| Contig-U10129-1 |
| Contig ID |
Contig-U10129-1 |
| Contig update |
2002. 9.13 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
1026 |
| Chromosome number (1..6, M) |
4 |
| Chromosome length |
5430582 |
| Start point |
1859774 |
| End point |
1860799 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
4 |
| Number of EST |
4 |
| Link to clone list |
U10129 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.18 |
| Homology vs DNA |
Query= Contig-U10129-1 (Contig-U10129-1Q) /CSM_Contig/Contig-U10129-1Q.Seq.d
(1026 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU263630) Dictyostelium discoideum vegetative cDNA clone:VS... 1049 0.0 1
(AU263629) Dictyostelium discoideum vegetative cDNA clone:VS... 513 0.0 2
(AU272398) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 462 e-125 1
(AU267600) Dictyostelium discoideum vegetative cDNA clone:VS... 357 5e-94 1
(AU267599) Dictyostelium discoideum vegetative cDNA clone:VS... 357 5e-94 1
(U66367) Dictyostelium discoideum SapA (sapA) mRNA, partial ... 107 2e-50 4
(BJ417549) Dictyostelium discoideum cDNA clone:ddv30p22, 5' ... 107 6e-41 3
(BJ411563) Dictyostelium discoideum cDNA clone:ddv4m23, 5' e... 107 1e-38 3
(BJ436372) Dictyostelium discoideum cDNA clone:ddv30p22, 3' ... 84 2e-23 3
(BJ429662) Dictyostelium discoideum cDNA clone:ddv4p07, 3' e... 84 2e-14 2
(BJ432939) Dictyostelium discoideum cDNA clone:ddv20e10, 3' ... 80 3e-13 2
(BJ411525) Dictyostelium discoideum cDNA clone:ddv4c23, 5' e... 82 5e-11 1
(BJ431567) Dictyostelium discoideum cDNA clone:ddv14k16, 3' ... 66 4e-09 2
(BJ434365) Dictyostelium discoideum cDNA clone:ddv16m13, 3' ... 66 4e-09 2
(BJ430620) Dictyostelium discoideum cDNA clone:ddv8a06, 3' e... 56 3e-06 2
(BJ434831) Dictyostelium discoideum cDNA clone:ddv25i02, 3' ... 48 6e-04 2
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 38 0.002 10
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 36 0.005 10
(AC186346) Gallus gallus BAC clone CH261-175M10 from chromos... 40 0.007 2
(BD439871) Nucleotide Sequence of the Mycoplasma Genitalium ... 36 0.013 13
(AR300198) Sequence 1 from patent US 6537773. 36 0.013 13
(L43967) Mycoplasma genitalium G37, complete genome. 36 0.013 13
(CP000925) Synthetic Mycoplasma genitalium JCVI-1.0, complet... 36 0.013 13
(AC117082) Dictyostelium discoideum chromosome 2 map complem... 36 0.032 6
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 38 0.033 11
(AC181223) Strongylocentrotus purpuratus clone R3-4009M09, W... 42 0.040 3
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 36 0.046 9
(AC117080) Dictyostelium discoideum chromosome 2 map complem... 38 0.060 4
(FC810736) Sr_pASP6_05f19_SP6 S. ratti mixed stage pAMP Stro... 34 0.068 3
(AC142558) Carollia perspicillata clone 36K12, complete sequ... 50 0.071 4
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 38 0.081 8
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 36 0.12 12
(AC005688) Homo sapiens clone UWGC:g1564a134 from 7p14-15, c... 36 0.14 4
(AC095019) Takifugu rubripes clone 249J24, complete sequence. 50 0.17 1
(AC093916) Homo sapiens BAC clone RP11-789C2 from 4, complet... 50 0.17 1
(AC090675) Homo sapiens 12 BAC RP11-681A17 (Roswell Park Can... 50 0.17 1
(AC145201) Takifugu rubripes clone 277C18, WORKING DRAFT SEQ... 50 0.17 1
(AC145181) Takifugu rubripes clone 195D7, WORKING DRAFT SEQU... 50 0.17 1
(AC026134) Homo sapiens chromosome 12 clone RP11-681A17 map ... 50 0.17 1
(EK377959) 1095469448137 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.17 1
(BF393518) UI-R-CA0-bfu-h-05-0-UI.s1 UI-R-CA0 Rattus norvegi... 50 0.17 1
(CR391927) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 0.18 10
(AC189340) Brassica rapa subsp. pekinensis clone KBrB041J18,... 38 0.19 5
(AC152057) Medicago truncatula chromosome 8 clone mth2-25a12... 34 0.19 8
(AC171141) Helobdella robusta clone CH306-1B3, complete sequ... 40 0.28 6
(EF568108) Glossina pallidipes salivary gland hypertrophy vi... 34 0.29 7
(AE000783) Borrelia burgdorferi B31, complete genome. 40 0.35 14
(AC204265) Zea mays chromosome 1 clone ZMMBBb-289N7; ZMMBBb0... 48 0.36 2
(CR954257) Anopheles gambiae Pen-1 region; BAC clone 32F02 f... 44 0.38 3
(AC113205) Mus musculus chromosome 13 clone RP23-319G18 map ... 44 0.40 4
(AC178805) Strongylocentrotus purpuratus clone R3-22G01, WOR... 42 0.43 5
(AL049184) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 42 0.43 9
(AC091359) Rattus norvegicus clone CH230-1A14, *** SEQUENCIN... 44 0.46 5
(BJ434464) Dictyostelium discoideum cDNA clone:ddv16o19, 3' ... 38 0.49 2
(BJ371891) Dictyostelium discoideum cDNA clone:ddc10o01, 3' ... 38 0.52 2
(BJ403267) Dictyostelium discoideum cDNA clone:dds24g17, 3' ... 38 0.57 2
(AC120939) Rattus norvegicus clone CH230-520D9, WORKING DRAF... 42 0.58 2
(BJ442094) Dictyostelium discoideum cDNA clone:ddv48g20, 3' ... 38 0.59 2
(AC125310) Mus musculus BAC clone RP24-548E5 from chromosome... 48 0.66 1
(AC206132) Saccoglossus kowalevskii BAC CUGI_SK_BA 001B23 (... 48 0.66 1
(AC206109) Saccoglossus kowalevskii BAC CUGI_SK_BA 001A24 (... 48 0.66 1
(AC023790) Homo sapiens 12 BAC RP11-377D9 (Roswell Park Canc... 48 0.66 1
(AC107867) Mus musculus clone RP23-402L15, WORKING DRAFT SEQ... 48 0.66 1
(CU074329) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.66 1
(AC206133) Saccoglossus kowalevskii clone CUGI_SK_BA 001B24,... 48 0.66 1
(AC191623) Zea mays chromosome 1 clone CH201-380M20; ZMMBBc0... 48 0.66 1
(AC177832) Zea mays chromosome 1 clone CH201-42E18; ZMMBBc00... 48 0.66 1
(AC174907) Bos taurus clone CH240-175B2, WORKING DRAFT SEQUE... 48 0.66 1
(AC165642) Bos taurus clone CH240-167A10, WORKING DRAFT SEQU... 48 0.66 1
(FH038928) CHO_OF3295xg19f1.ab1 CHO_OF3 Nicotiana tabacum ge... 48 0.66 1
(ER337829) 1092344321148 Global-Ocean-Sampling_GS-34-01-01-1... 48 0.66 1
(ER326600) 1092344216009 Global-Ocean-Sampling_GS-34-01-01-1... 48 0.66 1
(CL442296) ZMMBBb0459C23f ZMMBBb (HindIII) Zea mays subsp. m... 48 0.66 1
(DY409229) 1512945 MARC 3PIG Sus scrofa cDNA 3', mRNA sequence. 48 0.66 1
(DY407886) 1511409 MARC 3PIG Sus scrofa cDNA 5', mRNA sequence. 48 0.66 1
(CN697923) E0401C02-5 NIA Mouse E11.5 whole embryo cDNA libr... 48 0.66 1
(CN697855) E0400E03-5 NIA Mouse E11.5 whole embryo cDNA libr... 48 0.66 1
(EW323724) rlin35_a13.y1 lin Sus scrofa cDNA 5', mRNA sequence. 48 0.66 1
(AC048356) Homo sapiens chromosome 20 clone RP11-250P20 map ... 38 0.72 6
(AC165370) Mus musculus BAC clone RP23-2N3 from chromosome 1... 38 0.80 6
(AC147132) Mus musculus BAC clone RP24-189K3 from chromosome... 42 0.84 7
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 38 0.84 10
(AC129316) Mus musculus BAC clone RP23-415J6 from chromosome... 42 0.87 7
(AL671863) Mouse DNA sequence from clone RP23-88N4 on chromo... 44 0.88 3
(AC175828) Medicago truncatula chromosome 2 BAC clone mte1-5... 36 0.94 5
(CQ581981) Sequence 9739 from Patent WO0171042. 46 1.0 3
(AF362369) Dictyostelium discoideum histidine kinase DhkG (d... 36 1.1 5
(AC105986) Mus musculus chromosome 15, clone RP24-94B11, com... 46 1.2 5
(AC012217) Homo sapiens chromosome 3 clone RP11-247J22 map 3... 40 1.3 8
(CR450837) Zebrafish DNA sequence from clone CH211-51L13 in ... 36 1.4 2
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 46 1.4 11
(CR385037) Zebrafish DNA sequence from clone CH211-256L21 in... 36 1.4 2
(AC115607) Dictyostelium discoideum chromosome 2 map 4559693... 36 1.5 7
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ... 34 1.5 6
(CU457470) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 1.6 4
(DY028321) 47RDOAH_UP_032_D04_16AUG2004_026 O. Alba 47RDOAH ... 36 1.9 3
(AC179977) Strongylocentrotus purpuratus clone R3-3036F10, W... 38 1.9 7
(CP000382) Clostridium novyi NT, complete genome. 36 1.9 20
(AC107150) Rattus norvegicus clone CH230-26K20, *** SEQUENCI... 40 2.1 2
(AC158779) Mus musculus chromosome 15, clone RP23-258P17, co... 46 2.1 5
>(AU263630) Dictyostelium discoideum vegetative cDNA clone:VSD193,
3' end single read.
Length = 642
Score = 1049 bits (529), Expect = 0.0
Identities = 529/529 (100%)
Strand = Plus / Plus
Query: 359 tatttttaattaatgagaataatagtaatagtaatggcacagattgtgaaatttgtacat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 tatttttaattaatgagaataatagtaatagtaatggcacagattgtgaaatttgtacat 81
Query: 419 tcattactaaatatgctgaaaatttattagaagcaaataaaacaattgaagatattgtaa 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 tcattactaaatatgctgaaaatttattagaagcaaataaaacaattgaagatattgtaa 141
Query: 479 aagttgttgatgatttctgtaaagttttaccatctcaatataagactgattgtgttgcca 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 aagttgttgatgatttctgtaaagttttaccatctcaatataagactgattgtgttgcca 201
Query: 539 tggcttcaaattatattccagcaattgttaaaatgttggagaacaattataatgcagaac 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tggcttcaaattatattccagcaattgttaaaatgttggagaacaattataatgcagaac 261
Query: 599 aagtttgtcaaaagttaagtttttgtttaccaccaccaccaccatcaactgaaggtacca 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aagtttgtcaaaagttaagtttttgtttaccaccaccaccaccatcaactgaaggtacca 321
Query: 659 ctctatgtgatctttgtttagatttcgctaatgatgctattgaaattgttgaaaattcag 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ctctatgtgatctttgtttagatttcgctaatgatgctattgaaattgttgaaaattcag 381
Query: 719 gtgatgttgaagcacaacttttaaaagaatgtaaatactttttctcattcataccaacaa 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gtgatgttgaagcacaacttttaaaagaatgtaaatactttttctcattcataccaacaa 441
Query: 779 ttgaaaatcaatgtgaaaaaattataagtgaaaattttgatgcaattgttaatgaaattc 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttgaaaatcaatgtgaaaaaattataagtgaaaattttgatgcaattgttaatgaaattc 501
Query: 839 aagatcacataaatccaacctctctttgccaaaatttcctccatatttg 887
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aagatcacataaatccaacctctctttgccaaaatttcctccatatttg 550
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,120,053,388
Number of extensions: 73780510
Number of successful extensions: 7643413
Number of sequences better than 10.0: 260
Length of query: 1026
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1002
Effective length of database: 97,308,875,965
Effective search space: 97503493716930
Effective search space used: 97503493716930
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.27 |
| Homology vs Protein |
Query= Contig-U10129-1 (Contig-U10129-1Q) /CSM_Contig/Contig-U10129-1Q.Seq.d
(1026 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U66367_1(U66367|pid:none) Dictyostelium discoideum SapA (sapA) m... 183 7e-45
BC105409_1(BC105409|pid:none) Bos taurus prosaposin, mRNA (cDNA ... 102 2e-20
AF108656_1(AF108656|pid:none) Gallus gallus prosaposin mRNA, com... 99 3e-19
(O13035) RecName: Full=Proactivator polypeptide; Contains: Rec... 99 3e-19
AB209776_1(AB209776|pid:none) Homo sapiens mRNA for prosaposin v... 97 9e-19
AK223290_1(AK223290|pid:none) Homo sapiens mRNA for prosaposin (... 97 9e-19
CR861454_1(CR861454|pid:none) Pongo abelii mRNA; cDNA DKFZp459G1... 97 9e-19
M60258_1(M60258|pid:none) Human mutant cerebroside sulfate activ... 97 9e-19
(Q6IBQ6) RecName: Full=Proactivator polypeptide; Contains: Rec... 97 9e-19
M60257_1(M60257|pid:none) Human mutant cerebroside sulfate activ... 97 9e-19
X57108_1(X57108|pid:none) Human gene for cerebroside sulfate act... 97 9e-19
AY892719_1(AY892719|pid:none) Synthetic construct Homo sapiens c... 97 9e-19
BC054988_1(BC054988|pid:none) Xenopus laevis hypothetical protei... 96 2e-18
AK299184_1(AK299184|pid:none) Homo sapiens cDNA FLJ54136 complet... 96 2e-18
CR861144_1(CR861144|pid:none) Pongo abelii mRNA; cDNA DKFZp459J1... 96 3e-18
CR456746_1(CR456746|pid:none) Homo sapiens full open reading fra... 95 3e-18
DQ062781_1(DQ062781|pid:none) Drosophila simulans saposin-relate... 95 3e-18
AF162129_1(AF162129|pid:none) Drosophila melanogaster ecdysone d... 95 4e-18
CR388420_1(CR388420|pid:none) Zebrafish DNA sequence from clone ... 94 6e-18
BT045905_1(BT045905|pid:none) Salmo salar clone ssal-rgf-536-147... 94 6e-18
BC056717_1(BC056717|pid:none) Danio rerio prosaposin, mRNA (cDNA... 94 6e-18
AF276996_1(AF276996|pid:none) Danio rerio lysosomal cofactor/neu... 94 6e-18
FN357292_36(FN357292|pid:none) Schistosoma mansoni genome sequen... 93 1e-17
BT045327_1(BT045327|pid:none) Salmo salar clone ssal-rgf-518-210... 93 1e-17
BT058972_1(BT058972|pid:none) Salmo salar clone ssal-rgf-517-167... 93 1e-17
AB008449_1(AB008449|pid:none) Bombyx mori mRNA for BmP109, compl... 92 3e-17
AB170870_1(AB170870|pid:none) Macaca fascicularis brain cDNA clo... 91 8e-17
AB169527_1(AB169527|pid:none) Macaca fascicularis brain cDNA, cl... 90 1e-16
AX704807_1(AX704807|pid:none) Sequence 39 from Patent WO03014151. 90 1e-16
AY815893_1(AY815893|pid:none) Schistosoma japonicum SJCHGC01869 ... 90 1e-16
BC080997_1(BC080997|pid:none) Xenopus laevis MGC80725 protein, m... 89 2e-16
S71616_1(S71616|pid:none) prosaposin [mice, mRNA, 2593 nt]. 86 2e-15
AK167719_1(AK167719|pid:none) Mus musculus 15 days pregnant adul... 85 5e-15
(Q61207) RecName: Full=Sulfated glycoprotein 1; Short=S... 85 5e-15
(P10960) RecName: Full=Sulfated glycoprotein 1; Short=S... 85 5e-15
AK159722_1(AK159722|pid:none) Mus musculus osteoclast-like cell ... 85 5e-15
BC061759_1(BC061759|pid:none) Rattus norvegicus prosaposin, mRNA... 85 5e-15
AK153404_1(AK153404|pid:none) Mus musculus bone marrow macrophag... 85 5e-15
AK088369_1(AK088369|pid:none) Mus musculus 2 days neonate thymus... 85 5e-15
AK149785_1(AK149785|pid:none) Mus musculus bone marrow macrophag... 85 5e-15
AK152280_1(AK152280|pid:none) Mus musculus bone marrow macrophag... 85 5e-15
AK167902_1(AK167902|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 85 5e-15
AK159164_1(AK159164|pid:none) Mus musculus osteoclast-like cell ... 85 5e-15
AK167073_1(AK167073|pid:none) Mus musculus blastocyst blastocyst... 84 8e-15
AK159634_1(AK159634|pid:none) Mus musculus osteoclast-like cell ... 84 1e-14
U57999_1(U57999|pid:none) Mus musculus prosaposin (psap\SGP-1) g... 83 2e-14
DQ363441_1(DQ363441|pid:none) Ictalurus punctatus clone C111BF07... 81 5e-14
(Q8C1C1) RecName: Full=Proactivator polypeptide-like 1; Contains... 81 7e-14
BC119540_1(BC119540|pid:none) Mus musculus prosaposin-like 1, mR... 80 1e-13
AF196309_1(AF196309|pid:none) Naegleria fowleri naegleriapore B ... 80 1e-13
(Q6NUJ1) RecName: Full=Proactivator polypeptide-like 1; Contains... 79 3e-13
BC068579_1(BC068579|pid:none) Homo sapiens prosaposin-like 1, mR... 79 3e-13
AF196308_1(AF196308|pid:none) Naegleria fowleri naegleriapore A ... 78 4e-13
CR859906_1(CR859906|pid:none) Pongo abelii mRNA; cDNA DKFZp468M2... 78 6e-13
AC115608_3(AC115608|pid:none) Dictyostelium discoideum chromosom... 78 6e-13
AC116956_84(AC116956|pid:none) Dictyostelium discoideum chromoso... 77 1e-12
CR855698_1(CR855698|pid:none) Xenopus tropicalis finished cDNA, ... 77 1e-12
EZ000561_1(EZ000561|pid:none) TSA: Culex tarsalis Ctar-515 sapos... 73 1e-11
AB170090_1(AB170090|pid:none) Macaca fascicularis brain cDNA clo... 72 2e-11
AY485648_1(AY485648|pid:none) Trichinella spiralis prosaposin mR... 65 4e-09
EU441799_1(EU441799|pid:none) Xenopus borealis clone Psap.a3 pro... 62 4e-08
S21770(S21770)saposin-C - bovine 62 4e-08
BC149798_1(BC149798|pid:none) Bos taurus prosaposin-like 1, mRNA... 59 2e-07
AL132968_11(AL132968|pid:none) Arabidopsis thaliana DNA chromoso... 59 2e-07
(P20097) RecName: Full=Saposin-C; AltName: Full=Co-beta-glucosid... 59 2e-07
BC091483_1(BC091483|pid:none) Homo sapiens prosaposin, mRNA (cDN... 58 6e-07
AF175768_1(AF175768|pid:none) Dictyostelium discoideum SAPLIP C ... 58 6e-07
DQ666082_1(DQ666082|pid:none) Artemia franciscana clone 13RP1.05... 58 6e-07
S47096(S47096)cynarase (EC 3.4.23.-) - cardoon 57 8e-07
T12049(T12049) cyprosin (EC 3.4.23.-) - cardoon (fragment) &X69... 57 8e-07
S49349(S49349) cyprosin (EC 3.4.23.-) - cardoon &X81984_1(X8198... 56 2e-06
Y09123_1(Y09123|pid:none) C.calcitrapa mRNA for aspartic protein... 55 4e-06
DQ648018_1(DQ648018|pid:none) Nicotiana tabacum aspartic proteas... 55 5e-06
(P40782) RecName: Full=Cyprosin; EC=3.4.23.-; Flags: Pr... 54 7e-06
D12777_1(D12777|pid:none) Oryza sativa Japonica Group mRNA for a... 54 9e-06
(P42211) RecName: Full=Aspartic proteinase; EC=3.4.23.-... 54 9e-06
BT003256_1(BT003256|pid:none) Drosophila melanogaster LD25144 fu... 54 1e-05
AF000262_3(AF000262|pid:none) Caenorhabditis elegans cosmid C48E... 53 1e-05
AY811214_1(AY811214|pid:none) Schistosoma japonicum clone SJCHGC... 52 3e-05
DQ071890_1(DQ071890|pid:none) Trichomonas vaginalis saposin-like... 52 4e-05
EF087704_1(EF087704|pid:none) Picea sitchensis clone WS02736_G22... 52 4e-05
B89567(B89567)protein T08A9.7 [imported] - Caenorhabditis elegans 51 6e-05
EF585741_1(EF585741|pid:none) Sonneratia alba isolate Sonn64_1 a... 51 6e-05
EF585743_1(EF585743|pid:none) Sonneratia ovata isolate Sonn64_3 ... 51 6e-05
EU969886_1(EU969886|pid:none) Zea mays clone 336826 unknown mRNA. 51 6e-05
EF585744_1(EF585744|pid:none) Sonneratia apetala isolate Sonn64_... 51 6e-05
BT064284_1(BT064284|pid:none) Zea mays full-length cDNA clone ZM... 51 6e-05
D32144_1(D32144|pid:none) Rice mRNA for aspartic protease, compl... 51 7e-05
(Q42456) RecName: Full=Aspartic proteinase oryzasin-1; ... 51 7e-05
AB025359_1(AB025359|pid:none) Helianthus annuus mRNA for asparti... 50 1e-04
AB045892_1(AB045892|pid:none) Nepenthes alata NaAP2 mRNA for asp... 50 2e-04
CT033825_6(CT033825|pid:none) Zebrafish DNA sequence from clone ... 50 2e-04
AJ313384_1(AJ313384|pid:none) Theobroma cacao mRNA for aspartic ... 49 2e-04
U51036_1(U51036|pid:none) Arabidopsis thaliana aspartic proteina... 49 3e-04
AC117075_38(AC117075|pid:none) Dictyostelium discoideum chromoso... 49 3e-04
AB045893_1(AB045893|pid:none) Nepenthes alata NaAP3 mRNA for asp... 49 4e-04
BC155325_1(BC155325|pid:none) Danio rerio cDNA clone IMAGE:70680... 49 4e-04
EF676352_1(EF676352|pid:none) Picea sitchensis clone WS02732_P05... 48 5e-04
EU960771_1(EU960771|pid:none) Zea mays clone 228459 aspartic pro... 48 6e-04
S41400(S41400)aspartic proteinase (EC 3.4.23.-) - wild cabbage (... 48 6e-04
T14446(T14446) aspartic proteinase (EC 3.4.23.-) - wild cabbage ... 48 6e-04
BT062875_1(BT062875|pid:none) Zea mays full-length cDNA clone ZM... 47 8e-04
EF678577_1(EF678577|pid:none) Picea sitchensis clone WS02928_J09... 47 8e-04
AF287258_1(AF287258|pid:none) Vigna unguiculata aspartic protein... 47 8e-04
AK317285_1(AK317285|pid:none) Arabidopsis thaliana AT1G62290 mRN... 47 0.001
AY826351_1(AY826351|pid:none) Fagopyrum esculentum aspartic prot... 47 0.001
EU968024_1(EU968024|pid:none) Zea mays clone 312992 aspartic pro... 47 0.001
AB069959_1(AB069959|pid:none) Glycine max soyAP1 mRNA for aspart... 47 0.001
AB219968_1(AB219968|pid:none) Triticum aestivum WAP1 mRNA for as... 46 0.002
(Q24824) RecName: Full=Pore-forming peptide ameobapore B; AltNam... 46 0.002
AB024999_1(AB024999|pid:none) Cicer arietinum mRNA for aspartic ... 46 0.002
T11686(T11686)aspartic proteinase (EC 3.4.23.-) - cowpea 46 0.002
AF082029_1(AF082029|pid:none) Hemerocallis hybrid cultivar senes... 46 0.002
AJ237674_1(AJ237674|pid:none) Cynara cardunculus mRNA for prepro... 46 0.002
DQ841161_1(DQ841161|pid:none) Xenopus laevis surfactant protein ... 45 0.003
AJ719872_1(AJ719872|pid:none) Gallus gallus mRNA for hypothetica... 45 0.003
BC170328_1(BC170328|pid:none) Xenopus laevis surfactant protein ... 45 0.003
AJ132884_1(AJ132884|pid:none) Cynara cardunculus mRNA for prepro... 45 0.004
AK066523_1(AK066523|pid:none) Oryza sativa Japonica Group cDNA c... 45 0.005
BC123315_1(BC123315|pid:none) Xenopus laevis hypothetical protei... 45 0.005
AF082528_1(AF082528|pid:none) Entamoeba dispar strain SAW 142 po... 44 0.007
(P42210) RecName: Full=Phytepsin; EC=3.4.23.40; AltName... 44 0.007
CQ974048_1(CQ974048|pid:none) Sequence 7 from Patent WO2004113520. 44 0.012
AB372260_1(AB372260|pid:none) Capsicum chinense mRNA for putativ... 43 0.015
AP008218_63(AP008218|pid:none) Oryza sativa (japonica cultivar-g... 43 0.015
T16599(T16599)hypothetical protein K09F5.3 - Caenorhabditis eleg... 43 0.020
AY222889_1(AY222889|pid:none) Schistosoma japonicum clone ZZZ315... 43 0.020
FN315627_1(FN315627|pid:none) Schistosoma japonicum isolate Anhu... 42 0.026
(Q54C16) RecName: Full=Sphingomyelin phosphodiesterase B; ... 42 0.026
AB070857_1(AB070857|pid:none) Glycine max soyAP2 mRNA for aspart... 42 0.034
(O18823) RecName: Full=Acyloxyacyl hydrolase; EC=3.1.1.... 42 0.034
DQ903691_1(DQ903691|pid:none) Ipomoea batatas aspartic protease ... 42 0.034
(P17129) RecName: Full=Pulmonary surfactant-associated protein B... 42 0.034
FN359295_4(FN359295|pid:none) Schistosoma mansoni genome sequenc... 42 0.034
(P34095) RecName: Full=Pore-forming peptide ameobapore A; AltNam... 42 0.045
BT075327_1(BT075327|pid:none) Osmerus mordax clone omor-eva-511-... 41 0.059
AK171572_1(AK171572|pid:none) Mus musculus B6-derived CD11 +ve d... 41 0.077
BX537304_6(BX537304|pid:none) Zebrafish DNA sequence from clone ... 41 0.077
AY222887_1(AY222887|pid:none) Schistosoma japonicum clone ZZZ290... 41 0.077
AC157894_29(AC157894|pid:none) Medicago truncatula chromosome 7 ... 41 0.077
(O35298) RecName: Full=Acyloxyacyl hydrolase; EC=3.1.1.... 41 0.077
AK150886_1(AK150886|pid:none) Mus musculus bone marrow macrophag... 41 0.077
AB021787_1(AB021787|pid:none) Pyrus pyrifolia PPFRU11 mRNA for a... 41 0.077
U37430_3(U37430|pid:none) Caenorhabditis elegans cosmid K09F5, c... 40 0.10
AC145372_5(AC145372|pid:none) Medicago truncatula clone mth2-5f4... 40 0.10
PC4080(PC4080)aspartic proteinase (EC 3.4.-.-) L5 - rice (fragme... 40 0.10
CP000591_303(CP000591|pid:none) Ostreococcus lucimarinus CCE9901... 40 0.13
FN315614_1(FN315614|pid:none) Schistosoma japonicum isolate Anhu... 40 0.13
FN315620_1(FN315620|pid:none) Schistosoma japonicum isolate Anhu... 40 0.13
AM779476_1(AM779476|pid:none) Sus scrofa mRNA for surfactant pro... 40 0.17
X57107_1(X57107|pid:none) Human gene for cerebroside sulfate act... 39 0.22
AB090278_1(AB090278|pid:none) Dugesia ryukyuensis Dryg mRNA for ... 39 0.22
(Q07831) RecName: Full=Non-pathogenic pore-forming peptide; ... 39 0.22
AM779477_1(AM779477|pid:none) Sus scrofa mRNA for surfactant pro... 39 0.22
U40417_6(U40417|pid:none) Caenorhabditis elegans cosmid T08A9, c... 39 0.22
M91198_1(M91198|pid:none) Staphylococcus xylosus BBM3XM (pSBBM3X... 39 0.29
AC000375_21(AC000375|pid:none) Sequence of BAC F19K23 from Arabi... 38 0.50
AE013599_4075(AE013599|pid:none) Drosophila melanogaster chromos... 38 0.50
AE013599_4074(AE013599|pid:none) Drosophila melanogaster chromos... 38 0.50
LNHUB(A31361;A28461;A27794;A27592;JU0162;S21134)pulmonary surfac... 38 0.65
U40417_4(U40417|pid:none) Caenorhabditis elegans cosmid T08A9, c... 38 0.65
(P07988) RecName: Full=Pulmonary surfactant-associated protein B... 38 0.65
U40417_8(U40417|pid:none) Caenorhabditis elegans cosmid T08A9, c... 38 0.65
DQ241852_1(DQ241852|pid:none) Solanum tuberosum clone 188C11 asp... 38 0.65
AF220198_1(AF220198|pid:none) Vitis riparia putative protein mRN... 38 0.65
DQ855414_1(DQ855414|pid:none) Ancylostoma caninum saposin-like p... 38 0.65
AF076635_1(AF076635|pid:none) Ovis aries clone SP-B 41 pulmonary... 37 0.85
AF107544_1(AF107544|pid:none) Ovis aries pulmonary surfactant-as... 37 0.85
FN315621_1(FN315621|pid:none) Schistosoma japonicum isolate Anhu... 37 0.85
(Q9UG35) RecName: Full=Dynein heavy chain 3, axonemal; AltName: ... 37 0.85
AL096732_1(AL096732|pid:none) Homo sapiens mRNA; cDNA DKFZp434N0... 37 0.85
FN357316_22(FN357316|pid:none) Schistosoma mansoni genome sequen... 37 1.1
LNRBB(A32421) pulmonary surfactant protein B precursor - rabbit ... 37 1.1
FN315624_1(FN315624|pid:none) Schistosoma japonicum isolate Anhu... 37 1.4
BT067347_1(BT067347|pid:none) Zea mays full-length cDNA clone ZM... 37 1.4
AY253925_1(AY253925|pid:none) Entamoeba invadens invapore A (IP-... 37 1.4
Z66566_3(Z66566|pid:none) Caenorhabditis elegans Cosmid T25C12, ... 37 1.4
FN315321_1(FN315321|pid:none) Schistosoma japonicum isolate Anhu... 36 1.9
AM461662_3(AM461662|pid:none) Vitis vinifera contig VV78X237399.... 36 1.9
AK072283_1(AK072283|pid:none) Oryza sativa Japonica Group cDNA c... 36 2.5
DQ317589_1(DQ317589|pid:none) Homo sapiens truncated surfactant ... 36 2.5
AF026213_5(AF026213|pid:none) Caenorhabditis elegans cosmid F08F... 35 3.2
FJ204407_1(FJ204407|pid:none) Pneumocystis jirovecii major surfa... 35 3.2
(Q556N7) RecName: Full=Frizzled and smoothened-like protein M; F... 35 3.2
U40797_3(U40797|pid:none) Caenorhabditis elegans cosmid C28C12, ... 35 3.2
U40853_1(U40853|pid:none) Oryctolagus cuniculus pulmonary surfac... 35 4.2
FN357320_28(FN357320|pid:none) Schistosoma mansoni genome sequen... 35 5.5
FN315317_1(FN315317|pid:none) Schistosoma japonicum isolate Anhu... 35 5.5
FN315319_1(FN315319|pid:none) Schistosoma japonicum isolate Anhu... 35 5.5
AY184216_1(AY184216|pid:none) Danio rerio NK lysin-like protein ... 34 7.2
DQ153190_1(DQ153190|pid:none) Ictalurus punctatus NK-lysin type ... 34 7.2
FN357351_12(FN357351|pid:none) Schistosoma mansoni genome sequen... 34 7.2
AY814651_1(AY814651|pid:none) Schistosoma japonicum SJCHGC09492 ... 34 7.2
DQ153187_1(DQ153187|pid:none) Ictalurus punctatus NK-lysin type ... 34 9.4
FN315316_1(FN315316|pid:none) Schistosoma japonicum isolate Anhu... 34 9.4
AF266465_1(AF266465|pid:none) Manihot esculenta aspartic proteas... 34 9.4
(Q8I1U7) RecName: Full=Structural maintenance of chromosomes pro... 34 9.4
>U66367_1(U66367|pid:none) Dictyostelium discoideum SapA (sapA)
mRNA, partial cds.
Length = 456
Score = 183 bits (465), Expect = 7e-45
Identities = 102/267 (38%), Positives = 146/267 (54%), Gaps = 11/267 (4%)
Frame = +1
Query: 109 CNLCNAIVGFAEKYVTTNATEQELIKKLDDYCGILPSE-FSQSCVETVNNYGVLIIRLLI 285
C +C I Y+ N TE ++++ LD+ C +L S+ + +C + Y II ++
Sbjct: 69 CLVCEFISEKIVTYLEANQTETQILQYLDNDCKLLKSDNWISTCQNLIQEYEPQIIAVVE 128
Query: 286 NKEDADNICIMIELCPKXXXXXXXLFLINENNSNSNGTDCEICTFITKYAENLLEANKTI 465
+C I+ C F+ S+ TDCEICTFI+ YAEN LE NKT+
Sbjct: 129 GFMAPSELCQKIKFCSSSSSTNDFDFI------GSSTTDCEICTFISGYAENFLEENKTL 182
Query: 466 EDIVKVVDDFCKVLPSQYKTDCVAMASNYIPAIVKMLENNYNAEQVCQKLSFCLPPPPPS 645
EDI+KVVDDFCK+LP+ YKTDCVAMASNYIPAI+KMLEN+ + QVCQKL+ C P P S
Sbjct: 183 EDIIKVVDDFCKILPAAYKTDCVAMASNYIPAIIKMLENDNSPGQVCQKLNLCPAPTPTS 242
Query: 646 TEGT----------TLCDLCLDFANDAIEIVENSGDVEAQLLKECKYFFSFIPTIENQCE 795
T T +C+ + FA + +S V+ L EC + + C
Sbjct: 243 TPSTIKIDVNINKCEICETVIGFAEKYLGSALDSQTVKTFLQNECNKLPGVVGDV---CN 299
Query: 796 KIISENFDAIVNEIQDHINPTSLCQNF 876
++++E + V +++ NPT +CQ F
Sbjct: 300 EVVNEYLEFAVTQLEAKFNPTEICQLF 326
Score = 123 bits (309), Expect = 9e-27
Identities = 72/237 (30%), Positives = 125/237 (52%), Gaps = 11/237 (4%)
Frame = +1
Query: 211 LPSEFSQSCVETVNNYGVLIIRLLINKEDADNICIMIELCPK---XXXXXXXLFLINENN 381
LP E++Q CVE +NNYGVL++RLLIN+E +N+C+M+ELC K + + +
Sbjct: 1 LPKEYAQDCVEIINNYGVLMVRLLINRESPENVCLMMELCSKSSSELIMPINVVAVGDEV 60
Query: 382 SNSNGT-DCEICTFITKYAENLLEANKTIEDIVKVVDDFCKVLPS-QYKTDCVAMASNYI 555
N G+ +C +C FI++ LEAN+T I++ +D+ CK+L S + + C + Y
Sbjct: 61 DNVEGSGECLVCEFISEKIVTYLEANQTETQILQYLDNDCKLLKSDNWISTCQNLIQEYE 120
Query: 556 PAIVKMLENNYNAEQVCQKLSFCLPPPPPST-----EGTTLCDLCLDFANDAIEIVENSG 720
P I+ ++E ++CQK+ FC + TT C++C + A +E +
Sbjct: 121 PQIIAVVEGFMAPSELCQKIKFCSSSSSTNDFDFIGSSTTDCEICTFISGYAENFLEENK 180
Query: 721 DVEAQLLKECKYFFSFIP-TIENQCEKIISENFDAIVNEIQDHINPTSLCQNFLHIC 888
+E ++K F +P + C + S AI+ +++ +P +CQ L++C
Sbjct: 181 TLE-DIIKVVDDFCKILPAAYKTDCVAMASNYIPAIIKMLENDNSPGQVCQK-LNLC 235
Score = 102 bits (255), Expect = 2e-20
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 1/231 (0%)
Frame = +1
Query: 82 DSIKSDEITCNLCNAIVGFAEKYVTTNATEQELIKKLDDYCGILPSEFSQSCVETVNNYG 261
D I S C +C I G+AE ++ N T +++IK +DD+C ILP+ + CV +NY
Sbjct: 153 DFIGSSTTDCEICTFISGYAENFLEENKTLEDIIKVVDDFCKILPAAYKTDCVAMASNYI 212
Query: 262 VLIIRLLINKEDADNICIMIELCPKXXXXXXXLFLINENNSNSNGTDCEICTFITKYAEN 441
II++L N +C + LCP + + N N CEIC + +AE
Sbjct: 213 PAIIKMLENDNSPGQVCQKLNLCPAPTPTSTPSTIKIDVNINK----CEICETVIGFAEK 268
Query: 442 LLEANKTIEDIVKVVDDFCKVLPSQYKTDCVAMASNYIPAIVKMLENNYNAEQVCQKLSF 621
L + + + + + C LP C + + Y+ V LE +N ++CQ SF
Sbjct: 269 YLGSALDSQTVKTFLQNECNKLPGVVGDVCNEVVNEYLEFAVTQLEAKFNPTEICQLFSF 328
Query: 622 CLPPPPPSTEGTTLCDLCLDFANDAIEI-VENSGDVEAQLLKECKYFFSFI 771
C T G+ ++DA EI + N+ ++ Q+ C+ +F+
Sbjct: 329 C-------TAGSE--------SSDASEIKINNNSYIDCQI---CEVLANFV 361
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,154,104,259
Number of extensions: 19479806
Number of successful extensions: 86476
Number of sequences better than 10.0: 197
Number of HSP's gapped: 85274
Number of HSP's successfully gapped: 383
Length of query: 342
Length of database: 1,040,966,779
Length adjustment: 129
Effective length of query: 213
Effective length of database: 627,614,014
Effective search space: 133681784982
Effective search space used: 133681784982
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
2 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
1 |
| FC-IC (SUB) |
1 |