Contig-U10133-1
Contig ID Contig-U10133-1
Contig update 2002. 9.13
Contig sequence
>Contig-U10133-1 (Contig-U10133-1Q) /CSM_Contig/Contig-U10133-1Q.Seq.d
AAAATTAAATTTTAATTTTCAATTCATTTTTTTTTTTTAACAAATAAAAC
AATTATTAAAATAAAATTAAATTTAGGAAGGTCATCTGATAAAGGAACTG
AAAATAAACCAAAAACCATTAATTTTAATGATGAATTAGATAAAAAAGGT
TCTTTCATACGTGTTCAAAGTTCATTCCGTAATTTTATTTCATCAAATCC
AGATGCAGAGTTTAAACCAGAAGCAAATCGTTATCATATTTATATCTCTC
TTGCTTGTCCATGGGCATCTTCAGTTTATTTAACTTTAGAAATGAAAGGA
TTACAAGATGTAATTGGTGTTTCAATTGTAGATTATTTATTACAAGAGGG
TGGTTGGCATTTTTCTGAAAGGGAAGGTTCAACAGTAGATAAAATTAATG
GATTCAATTTTTTAAGACAAGTCTATGAGCTCTCTGATAAAAACTTTAAT
GGACGTGTTACCGTACCTGTACTTTTTGATACCAAAACTAAAAAGATTGT
CAACAATGAATCACCAGAAATCATTCGTATGCTCAATAGTGAATTCAATC
AATTCGCTAAACATCCAGAAATTGATTTAAACCCAACTGAATTACAAACT
CAAATTCAAGAAATCTATGATTTCATCTATCCAAATATTAACAATGGCGT
TTATCGTTGTGGTTTTGCAATCTCTCAAGAAGCTTACTCTGATGCTTTTG
AAAAATTATTTAATGCTTTAGATAAAGCTGAAGATATCTTATCAAAACAA
CGTTATTTAGTTGGTTCAAAATTTACTTATGTTGATATTAGATTATTTGT
CACATTAATTAGATTTGATTGTGTCTATGTTGGTCATTTCAAATGTAATA
AAAAACAAATCAAAGAATATCCAAATCTTTCAAACTTTGTTCGTGAAATC
TATCAAATGGAAGGTACTAAAAAGACTGTAGACTTTTTCCATATTAAACA
TCATTATTATGAATCTCATAGAACCATCAATCCATACGGTATCGTTCCAG
TTGGTCCAAATATGGACTGGGTTAATGAACCACACAACCGTGCAAACCTT
TAAAAAATTTTCAAGGATAAATAAAAAAAATATATGTATTTAATGTTTAC
TATTACTACTATTATTTGAACCTTTATCAACCAATTATAGTTTGGAATTG
TAAAGAATATTAATTTTCTTTATTNAATTCGAATAAATCTTTTTAAT

Gap no gap
Contig length 1197
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 4286745
End point 4287897
Strand (PLUS/MINUS) PLUS
Number of clones 11
Number of EST 16
Link to clone list U10133
List of clone(s)

est1=VFL378F,-10,146
est2=SFA302F,23,513
est3=VFE708F,39,538
est4=VFI424E,39,1198
est5=VFD853E,40,1174
est6=VFB270E,45,1195
est7=VFK688E,46,1170
est8=SFH780F,59,458
est9=VFJ560F,63,425
est10=VFO260Z,455,1180
est11=VFJ560Z,458,1170
est12=SFA302Z,484,1081
est13=VFL378Z,508,1171
est14=VFE708Z,579,1162
est15=SSD866Z,688,1134
est16=SFH780Z,692,1165
Translated Amino Acid sequence
kikf*FSIHFFFLTNKTIIKIKLNLGRSSDKGTENKPKTINFNDELDKKGSFIRVQSSFR
NFISSNPDAEFKPEANRYHIYISLACPWASSVYLTLEMKGLQDVIGVSIVDYLLQEGGWH
FSEREGSTVDKINGFNFLRQVYELSDKNFNGRVTVPVLFDTKTKKIVNNESPEIIRMLNS
EFNQFAKHPEIDLNPTELQTQIQEIYDFIYPNINNGVYRCGFAISQEAYSDAFEKLFNAL
DKAEDILSKQRYLVGSKFTYVDIRLFVTLIRFDCVYVGHFKCNKKQIKEYPNLSNFVREI
YQMEGTKKTVDFFHIKHHYYESHRTINPYGIVPVGPNMDWVNEPHNRANL*kifkdk*kk
ymylmftittii*tfinql*fgivkninflyxirinlfn


Translated Amino Acid sequence (All Frames)
Frame A:
kikf*FSIHFFFLTNKTIIKIKLNLGRSSDKGTENKPKTINFNDELDKKGSFIRVQSSFR
NFISSNPDAEFKPEANRYHIYISLACPWASSVYLTLEMKGLQDVIGVSIVDYLLQEGGWH
FSEREGSTVDKINGFNFLRQVYELSDKNFNGRVTVPVLFDTKTKKIVNNESPEIIRMLNS
EFNQFAKHPEIDLNPTELQTQIQEIYDFIYPNINNGVYRCGFAISQEAYSDAFEKLFNAL
DKAEDILSKQRYLVGSKFTYVDIRLFVTLIRFDCVYVGHFKCNKKQIKEYPNLSNFVREI
YQMEGTKKTVDFFHIKHHYYESHRTINPYGIVPVGPNMDWVNEPHNRANL*kifkdk*kk
ymylmftittii*tfinql*fgivkninflyxirinlfn


Frame B:
klnfnfqfifff*qikqllk*n*i*eghlikelkinqkplilmmn*ikkvlsyvfkvhsv
ilfhqiqmqslnqkqiviifislllvhghlqfi*l*k*kdykm*lvfql*iiyykrvvgi
flkgkvqq*iklmdsif*dksmssliktlmdvlpylyflipklkrlstmnhqksfvcsiv
nsinslniqkli*tqlnyklkfkksmissiqiltmafivvvlqslkkltlmllknylml*
iklkisyqnnvi*lvqnllmlildylsh*ldlivsmlvisnviknkskniqifqtlfvks
ikwkvlkrl*tfsilniiimnliepsihtvsfqlvqiwtglmnhttvqtfkkfsrinkkn
ici*cllllllfeplstnyslel*riliffixfe*ifl


Frame C:
n*ilifnsffffnk*nny*nkikfrkvi**rn*k*tknh*f***ir*krffhtcskfip*
fyfiksrcrv*trskslsylylsclsmgifslfnfrneritrcnwcfncrlfitrgwlaf
f*kgrfnsr*n*wiqffktsl*al**kl*wtcyrtctf*yqn*kdcqq*itrnhsyaq**
iqsir*tsrn*fkpn*itnsnsrnl*fhlsky*qwrlslwfcnlsrsll*cf*kii*cfr
*s*rylikttlfswfkiylc*y*iichin*i*lclcwsfqm**ktnqrisksfklcs*nl
sngry*kdcrlfpy*tsll*is*nhqsiryrsswskyglg**ttqpckplknfqg*ikki
yvfnvyyyyyylnlyqpiivwnckey*fslxnsnksf*


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U10133-1 (Contig-U10133-1Q)
/CSM_Contig/Contig-U10133-1Q.Seq.d
(1197 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U10133-1 (Contig-U10133-1Q) /CSM_Contig/Conti... 2248 0.0
Contig-U09376-1 (Contig-U09376-1Q) /CSM_Contig/Conti... 46 9e-05
Contig-U13034-1 (Contig-U13034-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U09461-1 (Contig-U09461-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U11734-1 (Contig-U11734-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U06959-1 (Contig-U06959-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U06439-1 (Contig-U06439-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U14822-1 (Contig-U14822-1Q) /CSM_Contig/Conti... 38 0.021
Contig-U13171-1 (Contig-U13171-1Q) /CSM_Contig/Conti... 38 0.021
Contig-U11489-1 (Contig-U11489-1Q) /CSM_Contig/Conti... 38 0.021

>Contig-U10133-1 (Contig-U10133-1Q) /CSM_Contig/Contig-U10133-1Q.Seq.d
Length = 1197

Score = 2248 bits (1134), Expect = 0.0
Identities = 1177/1197 (98%)
Strand = Plus / Plus


Query: 1 aaaattaaattttaattttcaattcannnnnnnnnnnnaacaaataaaacaattattaaa 60
|||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 aaaattaaattttaattttcaattcattttttttttttaacaaataaaacaattattaaa 60


Query: 61 ataaaattaaatttaggaaggtcatctgataaaggaactgaaaataaaccaaaaaccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ataaaattaaatttaggaaggtcatctgataaaggaactgaaaataaaccaaaaaccatt 120


Query: 121 aattttaatgatgaattagataaaaaaggttctttcatacgtgttcaaagttcattccgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aattttaatgatgaattagataaaaaaggttctttcatacgtgttcaaagttcattccgt 180


Query: 181 aattttatttcatcaaatccagatgcagagtttaaaccagaagcaaatcgttatcatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aattttatttcatcaaatccagatgcagagtttaaaccagaagcaaatcgttatcatatt 240


Query: 241 tatatctctcttgcttgtccatgggcatcttcagtttatttaactttagaaatgaaagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tatatctctcttgcttgtccatgggcatcttcagtttatttaactttagaaatgaaagga 300


Query: 301 ttacaagatgtaattggtgtttcaattgtagattatttattacaagagggtggttggcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttacaagatgtaattggtgtttcaattgtagattatttattacaagagggtggttggcat 360


Query: 361 ttttctgaaagggaaggttcaacagtagataaaattaatggattcaattttttaagacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttttctgaaagggaaggttcaacagtagataaaattaatggattcaattttttaagacaa 420


Query: 421 gtctatgagctctctgataaaaactttaatggacgtgttaccgtacctgtactttttgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtctatgagctctctgataaaaactttaatggacgtgttaccgtacctgtactttttgat 480


Query: 481 accaaaactaaaaagattgtcaacaatgaatcaccagaaatcattcgtatgctcaatagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 accaaaactaaaaagattgtcaacaatgaatcaccagaaatcattcgtatgctcaatagt 540


Query: 541 gaattcaatcaattcgctaaacatccagaaattgatttaaacccaactgaattacaaact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaattcaatcaattcgctaaacatccagaaattgatttaaacccaactgaattacaaact 600


Query: 601 caaattcaagaaatctatgatttcatctatccaaatattaacaatggcgtttatcgttgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 caaattcaagaaatctatgatttcatctatccaaatattaacaatggcgtttatcgttgt 660


Query: 661 ggttttgcaatctctcaagaagcttactctgatgcttttgaaaaattatttaatgcttta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ggttttgcaatctctcaagaagcttactctgatgcttttgaaaaattatttaatgcttta 720


Query: 721 gataaagctgaagatatcttatcaaaacaacgttatttagttggttcaaaatttacttat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gataaagctgaagatatcttatcaaaacaacgttatttagttggttcaaaatttacttat 780


Query: 781 gttgatattagattatttgtcacattaattagatttgattgtgtctatgttggtcatttc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gttgatattagattatttgtcacattaattagatttgattgtgtctatgttggtcatttc 840


Query: 841 aaatgtaataaaaaacaaatcaaagaatatccaaatctttcaaactttgttcgtgaaatc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aaatgtaataaaaaacaaatcaaagaatatccaaatctttcaaactttgttcgtgaaatc 900


Query: 901 tatcaaatggaaggtactaaaaagactgtagactttttccatattaaacatcattattat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 tatcaaatggaaggtactaaaaagactgtagactttttccatattaaacatcattattat 960


Query: 961 gaatctcatagaaccatcaatccatacggtatcgttccagttggtccaaatatggactgg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gaatctcatagaaccatcaatccatacggtatcgttccagttggtccaaatatggactgg 1020


Query: 1021 gttaatgaaccacacaaccgtgcaaacctttaaaaaattttcaaggataaatnnnnnnnn 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gttaatgaaccacacaaccgtgcaaacctttaaaaaattttcaaggataaataaaaaaaa 1080


Query: 1081 tatatgtatttaatgtttactattactactattatttgaacctttatcaaccaattatag 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 tatatgtatttaatgtttactattactactattatttgaacctttatcaaccaattatag 1140


Query: 1141 tttggaattgtaaagaatattaattttctttattnaattcgaataaatctttttaat 1197
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 tttggaattgtaaagaatattaattttctttattnaattcgaataaatctttttaat 1197


>Contig-U09376-1 (Contig-U09376-1Q) /CSM_Contig/Contig-U09376-1Q.Seq.d
Length = 889

Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus


Query: 46 aaaacaattattaaaataaaattaaat 72
||||||||| |||||||||||||||||
Sbjct: 4 aaaacaatttttaaaataaaattaaat 30


>Contig-U13034-1 (Contig-U13034-1Q) /CSM_Contig/Contig-U13034-1Q.Seq.d
Length = 501

Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 55 attaaaataaaattaaattta 75
|||||||||||||||||||||
Sbjct: 395 attaaaataaaattaaattta 415


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 26,181
Number of Sequences: 6905
Number of extensions: 26181
Number of successful extensions: 3270
Number of sequences better than 10.0: 496
length of query: 1197
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1181
effective length of database: 5,564,391
effective search space: 6571545771
effective search space used: 6571545771
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.18
Homology vs DNA
Query= Contig-U10133-1 (Contig-U10133-1Q) /CSM_Contig/Contig-U10133-1Q.Seq.d
(1197 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ436032) Dictyostelium discoideum cDNA clone:ddv29g16, 3' ... 1225 0.0 3
(BJ431978) Dictyostelium discoideum cDNA clone:ddv17p06, 3' ... 1215 0.0 2
(BJ433035) Dictyostelium discoideum cDNA clone:ddv20g15, 3' ... 1213 0.0 3
(BJ429481) Dictyostelium discoideum cDNA clone:ddv3k18, 3' e... 1132 0.0 4
(BJ434104) Dictyostelium discoideum cDNA clone:ddv23l19, 3' ... 1120 0.0 2
(BJ415555) Dictyostelium discoideum cDNA clone:ddv22o22, 5' ... 1120 0.0 2
(BJ433793) Dictyostelium discoideum cDNA clone:ddv22o22, 3' ... 1118 0.0 2
(BJ413865) Dictyostelium discoideum cDNA clone:ddv17p06, 5' ... 1116 0.0 2
(BJ412472) Dictyostelium discoideum cDNA clone:ddv8j14, 5' e... 1086 0.0 2
(BJ427957) Dictyostelium discoideum cDNA clone:ddv10p01, 3' ... 973 0.0 2
(BJ398575) Dictyostelium discoideum cDNA clone:dds1d01, 3' e... 946 0.0 2
(BJ430756) Dictyostelium discoideum cDNA clone:ddv8j14, 3' e... 567 0.0 3
(BJ411259) Dictyostelium discoideum cDNA clone:ddv3k18, 5' e... 950 0.0 2
(BJ409839) Dictyostelium discoideum cDNA clone:ddv10p01, 5' ... 908 0.0 2
(BJ387243) Dictyostelium discoideum cDNA clone:dds1d01, 5' e... 852 0.0 2
(BJ402446) Dictyostelium discoideum cDNA clone:dds16p19, 3' ... 700 0.0 2
(AU037624) Dictyostelium discoideum slug cDNA, clone SSD866. 749 0.0 3
(BJ388971) Dictyostelium discoideum cDNA clone:dds16p19, 5' ... 412 0.0 2
(BJ414839) Dictyostelium discoideum cDNA clone:ddv20g15, 5' ... 640 e-179 1
(BJ415834) Dictyostelium discoideum cDNA clone:ddv23l19, 5' ... 184 2e-51 2
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 36 9e-07 16
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 40 2e-05 14
(DQ774123) Synthetic construct Vibrio cholerae clone FLH2007... 56 9e-05 2
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 46 2e-04 16
(AL121759) Human DNA sequence from clone RP5-872K7 on chromo... 48 2e-04 2
(BA000016) Clostridium perfringens str. 13 DNA, complete gen... 36 8e-04 18
(CP000963) Clostridium botulinum A3 str. Loch Maree plasmid ... 34 9e-04 15
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 32 0.002 15
(CP000627) Vibrio cholerae O395 chromosome 2, complete genome. 56 0.003 1
(AE003852) Vibrio cholerae O1 biovar eltor str. N16961 chrom... 56 0.003 1
(CS468856) Sequence 47 from Patent EP1748080. 36 0.006 7
(CS419333) Sequence 47 from Patent WO2006094836. 36 0.006 7
(AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6... 36 0.007 3
(AC182158) Bos taurus clone CH240-513H6, WORKING DRAFT SEQUE... 38 0.008 2
(EC725683) MJE00005707 Malawimonas jakobiformis Home made (1... 40 0.009 3
(AC168005) Bos taurus clone CH240-208I21, WORKING DRAFT SEQU... 38 0.009 2
(CP000246) Clostridium perfringens ATCC 13124, complete genome. 38 0.010 17
(EJ519333) 1092955124362 Global-Ocean-Sampling_GS-29-01-01-1... 44 0.016 2
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975... 34 0.028 9
(ER464918) 1092963916440 Global-Ocean-Sampling_GS-35-01-01-1... 36 0.029 3
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 48 0.033 19
(EF116866) Apis mellifera African(A) evolutionary lineage 16... 36 0.040 2
(EF116867) Apis mellifera European (M) lineage 16S ribosomal... 36 0.040 2
(CU074419) Zebrafish DNA sequence from clone CH73-234B20 in ... 52 0.050 1
(BX936392) Zebrafish DNA sequence from clone CH211-197O16 in... 52 0.050 1
(AL935311) Zebrafish DNA sequence from clone CH211-241N16. 52 0.050 1
(CU633396) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 52 0.050 1
(AC203004) Zea mays chromosome 1 clone CH201-155D2; ZMMBBc01... 52 0.050 1
(AC186167) Zea mays chromosome 1 clone CH201-112E13; ZMMBBc0... 52 0.050 1
(BJ998882) Lentinula edodes cDNA, clone:LeEST0786. 52 0.050 1
(BJ998800) Lentinula edodes cDNA, clone:LeEST0704. 52 0.050 1
(EK293727) 1095462339446 Global-Ocean-Sampling_GS-31-01-01-1... 44 0.057 2
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 38 0.067 12
(AE014852) Plasmodium falciparum 3D7 chromosome 12, section ... 40 0.067 10
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 36 0.070 11
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 34 0.073 14
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 34 0.073 15
(CR382400) Plasmodium falciparum chromosome 6, complete sequ... 36 0.10 12
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 32 0.11 13
(CT501373) A BAC library has been constructed from cultivar ... 34 0.11 3
(AP006628) Onion yellows phytoplasma OY-M DNA, complete genome. 38 0.11 16
(AY916130) Epidermophyton floccosum mitochondrion, complete ... 34 0.12 7
(AP006442) Homo sapiens genomic DNA, chromosome 11 clone:CMB... 38 0.12 2
(BX000706) Zebrafish DNA sequence from clone CH211-204D18 in... 36 0.12 2
(AC006279) Plasmodium falciparum chromosome 12 clone 3D7, **... 40 0.13 10
(EU237489) Vaceletia sp. GW948 mitochondrion, complete genome. 40 0.13 2
(CU280887) Zebrafish DNA sequence from clone DKEY-76B14 in l... 38 0.13 7
(FG167920) AGN_RNC006xa20f1.ab1 AGN_RNC Nicotiana tabacum cD... 38 0.13 3
(FG173385) AGN_RNC126xp15f1.ab1 AGN_RNC Nicotiana tabacum cD... 38 0.13 3
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 36 0.14 11
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 36 0.15 20
(DW003206) KR3B.105C05F.051109T7 KR3B Nicotiana tabacum cDNA... 38 0.15 3
(CK234063) re23e03.y1 Meloidogyne incognita parasitic J2 J3 ... 40 0.15 2
(BW528101) Ciona savignyi cDNA, clone:cslv004m05, 5'end, sin... 48 0.15 2
(CK984487) re38a11.y1 Meloidogyne incognita J3 J4 SL1 pGEM M... 40 0.15 2
(FG158523) AGN_RNC023xk23f1.ab1 AGN_RNC Nicotiana tabacum cD... 38 0.15 3
(CK984469) re37h01.y1 Meloidogyne incognita J3 J4 SL1 pGEM M... 40 0.15 2
(CN443259) re64d09.y1 Meloidogyne incognita J3 J4 SL1 pGEM M... 40 0.15 2
(CN577983) re48h06.y1 Meloidogyne incognita female SMART pGE... 40 0.15 2
(CF803132) rd94d10.y1 Meloidogyne incognita female SL1 pGEM ... 40 0.15 2
(CK984634) re44b07.y2 Meloidogyne incognita J3 J4 SL1 pGEM M... 40 0.15 2
(CN443131) re58d10.y1 Meloidogyne incognita J3 J4 SL1 pGEM M... 40 0.15 2
(CD749366) rd53b06.y1 Meloidogyne incognita parasitic adult ... 40 0.15 2
(CF802989) rd92d04.y1 Meloidogyne incognita female SL1 pGEM ... 40 0.15 2
(CN443429) re67b04.y1 Meloidogyne incognita J3 J4 SL1 pGEM M... 40 0.15 2
(CN443102) re58b03.y1 Meloidogyne incognita J3 J4 SL1 pGEM M... 40 0.15 2
(CN443041) re57d05.y1 Meloidogyne incognita J3 J4 SL1 pGEM M... 40 0.15 2
(CK984916) re47e07.y2 Meloidogyne incognita J3 J4 SL1 pGEM M... 40 0.15 2
(CK984809) re46b11.y2 Meloidogyne incognita J3 J4 SL1 pGEM M... 40 0.15 2
(CK984795) re46a09.y2 Meloidogyne incognita J3 J4 SL1 pGEM M... 40 0.15 2
(CF980461) re05c03.y1 Meloidogyne incognita female SL1 pGEM ... 40 0.15 2
(CF981035) re02a05.y1 Meloidogyne incognita female SL1 pGEM ... 40 0.15 2
(CF803146) rd94f04.y1 Meloidogyne incognita female SL1 pGEM ... 40 0.15 2
(CF802982) rd92c07.y1 Meloidogyne incognita female SL1 pGEM ... 40 0.15 2
(CF802945) rd91f11.y1 Meloidogyne incognita female SL1 pGEM ... 40 0.15 2
(CF803211) rd95e10.y1 Meloidogyne incognita female SL1 pGEM ... 40 0.15 2
(CF981055) re02c08.y1 Meloidogyne incognita female SL1 pGEM ... 40 0.15 2
(CF803217) rd95f05.y1 Meloidogyne incognita female SL1 pGEM ... 40 0.15 2
(CK983923) re31a04.y1 Meloidogyne incognita female SMART pGE... 40 0.15 2
(CF981010) re01g01.y1 Meloidogyne incognita female SL1 pGEM ... 40 0.15 2

>(BJ436032) Dictyostelium discoideum cDNA clone:ddv29g16, 3' end,
single read.
Length = 723

Score = 1225 bits (618), Expect(3) = 0.0
Identities = 618/618 (100%)
Strand = Plus / Minus


Query: 455 gtgttaccgtacctgtactttttgataccaaaactaaaaagattgtcaacaatgaatcac 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 gtgttaccgtacctgtactttttgataccaaaactaaaaagattgtcaacaatgaatcac 664


Query: 515 cagaaatcattcgtatgctcaatagtgaattcaatcaattcgctaaacatccagaaattg 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 cagaaatcattcgtatgctcaatagtgaattcaatcaattcgctaaacatccagaaattg 604


Query: 575 atttaaacccaactgaattacaaactcaaattcaagaaatctatgatttcatctatccaa 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 atttaaacccaactgaattacaaactcaaattcaagaaatctatgatttcatctatccaa 544


Query: 635 atattaacaatggcgtttatcgttgtggttttgcaatctctcaagaagcttactctgatg 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 atattaacaatggcgtttatcgttgtggttttgcaatctctcaagaagcttactctgatg 484


Query: 695 cttttgaaaaattatttaatgctttagataaagctgaagatatcttatcaaaacaacgtt 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 cttttgaaaaattatttaatgctttagataaagctgaagatatcttatcaaaacaacgtt 424


Query: 755 atttagttggttcaaaatttacttatgttgatattagattatttgtcacattaattagat 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 atttagttggttcaaaatttacttatgttgatattagattatttgtcacattaattagat 364


Query: 815 ttgattgtgtctatgttggtcatttcaaatgtaataaaaaacaaatcaaagaatatccaa 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ttgattgtgtctatgttggtcatttcaaatgtaataaaaaacaaatcaaagaatatccaa 304


Query: 875 atctttcaaactttgttcgtgaaatctatcaaatggaaggtactaaaaagactgtagact 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atctttcaaactttgttcgtgaaatctatcaaatggaaggtactaaaaagactgtagact 244


Query: 935 ttttccatattaaacatcattattatgaatctcatagaaccatcaatccatacggtatcg 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ttttccatattaaacatcattattatgaatctcatagaaccatcaatccatacggtatcg 184


Query: 995 ttccagttggtccaaatatggactgggttaatgaaccacacaaccgtgcaaacctttaaa 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ttccagttggtccaaatatggactgggttaatgaaccacacaaccgtgcaaacctttaaa 124


Query: 1055 aaattttcaaggataaat 1072
||||||||||||||||||
Sbjct: 123 aaattttcaaggataaat 106

Score = 123 bits (62), Expect(3) = 0.0
Identities = 62/62 (100%)
Strand = Plus / Minus


Query: 1081 tatatgtatttaatgtttactattactactattatttgaacctttatcaaccaattatag 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 tatatgtatttaatgtttactattactactattatttgaacctttatcaaccaattatag 38


Query: 1141 tt 1142
||
Sbjct: 37 tt 36

Score = 42.1 bits (21), Expect(3) = 0.0
Identities = 21/21 (100%)
Strand = Plus / Minus


Query: 1142 ttggaattgtaaagaatatta 1162
|||||||||||||||||||||
Sbjct: 37 ttggaattgtaaagaatatta 17

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,684,097,104
Number of extensions: 111848385
Number of successful extensions: 10248447
Number of sequences better than 10.0: 519
Length of query: 1197
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1173
Effective length of database: 97,308,875,965
Effective search space: 114143311506945
Effective search space used: 114143311506945
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.27
Homology vs Protein
Query= Contig-U10133-1 (Contig-U10133-1Q) /CSM_Contig/Contig-U10133-1Q.Seq.d
(1197 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC147481_6(AC147481|pid:none) Medicago truncatula chromosome 2 c... 342 2e-92
CP000758_1588(CP000758|pid:none) Ochrobactrum anthropi ATCC 4918... 325 2e-87
AF370272_1(AF370272|pid:none) Arabidopsis thaliana unknown prote... 323 7e-87
CP000806_3181(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 323 7e-87
EF078692_6(EF078692|pid:none) Azoarcus anaerobius transposase ge... 318 2e-85
BA000012_2159(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 314 3e-84
CP000393_3966(CP000393|pid:none) Trichodesmium erythraeum IMS101... 314 4e-84
AL766847_54(AL766847|pid:none) Streptococcus agalactiae NEM316 c... 314 4e-84
CP000094_3576(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 314 4e-84
AE003852_1077(AE003852|pid:none) Vibrio cholerae O1 biovar eltor... 312 1e-83
CP000949_3380(CP000949|pid:none) Pseudomonas putida W619, comple... 312 1e-83
EU960881_1(EU960881|pid:none) Zea mays clone 229366 glutathione ... 311 2e-83
CP000708_1386(CP000708|pid:none) Brucella ovis ATCC 25840 chromo... 309 1e-82
CP001287_3594(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 309 1e-82
CP000407_635(CP000407|pid:none) Streptococcus suis 05ZYH33, comp... 309 1e-82
AE016795_2857(AE016795|pid:none) Vibrio vulnificus CMCP6 chromos... 309 1e-82
CP000352_1653(CP000352|pid:none) Ralstonia metallidurans CH34, c... 309 1e-82
AE016853_3267(AE016853|pid:none) Pseudomonas syringae pv. tomato... 309 1e-82
CP000090_1443(CP000090|pid:none) Ralstonia eutropha JMP134 chrom... 308 2e-82
CT573326_2040(CT573326|pid:none) Pseudomonas entomophila str. L4... 308 3e-82
CP000911_1537(CP000911|pid:none) Brucella suis ATCC 23445 chromo... 308 3e-82
BA000037_1209(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, ch... 307 5e-82
CP001488_1493(CP001488|pid:none) Brucella melitensis ATCC 23457 ... 307 5e-82
CP000680_2363(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 306 7e-82
AM181176_3710(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 306 7e-82
CU234118_4227(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 306 7e-82
CP000076_3823(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 306 9e-82
AE008917_454(AE008917|pid:none) Brucella melitensis 16M chromoso... 306 1e-81
CP000926_3578(CP000926|pid:none) Pseudomonas putida GB-1, comple... 305 2e-81
CP000744_2566(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 304 4e-81
AE004091_2611(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 304 5e-81
CP000438_2429(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 303 8e-81
CP000270_1431(CP000270|pid:none) Burkholderia xenovorans LB400 c... 301 2e-80
FM954972_903(FM954972|pid:none) Vibrio splendidus LGP32 chromoso... 301 4e-80
CP000628_2436(CP000628|pid:none) Agrobacterium radiobacter K84 c... 300 9e-80
CP000075_3172(CP000075|pid:none) Pseudomonas syringae pv. syring... 299 1e-79
CP000712_1811(CP000712|pid:none) Pseudomonas putida F1, complete... 298 2e-79
AM236080_3506(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 298 3e-79
AE017340_827(AE017340|pid:none) Idiomarina loihiensis L2TR, comp... 297 6e-79
CP000494_4402(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 296 1e-78
CP001389_2295(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 296 1e-78
CP000133_3021(CP000133|pid:none) Rhizobium etli CFN 42, complete... 294 4e-78
CP001339_689(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, c... 293 8e-78
CP000901_1017(CP000901|pid:none) Yersinia pestis Angola, complet... 293 1e-77
CP000964_571(CP000964|pid:none) Klebsiella pneumoniae 342, compl... 291 3e-77
AM039952_637(AM039952|pid:none) Xanthomonas campestris pv. vesic... 290 5e-77
FM178379_1201(FM178379|pid:none) Aliivibrio salmonicida LFI1238 ... 290 5e-77
CU928158_4196(CU928158|pid:none) Escherichia fergusonii ATCC 354... 290 7e-77
AM180088_281(AM180088|pid:none) Haloquadratum walsbyi DSM 16790 ... 290 7e-77
CR954247_101(CR954247|pid:none) Pseudoalteromonas haloplanktis s... 290 9e-77
AP006725_4382(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 289 1e-76
CP001344_1776(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 289 2e-76
AM286415_3565(AM286415|pid:none) Yersinia enterocolitica subsp. ... 288 2e-76
CP001074_3176(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 288 3e-76
BA000022_3162(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 288 3e-76
CP000304_1948(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 288 3e-76
CP001001_816(CP001001|pid:none) Methylobacterium radiotolerans J... 288 3e-76
AP009384_3957(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 288 3e-76
AE009952_110(AE009952|pid:none) Yersinia pestis KIM, complete ge... 287 4e-76
CP001138_3185(CP001138|pid:none) Salmonella enterica subsp. ente... 285 2e-75
CP000802_3117(CP000802|pid:none) Escherichia coli HS, complete g... 285 2e-75
CP000034_3054(CP000034|pid:none) Shigella dysenteriae Sd197, com... 285 2e-75
A97631(A97631)hypothetical 37.4K protein in exuR-tdcC intergenic... 285 3e-75
AD2854(AD2854) conserved hypothetical protein Atu2261 [imported]... 285 3e-75
CP000886_3920(CP000886|pid:none) Salmonella enterica subsp. ente... 285 3e-75
CP000783_3429(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 285 3e-75
AL591688_2379(AL591688|pid:none) Sinorhizobium meliloti 1021 com... 285 3e-75
AM933172_3060(AM933172|pid:none) Salmonella enterica subsp. ente... 285 3e-75
AE006468_3142(AE006468|pid:none) Salmonella enterica subsp. ente... 284 4e-75
CP000497_112(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 284 4e-75
AE014613_2949(AE014613|pid:none) Salmonella enterica subsp. ente... 283 6e-75
CP001113_3272(CP001113|pid:none) Salmonella enterica subsp. ente... 283 6e-75
CP000285_1128(CP000285|pid:none) Chromohalobacter salexigens DSM... 283 8e-75
CU928163_3513(CU928163|pid:none) Escherichia coli UMN026 chromos... 283 8e-75
CP000800_3401(CP000800|pid:none) Escherichia coli E24377A, compl... 283 8e-75
(P42620) RecName: Full=Uncharacterized protein yqjG; &AP009048_... 283 8e-75
CP000826_4316(CP000826|pid:none) Serratia proteamaculans 568, co... 283 1e-74
AE005174_4001(AE005174|pid:none) Escherichia coli O157:H7 EDL933... 283 1e-74
CP000943_4354(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 282 1e-74
CR382135_718(CR382135|pid:none) Debaryomyces hansenii strain CBS... 282 1e-74
CR382135_788(CR382135|pid:none) Debaryomyces hansenii chromosome... 282 2e-74
EU895210_1(EU895210|pid:none) Escherichia coli strain 493/89 put... 282 2e-74
FM180568_3395(FM180568|pid:none) Escherichia coli 0127:H6 E2348/... 281 2e-74
CP001291_935(CP001291|pid:none) Cyanothece sp. PCC 7424, complet... 281 2e-74
CP000243_3476(CP000243|pid:none) Escherichia coli UTI89, complet... 281 2e-74
CP000613_3319(CP000613|pid:none) Rhodospirillum centenum SW, com... 281 3e-74
CP001365_630(CP001365|pid:none) Halorubrum lacusprofundi ATCC 49... 281 4e-74
CP000394_1884(CP000394|pid:none) Granulibacter bethesdensis CGDN... 281 4e-74
CP000633_2359(CP000633|pid:none) Agrobacterium vitis S4 chromoso... 280 7e-74
CP000377_2582(CP000377|pid:none) Silicibacter sp. TM1040, comple... 280 9e-74
AM920689_641(AM920689|pid:none) Xanthomonas campestris pv. campe... 279 1e-73
CP000050_584(CP000050|pid:none) Xanthomonas campestris pv. campe... 279 2e-73
CP000117_1656(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 278 2e-73
CP000038_3041(CP000038|pid:none) Shigella sonnei Ss046, complete... 278 2e-73
CU468135_2913(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 278 3e-73
CP000036_2750(CP000036|pid:none) Shigella boydii Sb227, complete... 276 1e-72
CP000514_841(CP000514|pid:none) Marinobacter aquaeolei VT8, comp... 275 2e-72
FM992695_185(FM992695|pid:none) Candida dubliniensis CD36 chromo... 275 3e-72
AM270347_42(AM270347|pid:none) Aspergillus niger contig An15c020... 275 3e-72
CP000749_3455(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 274 4e-72
CP001298_2396(CP001298|pid:none) Methylobacterium chloromethanic... 273 9e-72
CP000083_1724(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 272 1e-71
CP000806_4502(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 272 1e-71
CR382128_813(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 271 3e-71
CP000908_2215(CP000908|pid:none) Methylobacterium extorquens PA1... 271 4e-71
CP000115_2660(CP000115|pid:none) Nitrobacter winogradskyi Nb-255... 270 6e-71
CP000450_1139(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 270 6e-71
CP000376_208(CP000376|pid:none) Silicibacter sp. TM1040 mega pla... 269 1e-70
CP001344_2345(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 269 2e-70
CP000264_368(CP000264|pid:none) Jannaschia sp. CCS1, complete ge... 269 2e-70
CP001016_1193(CP001016|pid:none) Beijerinckia indica subsp. indi... 268 2e-70
FN392320_330(FN392320|pid:none) Pichia pastoris GS115 chromosome... 268 2e-70
AY917145_1(AY917145|pid:none) Thlaspi caerulescens glutathione t... 267 5e-70
CP000851_1171(CP000851|pid:none) Shewanella pealeana ATCC 700345... 266 8e-70
CP001037_2463(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 266 8e-70
AJ000977_10(AJ000977|pid:none) Rhodobacter sphaeroides DNA for s... 266 8e-70
AM920436_243(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 266 8e-70
CP000661_268(CP000661|pid:none) Rhodobacter sphaeroides ATCC 170... 265 2e-69
CP001032_1064(CP001032|pid:none) Opitutus terrae PB90-1, complet... 265 3e-69
BX908809_48(BX908809|pid:none) Neurospora crassa DNA linkage gro... 263 9e-69
AE004437_1751(AE004437|pid:none) Halobacterium sp. NRC-1, comple... 262 2e-68
CP000586_62(CP000586|pid:none) Ostreococcus lucimarinus CCE9901 ... 261 3e-68
CP000393_2304(CP000393|pid:none) Trichodesmium erythraeum IMS101... 261 3e-68
CP000828_5756(CP000828|pid:none) Acaryochloris marina MBIC11017,... 261 4e-68
CP000951_2372(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 260 8e-68
AM236080_16(AM236080|pid:none) Rhizobium leguminosarum bv. vicia... 259 2e-67
CP000631_176(CP000631|pid:none) Agrobacterium radiobacter K84 pl... 258 3e-67
BX950851_3166(BX950851|pid:none) Erwinia carotovora subsp. atros... 258 4e-67
CP000362_1239(CP000362|pid:none) Roseobacter denitrificans OCh 1... 257 6e-67
(O94524) RecName: Full=Glutathione S-transferase omega-like 2; ... 256 8e-67
AM420293_1568(AM420293|pid:none) Saccharopolyspora erythraea NRR... 253 9e-66
CP000606_2269(CP000606|pid:none) Shewanella loihica PV-4, comple... 252 2e-65
AL024486_24(AL024486|pid:none) Arabidopsis thaliana DNA chromoso... 251 5e-65
CP000489_1712(CP000489|pid:none) Paracoccus denitrificans PD1222... 249 1e-64
AE017351_229(AE017351|pid:none) Cryptococcus neoformans var. neo... 246 9e-64
CP001389_819(CP001389|pid:none) Rhizobium sp. NGR234, complete g... 237 5e-61
CP000088_2988(CP000088|pid:none) Thermobifida fusca YX, complete... 236 2e-60
BX248357_36(BX248357|pid:none) Corynebacterium diphtheriae gravi... 230 8e-59
AK176687_1(AK176687|pid:none) Arabidopsis thaliana mRNA, complet... 229 1e-58
AP009493_1338(AP009493|pid:none) Streptomyces griseus subsp. gri... 229 1e-58
CR382126_523(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 226 9e-58
AF072709_7(AF072709|pid:none) Streptomyces lividans amplifiable ... 224 5e-57
CP000850_460(CP000850|pid:none) Salinispora arenicola CNS-205, c... 224 5e-57
CP000750_364(CP000750|pid:none) Kineococcus radiotolerans SRS302... 223 1e-56
CP000578_839(CP000578|pid:none) Rhodobacter sphaeroides ATCC 170... 223 1e-56
CP000656_1694(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 223 1e-56
CP001366_208(CP001366|pid:none) Halorubrum lacusprofundi ATCC 49... 221 5e-56
AP008957_4116(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 220 9e-56
BA000030_7470(BA000030|pid:none) Streptomyces avermitilis MA-468... 220 9e-56
AM238664_828(AM238664|pid:none) Streptomyces ambofaciens ATCC 23... 219 1e-55
AM920436_676(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 219 2e-55
CP000144_147(CP000144|pid:none) Rhodobacter sphaeroides 2.4.1 ch... 218 3e-55
AP009044_1361(AP009044|pid:none) Corynebacterium glutamicum R DN... 217 7e-55
AM711867_2145(AM711867|pid:none) Clavibacter michiganensis subsp... 216 1e-54
CP000431_5961(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 216 1e-54
CU928170_734(CU928170|pid:none) Kluyveromyces thermotolerans str... 215 2e-54
CP000454_2128(CP000454|pid:none) Arthrobacter sp. FB24, complete... 215 2e-54
CP001142_259(CP001142|pid:none) Phaeodactylum tricornutum CCAP 1... 215 3e-54
AP011115_6079(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 214 4e-54
AX065613_1(AX065613|pid:none) Sequence 739 from Patent WO0100844... 213 8e-54
AP006618_4708(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 211 3e-53
CP000479_958(CP000479|pid:none) Mycobacterium avium 104, complet... 211 3e-53
CU458896_4546(CU458896|pid:none) Mycobacterium abscessus chromos... 211 4e-53
AP009152_356(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, c... 211 4e-53
CP001341_1868(CP001341|pid:none) Arthrobacter chlorophenolicus A... 210 7e-53
AP007171_783(AP007171|pid:none) Aspergillus oryzae RIB40 genomic... 210 9e-53
CP000474_59(CP000474|pid:none) Arthrobacter aurescens TC1, compl... 209 1e-52
AM270059_14(AM270059|pid:none) Aspergillus niger contig An03c018... 207 6e-52
CP001601_351(CP001601|pid:none) Corynebacterium aurimucosum ATCC... 207 6e-52
CP000384_4456(CP000384|pid:none) Mycobacterium sp. MCS, complete... 207 6e-52
AM270101_35(AM270101|pid:none) Aspergillus niger contig An05c001... 207 8e-52
CP000480_5505(CP000480|pid:none) Mycobacterium smegmatis str. MC... 206 1e-51
AM942444_747(AM942444|pid:none) Corynebacterium urealyticum DSM ... 205 2e-51
CP000854_4591(CP000854|pid:none) Mycobacterium marinum M, comple... 202 2e-50
CP000509_4459(CP000509|pid:none) Nocardioides sp. JS614, complet... 201 4e-50
CP000325_232(CP000325|pid:none) Mycobacterium ulcerans Agy99, co... 197 5e-49
AK109850_1(AK109850|pid:none) Oryza sativa Japonica Group cDNA c... 197 8e-49
BT039391_1(BT039391|pid:none) Zea mays full-length cDNA clone ZM... 194 7e-48
(Q04806) RecName: Full=Glutathione S-transferase omega-like 3; ... 192 2e-47
CP001575_367(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 192 3e-47
CP000489_1437(CP000489|pid:none) Paracoccus denitrificans PD1222... 187 5e-46
AM420293_2796(AM420293|pid:none) Saccharopolyspora erythraea NRR... 185 3e-45
CR382128_94(CR382128|pid:none) Yarrowia lipolytica strain CLIB12... 177 7e-43
AB177985_8(AB177985|pid:none) Sphingobium japonicum genes for pu... 158 4e-37
CP000095_280(CP000095|pid:none) Prochlorococcus marinus str. NAT... 155 3e-36
CP000110_508(CP000110|pid:none) Synechococcus sp. CC9605, comple... 155 3e-36
CP000878_244(CP000878|pid:none) Prochlorococcus marinus str. MIT... 154 5e-36
AM909629_1(AM909629|pid:none) Boea hygrometrica partial mRNA for... 147 9e-34
AE017126_250(AE017126|pid:none) Prochlorococcus marinus subsp. m... 145 2e-33
CT573213_4041(CT573213|pid:none) Frankia alni str. ACN14A chromo... 140 1e-31
CP000083_3387(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 138 4e-31
CP000111_232(CP000111|pid:none) Prochlorococcus marinus str. MIT... 135 2e-30
CP000552_252(CP000552|pid:none) Prochlorococcus marinus str. MIT... 133 1e-29
CP000576_243(CP000576|pid:none) Prochlorococcus marinus str. MIT... 131 4e-29
AE009948_1283(AE009948|pid:none) Streptococcus agalactiae 2603V/... 131 4e-29
CP000554_397(CP000554|pid:none) Prochlorococcus marinus str. MIT... 131 5e-29
BX569694_107(BX569694|pid:none) Synechococcus sp. WH8102 complet... 130 7e-29
CP000114_1235(CP000114|pid:none) Streptococcus agalactiae A909, ... 130 7e-29
CT978603_1497(CT978603|pid:none) Synechococcus sp. RCC307 genomi... 129 2e-28
CT971583_2089(CT971583|pid:none) Synechococcus WH7803 complete g... 118 4e-25
AP008208_1102(AP008208|pid:none) Oryza sativa (japonica cultivar... 100 1e-19
BT062115_1(BT062115|pid:none) Zea mays full-length cDNA clone ZM... 93 2e-17
BA000030_1070(BA000030|pid:none) Streptomyces avermitilis MA-468... 86 2e-15
AX135598_1(AX135598|pid:none) Sequence 11 from Patent WO0132697. 51 9e-05
AL162973_9(AL162973|pid:none) Arabidopsis thaliana DNA chromosom... 46 0.003
AC084405_25(AC084405|pid:none) Oryza sativa chromosome 3 BAC OSJ... 44 0.015
CP001616_788(CP001616|pid:none) Tolumonas auensis DSM 9187, comp... 42 0.056
CP001348_103(CP001348|pid:none) Clostridium cellulolyticum H10, ... 40 0.16
DQ355376_1(DQ355376|pid:none) Bombyx mori glutathione S-transfer... 39 0.36
EF107106_11(EF107106|pid:none) Uncultured marine bacterium HF130... 38 0.62
CP000789_1690(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 38 0.81
AF378889_1(AF378889|pid:none) Arabidopsis thaliana AT5g66420/K1F... 37 1.1
AK062937_1(AK062937|pid:none) Oryza sativa Japonica Group cDNA c... 37 1.4
AP002914_9(AP002914|pid:none) Oryza sativa Japonica Group genomi... 36 2.4
BC129660_1(BC129660|pid:none) Xenopus laevis hypothetical protei... 36 3.1
L16622_3(L16622|pid:none) Caenorhabditis elegans cosmid C02D5, c... 36 3.1
(P34277) RecName: Full=Probable glutathione transferase omega-2;... 36 3.1
EF107101_3(EF107101|pid:none) Uncultured marine bacterium HF10_0... 35 4.0
AJ132355_1(AJ132355|pid:none) Polymyxa betae mRNA for glutathion... 35 4.0
BT078591_1(BT078591|pid:none) Lepeophtheirus salmonis clone lsal... 35 5.2
AL844502_170(AL844502|pid:none) Plasmodium falciparum 3D7 chromo... 35 6.8
AB024945_7(AB024945|pid:none) Alcaligenes faecalis phenanthrene ... 35 6.8
FM992695_565(FM992695|pid:none) Candida dubliniensis CD36 chromo... 35 6.8
CP001287_1340(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 35 6.8
EF576125_1(EF576125|pid:none) Oryza sativa (indica cultivar-grou... 35 6.8
AY770043_1(AY770043|pid:none) Aspergillus fumigatus glutathione ... 35 6.8
AJ419773_1(AJ419773|pid:none) Avena sterilis subsp. ludoviciana ... 34 8.9
BC100218_1(BC100218|pid:none) Xenopus laevis cDNA clone MGC:1149... 34 8.9
J02592_1(J02592|pid:none) Rat glutathione S-transferase Y-b subu... 34 8.9
K01931_1(K01931|pid:none) Rat liver glutathione S-transferase Ya... 34 8.9

>AC147481_6(AC147481|pid:none) Medicago truncatula chromosome 2 clone
mth2-138b18, complete sequence.
&BT052017_1(BT052017|pid:none)
Length = 325

Score = 342 bits (877), Expect = 2e-92
Identities = 169/315 (53%), Positives = 220/315 (69%), Gaps = 11/315 (3%)
Frame = +1

Query: 130 DELDKKGSFIRVQSSFRNFISSNPDAEFKPEANRYHIYISLACPWASSVYLTLEMKGLQD 309
DE+ G+F R S+FR F+S +P+++F PE+ RYH+YIS ACPWA L++KGL
Sbjct: 7 DEISDSGAFTRSASTFRQFVSKDPNSQFPPESGRYHLYISYACPWACRCLAYLKIKGLDK 66

Query: 310 VIGVSIVDYLL-------QEGGWHFSERE----GSTVDKINGFNFLRQVYELSDKNFNGR 456
I S V + + GW F E G+ D +NG +R++YE++ N++G+
Sbjct: 67 AISFSSVKPIWGRTKESDEYMGWIFPESNTEVLGAEPDPLNGAKSVRELYEIASTNYSGK 126

Query: 457 VTVPVLFDTKTKKIVNNESPEIIRMLNSEFNQFAKHPEIDLNPTELQTQIQEIYDFIYPN 636
TVP+L+D K K IVNNES EIIRM N+EFN A++P +DL P+ELQ QI E ++IYPN
Sbjct: 127 FTVPILWDKKLKTIVNNESSEIIRMFNTEFNDIAENPILDLYPSELQAQIDETNEWIYPN 186

Query: 637 INNGVYRCGFAISQEAYSDAFEKLFNALDKAEDILSKQRYLVGSKFTYVDIRLFVTLIRF 816
INNGVYRCGFA QE Y DA +L+ ALDK EDILSKQRY+ G+K T DIRLFVTLIRF
Sbjct: 187 INNGVYRCGFAKKQEPYIDAARQLYEALDKCEDILSKQRYICGNKLTEADIRLFVTLIRF 246

Query: 817 DCVYVGHFKCNKKQIKEYPNLSNFVREIYQMEGTKKTVDFFHIKHHYYESHRTINPYGIV 996
D VY HFKCNKK I+EYPN+ N+ ++I+Q+ G TV+ HIK HYY SH +INP+GIV
Sbjct: 247 DEVYAVHFKCNKKLIREYPNIFNYTKDIFQIPGISSTVNMEHIKLHYYGSHPSINPFGIV 306

Query: 997 PVGPNMDWVNEPHNR 1041
P+GPN+D+ PH+R
Sbjct: 307 PMGPNIDYF-APHDR 320

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,714,137,912
Number of extensions: 32738082
Number of successful extensions: 85523
Number of sequences better than 10.0: 230
Number of HSP's gapped: 85075
Number of HSP's successfully gapped: 233
Length of query: 399
Length of database: 1,040,966,779
Length adjustment: 131
Effective length of query: 268
Effective length of database: 621,205,444
Effective search space: 166483058992
Effective search space used: 166483058992
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.66 gvh: 0.34 alm: 0.39 top: 0.53 tms: 0.00 mit: 0.33 mip: 0.05
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

36.0 %: cytoplasmic
28.0 %: nuclear
20.0 %: mitochondrial
8.0 %: cytoskeletal
4.0 %: vesicles of secretory system
4.0 %: peroxisomal

>> prediction for Contig-U10133-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 8
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 2
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0