCC001020 Oryza sativa Express Library Oryza s... 46 0.006 2
(EJ114069) 1092343254982 Global-Ocean-Sampling_GS-27-01-01-1... 52 0.006 2
(AK101781) Oryza sativa Japonica Group cDNA clone:J033064P19... 46 0.007 2
(AK073778) Oryza sativa Japonica Group cDNA clone:J033070D07... 46 0.008 2

>(AU061538) Dictyostelium discoideum slug cDNA, clone SLE584.
Length = 657

Score = 1261 bits (636), Expect(2) = 0.0
Identities = 636/636 (100%)
Strand = Plus / Plus


Query: 39 cattattgtaggttagcagattgtttttggaagaaaccaataatatagatataaaaatat 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cattattgtaggttagcagattgtttttggaagaaaccaataatatagatataaaaatat 60


Query: 99 ggataaaattagtcaagttatgagaaaaatgccaattaatggattttcaaataatataat 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggataaaattagtcaagttatgagaaaaatgccaattaatggattttcaaataatataat 120


Query: 159 atcgatgaatcaaagaaatggtaaagcaagttatgcaggtacatggattattccaaaacc 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcgatgaatcaaagaaatggtaaagcaagttatgcaggtacatggattattccaaaacc 180


Query: 219 atcatttggacaaaaagcaatggaagcaccatttagacgtgatacaaaatcaggatggac 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcatttggacaaaaagcaatggaagcaccatttagacgtgatacaaaatcaggatggac 240


Query: 279 aaaagttagtcatcgtgttggtgcaattggtaaaaaggttggtatgttgacaacctatat 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaagttagtcatcgtgttggtgcaattggtaaaaaggttggtatgttgacaacctatat 300


Query: 339 tggtgatattgcttatccagtcacagtgattcaattaccaaataatcaagtgacacaaat 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tggtgatattgcttatccagtcacagtgattcaattaccaaataatcaagtgacacaaat 360


Query: 399 taaaagaaaagtcaatgatggtgttgatatgattcaagttggtgccgatgaaattaaatt 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taaaagaaaagtcaatgatggtgttgatatgattcaagttggtgccgatgaaattaaatt 420


Query: 459 aaaaaatgtttcaaaaacattacaaggtcatttcgcaaaagcaaatgtaccaccaaaaag 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaaaatgtttcaaaaacattacaaggtcatttcgcaaaagcaaatgtaccaccaaaaag 480


Query: 519 agttttaatggaattccgtgtcactagaaatgctatgaacttggaattgggtactccaat 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agttttaatggaattccgtgtcactagaaatgctatgaacttggaattgggtactccaat 540


Query: 579 cttaccaaaacatttcttacctggtcaattaatcaccgttaaaggtacaaacactggtaa 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cttaccaaaacatttcttacctggtcaattaatcaccgttaaaggtacaaacactggtaa 600


Query: 639 aggttttgctggtggtatgaaaagatggcatttcag 674
||||||||||||||||||||||||||||||||||||
Sbjct: 601 aggttttgctggtggtatgaaaagatggcatttcag 636

Score = 44.1 bits (22), Expect(2) = 0.0
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 675 gtggtcaacctgcaactcatgg 696
||||||||||||||||||||||
Sbjct: 636 gtggtcaacctgcaactcatgg 657

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,431,740,662
Number of extensions: 88709461
Number of successful extensions: 7796015
Number of sequences better than 10.0: 323
Length of query: 1294
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1270
Effective length of database: 97,308,875,965
Effective search space: 123582272475550
Effective search space used: 123582272475550
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.27
Homology vs Protein
Query= Contig-U10163-1 (Contig-U10163-1Q) /CSM_Contig/Contig-U10163-1Q.Seq.d
(1294 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(A9W4Q1) RecName: Full=50S ribosomal protein L3; &CP000908_2128... 112 3e-46
CP001029_2089(CP001029|pid:none) Methylobacterium populi BJ001, ... 112 3e-46
(Q5LLU6) RecName: Full=50S ribosomal protein L3; &CP000031_3740... 113 9e-46
(Q5NQ64) RecName: Full=50S ribosomal protein L3; &AE008692_517(... 115 2e-45
(Q2W2J1) RecName: Full=50S ribosomal protein L3; &AP007255_3130... 115 2e-45
(Q9A8V3) RecName: Full=50S ribosomal protein L3; 114 4e-45
(Q0ANQ0) RecName: Full=50S ribosomal protein L3; &CP000449_1791... 108 5e-45
CP000699_1345(CP000699|pid:none) Sphingomonas wittichii RW1, com... 106 6e-45
CP001349_1845(CP001349|pid:none) Methylobacterium nodulans ORS 2... 107 1e-44
(B1LWS6) RecName: Full=50S ribosomal protein L3; &CP001001_2186... 107 2e-44
(B6IRQ6) RecName: Full=50S ribosomal protein L3; &CP000613_689(... 105 4e-44
(Q2G8Y0) RecName: Full=50S ribosomal protein L3; &CP000248_1244... 110 7e-44
BT034053_1(BT034053|pid:none) Zea mays full-length cDNA clone ZM... 103 9e-44
EU963704_1(EU963704|pid:none) Zea mays clone 266187 50S ribosoma... 102 1e-43
EF147186_1(EF147186|pid:none) Populus trichocarpa clone WS01228_... 108 2e-43
CP000661_2510(CP000661|pid:none) Rhodobacter sphaeroides ATCC 17... 106 2e-42
(Q0BUQ0) RecName: Full=50S ribosomal protein L3; &CP000394_554(... 109 3e-42
(B0T2C2) RecName: Full=50S ribosomal protein L3; &CP000927_1605... 103 8e-42
(A5FZW5) RecName: Full=50S ribosomal protein L3; &CP000697_1918... 105 8e-42
(B3QBY0) RecName: Full=50S ribosomal protein L3; &(P60456) RecN... 100 2e-41
CP001389_1169(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 104 4e-41
(Q5FTY3) RecName: Full=50S ribosomal protein L3; &CP000009_364(... 105 4e-41
(Q0VSK3) RecName: Full=50S ribosomal protein L3; &AM286690_397(... 101 4e-41
AM476305_2(AM476305|pid:none) Vitis vinifera contig VV78X140621.... 102 6e-41
(Q11HQ2) RecName: Full=50S ribosomal protein L3; &CP000390_1668... 99 8e-41
(A9H3R5) RecName: Full=50S ribosomal protein L3; &AM889285_3404... 108 1e-40
(A6U859) RecName: Full=50S ribosomal protein L3; &CP000738_979(... 102 2e-40
(Q2K9L6) RecName: Full=50S ribosomal protein L3; &CP000133_1648... 103 2e-40
(B6JET3) RecName: Full=50S ribosomal protein L3; &CP001196_1653... 97 3e-40
(Q07KL8) RecName: Full=50S ribosomal protein L3; &CP000463_3555... 96 3e-40
(A5ELM7) RecName: Full=50S ribosomal protein L3; &CP000494_4766... 96 3e-40
(B5ZYT5) RecName: Full=50S ribosomal protein L3; &CP001191_1323... 102 3e-40
CP001074_1721(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 102 3e-40
(Q487Z3) RecName: Full=50S ribosomal protein L3; &CP000083_840(... 101 3e-40
(Q6G2W5) RecName: Full=50S ribosomal protein L3; &BX897699_1024... 103 5e-40
CP001016_1335(CP001016|pid:none) Beijerinckia indica subsp. indi... 100 5e-40
(Q2IXR0) RecName: Full=50S ribosomal protein L3; &CP000250_2288... 95 7e-40
(Q2YM03) RecName: Full=50S ribosomal protein L3; &(Q57CQ8) RecN... 99 9e-40
(A5VR06) RecName: Full=50S ribosomal protein L3; &(A9M5Q0) RecN... 99 9e-40
(Q8G076) RecName: Full=50S ribosomal protein L3; &AE014291_1199... 99 9e-40
(Q2RQW0) RecName: Full=50S ribosomal protein L3; &CP000230_2680... 102 9e-40
(A4XZ90) RecName: Full=50S ribosomal protein L3; &CP000680_3881... 102 9e-40
(Q8UE18) RecName: Full=50S ribosomal protein L3; &AE007869_1905... 105 1e-39
(Q7MYF1) RecName: Full=50S ribosomal protein L3; &BX571874_267(... 100 1e-39
CP001280_567(CP001280|pid:none) Methylocella silvestris BL2, com... 99 2e-39
(A7IFY1) RecName: Full=50S ribosomal protein L3; &CP000781_1665... 94 3e-39
(B2HZM2) RecName: Full=50S ribosomal protein L3; &CP000863_3278... 97 3e-39
CP000633_1351(CP000633|pid:none) Agrobacterium vitis S4 chromoso... 101 4e-39
(Q9LRN8) RecName: Full=50S ribosomal protein L3-2, chloroplastic... 97 6e-39
(B0U0Y9) RecName: Full=50S ribosomal protein L3; &CP000937_582(... 100 6e-39
(Q0ABH5) RecName: Full=50S ribosomal protein L3; &CP000453_453(... 94 1e-38
(Q6F7R2) RecName: Full=50S ribosomal protein L3; &CR543861_2902... 97 1e-38
(Q2NQM2) RecName: Full=50S ribosomal protein L3; &AP008232_2278... 97 1e-38
(Q4ZMP4) RecName: Full=50S ribosomal protein L3; &CP000075_4547... 97 1e-38
(Q889X1) RecName: Full=50S ribosomal protein L3; &AE016853_609(... 97 2e-38
AP009384_2554(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 93 2e-38
(A8IAS6) RecName: Full=50S ribosomal protein L3; 93 2e-38
(Q98N57) RecName: Full=50S ribosomal protein L3; &BA000012_225(... 99 2e-38
CU468135_3164(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 98 2e-38
(Q3K5Y8) RecName: Full=50S ribosomal protein L3; &CP000094_5074... 96 2e-38
FN392320_1076(FN392320|pid:none) Pichia pastoris GS115 chromosom... 97 3e-38
(A1USL4) RecName: Full=50S ribosomal protein L3; &CP000524_628(... 99 3e-38
(Q211E8) RecName: Full=50S ribosomal protein L3; &CP000301_3409... 92 3e-38
(Q48D36) RecName: Full=50S ribosomal protein L3; &CP000058_4394... 97 3e-38
(Q9CL32) RecName: Full=50S ribosomal protein L3; &AE004439_1415... 97 3e-38
AM181176_5409(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 96 4e-38
AE015451_450(AE015451|pid:none) Pseudomonas putida KT2440 comple... 96 6e-38
CP001339_2299(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, ... 96 8e-38
(A1AGK7) RecName: Full=50S ribosomal protein L3; &(A7ZSK9) RecN... 97 8e-38
(Q1IFW6) RecName: Full=50S ribosomal protein L3; &CT573326_439(... 96 8e-38
(Q7VKD2) RecName: Full=50S ribosomal protein L3; &AE017143_1676... 97 8e-38
(A7MWI3) RecName: Full=50S ribosomal protein L3; &CP000789_670(... 94 1e-37
(A5EX82) RecName: Full=50S ribosomal protein L3; &CP000513_1211... 97 1e-37
CP001277_1681(CP001277|pid:none) Candidatus Hamiltonella defensa... 101 2e-37
(A3N358) RecName: Full=50S ribosomal protein L3; &CP000569_1736... 96 2e-37
CP001576_83(CP001576|pid:none) Micromonas sp. RCC299 chromosome ... 91 2e-37
(A7MPI7) RecName: Full=50S ribosomal protein L3; &CP000783_2(CP... 94 2e-37
(A1S218) RecName: Full=50S ribosomal protein L3; &CP000507_212(... 94 3e-37
(B6EPS5) RecName: Full=50S ribosomal protein L3; &FM178379_320(... 91 3e-37
(A6VLI8) RecName: Full=50S ribosomal protein L3; &CP000746_453(... 95 3e-37
(A5WCJ0) RecName: Full=50S ribosomal protein L3; &CP000713_421(... 91 4e-37
(Q14JC0) RecName: Full=50S ribosomal protein L3; &(Q5NHW8) RecN... 94 4e-37
(A0Q4I3) RecName: Full=50S ribosomal protein L3; &(A4IZT4) RecN... 94 4e-37
(A9MN46) RecName: Full=50S ribosomal protein L3; &CP000880_4022... 96 7e-37
CP000020_230(CP000020|pid:none) Vibrio fischeri ES114 chromosome... 92 7e-37
(Q65QV5) RecName: Full=50S ribosomal protein L3; &AE016827_2048... 93 9e-37
AC140027_3(AC140027|pid:none) Medicago truncatula clone mth2-5m2... 92 1e-36
(Q8DE39) RecName: Full=50S ribosomal protein L3; &AE016795_725(... 91 1e-36
CP001142_97(CP001142|pid:none) Phaeodactylum tricornutum CCAP 10... 97 1e-36
CP001103_443(CP001103|pid:none) Alteromonas macleodii 'Deep ecot... 97 1e-36
(Q1H4N7) RecName: Full=50S ribosomal protein L3; &CP000284_279(... 93 1e-36
(Q7MPI8) RecName: Full=50S ribosomal protein L3; &BA000037_375(... 91 1e-36
AC124951_13(AC124951|pid:none) Medicago truncatula clone mth2-7p... 90 2e-36
(Q6LVB6) RecName: Full=50S ribosomal protein L3; &CR378663_304(... 91 3e-36
(Q1QDI6) RecName: Full=50S ribosomal protein L3; &CP000323_483(... 91 3e-36
(Q21M57) RecName: Full=50S ribosomal protein L3; &CP000282_958(... 89 4e-36
(Q0BYB4) RecName: Full=50S ribosomal protein L3; &CP000158_2795... 92 6e-36
(Q9SKX4) RecName: Full=50S ribosomal protein L3-1, chloroplastic... 88 9e-36
AY085287_1(AY085287|pid:none) Arabidopsis thaliana clone 142861 ... 88 9e-36
(A1TYJ7) RecName: Full=50S ribosomal protein L3; &CP000514_708(... 89 1e-35
(B7J467) RecName: Full=50S ribosomal protein L3; &CP001132_489(... 88 1e-35
(A9BPR8) RecName: Full=50S ribosomal protein L3; &CP000884_390(... 98 2e-35
(A4ST06) RecName: Full=50S ribosomal protein L3; &CP000644_3811... 89 2e-35
(Q12GX1) RecName: Full=50S ribosomal protein L3; &CP000316_254(... 99 2e-35
(B1Y8I7) RecName: Full=50S ribosomal protein L3; &CP001013_3977... 93 3e-35
(Q8DMN1) RecName: Full=50S ribosomal protein L3; &BA000039_81(B... 92 3e-35
(A1W2Q7) RecName: Full=50S ribosomal protein L3; &CP000539_276(... 93 4e-35
(A8G1E8) RecName: Full=50S ribosomal protein L3; &CP000821_4308... 88 4e-35
(Q1LI37) RecName: Full=50S ribosomal protein L3; &CP000352_3303... 91 5e-35
(A3Q982) RecName: Full=50S ribosomal protein L3; &CP000606_157(... 88 5e-35
(A0KRM4) RecName: Full=50S ribosomal protein L3; &(Q0HNT7) RecN... 87 5e-35
(Q8R7V4) RecName: Full=50S ribosomal protein L3; &AE008691_2118... 87 6e-35
(Q3J8R4) RecName: Full=50S ribosomal protein L3; &CP000127_2228... 89 8e-35
(A3DA72) RecName: Full=50S ribosomal protein L3; &(A6WHS8) RecN... 89 8e-35
(Q8K950) RecName: Full=50S ribosomal protein L3; &AE013218_476(... 87 8e-35
(A8GYX6) RecName: Full=50S ribosomal protein L3; &CP000851_184(... 89 1e-34
(Q12SV9) RecName: Full=50S ribosomal protein L3; &CP000302_170(... 88 1e-34
(Q089Q4) RecName: Full=50S ribosomal protein L3; &CP000447_148(... 87 1e-34
(Q3MFC1) RecName: Full=50S ribosomal protein L3; &CP000117_689(... 89 1e-34
(Q31IY2) RecName: Full=50S ribosomal protein L3; &CP000109_294(... 88 1e-34
(B6J5D2) RecName: Full=50S ribosomal protein L3; &CP001020_386(... 93 2e-34
(Q0K619) RecName: Full=50S ribosomal protein L3; &AM260479_3400... 91 2e-34
(A0L5X3) RecName: Full=50S ribosomal protein L3; &CP000471_837(... 98 2e-34
(A9BHA5) RecName: Full=50S ribosomal protein L3; &CP000879_765(... 97 2e-34
(B0JI03) RecName: Full=50S ribosomal protein L3; &AP009552_5742... 92 2e-34
(Q3SLP9) RecName: Full=50S ribosomal protein L3; &CP000116_405(... 90 2e-34
CP000916_993(CP000916|pid:none) Thermotoga neapolitana DSM 4359,... 92 2e-34
(Q8YPH9) RecName: Full=50S ribosomal protein L3; &AH2332(AH2332... 88 2e-34
(A9NAM4) RecName: Full=50S ribosomal protein L3; &(B6J263) RecN... 93 2e-34
(B0TM12) RecName: Full=50S ribosomal protein L3; &CP000931_4098... 88 2e-34
(A1REB4) RecName: Full=50S ribosomal protein L3; &(A4YBY3) RecN... 87 2e-34
CR954220_34(CR954220|pid:none) Ostreococcus tauri strain OTTH059... 91 3e-34
(Q2YAZ7) RecName: Full=50S ribosomal protein L3; &CP000103_765(... 92 3e-34
(Q30Z42) RecName: Full=50S ribosomal protein L3; &CP000112_2253... 91 3e-34
(Q2LQA1) RecName: Full=50S ribosomal protein L3; &CP000252_301(... 88 4e-34
(Q46WE4) RecName: Full=50S ribosomal protein L3; &CP000090_3157... 90 4e-34
(B7KHY7) RecName: Full=50S ribosomal protein L3; &CP001291_3610... 87 4e-34
CU928167_77(CU928167|pid:none) Kluyveromyces thermotolerans stra... 88 5e-34
(A5IHR4) RecName: Full=50S ribosomal protein L3; &(Q5X859) RecN... 87 5e-34
(B1KMY3) RecName: Full=50S ribosomal protein L3; &CP000961_4639... 86 5e-34
(A3P0B3) RecName: Full=50S ribosomal protein L3; &CP000572_3749... 90 9e-34
(Q2SU27) RecName: Full=50S ribosomal protein L3; &CP000086_3012... 90 9e-34
(Q0AIJ5) RecName: Full=50S ribosomal protein L3; &CP000450_538(... 93 9e-34
(Q4FUF6) RecName: Full=50S ribosomal protein L3; &CP000082_489(... 86 9e-34
CR380948_87(CR380948|pid:none) Candida glabrata strain CBS138 ch... 86 1e-33
(A9ADJ3) RecName: Full=50S ribosomal protein L3; &AP009385_2948... 89 1e-33
(A6TWI2) RecName: Full=50S ribosomal protein L3; &CP000724_4307... 94 1e-33
CP001158_480(CP001158|pid:none) Buchnera aphidicola str. Tuc7 (A... 84 1e-33
(P57591) RecName: Full=50S ribosomal protein L3; &A84991(A84991... 84 1e-33
(A6MW01) RecName: Full=50S ribosomal protein L3, chloroplastic; ... 90 1e-33
EF082526_1(EF082526|pid:none) Picea sitchensis clone WS02725_D20... 88 1e-33
BT043236_1(BT043236|pid:none) Zea mays full-length cDNA clone ZM... 86 2e-33
BT039474_1(BT039474|pid:none) Zea mays full-length cDNA clone ZM... 86 2e-33
(Q3B6G1) RecName: Full=50S ribosomal protein L3; &CP000096_178(... 88 2e-33
CP001393_1673(CP001393|pid:none) Anaerocellum thermophilum DSM 6... 84 2e-33
CR382125_694(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 86 2e-33
CP000599_33(CP000599|pid:none) Ostreococcus lucimarinus CCE9901 ... 89 2e-33
CP001110_263(CP001110|pid:none) Pelodictyon phaeoclathratiforme ... 88 2e-33
(Q2L2G0) RecName: Full=50S ribosomal protein L3; &AM167904_25(A... 88 3e-33
(Q13TH0) RecName: Full=50S ribosomal protein L3; &CP000270_4081... 89 3e-33
(B1VET6) RecName: Full=50S ribosomal protein L3; &AM942444_315(... 84 3e-33
(A4JAP0) RecName: Full=50S ribosomal protein L3; &(Q0BJ46) RecN... 86 3e-33
(Q39KG7) RecName: Full=50S ribosomal protein L3; &CP000151_266(... 86 3e-33
CR382132_426(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 90 4e-33
(O66431) RecName: Full=50S ribosomal protein L3; &AE000657_4(AE... 97 4e-33
(A8GVB4) RecName: Full=50S ribosomal protein L3; &(Q1RHM1) RecN... 89 4e-33
EU168190_146(EU168190|pid:none) Heterosigma akashiwo strain NIES... 91 4e-33
(B7IHU6) RecName: Full=50S ribosomal protein L3; &CP001185_1185... 91 4e-33
AY860112_6(AY860112|pid:none) Micromonospora sp. ATCC 39149 RpsL... 84 5e-33
(A0K3M5) RecName: Full=50S ribosomal protein L3; &(Q1BRU8) RecN... 86 5e-33
(B1JU22) RecName: Full=50S ribosomal protein L3; &(B4E5C0) RecN... 86 5e-33
(A6LLL3) RecName: Full=50S ribosomal protein L3; &CP000716_932(... 89 7e-33
(Q5Z1W3) RecName: Full=50S ribosomal protein L3; &AP006618_739(... 84 9e-33
CP001101_2211(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 86 9e-33
(B2I8G9) RecName: Full=50S ribosomal protein L3; &(Q87E82) RecN... 83 1e-32
(Q47JA3) RecName: Full=50S ribosomal protein L3; &CP000089_319(... 92 1e-32
CP001011_422(CP001011|pid:none) Xylella fastidiosa M23, complete... 82 2e-32
AM920435_20(AM920435|pid:none) Penicillium chrysogenum Wisconsin... 85 2e-32
AP008208_250(AP008208|pid:none) Oryza sativa (japonica cultivar-... 85 2e-32
(A9IJ01) RecName: Full=50S ribosomal protein L3; &AM902716_4973... 86 2e-32
(Q9PE76) RecName: Full=50S ribosomal protein L3; 83 2e-32
(B0U5A7) RecName: Full=50S ribosomal protein L3; &CP000941_449(... 82 2e-32
(A1KB27) RecName: Full=50S ribosomal protein L3; 92 2e-32
CP000806_4009(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 82 2e-32
(B0K5P3) RecName: Full=50S ribosomal protein L3; &CP000923_845(... 83 2e-32
AE017345_277(AE017345|pid:none) Cryptococcus neoformans var. neo... 89 3e-32
(A0LRM0) RecName: Full=50S ribosomal protein L3; &CP000481_304(... 84 3e-32
(Q89A68) RecName: Full=50S ribosomal protein L3; &AE016826_429(... 88 3e-32
(Q3A9R6) RecName: Full=50S ribosomal protein L3; &CP000141_2246... 92 3e-32
(B7K335) RecName: Full=50S ribosomal protein L3; &CP001287_248(... 87 3e-32
(A8MLE0) RecName: Full=50S ribosomal protein L3; &CP000853_484(... 87 3e-32
(A8GPF0) RecName: Full=50S ribosomal protein L3; &CP000847_938(... 87 4e-32
(A9M3W6) RecName: Full=50S ribosomal protein L3; &CP000381_1911... 90 4e-32
(O24689) RecName: Full=50S ribosomal protein L3; &(Q31L07) RecN... 86 4e-32
(A0T0X2) RecName: Full=50S ribosomal protein L3, chloroplastic; ... 83 4e-32
(Q1MPR3) RecName: Full=50S ribosomal protein L3; &AM180252_959(... 92 6e-32
(Q0S3H6) RecName: Full=50S ribosomal protein L3; &AP011115_6186... 81 1e-31
AM270062_21(AM270062|pid:none) Aspergillus niger contig An04c001... 86 1e-31
AP008957_1852(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 81 1e-31
(A6W5T8) RecName: Full=50S ribosomal protein L3; &CP000750_685(... 86 2e-31
(A9WH66) RecName: Full=50S ribosomal protein L3; &CP000909_2320... 87 2e-31
CP001337_2931(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 87 2e-31
(Q057A4) RecName: Full=50S ribosomal protein L3; &AY744382_30(A... 82 2e-31
(A8M529) RecName: Full=50S ribosomal protein L3; &CP000850_4160... 82 2e-31
(Q0AUI0) RecName: Full=50S ribosomal protein L3; &CP000448_2265... 88 2e-31
BT057077_1(BT057077|pid:none) Salmo salar clone ssal-evf-520-198... 90 3e-31
CP000555_3434(CP000555|pid:none) Methylibium petroleiphilum PM1,... 87 3e-31
(A2SLF7) RecName: Full=50S ribosomal protein L3; 87 3e-31
(A9WSV9) RecName: Full=50S ribosomal protein L3; &CP000910_2137... 88 3e-31
(A1T4N9) RecName: Full=50S ribosomal protein L3; &CP000511_1288... 80 3e-31
(A1R8U5) RecName: Full=50S ribosomal protein L3; &CP000474_2824... 90 3e-31
(A0QL18) RecName: Full=50S ribosomal protein L3; &(Q73SB3) RecN... 80 3e-31
(Q9L0E0) RecName: Full=50S ribosomal protein L3; &AL939121_49(A... 86 3e-31
CP001010_47(CP001010|pid:none) Polynucleobacter necessarius subs... 86 4e-31
(A4XBP6) RecName: Full=50S ribosomal protein L3; &CP000667_3868... 82 4e-31
(A4T1U2) RecName: Full=50S ribosomal protein L3; &CP000656_5019... 80 4e-31
(Q83FY6) RecName: Full=50S ribosomal protein L3; &(Q83I78) RecN... 81 4e-31
(Q0RRS1) RecName: Full=50S ribosomal protein L3; &CT573213_1048... 88 5e-31
CP001612_779(CP001612|pid:none) Rickettsia africae ESF-5, comple... 86 6e-31
(B2FQ45) RecName: Full=50S ribosomal protein L3; &AM743169_857(... 81 6e-31
CP001099_175(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ... 81 6e-31
(P51314) RecName: Full=50S ribosomal protein L3, chloroplastic; ... 81 6e-31
(Q92GW6) RecName: Full=50S ribosomal protein L3; &AE006914_1006... 86 8e-31
(A8GT69) RecName: Full=50S ribosomal protein L3; &(B0BUR0) RecN... 86 8e-31
(P48952) RecName: Full=50S ribosomal protein L3; &A71672(A71672... 86 8e-31
(Q3BWY3) RecName: Full=50S ribosomal protein L3; &(Q8PNS4) RecN... 80 8e-31
CP001154_252(CP001154|pid:none) Laribacter hongkongensis HLHK9, ... 86 8e-31
(A5N4P7) RecName: Full=50S ribosomal protein L3; &AP009049_183(... 81 8e-31
(Q2JFH6) RecName: Full=50S ribosomal protein L3; &CP000249_571(... 87 1e-30
(Q68W78) RecName: Full=50S ribosomal protein L3; &AE017197_624(... 86 1e-30
(A1WVC2) RecName: Full=50S ribosomal protein L3; &CP000544_839(... 80 1e-30
(B0RU82) RecName: Full=50S ribosomal protein L3; &(Q4URD9) RecN... 80 1e-30
(A0QSD1) RecName: Full=50S ribosomal protein L3; &CP000480_1396... 79 1e-30
(A9KJJ4) RecName: Full=50S ribosomal protein L3; &CP000885_3623... 79 1e-30
(Q3AMN0) RecName: Full=50S ribosomal protein L3; &CP000110_370(... 82 1e-30
(A1VEB6) RecName: Full=50S ribosomal protein L3; &(Q72CI0) RecN... 84 1e-30
(Q4L8B4) RecName: Full=50S ribosomal protein L3; &AP006716_802(... 82 2e-30
(Q0ID05) RecName: Full=50S ribosomal protein L3; &CP000435_428(... 82 2e-30
(A1UBN6) RecName: Full=50S ribosomal protein L3; &(A3PVC1) RecN... 81 2e-30
(A1KGI2) RecName: Full=50S ribosomal protein L3; &(A5U087) RecN... 80 2e-30
(A3DJH2) RecName: Full=50S ribosomal protein L3; &CP000568_2859... 86 2e-30
(Q8FS80) RecName: Full=50S ribosomal protein L3; &BA000035_522(... 83 2e-30
(A2C4Z9) RecName: Full=50S ribosomal protein L3; &CP000553_1996... 81 2e-30
CP001213_358(CP001213|pid:none) Bifidobacterium animalis subsp. ... 92 2e-30
Y13228_2(Y13228|pid:none) Mycobacterium bovis BCG DNA for riboso... 80 2e-30
(Q49ZG8) RecName: Full=50S ribosomal protein L3; &AP008934_663(... 84 3e-30
(A5CUB3) RecName: Full=50S ribosomal protein L3; &AM711867_2645... 82 3e-30
(A8G762) RecName: Full=50S ribosomal protein L3; &CP000825_1825... 82 3e-30
(A2BYT6) RecName: Full=50S ribosomal protein L3; &CP000552_1739... 81 3e-30
CU694433_2(CU694433|pid:none) Ralstonia solanacearum strain IPO1... 82 3e-30
(P15766) RecName: Full=50S ribosomal protein L3, cyanelle; &R5K... 80 3e-30
EU912438_80(EU912438|pid:none) Vaucheria litorea chloroplast, co... 84 3e-30
CU928174_648(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 81 4e-30
(A4QBH9) RecName: Full=50S ribosomal protein L3; &(Q8NT09) RecN... 83 4e-30
(P60453) RecName: Full=50S ribosomal protein L3; &BX248355_91(B... 81 4e-30
(A8EZL6) RecName: Full=50S ribosomal protein L3; &CP000409_846(... 85 4e-30
(B2SQR0) RecName: Full=50S ribosomal protein L3; &(Q2NZY5) RecN... 79 4e-30
(Q0SQE4) RecName: Full=50S ribosomal protein L3; &CP000312_2312... 83 4e-30
(Q8RIF5) RecName: Full=50S ribosomal protein L3; &AE009951_140(... 82 4e-30
(A5D5J0) RecName: Full=50S ribosomal protein L3; &AP009389_320(... 82 4e-30
(Q8KAH2) RecName: Full=50S ribosomal protein L3; &AE006470_2160... 80 4e-30
BA000016_2405(BA000016|pid:none) Clostridium perfringens str. 13... 83 5e-30
(Q0TMP6) RecName: Full=50S ribosomal protein L3; &(Q8XHS3) RecN... 83 5e-30
CP001229_1710(CP001229|pid:none) Sulfurihydrogenibium azorense A... 86 7e-30
A87142(A87142) 50S ribosomal protein L3 [imported] - Mycobacteri... 80 7e-30
(P30762) RecName: Full=50S ribosomal protein L3; 80 7e-30
(A0PM63) RecName: Full=50S ribosomal protein L3; &CP000325_652(... 79 7e-30
(B1I1I8) RecName: Full=50S ribosomal protein L3; &CP000860_217(... 86 7e-30
CU458896_3792(CU458896|pid:none) Mycobacterium abscessus chromos... 80 7e-30
(Q7UZU7) RecName: Full=50S ribosomal protein L3; &BX548174_1800... 80 9e-30
CP000854_1018(CP000854|pid:none) Mycobacterium marinum M, comple... 79 9e-30
(A1ALU1) RecName: Full=50S ribosomal protein L3; &CP000482_670(... 81 9e-30
(A7HM52) RecName: Full=50S ribosomal protein L3; &CP000771_1112... 86 9e-30
EF444532_1(EF444532|pid:none) Oryza sativa Japonica Group putati... 85 9e-30
(A2BTD7) RecName: Full=50S ribosomal protein L3; &CP000551_1761... 82 1e-29
(Q318I4) RecName: Full=50S ribosomal protein L3; &CP000111_1802... 81 1e-29
T45364(T45364) ribosomal protein L3 [imported] - Mycobacterium l... 80 1e-29
CP001089_1328(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 80 1e-29
(Q3AUW3) RecName: Full=50S ribosomal protein L3; &CP000097_1938... 79 1e-29
(B0C1D3) RecName: Full=50S ribosomal protein L3; &CP000828_4581... 80 1e-29
(Q2RFP7) RecName: Full=50S ribosomal protein L3; &CP000232_2400... 89 2e-29
(A5GAW5) RecName: Full=50S ribosomal protein L3; &CP000698_1055... 79 2e-29
(B1HMY0) RecName: Full=50S ribosomal protein L3; &CP000817_4412... 86 2e-29
(Q97EH8) RecName: Full=50S ribosomal protein L3; &AE001437_3085... 85 2e-29
CP001336_419(CP001336|pid:none) Desulfitobacterium hafniense DCB... 79 2e-29
(Q8CRG0) RecName: Full=50S ribosomal protein L3; &AE015929_1824... 81 3e-29
CP001032_225(CP001032|pid:none) Opitutus terrae PB90-1, complete... 80 3e-29
CP001095_2160(CP001095|pid:none) Bifidobacterium longum subsp. i... 89 3e-29
BX640422_3(BX640422|pid:none) Bordetella pertussis strain Tohama... 77 3e-29
CP001108_2008(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 82 3e-29
AP008981_1044(AP008981|pid:none) Orientia tsutsugamushi str. Ike... 85 3e-29
(A6LPR1) RecName: Full=50S ribosomal protein L3; &CP000721_151(... 81 3e-29
(P49569) RecName: Full=50S ribosomal protein L3, chloroplastic; 80 3e-29
CP000967_1220(CP000967|pid:none) Xanthomonas oryzae pv. oryzae P... 79 3e-29
(Q7MTL3) RecName: Full=50S ribosomal protein L3; &AE015924_1661... 80 3e-29
(B2A4D9) RecName: Full=50S ribosomal protein L3; &CP001034_194(... 77 4e-29
CP001145_962(CP001145|pid:none) Coprothermobacter proteolyticus ... 79 6e-29
CP001102_179(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 80 6e-29
(Q11QB2) RecName: Full=50S ribosomal protein L3; &CP000383_3110... 84 6e-29
(A6KYJ5) RecName: Full=50S ribosomal protein L3; &CP000139_779(... 84 6e-29
(A0M598) RecName: Full=50S ribosomal protein L3; &CU207366_2802... 76 6e-29
BC055650_1(BC055650|pid:none) Danio rerio mitochondrial ribosoma... 80 7e-29
(B1X508) RecName: Full=50S ribosomal protein L3, chromatophore; ... 81 7e-29
CP001601_389(CP001601|pid:none) Corynebacterium aurimucosum ATCC... 81 7e-29
AP008955_221(AP008955|pid:none) Brevibacillus brevis NBRC 100599... 80 7e-29
(Q99N95) RecName: Full=39S ribosomal protein L3, mitochondrial; ... 81 9e-29
(B1I8J8) RecName: Full=50S ribosomal protein L3; &(Q04MN6) RecN... 89 1e-28
(Q2S3R4) RecName: Full=50S ribosomal protein L3; &CP000159_1009... 84 1e-28
(Q7VQE8) RecName: Full=50S ribosomal protein L3; &BX248583_178(... 82 1e-28
(Q6B8V3) RecName: Full=50S ribosomal protein L3, chloroplastic; ... 77 1e-28
AB170181_1(AB170181|pid:none) Macaca fascicularis brain cDNA clo... 80 2e-28
(Q890N9) RecName: Full=50S ribosomal protein L3; &AE015927_2341... 81 2e-28
CP000976_462(CP000976|pid:none) Borrelia duttonii Ly, complete g... 79 2e-28
(Q8ETY2) RecName: Full=50S ribosomal protein L3; &BA000028_119(... 76 2e-28
(Q4FLL8) RecName: Full=50S ribosomal protein L3; &CP000084_1096... 83 3e-28
AM494475_376(AM494475|pid:none) Orientia tsutsugamushi Boryong c... 82 3e-28
(A0LIJ0) RecName: Full=50S ribosomal protein L3; &CP000478_1538... 79 3e-28
(Q252V3) RecName: Full=50S ribosomal protein L3; &AP006861_913(... 78 4e-28
(A4J111) RecName: Full=50S ribosomal protein L3; &CP000612_212(... 76 4e-28
(A6QJ92) RecName: Full=50S ribosomal protein L3; &(A6U3X5) RecN... 79 5e-28
(A4IJI9) RecName: Full=50S ribosomal protein L3; &CP000557_106(... 82 5e-28
(B1IGF4) RecName: Full=50S ribosomal protein L3; &CP000939_3495... 77 5e-28
(Q01W92) RecName: Full=50S ribosomal protein L3; &CP000473_5057... 75 5e-28
(P31334) RecName: Full=54S ribosomal protein L9, mitochondrial; ... 81 6e-28
(A1AVK0) RecName: Full=50S ribosomal protein L3; &CP000488_153(... 87 6e-28
CP001357_2079(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 78 6e-28
(P28600) RecName: Full=50S ribosomal protein L3; &S24363(S24363... 82 6e-28
(A0ALW8) RecName: Full=50S ribosomal protein L3; &(Q927K7) RecN... 80 6e-28
(A3CK63) RecName: Full=50S ribosomal protein L3; &CP000387_98(C... 88 6e-28
(Q4A5C1) RecName: Full=50S ribosomal protein L3; &AE017245_637(... 89 8e-28
(A5I7K6) RecName: Full=50S ribosomal protein L3; &(A7FZ69) RecN... 77 8e-28
FM992695_51(FM992695|pid:none) Candida dubliniensis CD36 chromos... 85 1e-27
CP001615_1624(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 83 1e-27
AJ719688_1(AJ719688|pid:none) Gallus gallus mRNA for hypothetica... 78 1e-27
(Q4AAE0) RecName: Full=50S ribosomal protein L3; &AE017243_192(... 92 1e-27
(Q1D706) RecName: Full=50S ribosomal protein L3; &CP000113_3281... 82 1e-27
(Q47LJ3) RecName: Full=50S ribosomal protein L3; &CP000088_2639... 77 1e-27
AM946015_66(AM946015|pid:none) Streptococcus uberis 0140J comple... 88 1e-27
(A7Z0N8) RecName: Full=50S ribosomal protein L3; &CP000560_116(... 80 2e-27
CP001581_3711(CP001581|pid:none) Clostridium botulinum A2 str. K... 76 2e-27
(Q3K3W9) RecName: Full=50S ribosomal protein L3; &(Q8E2D1) RecN... 87 2e-27
(Q7U4K0) RecName: Full=50S ribosomal protein L3; &BX569694_251(... 79 2e-27
S78276(S78276) ribosomal protein L3, chloroplast - Odontella sin... 74 2e-27
(P60454) RecName: Full=50S ribosomal protein L3; &AE017180_2840... 77 3e-27
(A5USI9) RecName: Full=50S ribosomal protein L3; &CP000686_1149... 76 3e-27
CP001129_52(CP001129|pid:none) Streptococcus equi subsp. zooepid... 87 3e-27
(O46894) RecName: Full=50S ribosomal protein L3, chloroplastic; ... 75 4e-27
(Q4A8H1) RecName: Full=50S ribosomal protein L3; &AE017244_197(... 90 5e-27
(A7NR63) RecName: Full=50S ribosomal protein L3; &CP000804_3920... 78 5e-27
(Q03EB6) RecName: Full=50S ribosomal protein L3; &CP000422_1345... 77 5e-27
(Q9A1X4) RecName: Full=50S ribosomal protein L3; &AE004092_37(A... 84 5e-27
AE009440_669(AE009440|pid:none) Chlamydophila pneumoniae TW-183,... 77 6e-27
(Q9Z7Q7) RecName: Full=50S ribosomal protein L3; &A81611(A81611... 77 6e-27
CP001056_208(CP001056|pid:none) Clostridium botulinum B str. Ekl... 79 6e-27
FM204883_53(FM204883|pid:none) Streptococcus equi subsp. equi 40... 86 6e-27
(B7J243) RecName: Full=50S ribosomal protein L3; &AE000783_477(... 81 6e-27
(P60457) RecName: Full=50S ribosomal protein L3; &AY198133_21(A... 77 8e-27
(A5CXK4) RecName: Full=50S ribosomal protein L3; &AP009247_160(... 87 8e-27
(A7GK20) RecName: Full=50S ribosomal protein L3; &CP000764_102(... 79 8e-27
CP001230_1171(CP001230|pid:none) Persephonella marina EX-H1, com... 80 1e-26
(Q839G4) RecName: Full=50S ribosomal protein L3; &AE016830_190(... 80 1e-26
(Q81J42) RecName: Full=50S ribosomal protein L3; &AE016877_102(... 76 1e-26
(A0R8I0) RecName: Full=50S ribosomal protein L3; &(B7HJ48) RecN... 76 1e-26
(A5FMY1) RecName: Full=50S ribosomal protein L3; &CP000685_395(... 76 1e-26
(A5IV34) RecName: Full=50S ribosomal protein L3; &CP000703_2243... 74 1e-26
(B8FET5) RecName: Full=50S ribosomal protein L3; &CP001322_1902... 75 1e-26
(B2GDW9) RecName: Full=50S ribosomal protein L3; &AP008937_1515... 79 2e-26
CP001275_943(CP001275|pid:none) Thermomicrobium roseum DSM 5159,... 74 2e-26
(Q2NIV4) RecName: Full=50S ribosomal protein L3; &CP000061_522(... 84 3e-26
(Q5HDV8) RecName: Full=50S ribosomal protein L3; &CP000046_2182... 79 3e-26
(P94267) RecName: Full=50S ribosomal protein L3; 79 3e-26
(Q601L5) RecName: Full=50S ribosomal protein L3; &AE017332_185(... 87 4e-26
(Q046C5) RecName: Full=50S ribosomal protein L3; &CP000413_280(... 80 4e-26
AM999887_1165(AM999887|pid:none) Wolbachia endosymbiont of Culex... 82 5e-26
(Q6MSM6) RecName: Full=50S ribosomal protein L3; &BX293980_710(... 79 5e-26
AY372454_27(AY372454|pid:none) Uncultured marine gamma proteobac... 80 5e-26
AF115283_5(AF115283|pid:none) Leptospira interrogans S10-spc-alp... 75 5e-26
(Q72NG1) RecName: Full=50S ribosomal protein L3; &(Q9XD36) RecN... 75 5e-26
(Q73PN1) RecName: Full=50S ribosomal protein L3; &AE017226_760(... 75 7e-26
(P18665) RecName: Full=39S ribosomal protein L3, mitochondrial; ... 72 1e-25
CP001472_1384(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 75 1e-25
CP000975_678(CP000975|pid:none) Methylacidiphilum infernorum V4,... 82 1e-25
(P10134) RecName: Full=50S ribosomal protein L3; &CP000123_660(... 77 1e-25
U78193_3(U78193|pid:none) Borrelia burgdorferi tuf-s10 operon: e... 77 1e-25
R5YM3C(S02831) ribosomal protein L3 - Mycoplasma capricolum &X0... 77 2e-25
(Q1WS90) RecName: Full=50S ribosomal protein L3; &CP000233_1416... 82 2e-25
(Q04PT8) RecName: Full=50S ribosomal protein L3; &(Q055E4) RecN... 73 2e-25
BC016586_1(BC016586|pid:none) Mus musculus mitochondrial ribosom... 81 3e-25
(A8ZV57) RecName: Full=50S ribosomal protein L3; &CP000859_708(... 75 6e-25
(B5ZB40) RecName: Full=50S ribosomal protein L3; &CP001184_217(... 77 7e-25
CR925678_638(CR925678|pid:none) Ehrlichia ruminantium str. Welge... 82 1e-24
(B1AIM0) RecName: Full=50S ribosomal protein L3; &(Q9PQR0) RecN... 77 1e-24
(A2RNQ5) RecName: Full=50S ribosomal protein L3; &AM406671_2337... 84 1e-24
CR925677_629(CR925677|pid:none) Ehrlichia ruminantium str. Garde... 82 1e-24
(B6YQ85) RecName: Full=50S ribosomal protein L3; &AP010656_94(A... 72 2e-24
BT052399_1(BT052399|pid:none) Medicago truncatula clone MTYFD_FE... 74 2e-24
(Q04C15) RecName: Full=50S ribosomal protein L3; &(Q1GBL8) RecN... 78 2e-24
CP001124_921(CP001124|pid:none) Geobacter bemidjiensis Bem, comp... 78 2e-24
(A6GZ99) RecName: Full=50S ribosomal protein L3; &AM398681_1303... 73 3e-24
(Q3A6P7) RecName: Full=50S ribosomal protein L3; &CP000142_775(... 70 5e-24
(Q98PY0) RecName: Full=50S ribosomal protein L3; &AL445565_62(A... 79 6e-24
(O84533) RecName: Full=50S ribosomal protein L3; &(Q3KLG9) RecN... 75 6e-24
(Q5FM90) RecName: Full=50S ribosomal protein L3; &CP000033_276(... 77 1e-23
(Q6ME63) RecName: Full=50S ribosomal protein L3; &BX908798_412(... 76 1e-23
AM884176_784(AM884176|pid:none) Chlamydia trachomatis strain L2/... 72 1e-23
(A5IYY6) RecName: Full=50S ribosomal protein L3; &CU179680_548(... 74 2e-23
(Q1AU29) RecName: Full=50S ribosomal protein L3; &CP000386_2118... 70 2e-23
CP001146_814(CP001146|pid:none) Dictyoglomus thermophilum H-6-12... 77 3e-23
CR954202_579(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 68 4e-23
AE014298_2310(AE014298|pid:none) Drosophila melanogaster chromos... 82 1e-22
(Q1ISC2) RecName: Full=50S ribosomal protein L3; &CP000360_1223... 71 2e-22
CP000236_392(CP000236|pid:none) Ehrlichia chaffeensis str. Arkan... 80 2e-22
CP001055_1399(CP001055|pid:none) Elusimicrobium minutum Pei191, ... 69 3e-22
(O83219) RecName: Full=50S ribosomal protein L3; &AE000520_187(... 69 3e-22
CP001131_1875(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 67 2e-21
CP001047_332(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 74 3e-21
(Q2IJD0) RecName: Full=50S ribosomal protein L3; &CP000251_1981... 67 3e-21
CP000235_253(CP000235|pid:none) Anaplasma phagocytophilum HZ, co... 79 8e-21
(P94799) RecName: Full=50S ribosomal protein L3; Flags: Fragment... 87 8e-21
(P75580) RecName: Full=50S ribosomal protein L3; &S73992(S73992... 74 1e-20
BT052683_1(BT052683|pid:none) Medicago truncatula clone MTYFD_FE... 76 6e-20
(B1MW14) RecName: Full=50S ribosomal protein L3; &DQ489736_1588... 65 1e-19
BA000026_1013(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, ... 70 2e-19
(Q8EUB3) RecName: Full=50S ribosomal protein L3; 70 2e-19
EU970129_1(EU970129|pid:none) Zea mays clone 340272 unknown mRNA. 86 2e-19
AF370170_1(AF370170|pid:none) Arabidopsis thaliana putative ribo... 97 2e-18
(P49404) RecName: Full=Putative 39S ribosomal protein L3, mitoch... 60 1e-17
AM910996_620(AM910996|pid:none) Plasmodium knowlesi strain H chr... 62 3e-17
AE014188_431(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 62 4e-17
AP009153_873(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DNA... 63 6e-17
CR940353_667(CR940353|pid:none) Theileria annulata strain Ankara... 62 7e-17
(P60455) RecName: Full=50S ribosomal protein L3; &AP006628_200(... 59 2e-16
(Q9TLT2) RecName: Full=50S ribosomal protein L3, chloroplastic; ... 67 5e-16
CP001147_1391(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 81 9e-14
AP009178_223(AP009178|pid:none) Nitratiruptor sp. SB155-2 genomi... 66 5e-12
EU365931_1(EU365931|pid:none) Leptospira interrogans serovar Lai... 75 5e-12
EU365939_1(EU365939|pid:none) Leptospira noguchii serovar Proech... 75 5e-12
EU365937_1(EU365937|pid:none) Leptospira santarosai serovar Trop... 73 2e-11
EU365935_1(EU365935|pid:none) Leptospira borgpetersenii serovar ... 73 2e-11
BT036272_1(BT036272|pid:none) Zea mays full-length cDNA clone ZM... 73 3e-11
U02153_1(U02153|pid:none) Mycoplasma genitalium random genomic c... 62 3e-11
CP000886_4154(CP000886|pid:none) Salmonella enterica subsp. ente... 72 4e-11
AM910989_155(AM910989|pid:none) Plasmodium knowlesi strain H chr... 71 7e-11
EU365945_1(EU365945|pid:none) Leptospira alexanderi serovar Meng... 71 1e-10
AL929357_23(AL929357|pid:none) Plasmodium falciparum strain 3D7,... 70 1e-10
AL844508_181(AL844508|pid:none) Plasmodium falciparum 3D7 chromo... 70 1e-10
AF250390_3(AF250390|pid:none) Carsonella ruddii elongation facto... 61 3e-10
AF274444_12(AF274444|pid:none) Carsonella ruddii ribosomal prote... 61 5e-10
CP000153_286(CP000153|pid:none) Sulfurimonas denitrificans DSM 1... 52 6e-10
(Q7M8D4) RecName: Full=50S ribosomal protein L3; &BX571661_234(... 57 1e-09
CP001279_1579(CP001279|pid:none) Nautilia profundicola AmH, comp... 67 2e-09
(Q9PLX1) RecName: Full=50S ribosomal protein L3; &AL111168_1620... 62 7e-09
(Q7VGE4) RecName: Full=50S ribosomal protein L3; 53 7e-09
CP000776_75(CP000776|pid:none) Campylobacter hominis ATCC BAA-38... 55 1e-08
CP000361_732(CP000361|pid:none) Arcobacter butzleri RM4018, comp... 52 1e-08
V00344_2(V00344|pid:none) E. coli genes rpsJ and rplC for riboso... 64 2e-08
CP000932_57(CP000932|pid:none) Campylobacter lari RM2100, comple... 63 2e-08
AL445565_61(AL445565|pid:none) Mycoplasma pulmonis (strain UAB C... 43 4e-08
CP000262_45(CP000262|pid:none) Streptococcus pyogenes MGAS10750,... 62 4e-08
(Q9AIN8) RecName: Full=50S ribosomal protein L3; &AF250389_3(AF... 54 1e-07
CP000262_46(CP000262|pid:none) Streptococcus pyogenes MGAS10750,... 59 3e-07
CP000792_1885(CP000792|pid:none) Campylobacter concisus 13826, c... 58 6e-07
AM494966_4(AM494966|pid:none) Leishmania braziliensis chromosome... 55 4e-06
EF214959_1(EF214959|pid:none) Callithrix jacchus clone M08-53.3_... 45 0.006
D64127_9(D64127|pid:none) Bacillus subtilis genes for RNA polyme... 41 0.082
CP001047_331(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 35 0.17
(Q8TY90) RecName: Full=50S ribosomal protein L3P; &AE009439_415... 34 0.28
(Q975I1) RecName: Full=50S ribosomal protein L3P; &BA000023_478... 35 0.36
(P54014) RecName: Full=50S ribosomal protein L3P; &A64322(A6432... 30 0.46
(A9A9B8) RecName: Full=50S ribosomal protein L3P; &CP000867_111... 28 3.5
(A4FVY2) RecName: Full=50S ribosomal protein L3P; &CP000609_33(... 28 4.5
CP001400_1281(CP001400|pid:none) Sulfolobus islandicus M.14.25, ... 35 5.9
CP001399_1368(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 35 5.9

>(A9W4Q1) RecName: Full=50S ribosomal protein L3;
&CP000908_2128(CP000908|pid:none)
Length = 246

Score = 112 bits (280), Expect(2) = 3e-46
Identities = 60/128 (46%), Positives = 81/128 (63%), Gaps = 1/128 (0%)
Frame = +1

Query: 292 RVGAIGKKVGMLTTYIGDIAY-PVTVIQLPNNQVTQIKRKVNDGVDMIQVGADEIKLKNV 468
R G I +KVGM + + PVTV+Q+ QV + DG +QVG + K+KNV
Sbjct: 2 RSGVIARKVGMTRVFTDAGEHVPVTVLQIDQCQVVAHRTTEKDGYVALQVGVGKAKVKNV 61

Query: 469 SKTLQGHFAKANVPPKRVLMEFRVTRNAMNLELGTPILPKHFLPGQLITVKGTNTGKGFA 648
S+ +G FA A V PK+ L EFRV+ +A+ + +G I HF+PGQ + V GT+TGKGFA
Sbjct: 62 SQAERGRFAVAKVEPKKKLAEFRVSEDAL-IPVGAEITADHFIPGQFVDVTGTSTGKGFA 120

Query: 649 GGMKRWHF 672
GGMKRW+F
Sbjct: 121 GGMKRWNF 128

Score = 98.2 bits (243), Expect(2) = 3e-46
Identities = 47/94 (50%), Positives = 64/94 (68%)
Frame = +2

Query: 674 GGQPATHGVSLTHRAIGSTGCRQTPGRVFKGRKMPGRLGGKSCTVKNLQVLKINTEMNCL 853
GG ATHGVS++HR+IGSTG RQ PG+ FK +KMPG LG + T +NL+V++ + E +
Sbjct: 129 GGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLKVVRTDPERGLI 188

Query: 854 LVKGAVPGKKGGYLKITDSRSMKWKEAPPFPTYF 955
LV+GAVPG GG++++ DS K P P F
Sbjct: 189 LVEGAVPGVAGGWIQVRDSVKRKLPADVPLPGKF 222

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,751,304,530
Number of extensions: 34456035
Number of successful extensions: 82611
Number of sequences better than 10.0: 473
Number of HSP's gapped: 82088
Number of HSP's successfully gapped: 927
Length of query: 431
Length of database: 1,040,966,779
Length adjustment: 131
Effective length of query: 300
Effective length of database: 621,205,444
Effective search space: 186361633200
Effective search space used: 186361633200
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.63 gvh: 0.31 alm: 0.43 top: 0.53 tms: 0.00 mit: 0.32 mip: 0.06
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.33 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

36.0 %: cytoplasmic
32.0 %: mitochondrial
28.0 %: nuclear
4.0 %: vacuolar

>> prediction for Contig-U10163-1 is cyt

VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 11
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 1
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0