Contig-U10133-1 |
Contig ID |
Contig-U10133-1 |
Contig update |
2002. 9.13 |
Contig sequence |
|
Gap |
no gap |
Contig length |
1197 |
Chromosome number (1..6, M) |
4 |
Chromosome length |
5430582 |
Start point |
4286745 |
End point |
4287897 |
Strand (PLUS/MINUS) |
PLUS |
Number of clones |
11 |
Number of EST |
16 |
Link to clone list |
U10133 |
List of clone(s) |
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.10 |
Homology vs CSM-cDNA |
|
dna update |
2008.11.18 |
Homology vs DNA |
Query= Contig-U10133-1 (Contig-U10133-1Q) /CSM_Contig/Contig-U10133-1Q.Seq.d (1197 letters)
Database: ddbj_A 92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(BJ436032) Dictyostelium discoideum cDNA clone:ddv29g16, 3' ... 1225 0.0 3 (BJ431978) Dictyostelium discoideum cDNA clone:ddv17p06, 3' ... 1215 0.0 2 (BJ433035) Dictyostelium discoideum cDNA clone:ddv20g15, 3' ... 1213 0.0 3 (BJ429481) Dictyostelium discoideum cDNA clone:ddv3k18, 3' e... 1132 0.0 4 (BJ434104) Dictyostelium discoideum cDNA clone:ddv23l19, 3' ... 1120 0.0 2 (BJ415555) Dictyostelium discoideum cDNA clone:ddv22o22, 5' ... 1120 0.0 2 (BJ433793) Dictyostelium discoideum cDNA clone:ddv22o22, 3' ... 1118 0.0 2 (BJ413865) Dictyostelium discoideum cDNA clone:ddv17p06, 5' ... 1116 0.0 2 (BJ412472) Dictyostelium discoideum cDNA clone:ddv8j14, 5' e... 1086 0.0 2 (BJ427957) Dictyostelium discoideum cDNA clone:ddv10p01, 3' ... 973 0.0 2 (BJ398575) Dictyostelium discoideum cDNA clone:dds1d01, 3' e... 946 0.0 2 (BJ430756) Dictyostelium discoideum cDNA clone:ddv8j14, 3' e... 567 0.0 3 (BJ411259) Dictyostelium discoideum cDNA clone:ddv3k18, 5' e... 950 0.0 2 (BJ409839) Dictyostelium discoideum cDNA clone:ddv10p01, 5' ... 908 0.0 2 (BJ387243) Dictyostelium discoideum cDNA clone:dds1d01, 5' e... 852 0.0 2 (BJ402446) Dictyostelium discoideum cDNA clone:dds16p19, 3' ... 700 0.0 2 (AU037624) Dictyostelium discoideum slug cDNA, clone SSD866. 749 0.0 3 (BJ388971) Dictyostelium discoideum cDNA clone:dds16p19, 5' ... 412 0.0 2 (BJ414839) Dictyostelium discoideum cDNA clone:ddv20g15, 5' ... 640 e-179 1 (BJ415834) Dictyostelium discoideum cDNA clone:ddv23l19, 5' ... 184 2e-51 2 (CU469464) Candidatus Phytoplasma mali strain AT complete ch... 36 9e-07 16 (AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 40 2e-05 14 (DQ774123) Synthetic construct Vibrio cholerae clone FLH2007... 56 9e-05 2 (AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 46 2e-04 16 (AL121759) Human DNA sequence from clone RP5-872K7 on chromo... 48 2e-04 2 (BA000016) Clostridium perfringens str. 13 DNA, complete gen... 36 8e-04 18 (CP000963) Clostridium botulinum A3 str. Loch Maree plasmid ... 34 9e-04 15 (AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 32 0.002 15 (CP000627) Vibrio cholerae O395 chromosome 2, complete genome. 56 0.003 1 (AE003852) Vibrio cholerae O1 biovar eltor str. N16961 chrom... 56 0.003 1 (CS468856) Sequence 47 from Patent EP1748080. 36 0.006 7 (CS419333) Sequence 47 from Patent WO2006094836. 36 0.006 7 (AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6... 36 0.007 3 (AC182158) Bos taurus clone CH240-513H6, WORKING DRAFT SEQUE... 38 0.008 2 (EC725683) MJE00005707 Malawimonas jakobiformis Home made (1... 40 0.009 3 (AC168005) Bos taurus clone CH240-208I21, WORKING DRAFT SEQU... 38 0.009 2 (CP000246) Clostridium perfringens ATCC 13124, complete genome. 38 0.010 17 (EJ519333) 1092955124362 Global-Ocean-Sampling_GS-29-01-01-1... 44 0.016 2 (AC115684) Dictyostelium discoideum chromosome 2 map 3108975... 34 0.028 9 (ER464918) 1092963916440 Global-Ocean-Sampling_GS-35-01-01-1... 36 0.029 3 (CP001056) Clostridium botulinum B str. Eklund 17B, complete... 48 0.033 19 (EF116866) Apis mellifera African(A) evolutionary lineage 16... 36 0.040 2 (EF116867) Apis mellifera European (M) lineage 16S ribosomal... 36 0.040 2 (CU074419) Zebrafish DNA sequence from clone CH73-234B20 in ... 52 0.050 1 (BX936392) Zebrafish DNA sequence from clone CH211-197O16 in... 52 0.050 1 (AL935311) Zebrafish DNA sequence from clone CH211-241N16. 52 0.050 1 (CU633396) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 52 0.050 1 (AC203004) Zea mays chromosome 1 clone CH201-155D2; ZMMBBc01... 52 0.050 1 (AC186167) Zea mays chromosome 1 clone CH201-112E13; ZMMBBc0... 52 0.050 1 (BJ998882) Lentinula edodes cDNA, clone:LeEST0786. 52 0.050 1 (BJ998800) Lentinula edodes cDNA, clone:LeEST0704. 52 0.050 1 (EK293727) 1095462339446 Global-Ocean-Sampling_GS-31-01-01-1... 44 0.057 2 (AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 38 0.067 12 (AE014852) Plasmodium falciparum 3D7 chromosome 12, section ... 40 0.067 10 (AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 36 0.070 11 (AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 34 0.073 14 (CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 34 0.073 15 (CR382400) Plasmodium falciparum chromosome 6, complete sequ... 36 0.10 12 (AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 32 0.11 13 (CT501373) A BAC library has been constructed from cultivar ... 34 0.11 3 (AP006628) Onion yellows phytoplasma OY-M DNA, complete genome. 38 0.11 16 (AY916130) Epidermophyton floccosum mitochondrion, complete ... 34 0.12 7 (AP006442) Homo sapiens genomic DNA, chromosome 11 clone:CMB... 38 0.12 2 (BX000706) Zebrafish DNA sequence from clone CH211-204D18 in... 36 0.12 2 (AC006279) Plasmodium falciparum chromosome 12 clone 3D7, **... 40 0.13 10 (EU237489) Vaceletia sp. GW948 mitochondrion, complete genome. 40 0.13 2 (CU280887) Zebrafish DNA sequence from clone DKEY-76B14 in l... 38 0.13 7 (FG167920) AGN_RNC006xa20f1.ab1 AGN_RNC Nicotiana tabacum cD... 38 0.13 3 (FG173385) AGN_RNC126xp15f1.ab1 AGN_RNC Nicotiana tabacum cD... 38 0.13 3 (AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 36 0.14 11 (CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 36 0.15 20 (DW003206) KR3B.105C05F.051109T7 KR3B Nicotiana tabacum cDNA... 38 0.15 3 (CK234063) re23e03.y1 Meloidogyne incognita parasitic J2 J3 ... 40 0.15 2 (BW528101) Ciona savignyi cDNA, clone:cslv004m05, 5'end, sin... 48 0.15 2 (CK984487) re38a11.y1 Meloidogyne incognita J3 J4 SL1 pGEM M... 40 0.15 2 (FG158523) AGN_RNC023xk23f1.ab1 AGN_RNC Nicotiana tabacum cD... 38 0.15 3 (CK984469) re37h01.y1 Meloidogyne incognita J3 J4 SL1 pGEM M... 40 0.15 2 (CN443259) re64d09.y1 Meloidogyne incognita J3 J4 SL1 pGEM M... 40 0.15 2 (CN577983) re48h06.y1 Meloidogyne incognita female SMART pGE... 40 0.15 2 (CF803132) rd94d10.y1 Meloidogyne incognita female SL1 pGEM ... 40 0.15 2 (CK984634) re44b07.y2 Meloidogyne incognita J3 J4 SL1 pGEM M... 40 0.15 2 (CN443131) re58d10.y1 Meloidogyne incognita J3 J4 SL1 pGEM M... 40 0.15 2 (CD749366) rd53b06.y1 Meloidogyne incognita parasitic adult ... 40 0.15 2 (CF802989) rd92d04.y1 Meloidogyne incognita female SL1 pGEM ... 40 0.15 2 (CN443429) re67b04.y1 Meloidogyne incognita J3 J4 SL1 pGEM M... 40 0.15 2 (CN443102) re58b03.y1 Meloidogyne incognita J3 J4 SL1 pGEM M... 40 0.15 2 (CN443041) re57d05.y1 Meloidogyne incognita J3 J4 SL1 pGEM M... 40 0.15 2 (CK984916) re47e07.y2 Meloidogyne incognita J3 J4 SL1 pGEM M... 40 0.15 2 (CK984809) re46b11.y2 Meloidogyne incognita J3 J4 SL1 pGEM M... 40 0.15 2 (CK984795) re46a09.y2 Meloidogyne incognita J3 J4 SL1 pGEM M... 40 0.15 2 (CF980461) re05c03.y1 Meloidogyne incognita female SL1 pGEM ... 40 0.15 2 (CF981035) re02a05.y1 Meloidogyne incognita female SL1 pGEM ... 40 0.15 2 (CF803146) rd94f04.y1 Meloidogyne incognita female SL1 pGEM ... 40 0.15 2 (CF802982) rd92c07.y1 Meloidogyne incognita female SL1 pGEM ... 40 0.15 2 (CF802945) rd91f11.y1 Meloidogyne incognita female SL1 pGEM ... 40 0.15 2 (CF803211) rd95e10.y1 Meloidogyne incognita female SL1 pGEM ... 40 0.15 2 (CF981055) re02c08.y1 Meloidogyne incognita female SL1 pGEM ... 40 0.15 2 (CF803217) rd95f05.y1 Meloidogyne incognita female SL1 pGEM ... 40 0.15 2 (CK983923) re31a04.y1 Meloidogyne incognita female SMART pGE... 40 0.15 2 (CF981010) re01g01.y1 Meloidogyne incognita female SL1 pGEM ... 40 0.15 2
>(BJ436032) Dictyostelium discoideum cDNA clone:ddv29g16, 3' end, single read. Length = 723
Score = 1225 bits (618), Expect(3) = 0.0 Identities = 618/618 (100%) Strand = Plus / Minus
Query: 455 gtgttaccgtacctgtactttttgataccaaaactaaaaagattgtcaacaatgaatcac 514 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 723 gtgttaccgtacctgtactttttgataccaaaactaaaaagattgtcaacaatgaatcac 664
Query: 515 cagaaatcattcgtatgctcaatagtgaattcaatcaattcgctaaacatccagaaattg 574 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 663 cagaaatcattcgtatgctcaatagtgaattcaatcaattcgctaaacatccagaaattg 604
Query: 575 atttaaacccaactgaattacaaactcaaattcaagaaatctatgatttcatctatccaa 634 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 603 atttaaacccaactgaattacaaactcaaattcaagaaatctatgatttcatctatccaa 544
Query: 635 atattaacaatggcgtttatcgttgtggttttgcaatctctcaagaagcttactctgatg 694 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 543 atattaacaatggcgtttatcgttgtggttttgcaatctctcaagaagcttactctgatg 484
Query: 695 cttttgaaaaattatttaatgctttagataaagctgaagatatcttatcaaaacaacgtt 754 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 483 cttttgaaaaattatttaatgctttagataaagctgaagatatcttatcaaaacaacgtt 424
Query: 755 atttagttggttcaaaatttacttatgttgatattagattatttgtcacattaattagat 814 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 423 atttagttggttcaaaatttacttatgttgatattagattatttgtcacattaattagat 364
Query: 815 ttgattgtgtctatgttggtcatttcaaatgtaataaaaaacaaatcaaagaatatccaa 874 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 ttgattgtgtctatgttggtcatttcaaatgtaataaaaaacaaatcaaagaatatccaa 304
Query: 875 atctttcaaactttgttcgtgaaatctatcaaatggaaggtactaaaaagactgtagact 934 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 303 atctttcaaactttgttcgtgaaatctatcaaatggaaggtactaaaaagactgtagact 244
Query: 935 ttttccatattaaacatcattattatgaatctcatagaaccatcaatccatacggtatcg 994 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 ttttccatattaaacatcattattatgaatctcatagaaccatcaatccatacggtatcg 184
Query: 995 ttccagttggtccaaatatggactgggttaatgaaccacacaaccgtgcaaacctttaaa 1054 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 ttccagttggtccaaatatggactgggttaatgaaccacacaaccgtgcaaacctttaaa 124
Query: 1055 aaattttcaaggataaat 1072 |||||||||||||||||| Sbjct: 123 aaattttcaaggataaat 106
Score = 123 bits (62), Expect(3) = 0.0 Identities = 62/62 (100%) Strand = Plus / Minus
Query: 1081 tatatgtatttaatgtttactattactactattatttgaacctttatcaaccaattatag 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97 tatatgtatttaatgtttactattactactattatttgaacctttatcaaccaattatag 38
Query: 1141 tt 1142 || Sbjct: 37 tt 36
Score = 42.1 bits (21), Expect(3) = 0.0 Identities = 21/21 (100%) Strand = Plus / Minus
Query: 1142 ttggaattgtaaagaatatta 1162 ||||||||||||||||||||| Sbjct: 37 ttggaattgtaaagaatatta 17
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 92845959 Number of Hits to DB: 1,684,097,104 Number of extensions: 111848385 Number of successful extensions: 10248447 Number of sequences better than 10.0: 519 Length of query: 1197 Length of database: 95,242,211,685 Length adjustment: 24 Effective length of query: 1173 Effective length of database: 97,308,875,965 Effective search space: 114143311506945 Effective search space used: 114143311506945 X1: 11 (21.8 bits) S2: 22 (44.1 bits)
|
protein update |
2009. 6.27 |
Homology vs Protein |
Query= Contig-U10133-1 (Contig-U10133-1Q) /CSM_Contig/Contig-U10133-1Q.Seq.d (1197 letters)
Database: nrp_A 3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
AC147481_6(AC147481|pid:none) Medicago truncatula chromosome 2 c... 342 2e-92 CP000758_1588(CP000758|pid:none) Ochrobactrum anthropi ATCC 4918... 325 2e-87 AF370272_1(AF370272|pid:none) Arabidopsis thaliana unknown prote... 323 7e-87 CP000806_3181(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 323 7e-87 EF078692_6(EF078692|pid:none) Azoarcus anaerobius transposase ge... 318 2e-85 BA000012_2159(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 314 3e-84 CP000393_3966(CP000393|pid:none) Trichodesmium erythraeum IMS101... 314 4e-84 AL766847_54(AL766847|pid:none) Streptococcus agalactiae NEM316 c... 314 4e-84 CP000094_3576(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 314 4e-84 AE003852_1077(AE003852|pid:none) Vibrio cholerae O1 biovar eltor... 312 1e-83 CP000949_3380(CP000949|pid:none) Pseudomonas putida W619, comple... 312 1e-83 EU960881_1(EU960881|pid:none) Zea mays clone 229366 glutathione ... 311 2e-83 CP000708_1386(CP000708|pid:none) Brucella ovis ATCC 25840 chromo... 309 1e-82 CP001287_3594(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 309 1e-82 CP000407_635(CP000407|pid:none) Streptococcus suis 05ZYH33, comp... 309 1e-82 AE016795_2857(AE016795|pid:none) Vibrio vulnificus CMCP6 chromos... 309 1e-82 CP000352_1653(CP000352|pid:none) Ralstonia metallidurans CH34, c... 309 1e-82 AE016853_3267(AE016853|pid:none) Pseudomonas syringae pv. tomato... 309 1e-82 CP000090_1443(CP000090|pid:none) Ralstonia eutropha JMP134 chrom... 308 2e-82 CT573326_2040(CT573326|pid:none) Pseudomonas entomophila str. L4... 308 3e-82 CP000911_1537(CP000911|pid:none) Brucella suis ATCC 23445 chromo... 308 3e-82 BA000037_1209(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, ch... 307 5e-82 CP001488_1493(CP001488|pid:none) Brucella melitensis ATCC 23457 ... 307 5e-82 CP000680_2363(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 306 7e-82 AM181176_3710(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 306 7e-82 CU234118_4227(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 306 7e-82 CP000076_3823(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 306 9e-82 AE008917_454(AE008917|pid:none) Brucella melitensis 16M chromoso... 306 1e-81 CP000926_3578(CP000926|pid:none) Pseudomonas putida GB-1, comple... 305 2e-81 CP000744_2566(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 304 4e-81 AE004091_2611(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 304 5e-81 CP000438_2429(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 303 8e-81 CP000270_1431(CP000270|pid:none) Burkholderia xenovorans LB400 c... 301 2e-80 FM954972_903(FM954972|pid:none) Vibrio splendidus LGP32 chromoso... 301 4e-80 CP000628_2436(CP000628|pid:none) Agrobacterium radiobacter K84 c... 300 9e-80 CP000075_3172(CP000075|pid:none) Pseudomonas syringae pv. syring... 299 1e-79 CP000712_1811(CP000712|pid:none) Pseudomonas putida F1, complete... 298 2e-79 AM236080_3506(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 298 3e-79 AE017340_827(AE017340|pid:none) Idiomarina loihiensis L2TR, comp... 297 6e-79 CP000494_4402(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 296 1e-78 CP001389_2295(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 296 1e-78 CP000133_3021(CP000133|pid:none) Rhizobium etli CFN 42, complete... 294 4e-78 CP001339_689(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, c... 293 8e-78 CP000901_1017(CP000901|pid:none) Yersinia pestis Angola, complet... 293 1e-77 CP000964_571(CP000964|pid:none) Klebsiella pneumoniae 342, compl... 291 3e-77 AM039952_637(AM039952|pid:none) Xanthomonas campestris pv. vesic... 290 5e-77 FM178379_1201(FM178379|pid:none) Aliivibrio salmonicida LFI1238 ... 290 5e-77 CU928158_4196(CU928158|pid:none) Escherichia fergusonii ATCC 354... 290 7e-77 AM180088_281(AM180088|pid:none) Haloquadratum walsbyi DSM 16790 ... 290 7e-77 CR954247_101(CR954247|pid:none) Pseudoalteromonas haloplanktis s... 290 9e-77 AP006725_4382(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 289 1e-76 CP001344_1776(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 289 2e-76 AM286415_3565(AM286415|pid:none) Yersinia enterocolitica subsp. ... 288 2e-76 CP001074_3176(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 288 3e-76 BA000022_3162(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 288 3e-76 CP000304_1948(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 288 3e-76 CP001001_816(CP001001|pid:none) Methylobacterium radiotolerans J... 288 3e-76 AP009384_3957(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 288 3e-76 AE009952_110(AE009952|pid:none) Yersinia pestis KIM, complete ge... 287 4e-76 CP001138_3185(CP001138|pid:none) Salmonella enterica subsp. ente... 285 2e-75 CP000802_3117(CP000802|pid:none) Escherichia coli HS, complete g... 285 2e-75 CP000034_3054(CP000034|pid:none) Shigella dysenteriae Sd197, com... 285 2e-75 A97631(A97631)hypothetical 37.4K protein in exuR-tdcC intergenic... 285 3e-75 AD2854(AD2854) conserved hypothetical protein Atu2261 [imported]... 285 3e-75 CP000886_3920(CP000886|pid:none) Salmonella enterica subsp. ente... 285 3e-75 CP000783_3429(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 285 3e-75 AL591688_2379(AL591688|pid:none) Sinorhizobium meliloti 1021 com... 285 3e-75 AM933172_3060(AM933172|pid:none) Salmonella enterica subsp. ente... 285 3e-75 AE006468_3142(AE006468|pid:none) Salmonella enterica subsp. ente... 284 4e-75 CP000497_112(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 284 4e-75 AE014613_2949(AE014613|pid:none) Salmonella enterica subsp. ente... 283 6e-75 CP001113_3272(CP001113|pid:none) Salmonella enterica subsp. ente... 283 6e-75 CP000285_1128(CP000285|pid:none) Chromohalobacter salexigens DSM... 283 8e-75 CU928163_3513(CU928163|pid:none) Escherichia coli UMN026 chromos... 283 8e-75 CP000800_3401(CP000800|pid:none) Escherichia coli E24377A, compl... 283 8e-75 (P42620) RecName: Full=Uncharacterized protein yqjG; &AP009048_... 283 8e-75 CP000826_4316(CP000826|pid:none) Serratia proteamaculans 568, co... 283 1e-74 AE005174_4001(AE005174|pid:none) Escherichia coli O157:H7 EDL933... 283 1e-74 CP000943_4354(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 282 1e-74 CR382135_718(CR382135|pid:none) Debaryomyces hansenii strain CBS... 282 1e-74 CR382135_788(CR382135|pid:none) Debaryomyces hansenii chromosome... 282 2e-74 EU895210_1(EU895210|pid:none) Escherichia coli strain 493/89 put... 282 2e-74 FM180568_3395(FM180568|pid:none) Escherichia coli 0127:H6 E2348/... 281 2e-74 CP001291_935(CP001291|pid:none) Cyanothece sp. PCC 7424, complet... 281 2e-74 CP000243_3476(CP000243|pid:none) Escherichia coli UTI89, complet... 281 2e-74 CP000613_3319(CP000613|pid:none) Rhodospirillum centenum SW, com... 281 3e-74 CP001365_630(CP001365|pid:none) Halorubrum lacusprofundi ATCC 49... 281 4e-74 CP000394_1884(CP000394|pid:none) Granulibacter bethesdensis CGDN... 281 4e-74 CP000633_2359(CP000633|pid:none) Agrobacterium vitis S4 chromoso... 280 7e-74 CP000377_2582(CP000377|pid:none) Silicibacter sp. TM1040, comple... 280 9e-74 AM920689_641(AM920689|pid:none) Xanthomonas campestris pv. campe... 279 1e-73 CP000050_584(CP000050|pid:none) Xanthomonas campestris pv. campe... 279 2e-73 CP000117_1656(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 278 2e-73 CP000038_3041(CP000038|pid:none) Shigella sonnei Ss046, complete... 278 2e-73 CU468135_2913(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 278 3e-73 CP000036_2750(CP000036|pid:none) Shigella boydii Sb227, complete... 276 1e-72 CP000514_841(CP000514|pid:none) Marinobacter aquaeolei VT8, comp... 275 2e-72 FM992695_185(FM992695|pid:none) Candida dubliniensis CD36 chromo... 275 3e-72 AM270347_42(AM270347|pid:none) Aspergillus niger contig An15c020... 275 3e-72 CP000749_3455(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 274 4e-72 CP001298_2396(CP001298|pid:none) Methylobacterium chloromethanic... 273 9e-72 CP000083_1724(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 272 1e-71 CP000806_4502(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 272 1e-71 CR382128_813(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 271 3e-71 CP000908_2215(CP000908|pid:none) Methylobacterium extorquens PA1... 271 4e-71 CP000115_2660(CP000115|pid:none) Nitrobacter winogradskyi Nb-255... 270 6e-71 CP000450_1139(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 270 6e-71 CP000376_208(CP000376|pid:none) Silicibacter sp. TM1040 mega pla... 269 1e-70 CP001344_2345(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 269 2e-70 CP000264_368(CP000264|pid:none) Jannaschia sp. CCS1, complete ge... 269 2e-70 CP001016_1193(CP001016|pid:none) Beijerinckia indica subsp. indi... 268 2e-70 FN392320_330(FN392320|pid:none) Pichia pastoris GS115 chromosome... 268 2e-70 AY917145_1(AY917145|pid:none) Thlaspi caerulescens glutathione t... 267 5e-70 CP000851_1171(CP000851|pid:none) Shewanella pealeana ATCC 700345... 266 8e-70 CP001037_2463(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 266 8e-70 AJ000977_10(AJ000977|pid:none) Rhodobacter sphaeroides DNA for s... 266 8e-70 AM920436_243(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 266 8e-70 CP000661_268(CP000661|pid:none) Rhodobacter sphaeroides ATCC 170... 265 2e-69 CP001032_1064(CP001032|pid:none) Opitutus terrae PB90-1, complet... 265 3e-69 BX908809_48(BX908809|pid:none) Neurospora crassa DNA linkage gro... 263 9e-69 AE004437_1751(AE004437|pid:none) Halobacterium sp. NRC-1, comple... 262 2e-68 CP000586_62(CP000586|pid:none) Ostreococcus lucimarinus CCE9901 ... 261 3e-68 CP000393_2304(CP000393|pid:none) Trichodesmium erythraeum IMS101... 261 3e-68 CP000828_5756(CP000828|pid:none) Acaryochloris marina MBIC11017,... 261 4e-68 CP000951_2372(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 260 8e-68 AM236080_16(AM236080|pid:none) Rhizobium leguminosarum bv. vicia... 259 2e-67 CP000631_176(CP000631|pid:none) Agrobacterium radiobacter K84 pl... 258 3e-67 BX950851_3166(BX950851|pid:none) Erwinia carotovora subsp. atros... 258 4e-67 CP000362_1239(CP000362|pid:none) Roseobacter denitrificans OCh 1... 257 6e-67 (O94524) RecName: Full=Glutathione S-transferase omega-like 2; ... 256 8e-67 AM420293_1568(AM420293|pid:none) Saccharopolyspora erythraea NRR... 253 9e-66 CP000606_2269(CP000606|pid:none) Shewanella loihica PV-4, comple... 252 2e-65 AL024486_24(AL024486|pid:none) Arabidopsis thaliana DNA chromoso... 251 5e-65 CP000489_1712(CP000489|pid:none) Paracoccus denitrificans PD1222... 249 1e-64 AE017351_229(AE017351|pid:none) Cryptococcus neoformans var. neo... 246 9e-64 CP001389_819(CP001389|pid:none) Rhizobium sp. NGR234, complete g... 237 5e-61 CP000088_2988(CP000088|pid:none) Thermobifida fusca YX, complete... 236 2e-60 BX248357_36(BX248357|pid:none) Corynebacterium diphtheriae gravi... 230 8e-59 AK176687_1(AK176687|pid:none) Arabidopsis thaliana mRNA, complet... 229 1e-58 AP009493_1338(AP009493|pid:none) Streptomyces griseus subsp. gri... 229 1e-58 CR382126_523(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 226 9e-58 AF072709_7(AF072709|pid:none) Streptomyces lividans amplifiable ... 224 5e-57 CP000850_460(CP000850|pid:none) Salinispora arenicola CNS-205, c... 224 5e-57 CP000750_364(CP000750|pid:none) Kineococcus radiotolerans SRS302... 223 1e-56 CP000578_839(CP000578|pid:none) Rhodobacter sphaeroides ATCC 170... 223 1e-56 CP000656_1694(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 223 1e-56 CP001366_208(CP001366|pid:none) Halorubrum lacusprofundi ATCC 49... 221 5e-56 AP008957_4116(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 220 9e-56 BA000030_7470(BA000030|pid:none) Streptomyces avermitilis MA-468... 220 9e-56 AM238664_828(AM238664|pid:none) Streptomyces ambofaciens ATCC 23... 219 1e-55 AM920436_676(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 219 2e-55 CP000144_147(CP000144|pid:none) Rhodobacter sphaeroides 2.4.1 ch... 218 3e-55 AP009044_1361(AP009044|pid:none) Corynebacterium glutamicum R DN... 217 7e-55 AM711867_2145(AM711867|pid:none) Clavibacter michiganensis subsp... 216 1e-54 CP000431_5961(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 216 1e-54 CU928170_734(CU928170|pid:none) Kluyveromyces thermotolerans str... 215 2e-54 CP000454_2128(CP000454|pid:none) Arthrobacter sp. FB24, complete... 215 2e-54 CP001142_259(CP001142|pid:none) Phaeodactylum tricornutum CCAP 1... 215 3e-54 AP011115_6079(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 214 4e-54 AX065613_1(AX065613|pid:none) Sequence 739 from Patent WO0100844... 213 8e-54 AP006618_4708(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 211 3e-53 CP000479_958(CP000479|pid:none) Mycobacterium avium 104, complet... 211 3e-53 CU458896_4546(CU458896|pid:none) Mycobacterium abscessus chromos... 211 4e-53 AP009152_356(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, c... 211 4e-53 CP001341_1868(CP001341|pid:none) Arthrobacter chlorophenolicus A... 210 7e-53 AP007171_783(AP007171|pid:none) Aspergillus oryzae RIB40 genomic... 210 9e-53 CP000474_59(CP000474|pid:none) Arthrobacter aurescens TC1, compl... 209 1e-52 AM270059_14(AM270059|pid:none) Aspergillus niger contig An03c018... 207 6e-52 CP001601_351(CP001601|pid:none) Corynebacterium aurimucosum ATCC... 207 6e-52 CP000384_4456(CP000384|pid:none) Mycobacterium sp. MCS, complete... 207 6e-52 AM270101_35(AM270101|pid:none) Aspergillus niger contig An05c001... 207 8e-52 CP000480_5505(CP000480|pid:none) Mycobacterium smegmatis str. MC... 206 1e-51 AM942444_747(AM942444|pid:none) Corynebacterium urealyticum DSM ... 205 2e-51 CP000854_4591(CP000854|pid:none) Mycobacterium marinum M, comple... 202 2e-50 CP000509_4459(CP000509|pid:none) Nocardioides sp. JS614, complet... 201 4e-50 CP000325_232(CP000325|pid:none) Mycobacterium ulcerans Agy99, co... 197 5e-49 AK109850_1(AK109850|pid:none) Oryza sativa Japonica Group cDNA c... 197 8e-49 BT039391_1(BT039391|pid:none) Zea mays full-length cDNA clone ZM... 194 7e-48 (Q04806) RecName: Full=Glutathione S-transferase omega-like 3; ... 192 2e-47 CP001575_367(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 192 3e-47 CP000489_1437(CP000489|pid:none) Paracoccus denitrificans PD1222... 187 5e-46 AM420293_2796(AM420293|pid:none) Saccharopolyspora erythraea NRR... 185 3e-45 CR382128_94(CR382128|pid:none) Yarrowia lipolytica strain CLIB12... 177 7e-43 AB177985_8(AB177985|pid:none) Sphingobium japonicum genes for pu... 158 4e-37 CP000095_280(CP000095|pid:none) Prochlorococcus marinus str. NAT... 155 3e-36 CP000110_508(CP000110|pid:none) Synechococcus sp. CC9605, comple... 155 3e-36 CP000878_244(CP000878|pid:none) Prochlorococcus marinus str. MIT... 154 5e-36 AM909629_1(AM909629|pid:none) Boea hygrometrica partial mRNA for... 147 9e-34 AE017126_250(AE017126|pid:none) Prochlorococcus marinus subsp. m... 145 2e-33 CT573213_4041(CT573213|pid:none) Frankia alni str. ACN14A chromo... 140 1e-31 CP000083_3387(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 138 4e-31 CP000111_232(CP000111|pid:none) Prochlorococcus marinus str. MIT... 135 2e-30 CP000552_252(CP000552|pid:none) Prochlorococcus marinus str. MIT... 133 1e-29 CP000576_243(CP000576|pid:none) Prochlorococcus marinus str. MIT... 131 4e-29 AE009948_1283(AE009948|pid:none) Streptococcus agalactiae 2603V/... 131 4e-29 CP000554_397(CP000554|pid:none) Prochlorococcus marinus str. MIT... 131 5e-29 BX569694_107(BX569694|pid:none) Synechococcus sp. WH8102 complet... 130 7e-29 CP000114_1235(CP000114|pid:none) Streptococcus agalactiae A909, ... 130 7e-29 CT978603_1497(CT978603|pid:none) Synechococcus sp. RCC307 genomi... 129 2e-28 CT971583_2089(CT971583|pid:none) Synechococcus WH7803 complete g... 118 4e-25 AP008208_1102(AP008208|pid:none) Oryza sativa (japonica cultivar... 100 1e-19 BT062115_1(BT062115|pid:none) Zea mays full-length cDNA clone ZM... 93 2e-17 BA000030_1070(BA000030|pid:none) Streptomyces avermitilis MA-468... 86 2e-15 AX135598_1(AX135598|pid:none) Sequence 11 from Patent WO0132697. 51 9e-05 AL162973_9(AL162973|pid:none) Arabidopsis thaliana DNA chromosom... 46 0.003 AC084405_25(AC084405|pid:none) Oryza sativa chromosome 3 BAC OSJ... 44 0.015 CP001616_788(CP001616|pid:none) Tolumonas auensis DSM 9187, comp... 42 0.056 CP001348_103(CP001348|pid:none) Clostridium cellulolyticum H10, ... 40 0.16 DQ355376_1(DQ355376|pid:none) Bombyx mori glutathione S-transfer... 39 0.36 EF107106_11(EF107106|pid:none) Uncultured marine bacterium HF130... 38 0.62 CP000789_1690(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 38 0.81 AF378889_1(AF378889|pid:none) Arabidopsis thaliana AT5g66420/K1F... 37 1.1 AK062937_1(AK062937|pid:none) Oryza sativa Japonica Group cDNA c... 37 1.4 AP002914_9(AP002914|pid:none) Oryza sativa Japonica Group genomi... 36 2.4 BC129660_1(BC129660|pid:none) Xenopus laevis hypothetical protei... 36 3.1 L16622_3(L16622|pid:none) Caenorhabditis elegans cosmid C02D5, c... 36 3.1 (P34277) RecName: Full=Probable glutathione transferase omega-2;... 36 3.1 EF107101_3(EF107101|pid:none) Uncultured marine bacterium HF10_0... 35 4.0 AJ132355_1(AJ132355|pid:none) Polymyxa betae mRNA for glutathion... 35 4.0 BT078591_1(BT078591|pid:none) Lepeophtheirus salmonis clone lsal... 35 5.2 AL844502_170(AL844502|pid:none) Plasmodium falciparum 3D7 chromo... 35 6.8 AB024945_7(AB024945|pid:none) Alcaligenes faecalis phenanthrene ... 35 6.8 FM992695_565(FM992695|pid:none) Candida dubliniensis CD36 chromo... 35 6.8 CP001287_1340(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 35 6.8 EF576125_1(EF576125|pid:none) Oryza sativa (indica cultivar-grou... 35 6.8 AY770043_1(AY770043|pid:none) Aspergillus fumigatus glutathione ... 35 6.8 AJ419773_1(AJ419773|pid:none) Avena sterilis subsp. ludoviciana ... 34 8.9 BC100218_1(BC100218|pid:none) Xenopus laevis cDNA clone MGC:1149... 34 8.9 J02592_1(J02592|pid:none) Rat glutathione S-transferase Y-b subu... 34 8.9 K01931_1(K01931|pid:none) Rat liver glutathione S-transferase Ya... 34 8.9
>AC147481_6(AC147481|pid:none) Medicago truncatula chromosome 2 clone mth2-138b18, complete sequence. &BT052017_1(BT052017|pid:none) Length = 325
Score = 342 bits (877), Expect = 2e-92 Identities = 169/315 (53%), Positives = 220/315 (69%), Gaps = 11/315 (3%) Frame = +1
Query: 130 DELDKKGSFIRVQSSFRNFISSNPDAEFKPEANRYHIYISLACPWASSVYLTLEMKGLQD 309 DE+ G+F R S+FR F+S +P+++F PE+ RYH+YIS ACPWA L++KGL Sbjct: 7 DEISDSGAFTRSASTFRQFVSKDPNSQFPPESGRYHLYISYACPWACRCLAYLKIKGLDK 66
Query: 310 VIGVSIVDYLL-------QEGGWHFSERE----GSTVDKINGFNFLRQVYELSDKNFNGR 456 I S V + + GW F E G+ D +NG +R++YE++ N++G+ Sbjct: 67 AISFSSVKPIWGRTKESDEYMGWIFPESNTEVLGAEPDPLNGAKSVRELYEIASTNYSGK 126
Query: 457 VTVPVLFDTKTKKIVNNESPEIIRMLNSEFNQFAKHPEIDLNPTELQTQIQEIYDFIYPN 636 TVP+L+D K K IVNNES EIIRM N+EFN A++P +DL P+ELQ QI E ++IYPN Sbjct: 127 FTVPILWDKKLKTIVNNESSEIIRMFNTEFNDIAENPILDLYPSELQAQIDETNEWIYPN 186
Query: 637 INNGVYRCGFAISQEAYSDAFEKLFNALDKAEDILSKQRYLVGSKFTYVDIRLFVTLIRF 816 INNGVYRCGFA QE Y DA +L+ ALDK EDILSKQRY+ G+K T DIRLFVTLIRF Sbjct: 187 INNGVYRCGFAKKQEPYIDAARQLYEALDKCEDILSKQRYICGNKLTEADIRLFVTLIRF 246
Query: 817 DCVYVGHFKCNKKQIKEYPNLSNFVREIYQMEGTKKTVDFFHIKHHYYESHRTINPYGIV 996 D VY HFKCNKK I+EYPN+ N+ ++I+Q+ G TV+ HIK HYY SH +INP+GIV Sbjct: 247 DEVYAVHFKCNKKLIREYPNIFNYTKDIFQIPGISSTVNMEHIKLHYYGSHPSINPFGIV 306
Query: 997 PVGPNMDWVNEPHNR 1041 P+GPN+D+ PH+R Sbjct: 307 PMGPNIDYF-APHDR 320
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3204285 Number of Hits to DB: 1,714,137,912 Number of extensions: 32738082 Number of successful extensions: 85523 Number of sequences better than 10.0: 230 Number of HSP's gapped: 85075 Number of HSP's successfully gapped: 233 Length of query: 399 Length of database: 1,040,966,779 Length adjustment: 131 Effective length of query: 268 Effective length of database: 621,205,444 Effective search space: 166483058992 Effective search space used: 166483058992 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 32 (16.9 bits)
|
PSORT |
|
VS (DIR, S) |
0 |
VH (FL, L) |
0 |
VF (FL, S) |
8 |
AH (FL, L) |
0 |
AF (FL, S) |
0 |
SL (DIR, L) |
0 |
SS (DIR, S) |
1 |
SH (FL, L) |
0 |
SF (FL, S) |
2 |
CH (FL, L) |
0 |
CF (FL, S) |
0 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
0 |
FC-IC (SUB) |
0 |