Contig-U10135-1 |
Contig ID |
Contig-U10135-1 |
Contig update |
2002. 9.13 |
Contig sequence |
|
Gap |
no gap |
Contig length |
1395 |
Chromosome number (1..6, M) |
4 |
Chromosome length |
5430582 |
Start point |
1012866 |
End point |
1014228 |
Strand (PLUS/MINUS) |
PLUS |
Number of clones |
6 |
Number of EST |
8 |
Link to clone list |
U10135 |
List of clone(s) |
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.10 |
Homology vs CSM-cDNA |
|
dna update |
2008.11.18 |
Homology vs DNA |
Query= Contig-U10135-1 (Contig-U10135-1Q) /CSM_Contig/Contig-U10135-1Q.Seq.d (1395 letters)
Database: ddbj_A 92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(BJ417167) Dictyostelium discoideum cDNA clone:ddv29o15, 5' ... 961 0.0 2 (BJ387259) Dictyostelium discoideum cDNA clone:dds1l02, 5' e... 862 0.0 2 (BJ398596) Dictyostelium discoideum cDNA clone:dds1l02, 3' e... 755 0.0 3 (BJ436053) Dictyostelium discoideum cDNA clone:ddv29o15, 3' ... 563 0.0 5 (C93999) Dictyostelium discoideum slug cDNA, clone SSK681. 438 e-175 2 (AU074433) Dictyostelium discoideum slug cDNA, clone SSK681. 476 e-129 1 (C93251) Dictyostelium discoideum slug cDNA, clone SSM876. 208 9e-55 2 (AU269442) Dictyostelium discoideum vegetative cDNA clone:VS... 208 1e-54 2 (AU269443) Dictyostelium discoideum vegetative cDNA clone:VS... 208 4e-49 1 (BJ444483) Dictyostelium discoideum cDNA clone:ddv56c16, 3' ... 182 2e-41 1 (AU052891) Dictyostelium discoideum slug cDNA, clone SLF279. 101 8e-18 2 (EL569119) Physarum12177 Physarum polycephalum starvation st... 54 1e-09 2 (EL569054) Physarum12176 Physarum polycephalum starvation st... 54 1e-09 2 (CB814958) USDA-FP_100431 Adult Alate Brown Citrus Aphid Tox... 46 3e-07 2 (DN798741) Volcani_2_03_G03 Volcani02 Citrus reticulata x Ci... 44 2e-06 3 (DY283678) IC0AAA5AH03RM1 CitNFL Citrus clementina cDNA 5', ... 44 3e-06 3 (DY284210) IC0AAA60DA05RM1 CitNFL Citrus clementina cDNA 5',... 44 3e-06 3 (DY269595) IC0AAA27BE08RM1 CitNFL Citrus clementina cDNA 5',... 44 3e-06 3 (DY303184) KN0AAQ5YA22RM1 CitNFL Citrus clementina cDNA 5', ... 44 3e-06 3 (DY295298) IC0AAA87DF02RM1 CitNFL Citrus clementina cDNA 5',... 44 5e-06 3 (DY278445) IC0AAA46CF08RM1 CitNFL Citrus clementina cDNA 5',... 44 1e-05 3 (DY288667) IC0AAA70BB01RM1 CitNFL Citrus clementina cDNA 5',... 44 2e-05 2 (DY286342) IC0AAA64DE05RM1 CitNFL Citrus clementina cDNA 5',... 44 2e-05 2 (DY299506) IC0AAA98CD01RM1 CitNFL Citrus clementina cDNA 5',... 44 2e-05 2 (DY290235) IC0AAA74DD05RM1 CitNFL Citrus clementina cDNA 5',... 44 2e-05 2 (DY267493) IC0AAA21CD11RM1 CitNFL Citrus clementina cDNA 5',... 44 2e-05 2 (DY291030) IC0AAA77AC01RM1 CitNFL Citrus clementina cDNA 5',... 44 2e-05 2 (DY289014) IC0AAA71AH08RM1 CitNFL Citrus clementina cDNA 5',... 44 2e-05 2 (DY301250) KN0AAQ12YJ15RM1 CitNFL Citrus clementina cDNA 5',... 44 2e-05 2 (DY292079) IC0AAA79DH03RM1 CitNFL Citrus clementina cDNA 5',... 44 2e-05 2 (DY289734) IC0AAA73BF11RM1 CitNFL Citrus clementina cDNA 5',... 44 2e-05 2 (DY297075) IC0AAA91DA08RM1 CitNFL Citrus clementina cDNA 5',... 44 2e-05 2 (EL451319) CHTM4209.b2_B22.ab1 CHT(LMS) Jerusalem artichoke ... 42 2e-05 2 (CX668306) UCRCP01_036_H03_T3 Swingle citrumelo nematode-cha... 44 2e-05 2 (EY825426) PT11-C1-901-081-C07-CT.F Poncirus trifoliata leaf... 44 2e-05 2 (EY718327) CS00-C3-702-097-A06-CT.F Sweet orange fruit, deve... 44 2e-05 2 (EY777222) CR05-C1-103-025-E06-CT.F Mandarin leaf, infected ... 44 2e-05 2 (EL445250) CHTM2206.b1_K24.ab1 CHT(LMS) Jerusalem artichoke ... 42 2e-05 2 (EL430435) CHCM9538.b1_D10.ab1 CHC(LMS) Texas blueweed Helia... 42 2e-05 2 (DN959885) USDA-FP/ARO_15715 Star Ruby grapefruit hot water-... 44 2e-05 2 (EL416570) CHCL5159.b1_N17.ab1 CHC(LMS) Texas blueweed Helia... 42 2e-05 2 (EL436452) CHTM11490.b1_D18.ab1 CHT(LMS) Jerusalem artichoke... 42 2e-05 2 (CN183274) UCRCS04_0003M07_r Ruby Orange Developing Flower c... 44 2e-05 2 (EE634840) CHEL5703.b1_N10.ab1 CHE(LMS) serpentine sunflower... 42 2e-05 2 (EY775124) CR05-C1-103-001-E03-CT.F Mandarin leaf, infected ... 44 2e-05 2 (CF836630) UCRCS03_03E22_r Washington Navel Orange Shoot Mer... 44 2e-05 2 (EE619287) CHWM6553.b1_A07.ab1 CHW(LMS) silverleaf sunflower... 42 2e-05 2 (CX546176) UCRPT01_5_027_D05_T3 Poncirus trifoliata CTV-chal... 44 2e-05 2 (DN620341) UCRCS11_05C22_r Parent Washington Navel Orange Sc... 44 2e-05 2 (BQ916712) QHB18M19.yg.ab1 QH_ABCDI sunflower RHA801 Heliant... 42 2e-05 2 (EC825957) SME00010194 esmbsro2 Sawyeria marylandensis cDNA,... 46 9e-05 2 (EY723243) CS00-C3-703-055-B06-CT.F Sweet orange fruit, deve... 40 2e-04 2 (EL454061) CHTM6763.b1_E12.ab1 CHT(LMS) Jerusalem artichoke ... 40 2e-04 2 (EL442183) CHTM18877.b1_I15.ab1 CHT(LMS) Jerusalem artichoke... 40 2e-04 2 (EY738903) CS00-C3-705-049-E05-CT.F Sweet orange fruit, deve... 40 2e-04 2 (EE642471) CHEM2432.b1_P07.ab1 CHE(LMS) serpentine sunflower... 40 2e-04 2 (EL827400) CBWN9577.b1 NICHD_XGC_tropTe1 Xenopus (Silurana) ... 50 4e-04 2 (EY664338) CS00-C1-101-065-E06-CT.F Sweet orange leaf, infec... 38 0.012 2 (EL571407) Physarum03691 Physarum polycephalum starvation st... 54 0.015 1 (EL445194) CHTM22008.b1_P05.ab1 CHT(LMS) Jerusalem artichoke... 40 0.017 3 (EL443831) CHTM20753.b1_A05.ab1 CHT(LMS) Jerusalem artichoke... 38 0.046 2 (CJ477930) Macaca fascicularis mRNA, clone: QtrA-12887, 5' e... 42 0.078 2 (CJ459056) Macaca fascicularis mRNA, clone: QmoA-11173, 5' e... 42 0.30 2 (CC943372) BOIEW26TR BO_1.4_1.6_KB_nuc Brassica oleracea gen... 48 0.90 1 (CJ434800) Macaca fascicularis mRNA, clone: QccE-11813, 5' e... 48 0.90 1 (FE259167) CAPH7543.fwd CAPH Naegleria gruberi amoeba stage ... 48 0.90 1 (FE248173) CAPH1529.fwd CAPH Naegleria gruberi amoeba stage ... 48 0.90 1 (FE248061) CAPH1461.fwd CAPH Naegleria gruberi amoeba stage ... 48 0.90 1 (FE238119) CAPG4699.fwd CAPG Naegleria gruberi amoeba stage ... 48 0.90 1 (EY178882) CBTI6656.b1_P07.ab1:P Triphysaria pusilla root ti... 48 0.90 1 (EY147377) CBTN10773.b1_I05.ab1:P Triphysaria pusilla root t... 48 0.90 1 (AU262729) Dictyostelium discoideum vegetative cDNA clone:VS... 44 0.98 2 (EL447684) CHTM26422.b1_L06.ab1 CHT(LMS) Jerusalem artichoke... 40 1.0 2 (CI079717) Oryza sativa Japonica Group cDNA, clone: 017-M017... 34 1.2 3 (EJ197561) 1092344258361 Global-Ocean-Sampling_GS-27-01-01-1... 44 1.3 2 (FD556313) RR4EJ78TF RR4(PB) Raphanus raphanistrum subsp. la... 36 1.4 3 (BJ416228) Dictyostelium discoideum cDNA clone:ddv25k08, 5' ... 38 3.2 2 (CU074292) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.6 1 (AC218316) Bos taurus clone CH240-287J12, WORKING DRAFT SEQU... 46 3.6 1 (AC203114) Aotus nancymaae clone CH258-405B12, WORKING DRAFT... 46 3.6 1 (AC180193) Strongylocentrotus purpuratus clone R3-3H3, WORKI... 46 3.6 1 (AM686008) Entamoeba terrapinae GSS, clone terra145d11.q1k. 46 3.6 1 (CT365689) Sus scrofa genomic clone CH242-468D14, genomic su... 46 3.6 1 (AG689128) Macaca fuscata fuscata DNA, clone: MSB2-121L04_R,... 46 3.6 1 (AG350262) Mus musculus molossinus DNA, clone:MSMg01-146N06.... 46 3.6 1 (EB172581) EST007480 injuried spinal cord cDNA library in Ge... 46 3.6 1 (DR069734) RTDK1_9_D01.b1_A029 Roots, dark Pinus taeda cDNA ... 46 3.6 1 (CX715225) RTPQ1_32_D09.g1_A032 Roots treated with paraquat ... 46 3.6 1 (CX715175) RTPQ1_32_D09.b1_A032 Roots treated with paraquat ... 46 3.6 1 (CX713012) RTPQ1_6_A01.g1_A032 Roots treated with paraquat P... 46 3.6 1 (CO370210) RTK1_66_F04.b1_A029 Roots minus potassium Pinus t... 46 3.6 1 (CN631788) taf44b09.y1 Hydra EST Darmstadt I Hydra magnipapi... 46 3.6 1 (CF479435) RTWW3_22_D09.b1_A022 Well-watered loblolly pine r... 46 3.6 1 (CF473982) RTWW2_18_C02.b1_A021 Well-watered loblolly pine r... 46 3.6 1 (CD327785) AGENCOURT_14140065 NICHD_XGC_Brn1 Xenopus laevis ... 46 3.6 1 (BG706974) 602672171F1 NIH_MGC_96 Homo sapiens cDNA clone IM... 46 3.6 1 (CJ447802) Macaca fascicularis mRNA, clone: QflA-13149, 5' e... 36 4.1 2 (BJ363139) Dictyostelium discoideum cDNA clone:ddc25e08, 5' ... 32 5.0 3 (FK806793) HTAM-aaa34g12.g1 Heterorhabditis_bacteriophora_ES... 38 5.6 2 (BJ416544) Dictyostelium discoideum cDNA clone:ddv26c19, 5' ... 32 6.1 3
>(BJ417167) Dictyostelium discoideum cDNA clone:ddv29o15, 5' end, single read. Length = 573
Score = 961 bits (485), Expect(2) = 0.0 Identities = 485/485 (100%) Strand = Plus / Plus
Query: 126 aagggtttactcaaacaattatcatcatatgttggtaaagatattacatctttaatctca 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagggtttactcaaacaattatcatcatatgttggtaaagatattacatctttaatctca 60
Query: 186 ttaccagtttggattttcgaaccagtatcattcttacaagttatgtccgaaccattacaa 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ttaccagtttggattttcgaaccagtatcattcttacaagttatgtccgaaccattacaa 120
Query: 246 tagaacgctttattatctaaagcctcaaaacaagatagcgaatttttatgtttagcttat 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tagaacgctttattatctaaagcctcaaaacaagatagcgaatttttatgtttagcttat 180
Query: 306 ttagctgccttcaattgtgcattatatagtactgctgttagaacaagaaaaccatttaat 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttagctgccttcaattgtgcattatatagtactgctgttagaacaagaaaaccatttaat 240
Query: 366 ccaattttaggtgaaacctttgaaattgttgataaaaaaggtgaatttagattccttgca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ccaattttaggtgaaacctttgaaattgttgataaaaaaggtgaatttagattccttgca 300
Query: 426 gaacaagttagtcatcacccaccaattggtgtatcagagacaatttcagaagattatact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gaacaagttagtcatcacccaccaattggtgtatcagagacaatttcagaagattatact 360
Query: 486 cttcaattagaaacattattgaaatccaaattctatggtaactcatcagaggttgaaatt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cttcaattagaaacattattgaaatccaaattctatggtaactcatcagaggttgaaatt 420
Query: 546 gatggtaccaatcatttcttcaataagaagaccaaccaccattacacatggaatcatttg 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gatggtaccaatcatttcttcaataagaagaccaaccaccattacacatggaatcatttg 480
Query: 606 gtaac 610 ||||| Sbjct: 481 gtaac 485
Score = 163 bits (82), Expect(2) = 0.0 Identities = 85/86 (98%) Strand = Plus / Plus
Query: 614 gttgtcataacattatcattggttcattatggtgggatcattatggtgatttagtcatcg 673 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 488 gttgtcataacattatcattggttcattatggttggatcattatggtgatttagtcatcg 547
Query: 674 aaaatcacactaccggtagcaaggca 699 |||||||||||||||||||||||||| Sbjct: 548 aaaatcacactaccggtagcaaggca 573
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 92845959 Number of Hits to DB: 1,290,035,074 Number of extensions: 72561482 Number of successful extensions: 5742670 Number of sequences better than 10.0: 105 Length of query: 1395 Length of database: 95,242,211,685 Length adjustment: 24 Effective length of query: 1371 Effective length of database: 97,308,875,965 Effective search space: 133410468948015 Effective search space used: 133410468948015 X1: 11 (21.8 bits) S2: 22 (44.1 bits)
|
protein update |
2009. 6.27 |
Homology vs Protein |
Query= Contig-U10135-1 (Contig-U10135-1Q) /CSM_Contig/Contig-U10135-1Q.Seq.d (1395 letters)
Database: nrp_A 3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
(Q54QP6) RecName: Full=Oxysterol-binding protein 8; AltName: Ful... 421 e-131 (Q54ID7) RecName: Full=Oxysterol-binding protein 11; AltName: Fu... 160 6e-65 EU973920_1(EU973920|pid:none) Zea mays clone 424251 oxysterol-bi... 133 2e-46 AP008209_1059(AP008209|pid:none) Oryza sativa (japonica cultivar... 127 3e-46 EF147666_1(EF147666|pid:none) Populus trichocarpa clone WS0124_D... 125 6e-45 FJ617521_1(FJ617521|pid:none) Capsicum annuum oxysterol-binding ... 118 1e-44 AC011436_15(AC011436|pid:none) Arabidopsis thaliana chromosome I... 122 2e-44 AL162508_15(AL162508|pid:none) Arabidopsis thaliana DNA chromoso... 120 7e-44 CP001324_588(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 121 7e-42 AB025604_8(AB025604|pid:none) Arabidopsis thaliana genomic DNA, ... 109 4e-40 CP000583_3(CP000583|pid:none) Ostreococcus lucimarinus CCE9901 c... 119 9e-39 AM270258_12(AM270258|pid:none) Aspergillus niger contig An12c001... 107 2e-37 AF491782_1(AF491782|pid:none) Homo sapiens oxysterol binding pro... 105 3e-37 AF491783_1(AF491783|pid:none) Homo sapiens oxysterol binding pro... 105 3e-37 AF491784_1(AF491784|pid:none) Homo sapiens oxysterol binding pro... 105 3e-37 AB384766_1(AB384766|pid:none) Synthetic construct DNA, clone: pF... 108 8e-37 AK093902_1(AK093902|pid:none) Homo sapiens cDNA FLJ36583 fis, cl... 108 8e-37 (Q9BZF3) RecName: Full=Oxysterol-binding protein-related protein... 108 8e-37 AK300389_1(AK300389|pid:none) Homo sapiens cDNA FLJ60071 complet... 108 8e-37 AF462443_1(AF462443|pid:none) Homo sapiens OSBP-related protein ... 108 8e-37 AK037703_1(AK037703|pid:none) Mus musculus 16 days neonate thymu... 107 1e-36 AK027600_1(AK027600|pid:none) Homo sapiens cDNA FLJ14694 fis, cl... 107 1e-36 AB046640_1(AB046640|pid:none) Macaca fascicularis brain cDNA, cl... 107 2e-36 AM920436_1159(AM920436|pid:none) Penicillium chrysogenum Wiscons... 105 4e-36 AK220498_1(AK220498|pid:none) Mus musculus mRNA for mKIAA4128 pr... 107 4e-36 AL928867_2(AL928867|pid:none) Mouse DNA sequence from clone RP23... 107 4e-36 AL928905_3(AL928905|pid:none) Mouse DNA sequence from clone RP23... 107 4e-36 (O14340) RecName: Full=Oxysterol-binding protein homolog C2F12.0... 107 1e-35 AB046641_1(AB046641|pid:none) Macaca fascicularis brain cDNA, cl... 104 2e-35 BC166009_1(BC166009|pid:none) Synthetic construct Mus musculus c... 106 2e-35 (Q9DBS9) RecName: Full=Oxysterol-binding protein-related protein... 108 3e-35 AB208886_1(AB208886|pid:none) Homo sapiens mRNA for oxysterol-bi... 105 2e-34 AY450639_1(AY450639|pid:none) Solanum tuberosum clone plbr3 puta... 111 3e-33 BX004991_4(BX004991|pid:none) Zebrafish DNA sequence from clone ... 98 1e-32 AX074157_1(AX074157|pid:none) Sequence 1 from Patent WO0104314. 91 1e-32 BX842641_28(BX842641|pid:none) Neurospora crassa DNA linkage gro... 103 2e-32 (Q12451) RecName: Full=Oxysterol-binding protein homolog 2; &S5... 102 4e-32 CU928169_689(CU928169|pid:none) Kluyveromyces thermotolerans str... 101 3e-31 L28920_10(L28920|pid:none) Saccharomyces cerevisiae chromosome I... 104 8e-31 S47536(S47536;S53461;S53463;S43081) oxysterol-binding protein ho... 104 8e-31 (P35845) RecName: Full=Oxysterol-binding protein homolog 1; &AY... 104 8e-31 DQ481666_16(DQ481666|pid:none) Takifugu rubripes HoxBb gene clus... 100 1e-30 CR382123_177(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 98 3e-30 BC083531_1(BC083531|pid:none) Danio rerio oxysterol binding prot... 130 1e-28 BC090724_1(BC090724|pid:none) Danio rerio oxysterol binding prot... 130 1e-28 AM270254_2(AM270254|pid:none) Aspergillus niger contig An11c0370... 97 4e-28 AC004669_24(AC004669|pid:none) Arabidopsis thaliana chromosome 2... 80 3e-27 CU928173_217(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 89 8e-26 CP000498_323(CP000498|pid:none) Pichia stipitis CBS 6054 chromos... 94 8e-26 CR380949_204(CR380949|pid:none) Candida glabrata strain CBS138 c... 96 1e-25 AK171585_1(AK171585|pid:none) Mus musculus B6-derived CD11 +ve d... 106 1e-25 DQ481665_2(DQ481665|pid:none) Takifugu rubripes HoxBa gene clust... 119 2e-25 BX004781_1(BX004781|pid:none) Zebrafish DNA sequence from clone ... 119 3e-25 CR382139_743(CR382139|pid:none) Debaryomyces hansenii strain CBS... 91 5e-25 (P22059) RecName: Full=Oxysterol-binding protein 1; &A34581(A34... 117 1e-24 AK299071_1(AK299071|pid:none) Homo sapiens cDNA FLJ60330 complet... 117 1e-24 DQ167771_1(DQ167771|pid:none) Drosophila simulans putative Oxyst... 99 1e-24 AB244622_1(AB244622|pid:none) Glycine max GmOSBP mRNA for oxyste... 84 1e-24 AK220301_1(AK220301|pid:none) Mus musculus mRNA for mKIAA4220 pr... 117 1e-24 (Q3B7Z2) RecName: Full=Oxysterol-binding protein 1; 117 1e-24 DQ167772_1(DQ167772|pid:none) Drosophila teissieri putative Oxys... 99 1e-24 BC094342_1(BC094342|pid:none) Mus musculus oxysterol binding pro... 114 8e-24 CR382134_467(CR382134|pid:none) Debaryomyces hansenii strain CBS... 95 1e-23 Y13951_1(Y13951|pid:none) Drosophila melanogaster cDNA encoding ... 96 1e-23 AK229811_1(AK229811|pid:none) Arabidopsis thaliana mRNA for hypo... 82 2e-23 AL033545_17(AL033545|pid:none) Arabidopsis thaliana DNA chromoso... 82 4e-23 EU025708_17(EU025708|pid:none) Salmo salar EAP30 subunit of ELL ... 111 5e-23 AK173006_1(AK173006|pid:none) Mus musculus premature mRNA for mK... 80 7e-23 AY139750_1(AY139750|pid:none) Arabidopsis thaliana AT4g08180/T12... 78 7e-23 AC091775_13(AC091775|pid:none) Oryza sativa chromosome 3 BAC OSJ... 80 1e-22 AL080252_2(AL080252|pid:none) Arabidopsis thaliana DNA chromosom... 78 2e-22 DQ630461_1(DQ630461|pid:none) Oncorhynchus mykiss OORP mRNA, com... 108 3e-22 AE013599_3994(AE013599|pid:none) Drosophila melanogaster chromos... 108 6e-22 AM458711_3(AM458711|pid:none) Vitis vinifera contig VV78X211217.... 82 9e-22 AF042797_5(AF042797|pid:none) Takifugu rubripes FRG1 (FRG1), N-a... 107 1e-21 BC063121_1(BC063121|pid:none) Homo sapiens oxysterol binding pro... 104 9e-21 AF255320_1(AF255320|pid:none) Drosophila yakuba oxysterol bindin... 84 1e-20 AF252729_1(AF252729|pid:none) Drosophila simulans strain sim1 ox... 85 2e-20 AK145292_1(AK145292|pid:none) Mus musculus mammary gland RCB-052... 102 3e-20 AF252731_1(AF252731|pid:none) Drosophila simulans strain sim3 ox... 85 4e-20 BC091208_1(BC091208|pid:none) Rattus norvegicus oxysterol bindin... 101 7e-20 CR760113_1(CR760113|pid:none) Xenopus tropicalis finished cDNA, ... 100 1e-19 BC066128_1(BC066128|pid:none) Xenopus tropicalis oxysterol bindi... 100 1e-19 AK315576_1(AK315576|pid:none) Homo sapiens cDNA, FLJ96652, highl... 100 1e-19 BC057194_1(BC057194|pid:none) Mus musculus oxysterol binding pro... 100 1e-19 AB018315_1(AB018315|pid:none) Homo sapiens mRNA for KIAA0772 pro... 100 2e-19 (Q9H1P3) RecName: Full=Oxysterol-binding protein-related protein... 100 2e-19 BC041533_1(BC041533|pid:none) Xenopus laevis hypothetical protei... 100 2e-19 BC073379_1(BC073379|pid:none) Xenopus laevis hypothetical protei... 100 2e-19 AB463156_1(AB463156|pid:none) Synthetic construct DNA, clone: pF... 100 2e-19 BC102883_1(BC102883|pid:none) Bos taurus oxysterol-binding prote... 100 2e-19 BT021611_1(BT021611|pid:none) Bos taurus oxysterol binding prote... 100 2e-19 AC004016_1(AC004016|pid:none) Homo sapiens BAC clone CTA-424N5 f... 99 3e-19 DQ167769_1(DQ167769|pid:none) Drosophila erecta putative Oxyster... 99 5e-19 BC041743_1(BC041743|pid:none) Xenopus laevis oxysterol binding p... 99 5e-19 EU955934_1(EU955934|pid:none) Zea mays clone 1553241 oxysterol-b... 76 6e-19 AL117202_18(AL117202|pid:none) Caenorhabditis elegans YAC Y47D3A... 97 1e-18 AL117202_21(AL117202|pid:none) Caenorhabditis elegans YAC Y47D3A... 97 1e-18 BC144117_1(BC144117|pid:none) Homo sapiens oxysterol binding pro... 97 1e-18 AK301862_1(AK301862|pid:none) Homo sapiens cDNA FLJ55503 complet... 97 1e-18 AF274714_1(AF274714|pid:none) Homo sapiens oxysterol-binding pro... 97 1e-18 AF392450_1(AF392450|pid:none) Homo sapiens oxysterol-binding pro... 97 1e-18 AF392449_1(AF392449|pid:none) Homo sapiens oxysterol-binding pro... 97 1e-18 AK001079_1(AK001079|pid:none) Homo sapiens cDNA FLJ10217 fis, cl... 97 1e-18 AC141435_21(AC141435|pid:none) Medicago truncatula clone mth2-21... 81 2e-18 CR857904_1(CR857904|pid:none) Pongo abelii mRNA; cDNA DKFZp459N1... 97 2e-18 BC162978_1(BC162978|pid:none) Danio rerio oxysterol binding prot... 97 2e-18 BX465190_10(BX465190|pid:none) Zebrafish DNA sequence from clone... 97 2e-18 (Q8K4M9) RecName: Full=Oxysterol-binding protein-related protein... 97 2e-18 AY809883_1(AY809883|pid:none) Schistosoma japonicum SJCHGC04472 ... 96 2e-18 AK168366_1(AK168366|pid:none) Mus musculus 17 days embryo heart ... 96 2e-18 (Q91XL9) RecName: Full=Oxysterol-binding protein-related protein... 96 2e-18 BC086265_1(BC086265|pid:none) Xenopus laevis hypothetical LOC495... 96 2e-18 AK132676_1(AK132676|pid:none) Mus musculus adult male testis cDN... 96 2e-18 BC045502_1(BC045502|pid:none) Danio rerio oxysterol binding prot... 96 3e-18 FN357392_47(FN357392|pid:none) Schistosoma mansoni genome sequen... 96 3e-18 DQ167770_1(DQ167770|pid:none) Drosophila orena putative Oxystero... 96 4e-18 CU928180_618(CU928180|pid:none) Kluyveromyces thermotolerans str... 96 4e-18 AK292895_1(AK292895|pid:none) Homo sapiens cDNA FLJ77475 complet... 96 4e-18 AM910991_296(AM910991|pid:none) Plasmodium knowlesi strain H chr... 95 7e-18 AF394063_1(AF394063|pid:none) Mus musculus oxysterol-binding pro... 94 9e-18 (P38713) RecName: Full=Oxysterol-binding protein homolog 3; &S4... 94 1e-17 AK093196_1(AK093196|pid:none) Homo sapiens cDNA FLJ35877 fis, cl... 93 2e-17 AB051451_1(AB051451|pid:none) Homo sapiens mRNA for KIAA1664 pro... 93 2e-17 AB384622_1(AB384622|pid:none) Synthetic construct DNA, clone: pF... 93 2e-17 AF288741_1(AF288741|pid:none) Homo sapiens oxysterol binding pro... 93 2e-17 CR380956_462(CR380956|pid:none) Candida glabrata strain CBS138 c... 93 2e-17 CR860450_1(CR860450|pid:none) Pongo abelii mRNA; cDNA DKFZp459L0... 93 2e-17 AK296525_1(AK296525|pid:none) Homo sapiens cDNA FLJ55561 complet... 93 2e-17 AK133806_1(AK133806|pid:none) Mus musculus 8 days embryo whole b... 93 3e-17 AL691413_7(AL691413|pid:none) Mouse DNA sequence from clone RP23... 92 3e-17 BC058356_1(BC058356|pid:none) Mus musculus oxysterol binding pro... 92 3e-17 (Q5QNQ6) RecName: Full=Oxysterol-binding protein 2; &AL691413_9... 92 3e-17 AK296354_1(AK296354|pid:none) Homo sapiens cDNA FLJ59707 complet... 91 8e-17 CR940348_559(CR940348|pid:none) Theileria annulata strain Ankara... 72 1e-16 CP000496_702(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 90 2e-16 CR382123_728(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 90 2e-16 Z81061_3(Z81061|pid:none) Caenorhabditis elegans Cosmid F14H8, c... 90 2e-16 Z81061_2(Z81061|pid:none) Caenorhabditis elegans Cosmid F14H8, c... 90 2e-16 AE016820_725(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 89 3e-16 EU957136_1(EU957136|pid:none) Zea mays clone 1583892 unknown mRNA. 81 3e-16 (O13944) RecName: Full=Oxysterol-binding protein homolog C23H4.0... 74 1e-15 AL049730_5(AL049730|pid:none) Arabidopsis thaliana DNA chromosom... 86 4e-15 CU928176_461(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 84 9e-15 BT067318_1(BT067318|pid:none) Zea mays full-length cDNA clone ZM... 84 2e-14 AK069104_1(AK069104|pid:none) Oryza sativa Japonica Group cDNA c... 83 2e-14 EF676788_1(EF676788|pid:none) Picea sitchensis clone WS02752_H12... 82 4e-14 DQ241801_1(DQ241801|pid:none) Petunia integrifolia oxysterol-bin... 79 3e-13 AY051614_1(AY051614|pid:none) Drosophila melanogaster GH25973 fu... 78 7e-13 AE014297_2885(AE014297|pid:none) Drosophila melanogaster chromos... 78 7e-13 AE014297_2881(AE014297|pid:none) Drosophila melanogaster chromos... 78 7e-13 FN392321_436(FN392321|pid:none) Pichia pastoris GS115 chromosome... 77 1e-12 AJ278263_1(AJ278263|pid:none) Mus musculus domesticus mRNA for o... 76 3e-12 AJ276505_1(AJ276505|pid:none) Mus musculus genomic fragment, 281... 76 3e-12 AC003093_2(AC003093|pid:none) Human BAC clone CTA-385F2 from 7p1... 57 6e-12 CR749542_1(CR749542|pid:none) Homo sapiens mRNA; cDNA DKFZp686A1... 75 7e-12 AF323730_1(AF323730|pid:none) Homo sapiens OSBP-related protein ... 75 7e-12 CR858950_1(CR858950|pid:none) Pongo abelii mRNA; cDNA DKFZp469P0... 75 7e-12 BX647211_1(BX647211|pid:none) Homo sapiens mRNA; cDNA DKFZp686C0... 75 7e-12 FN357309_27(FN357309|pid:none) Schistosoma mansoni genome sequen... 75 7e-12 AB040967_1(AB040967|pid:none) Homo sapiens mRNA for KIAA1534 pro... 74 1e-11 AK293000_1(AK293000|pid:none) Homo sapiens cDNA FLJ78486 complet... 74 1e-11 AK301003_1(AK301003|pid:none) Homo sapiens cDNA FLJ51506 complet... 74 1e-11 (Q9H0X9) RecName: Full=Oxysterol-binding protein-related protein... 74 1e-11 T38327(T38327) hypothetical protein SPAC23H4.01c - fission yeast... 74 2e-11 T20938(T20938)hypothetical protein F14H8.1 - Caenorhabditis eleg... 73 2e-11 BC161062_1(BC161062|pid:none) Xenopus tropicalis hypothetical pr... 72 5e-11 CR382131_930(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 70 2e-10 Z70269_4(Z70269|pid:none) Caenorhabditis elegans Cosmid ZK1086, ... 69 4e-10 Z70269_3(Z70269|pid:none) Caenorhabditis elegans Cosmid ZK1086, ... 69 4e-10 T27691(T27691)hypothetical protein ZK1086.1 - Caenorhabditis ele... 69 4e-10 EU730901_10(EU730901|pid:none) Brachypodium distachyon clone BAC... 69 5e-10 AM437268_1(AM437268|pid:none) Vitis vinifera contig VV78X171279.... 67 1e-09 CP000594_268(CP000594|pid:none) Ostreococcus lucimarinus CCE9901... 66 3e-09 (Q86KG4) RecName: Full=Oxysterol-binding protein 4; AltName: Ful... 66 3e-09 EF555118_1(EF555118|pid:none) Pholiota adiposa development prote... 48 4e-09 (Q9UW25) RecName: Full=Oxysterol-binding protein-like protein OB... 65 8e-09 FN357451_13(FN357451|pid:none) Schistosoma mansoni genome sequen... 45 1e-08 CP001576_533(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 64 1e-08 CR954215_198(CR954215|pid:none) Ostreococcus tauri strain OTTH05... 64 2e-08 AE016818_59(AE016818|pid:none) Ashbya gossypii (= Eremothecium g... 62 4e-08 AY961981_2(AY961981|pid:none) Candida parapsilosis PAPa (PAPa), ... 62 5e-08 CR382121_118(CR382121|pid:none) Kluyveromyces lactis strain NRRL... 60 1e-07 (Q54PS9) RecName: Full=Oxysterol-binding protein 9; Sho... 60 1e-07 BC017505_1(BC017505|pid:none) Homo sapiens, clone IMAGE:4873434,... 60 2e-07 BT071810_1(BT071810|pid:none) Drosophila melanogaster MIP02920 f... 60 2e-07 (Q54NM4) RecName: Full=Oxysterol-binding protein 10; AltName: Fu... 59 3e-07 (Q02201) RecName: Full=Oxysterol-binding protein homolog 6; &S2... 59 3e-07 CP000501_243(CP000501|pid:none) Pichia stipitis CBS 6054 chromos... 59 4e-07 (P38755) RecName: Full=Oxysterol-binding protein homolog 7; &AY... 58 7e-07 AF323726_1(AF323726|pid:none) Homo sapiens OSBP-related protein ... 57 1e-06 AK173174_1(AK173174|pid:none) Mus musculus mRNA for mKIAA1451 pr... 57 1e-06 (Q8MPQ7) RecName: Full=Oxysterol-binding protein 1; AltName: Ful... 57 2e-06 BT066934_1(BT066934|pid:none) Zea mays full-length cDNA clone ZM... 57 2e-06 AY224588_1(AY224588|pid:none) Oryza sativa (japonica cultivar-gr... 57 2e-06 AP008209_2382(AP008209|pid:none) Oryza sativa (japonica cultivar... 57 2e-06 FM992692_156(FM992692|pid:none) Candida dubliniensis CD36 chromo... 57 2e-06 CU928174_58(CU928174|pid:none) Zygosaccharomyces rouxii strain C... 56 4e-06 BC125949_1(BC125949|pid:none) Danio rerio oxysterol binding prot... 56 4e-06 BX255930_8(BX255930|pid:none) Zebrafish DNA sequence from clone ... 56 4e-06 AK220257_1(AK220257|pid:none) Mus musculus mRNA for mKIAA0772 pr... 55 5e-06 FN392319_1446(FN392319|pid:none) Pichia pastoris GS115 chromosom... 55 5e-06 (Q9UUA1) RecName: Full=Oxysterol-binding protein homolog C23B6.0... 55 5e-06 BT087879_1(BT087879|pid:none) Zea mays full-length cDNA clone ZM... 55 6e-06 BT034348_1(BT034348|pid:none) Zea mays full-length cDNA clone ZM... 38 8e-06 AB209872_1(AB209872|pid:none) Homo sapiens mRNA for oxysterol-bi... 54 1e-05 AK304067_1(AK304067|pid:none) Homo sapiens cDNA FLJ58351 complet... 54 1e-05 AK000370_1(AK000370|pid:none) Homo sapiens cDNA FLJ20363 fis, cl... 54 1e-05 (Q9BXB5) RecName: Full=Oxysterol-binding protein-related protein... 54 1e-05 AK097503_1(AK097503|pid:none) Homo sapiens cDNA FLJ40184 fis, cl... 54 1e-05 CR382127_84(CR382127|pid:none) Yarrowia lipolytica strain CLIB12... 54 2e-05 (Q54RM1) RecName: Full=Oxysterol-binding protein 7; AltName: Ful... 54 2e-05 BC119824_1(BC119824|pid:none) Bos taurus oxysterol binding prote... 54 2e-05 BC021507_1(BC021507|pid:none) Mus musculus oxysterol binding pro... 53 2e-05 AL627406_6(AL627406|pid:none) Mouse DNA sequence from clone RP23... 53 2e-05 AC149130_38(AC149130|pid:none) Medicago truncatula chromosome 2 ... 53 2e-05 AX392093_1(AX392093|pid:none) Sequence 3 from Patent WO0216433. ... 53 2e-05 (A2A8Z1) RecName: Full=Oxysterol-binding protein-related protein... 53 2e-05 AX392091_1(AX392091|pid:none) Sequence 1 from Patent WO0216433. ... 53 2e-05 AF000195_7(AF000195|pid:none) Caenorhabditis elegans cosmid C32F... 53 3e-05 FN357861_2(FN357861|pid:none) Schistosoma mansoni genome sequenc... 53 3e-05 BT069722_1(BT069722|pid:none) Zea mays full-length cDNA clone ZM... 53 3e-05 AP007151_1295(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 53 3e-05 AF000195_8(AF000195|pid:none) Caenorhabditis elegans cosmid C32F... 53 3e-05 AE017346_416(AE017346|pid:none) Cryptococcus neoformans var. neo... 53 3e-05 AK091703_1(AK091703|pid:none) Homo sapiens cDNA FLJ34384 fis, cl... 52 4e-05 AL049480_14(AL049480|pid:none) Arabidopsis thaliana DNA chromoso... 52 4e-05 AK056617_1(AK056617|pid:none) Homo sapiens cDNA FLJ32055 fis, cl... 52 4e-05 AK027707_1(AK027707|pid:none) Homo sapiens cDNA FLJ14801 fis, cl... 52 4e-05 BC027256_1(BC027256|pid:none) Mus musculus oxysterol binding pro... 52 4e-05 AK124037_1(AK124037|pid:none) Homo sapiens cDNA FLJ42043 fis, cl... 52 4e-05 AK128043_1(AK128043|pid:none) Homo sapiens cDNA FLJ46163 fis, cl... 52 4e-05 (Q5R9W4) RecName: Full=Oxysterol-binding protein-related protein... 52 4e-05 AX118917_1(AX118917|pid:none) Sequence 81 from Patent WO0129221.... 52 4e-05 AL050343_7(AL050343|pid:none) Human DNA sequence from clone RP4-... 52 4e-05 AK027535_1(AK027535|pid:none) Homo sapiens cDNA FLJ14629 fis, cl... 52 4e-05 AY622606_2(AY622606|pid:none) Candida dubliniensis MTL alpha 2, ... 52 4e-05 AL049480_13(AL049480|pid:none) Arabidopsis thaliana DNA chromoso... 51 9e-05 AK118071_1(AK118071|pid:none) Arabidopsis thaliana At4g25850 mRN... 51 9e-05 AM270143_14(AM270143|pid:none) Aspergillus niger contig An07c026... 51 9e-05 CP001330_456(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 50 1e-04 AC149130_34(AC149130|pid:none) Medicago truncatula chromosome 2 ... 50 3e-04 (Q9BXB4) RecName: Full=Oxysterol-binding protein-related protein... 50 3e-04 FN318031_1(FN318031|pid:none) Schistosoma japonicum isolate Anhu... 50 3e-04 FN318032_1(FN318032|pid:none) Schistosoma japonicum isolate Anhu... 50 3e-04 AX074158_1(AX074158|pid:none) Sequence 2 from Patent WO0104314. 49 4e-04 AB019233_5(AB019233|pid:none) Arabidopsis thaliana genomic DNA, ... 49 6e-04 BC092369_1(BC092369|pid:none) Xenopus tropicalis osbpl11 protein... 48 0.001 BC088747_1(BC088747|pid:none) Xenopus laevis hypothetical LOC496... 48 0.001 CP000588_357(CP000588|pid:none) Ostreococcus lucimarinus CCE9901... 48 0.001 (P0C199) RecName: Full=Protein KES1; 47 0.001 (Q8CI95) RecName: Full=Oxysterol-binding protein-related protein... 47 0.001 BC035278_1(BC035278|pid:none) Mus musculus oxysterol binding pro... 47 0.001 AB070092_1(AB070092|pid:none) Macaca fascicularis testis cDNA cl... 47 0.001 AB208851_1(AB208851|pid:none) Homo sapiens mRNA for oxysterol-bi... 47 0.002 BC168952_1(BC168952|pid:none) Rattus norvegicus oxysterol bindin... 47 0.002 BC034567_1(BC034567|pid:none) Mus musculus oxysterol binding pro... 47 0.002 AC151665_23(AC151665|pid:none) Medicago truncatula clone mth2-7k... 46 0.003 CU633438_317(CU633438|pid:none) Podospora anserina genomic DNA c... 46 0.003 AM270018_3(AM270018|pid:none) Aspergillus niger contig An02c0230... 46 0.003 EU971774_1(EU971774|pid:none) Zea mays clone 370394 unknown mRNA. 46 0.004 AK023074_1(AK023074|pid:none) Homo sapiens cDNA FLJ13012 fis, cl... 45 0.006 (Q86HV4) RecName: Full=Oxysterol-binding protein 6; AltName: Ful... 45 0.006 EF082814_1(EF082814|pid:none) Picea sitchensis clone WS0282_L18 ... 44 0.014 FN392319_1052(FN392319|pid:none) Pichia pastoris GS115 chromosom... 44 0.014 FN357480_15(FN357480|pid:none) Schistosoma mansoni genome sequen... 44 0.018 AK000267_1(AK000267|pid:none) Homo sapiens cDNA FLJ20260 fis, cl... 43 0.031 CU928178_289(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 42 0.040 T40287(T40287)hypothetical protein SPBC354.07c - fission yeast ... 42 0.053 CP000246_941(CP000246|pid:none) Clostridium perfringens ATCC 131... 40 0.26 AP007155_640(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 39 0.34 BC007004_1(BC007004|pid:none) Homo sapiens, Similar to oxysterol... 39 0.45 AY680534_1(AY680534|pid:none) Macaca mulatta clone ss1_k13_t7_31... 39 0.58 (O74178) RecName: Full=Protein kes1; &AL034353_4(AL034353|pid:n... 39 0.58 BT062037_1(BT062037|pid:none) Zea mays full-length cDNA clone ZM... 39 0.58 CU633457_28(CU633457|pid:none) Podospora anserina genomic DNA ch... 39 0.58 AM920435_820(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 28 0.65 CU633867_147(CU633867|pid:none) Podospora anserina genomic DNA c... 38 0.76 AY558047_1(AY558047|pid:none) Saccharomyces cerevisiae clone FLH... 38 0.76 CP001575_381(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 37 1.3 AX886861_1(AX886861|pid:none) Sequence 2724 from Patent EP1033401. 35 1.3 CR548612_129(CR548612|pid:none) Paramecium tetraurelia macronucl... 37 1.7 CP000678_1670(CP000678|pid:none) Methanobrevibacter smithii ATCC... 36 2.9 AM920433_128(AM920433|pid:none) Penicillium chrysogenum Wisconsi... 36 3.8 AL844508_239(AL844508|pid:none) Plasmodium falciparum 3D7 chromo... 35 4.9 DQ446399_1(DQ446399|pid:none) Arabidopsis thaliana clone pENTR22... 35 6.5 AC007234_5(AC007234|pid:none) Genomic sequence for Arabidopsis t... 35 6.5 DQ652914_1(DQ652914|pid:none) Arabidopsis thaliana clone 0000019... 35 6.5
>(Q54QP6) RecName: Full=Oxysterol-binding protein 8; AltName: Full=OSBPh; Length = 402
Score = 421 bits (1083), Expect(2) = e-131 Identities = 250/403 (62%), Positives = 271/403 (67%), Gaps = 33/403 (8%) Frame = +3
Query: 120 QRKGLLKQLSSYVGKDITSLISLPVWIFEPVSFLQVMSEPLQ*NALLSKASKQDSEFLCL 299 QRKGLLKQLSSYVGKDITSLISLPVWIFEPVSFLQVMSEPLQ NALLSKASKQDSEFLCL Sbjct: 35 QRKGLLKQLSSYVGKDITSLISLPVWIFEPVSFLQVMSEPLQYNALLSKASKQDSEFLCL 94
Query: 300 AYLAAFNCALYSTAVRTRKPFNPILGETFEIVDKKGEFRFLAEQVSHHPPIGVSETISED 479 AYLAAFNCALYSTAVRTRKPFNPILGETFEIVDKKGEFRFLAEQVSHHPPIGVSETISED Sbjct: 95 AYLAAFNCALYSTAVRTRKPFNPILGETFEIVDKKGEFRFLAEQVSHHPPIGVSETISED 154
Query: 480 YTLQLETLLKSKFYGNSSEVEIDGTNHFFNKKTNHHYTWNHLVTLLS*HYHWFIMVGSLW 659 YTLQLETLLKSKFYGNSSEVEIDGTNHFFNKKTNHHYTWNHLVT I++GSLW Sbjct: 155 YTLQLETLLKSKFYGNSSEVEIDGTNHFFNKKTNHHYTWNHLVTCCH-----NIIIGSLW 209
Query: 660 *FSHRKSHY-------R*QGSTQIC*IWLVRCRSLWCHW*KLWIVKVMLDTESLVNGMNP 818 HY GS + L +S W + + ++D E V Sbjct: 210 -----LDHYGDLVIENHTTGSKAV----LKFAKSGWLGAGRYGVTGEIVDCEGDVR---- 256
Query: 819 FNYSKSWIMVHPLPLPLVFGKPAKNQSIINFYSQD-GSKKTLLISTMNTKR-----YYQS 980 + + W N+SI F D GS T + + Sbjct: 257 YRITGKW-----------------NESIQLFQVMDNGSSSTTSTCLWEASKEPINNKFLF 299
Query: 981 PILVLEQIVSL---*KKVTWM--SQLKKEKHNLE---------------EKQREDKRQRV 1100 P V E ++ L KK+ + S+L+ ++ LE EKQREDKRQRV Sbjct: 300 PRWVEENVIDLNDEYKKILPVTDSRLRADRIALEEGNLDVAAKEKHNLEEKQREDKRQRV 359
Query: 1101 AENKEWETAQFKKVADAKFGYRWNYCGNYWEEREERVKAAASN 1229 AENKEWETAQFKKV DAKFGYRWNYCGNYWEEREERVKAAASN Sbjct: 360 AENKEWETAQFKKVDDAKFGYRWNYCGNYWEEREERVKAAASN 402
Score = 72.0 bits (175), Expect(2) = e-131 Identities = 33/42 (78%), Positives = 36/42 (85%) Frame = +2
Query: 20 FQGALNYMKGLVGTNENLQVEESGDNKGDIEPXAKKGFTQTI 145 F GALNYMKGLVGTNENLQVEESGDNKGDIEP +KG + + Sbjct: 2 FSGALNYMKGLVGTNENLQVEESGDNKGDIEPEQRKGLLKQL 43
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3204285 Number of Hits to DB: 1,976,143,226 Number of extensions: 39010957 Number of successful extensions: 105890 Number of sequences better than 10.0: 288 Number of HSP's gapped: 105002 Number of HSP's successfully gapped: 639 Length of query: 465 Length of database: 1,040,966,779 Length adjustment: 132 Effective length of query: 333 Effective length of database: 618,001,159 Effective search space: 205794385947 Effective search space used: 205794385947 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 32 (16.9 bits)
|
PSORT |
|
VS (DIR, S) |
2 |
VH (FL, L) |
0 |
VF (FL, S) |
1 |
AH (FL, L) |
0 |
AF (FL, S) |
0 |
SL (DIR, L) |
0 |
SS (DIR, S) |
2 |
SH (FL, L) |
0 |
SF (FL, S) |
1 |
CH (FL, L) |
0 |
CF (FL, S) |
0 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
0 |
FC-IC (SUB) |
0 |