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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U10123-1
Contig ID Contig-U10123-1
Contig update 2002. 9.13
Contig sequence 
>Contig-U10123-1 (Contig-U10123-1Q) /CSM_Contig/Contig-U10123-1Q.Seq.d
CATTATTAAAAAAAATTAACAACAATGACTAATATTTCATTATTATCAAA
ATCTAAATCATTCAATGGTGAAGTTAGAAGATATAGTCATAAATCAACAT
CATTATCATGTGATATGAAATTTCATGTTTATGTACCATCAAAATCATCC
ACTCCATCATCAGTACTATGGTTCTTATCTGGTTTAACATGTACAGATGA
AAATTTCATTCAAAAAAGTGGTGCAATTCAATATGCTAGTCAAAATAATA
TATTCTTAGTTTGTCCTGATACTAGTCCAAGAGGTATTACAATTGAAAAT
GCAGAAGATAAATGGCAAGGACCAGGATTTGGAGCAGGATATTATTTAAA
TTCAACAACAGATAAATATAAAGCTCATTTCCAAATGTTTACATATATTA
CAAAAGAATTATTTGAATTAATTAATAAAGAATTCACAGATACAATTAAT
ATTAATAAACATTCAATTTTTGGTCATTCAATGGGTGGACTTGGAGCAAT
TTCATTATTTATTAAAACTAATGGTCAATATAAATCTGTTAGTGCATTTT
CACCAATTTCAAATCCAGTCAATTGCGATTGGTCTTTACATTCATTTAAA
GAATATTTAGGTACAGAGAATAAAGAAGCTTGGTTACAATATGATCCTTG
CCATCTTTTGAAAAATTATGATGGTAAACCATTCGATTTATTAGTTGACC
AAGGTTCGGCTGATGAATTTTTTAATGATTTGAAATTTGATAATCTTGAA
TTAGCTTGTAAAGAAAATTCAAAAATTAATTTAATTGCAAGATTACAAGA
CGGTTATAATCATGGTTATTTCTATATCTCCACTTTTATTAAAGATCATA
TTGAATATCATTCAAAACATTTAAATAAATAAAATTTAAAAAATTTTGTT
TTATTAATCAAAAAAAAAAAAAAAAAAAAAAAANGNTNGTCCCTGGGCCG
GNACCNCCCTAAGCCGAATTNTGCANATNTCCATCACCTGGGGNGGGCCG
NTCGAGC
Gap no gap
Contig length 1007
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 193711
End point 194643
Strand (PLUS/MINUS) PLUS
Number of clones 4
Number of EST 4
Link to clone list U10123
List of clone(s) 

est1=SSG457Z,1,187
est2=SSG148E,29,466
est3=SSG457F,426,940
est4=FC-IC1121Z,613,1007
Translated Amino Acid sequence 
hy*KKLTTMTNISLLSKSKSFNGEVRRYSHKSTSLSCDMKFHVYVPSKSSTPSSVLWFLS
GLTCTDENFIQKSGAIQYASQNNIFLVCPDTSPRGITIENAEDKWQGPGFGAGYYLNSTT
DKYKAHFQMFTYITKELFELINKEFTDTININKHSIFGHSMGGLGAISLFIKTNGQYKSV
SAFSPISNPVNCDWSLHSFKEYLGTENKEAWLQYDPCHLLKNYDGKPFDLLVDQGSADEF
FNDLKFDNLELACKENSKINLIARLQDGYNHGYFYISTFIKDHIEYHSKHLNK*nlknfv
llikkkkkkkkxxslgrxxpkpnxaxxhhlgxaxr
Translated Amino Acid sequence (All Frames) 
Frame A:
hy*KKLTTMTNISLLSKSKSFNGEVRRYSHKSTSLSCDMKFHVYVPSKSSTPSSVLWFLS
GLTCTDENFIQKSGAIQYASQNNIFLVCPDTSPRGITIENAEDKWQGPGFGAGYYLNSTT
DKYKAHFQMFTYITKELFELINKEFTDTININKHSIFGHSMGGLGAISLFIKTNGQYKSV
SAFSPISNPVNCDWSLHSFKEYLGTENKEAWLQYDPCHLLKNYDGKPFDLLVDQGSADEF
FNDLKFDNLELACKENSKINLIARLQDGYNHGYFYISTFIKDHIEYHSKHLNK*nlknfv
llikkkkkkkkxxslgrxxpkpnxaxxhhlgxaxr


Frame B:
iikkn*qq*lifhyyqnlnhsmvkledivinqhhyhvi*nfmfmyhqnhplhhqyygsyl
v*hvqmkisfkkvvqfnmlvkiiys*fvlilvqevlqlkmqkingkdqdleqdii*iqqq
inikliskclhilqknyln*liknsqiqliliniqflviqwvdleqfhyllklmvninll
vhfhqfqiqsiaiglyihlkni*vqrikklgynmilaif*kimmvnhsiy*ltkvrlmnf
lmi*nliiln*lvkkiqkli*lqdyktviimvisisplllkiilniiqni*inki*kilf
y*skkkkkkkxxxpwagtxlsrixxxsitwggpxe


Frame C:
llkkinnnd*yfiiiki*iiqw*s*ki*s*iniiim*yeisclctikiihsiistmvliw
fnmyr*kfhskkwcnsic*sk*yilsls*y*skryyn*kcrr*martriwsrilfkfnnr
*i*ssfpnvyiyykrii*in**rihryn*y**tfnfwsfngwtwsnfiiy*n*wsi*ic*
ciftnfkssqlrlvftfi*rifryre*rslvti*slpsfekl*w*tirfis*prfg**if
**fei**s*isl*rkfkn*fnckitrrl*swlflylhfy*rsy*isfktfk*ikfkkfcf
inqkkkkkkkxxvpgpxpp*aexcxxpspgxgrss
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U10123-1 (Contig-U10123-1Q)
/CSM_Contig/Contig-U10123-1Q.Seq.d
         (1007 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U10123-1 (Contig-U10123-1Q) /CSM_Contig/Conti...  1681  0.0
Contig-U12462-1 (Contig-U12462-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U14578-1 (Contig-U14578-1Q) /CSM_Contig/Conti...    38  0.018
Contig-U11983-1 (Contig-U11983-1Q) /CSM_Contig/Conti...    38  0.018
Contig-U09510-1 (Contig-U09510-1Q) /CSM_Contig/Conti...    38  0.018
Contig-U03470-1 (Contig-U03470-1Q) /CSM_Contig/Conti...    38  0.018
Contig-U12522-1 (Contig-U12522-1Q) /CSM_Contig/Conti...    36  0.071
Contig-U11615-1 (Contig-U11615-1Q) /CSM_Contig/Conti...    36  0.071
Contig-U05372-1 (Contig-U05372-1Q) /CSM_Contig/Conti...    36  0.071
Contig-U11414-1 (Contig-U11414-1Q) /CSM_Contig/Conti...    34  0.28

>Contig-U10123-1 (Contig-U10123-1Q) /CSM_Contig/Contig-U10123-1Q.Seq.d
          Length = 1007

 Score = 1681 bits (848), Expect = 0.0
 Identities = 848/848 (100%)
 Strand = Plus / Plus

                                                                       
Query: 16  ttaacaacaatgactaatatttcattattatcaaaatctaaatcattcaatggtgaagtt 75
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16  ttaacaacaatgactaatatttcattattatcaaaatctaaatcattcaatggtgaagtt 75

                                                                       
Query: 76  agaagatatagtcataaatcaacatcattatcatgtgatatgaaatttcatgtttatgta 135
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76  agaagatatagtcataaatcaacatcattatcatgtgatatgaaatttcatgtttatgta 135

                                                                       
Query: 136 ccatcaaaatcatccactccatcatcagtactatggttcttatctggtttaacatgtaca 195
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 ccatcaaaatcatccactccatcatcagtactatggttcttatctggtttaacatgtaca 195

                                                                       
Query: 196 gatgaaaatttcattcaaaaaagtggtgcaattcaatatgctagtcaaaataatatattc 255
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gatgaaaatttcattcaaaaaagtggtgcaattcaatatgctagtcaaaataatatattc 255

                                                                       
Query: 256 ttagtttgtcctgatactagtccaagaggtattacaattgaaaatgcagaagataaatgg 315
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ttagtttgtcctgatactagtccaagaggtattacaattgaaaatgcagaagataaatgg 315

                                                                       
Query: 316 caaggaccaggatttggagcaggatattatttaaattcaacaacagataaatataaagct 375
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 caaggaccaggatttggagcaggatattatttaaattcaacaacagataaatataaagct 375

                                                                       
Query: 376 catttccaaatgtttacatatattacaaaagaattatttgaattaattaataaagaattc 435
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 catttccaaatgtttacatatattacaaaagaattatttgaattaattaataaagaattc 435

                                                                       
Query: 436 acagatacaattaatattaataaacattcaatttttggtcattcaatgggtggacttgga 495
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 acagatacaattaatattaataaacattcaatttttggtcattcaatgggtggacttgga 495

                                                                       
Query: 496 gcaatttcattatttattaaaactaatggtcaatataaatctgttagtgcattttcacca 555
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gcaatttcattatttattaaaactaatggtcaatataaatctgttagtgcattttcacca 555

                                                                       
Query: 556 atttcaaatccagtcaattgcgattggtctttacattcatttaaagaatatttaggtaca 615
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 atttcaaatccagtcaattgcgattggtctttacattcatttaaagaatatttaggtaca 615

                                                                       
Query: 616 gagaataaagaagcttggttacaatatgatccttgccatcttttgaaaaattatgatggt 675
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gagaataaagaagcttggttacaatatgatccttgccatcttttgaaaaattatgatggt 675

                                                                       
Query: 676 aaaccattcgatttattagttgaccaaggttcggctgatgaattttttaatgatttgaaa 735
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 aaaccattcgatttattagttgaccaaggttcggctgatgaattttttaatgatttgaaa 735

                                                                       
Query: 736 tttgataatcttgaattagcttgtaaagaaaattcaaaaattaatttaattgcaagatta 795
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tttgataatcttgaattagcttgtaaagaaaattcaaaaattaatttaattgcaagatta 795

                                                                       
Query: 796 caagacggttataatcatggttatttctatatctccacttttattaaagatcatattgaa 855
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 caagacggttataatcatggttatttctatatctccacttttattaaagatcatattgaa 855

                   
Query: 856 tatcattc 863
           ||||||||
Sbjct: 856 tatcattc 863


 Score = 71.9 bits (36), Expect = 1e-12
 Identities = 51/51 (100%)
 Strand = Plus / Plus

                                                              
Query: 939 gtccctgggccggnaccnccctaagccgaattntgcanatntccatcacct 989
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939 gtccctgggccggnaccnccctaagccgaattntgcanatntccatcacct 989


>Contig-U12462-1 (Contig-U12462-1Q) /CSM_Contig/Contig-U12462-1Q.Seq.d
          Length = 1371

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 403 aaagaattatttgaattaattaataa 428
           ||||||||||| ||||||||||||||
Sbjct: 860 aaagaattattagaattaattaataa 885


>Contig-U14578-1 (Contig-U14578-1Q) /CSM_Contig/Contig-U14578-1Q.Seq.d
          Length = 395

 Score = 38.2 bits (19), Expect = 0.018
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 764 aaaattcaaaaattaattt 782
           |||||||||||||||||||
Sbjct: 251 aaaattcaaaaattaattt 233


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 20,952
Number of Sequences: 6905
Number of extensions: 20952
Number of successful extensions: 2673
Number of sequences better than 10.0: 289
length of query: 1007
length of database: 5,674,871
effective HSP length: 16
effective length of query: 991
effective length of database: 5,564,391
effective search space: 5514311481
effective search space used: 5514311481
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.18
Homology vs DNA 
Query= Contig-U10123-1 (Contig-U10123-1Q) /CSM_Contig/Contig-U10123-1Q.Seq.d
         (1007 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(C90056) Dictyostelium discoideum slug cDNA, clone SSG148.        771   0.0    1
(AU272144) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   498   e-150  2
(AU073235) Dictyostelium discoideum slug cDNA, clone SSG457.      446   e-121  1
(C94141) Dictyostelium discoideum slug cDNA, clone SSG457.        194   4e-45  1
(DY894435) CeleSEQ14007 Cunninghamella elegans pBluescript (...    60   4e-14  4
(EK439127) 1095521450185 Global-Ocean-Sampling_GS-31-01-01-1...    48   1e-06  2
(CF803910) rg76h07.y1 Meloidogyne hapla female SL1 pGEM Melo...    46   2e-05  3
(CF803872) rg76d11.y1 Meloidogyne hapla female SL1 pGEM Melo...    46   2e-05  3
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734...    46   3e-05  19
(BX248583) Blochmannia floridanus complete genome.                 44   4e-05  17
(DQ889678) Bacillus cereus strain AH818 plasmid pPER272, com...    62   4e-05  1
(DQ889677) Bacillus cereus strain AH820 plasmid pPER272, com...    62   4e-05  1
(DQ889676) Bacillus cereus strain AH187 plasmid pCER270, com...    62   4e-05  1
(ER352848) 1092347052082 Global-Ocean-Sampling_GS-34-01-01-1...    42   2e-04  2
(BQ584506) E011858-024-003-G07-SP6 MPIZ-ADIS-024-inflorescen...    54   5e-04  2
(BQ488379) 34-E8885-006-003-D09-T3 Sugar beet MPIZ-ADIS-006 ...    54   6e-04  2
(BQ584210) S014410-024-003-G07-SP6 MPIZ-ADIS-024-inflorescen...    54   7e-04  2
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    36   0.001  14
(ER562369) 1093015752039 Global-Ocean-Sampling_GS-36-01-01-2...    40   0.002  4
(EJ136876) 1092343609218 Global-Ocean-Sampling_GS-27-01-01-1...    40   0.002  4
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi...    32   0.004  20
(AE017308) Mycoplasma mobile 163K complete genome.                 34   0.007  18
(ER496023) 1093015347996 Global-Ocean-Sampling_GS-35-01-01-1...    40   0.018  3
(EJ605243) 1092962001719 Global-Ocean-Sampling_GS-29-01-01-1...    42   0.018  3
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047...    32   0.018  16
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255...    40   0.021  21
(AC165314) Mus musculus chromosome 3 clone RP23-52E7 map 3, ...    40   0.026  2
(EJ614397) 1092963008413 Global-Ocean-Sampling_GS-29-01-01-1...    40   0.027  3
(AC122055) Mus musculus BAC clone RP24-465O15 from chromosom...    40   0.027  2
(AC168515) Strongylocentrotus purpuratus clone R3-3108I21, W...    38   0.034  8
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041...    38   0.038  13
(EJ953906) 1093018962065 Global-Ocean-Sampling_GS-30-02-01-1...    52   0.041  1
(EJ936302) 1093018840494 Global-Ocean-Sampling_GS-30-02-01-1...    52   0.041  1
(DB743529) Apis mellifera head cDNA, RIKEN full-length enric...    52   0.041  1
(EJ943511) 1093018900943 Global-Ocean-Sampling_GS-30-02-01-1...    44   0.072  3
(FG804620) G1148P38FL22.T0 Anolis carolinensis pooled normal...    34   0.074  3
(FG678538) G1143P323FP20.T0 Anolis carolinensis pooled norma...    34   0.081  3
(FG706233) G1144P319FC20.T0 Anolis carolinensis pooled norma...    34   0.081  3
(FG669895) G1143P317FM5.T0 Anolis carolinensis pooled normal...    34   0.082  3
(FG706638) G1144P346FN7.T0 Anolis carolinensis pooled normal...    34   0.083  3
(EJ961549) 1093022006323 Global-Ocean-Sampling_GS-30-02-01-1...    44   0.084  3
(FG665112) G1142P33FH7.T0 Anolis carolinensis pooled normali...    34   0.086  3
(FG781828) G1147P357FH18.T0 Anolis carolinensis pooled norma...    34   0.087  3
(FG711449) G1144P312FF19.T0 Anolis carolinensis pooled norma...    34   0.089  3
(FG670926) G1143P324FM17.T0 Anolis carolinensis pooled norma...    34   0.089  3
(FG726243) G1145P36FA9.T0 Anolis carolinensis pooled normali...    34   0.090  3
(FG657514) G1142P326FA14.T0 Anolis carolinensis pooled norma...    34   0.091  3
(FG712769) G1144P345FF11.T0 Anolis carolinensis pooled norma...    34   0.091  3
(FG793588) G1148P326FO11.T0 Anolis carolinensis pooled norma...    34   0.092  3
(EK121565) 1092963535513 Global-Ocean-Sampling_GS-31-01-01-1...    50   0.16   1
(EK120428) 1092963361175 Global-Ocean-Sampling_GS-31-01-01-1...    50   0.16   1
(ES393966) MUS13-I02.x1d-t SHGC-MUS Mytilus californianus cD...    50   0.16   1
(AJ703480) Zantedeschia aethiopica EST, clone N-18-8.              40   0.17   2
(EJ527905) 1092955200967 Global-Ocean-Sampling_GS-29-01-01-1...    42   0.18   2
(AJ703643) Zantedeschia aethiopica EST, clone B-11-9.              40   0.19   2
(FH357780) CHO_OF4683xg13f1.ab1 CHO_OF4 Nicotiana tabacum ge...    36   0.26   3
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl...    36   0.26   13
(AC115594) Dictyostelium discoideum chromosome 2 map 4071862...    34   0.30   8
(AF538053) Monosiga brevicollis mitochondrion, complete genome.    36   0.32   7
(ET823125) CHO_OF764xn20r1.ab1 CHO_OF Nicotiana tabacum geno...    36   0.34   3
(AE014832) Plasmodium falciparum 3D7 chromosome 10 section 4...    34   0.37   11
(AB104827) Candida boidinii FGH1 gene for S-formylglutathion...    34   0.38   3
(AC069542) Homo sapiens chromosome 10 clone RP11-390B4, comp...    40   0.42   7
(CP000551) Prochlorococcus marinus str. AS9601, complete gen...    34   0.42   21
(CU640376) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   0.46   7
(EW748488) sb_006_03J15_m13reverselong Onychiurus arcticus d...    46   0.47   2
(BF294849) 009PbE05 Pb cDNA #17, Tommaso Pace, Marta Ponzi, ...    34   0.47   2
(EW753069) sb_007_06M14_m13reverselong Onychiurus arcticus r...    46   0.49   2
(FF636415) G825P579RG5.T0 Acorn worm normalized gastrula pEx...    46   0.51   2
(EK059039) 1092960059271 Global-Ocean-Sampling_GS-31-01-01-1...    46   0.57   2
(EK528905) 1095516000240 Global-Ocean-Sampling_GS-32-01-01-1...    42   0.57   2
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    34   0.61   14
(EK374527) 1095469432666 Global-Ocean-Sampling_GS-31-01-01-1...    42   0.62   2
(BH149789) ENTPJ46TF Entamoeba histolytica Sheared DNA Entam...    40   0.63   2
(AY815093) Schistosoma japonicum SJCHGC06544 protein mRNA, c...    48   0.65   1
(EJ875424) 1093018366862 Global-Ocean-Sampling_GS-30-02-01-1...    48   0.65   1
(EJ756349) 1092963085018 Global-Ocean-Sampling_GS-30-02-01-1...    48   0.65   1
(EJ740071) 1092962010493 Global-Ocean-Sampling_GS-30-02-01-1...    48   0.65   1
(EJ285184) 1095368016052 Global-Ocean-Sampling_GS-27-01-01-1...    48   0.65   1
(EJ212788) 1092349124216 Global-Ocean-Sampling_GS-27-01-01-1...    48   0.65   1
(EJ150472) 1092343756346 Global-Ocean-Sampling_GS-27-01-01-1...    48   0.65   1
(CV671930) RE-3-SJ-L_G03_RE-3-SJ-LG03-T7 Schistosoma japonic...    48   0.65   1
(CV671218) RE-3-SJ-A_F04_RE-3-SJ-AF04-T7 Schistosoma japonic...    48   0.65   1
(BU779627) SJEFAC05 SJE Schistosoma japonicum cDNA, mRNA seq...    48   0.65   1
(BU776651) SJECPC06 SJE Schistosoma japonicum cDNA, mRNA seq...    48   0.65   1
(BU775050) SJEAXG08 SJE Schistosoma japonicum cDNA, mRNA seq...    48   0.65   1
(BU772570) SJEETE01 SJE Schistosoma japonicum cDNA, mRNA seq...    48   0.65   1
(BU766783) SJEAJH01 SJE Schistosoma japonicum cDNA, mRNA seq...    48   0.65   1
(EV175006) 0160337 Brassica napus Etiolated seedlings (Uni-Z...    48   0.65   1
(EV174731) 0159580 Brassica napus Etiolated seedlings (Uni-Z...    48   0.65   1
(CP000678) Methanobrevibacter smithii ATCC 35061, complete g...    48   0.65   1
(AZ692368) ENTMP18TF Entamoeba histolytica Sheared DNA Entam...    40   0.65   2
(BH153936) ENTSG05TR Entamoeba histolytica Sheared DNA Entam...    40   0.65   2
(BH133011) ENTOR54TF Entamoeba histolytica Sheared DNA Entam...    40   0.66   2
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643...    40   0.87   9
(AL844509) Plasmodium falciparum chromosome 13.                    36   0.93   15
(AF160864) Tetrahymena pyriformis mitochondrial DNA, complet...    34   0.95   7
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    38   0.97   15
(FH516399) CHO_OF4809xi14f1.ab1 CHO_OF4 Nicotiana tabacum ge...    36   1.0    3
(CU407153) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   1.1    4

>(C90056) Dictyostelium discoideum slug cDNA, clone SSG148.
          Length = 438

 Score =  771 bits (389), Expect = 0.0
 Identities = 389/389 (100%)
 Strand = Plus / Plus


Query: 475 cattcaatgggtggacttggagcaatttcattatttattaaaactaatggtcaatataaa 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cattcaatgggtggacttggagcaatttcattatttattaaaactaatggtcaatataaa 60


Query: 535 tctgttagtgcattttcaccaatttcaaatccagtcaattgcgattggtctttacattca 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tctgttagtgcattttcaccaatttcaaatccagtcaattgcgattggtctttacattca 120


Query: 595 tttaaagaatatttaggtacagagaataaagaagcttggttacaatatgatccttgccat 654
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttaaagaatatttaggtacagagaataaagaagcttggttacaatatgatccttgccat 180


Query: 655 cttttgaaaaattatgatggtaaaccattcgatttattagttgaccaaggttcggctgat 714
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttttgaaaaattatgatggtaaaccattcgatttattagttgaccaaggttcggctgat 240


Query: 715 gaattttttaatgatttgaaatttgataatcttgaattagcttgtaaagaaaattcaaaa 774
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaattttttaatgatttgaaatttgataatcttgaattagcttgtaaagaaaattcaaaa 300


Query: 775 attaatttaattgcaagattacaagacggttataatcatggttatttctatatctccact 834
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attaatttaattgcaagattacaagacggttataatcatggttatttctatatctccact 360


Query: 835 tttattaaagatcatattgaatatcattc 863
           |||||||||||||||||||||||||||||
Sbjct: 361 tttattaaagatcatattgaatatcattc 389

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,233,507,085
Number of extensions: 80131844
Number of successful extensions: 7242714
Number of sequences better than 10.0: 263
Length of query: 1007
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 983
Effective length of database: 97,308,875,965
Effective search space: 95654625073595
Effective search space used: 95654625073595
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 6.27
Homology vs Protein 
Query= Contig-U10123-1 (Contig-U10123-1Q) /CSM_Contig/Contig-U10123-1Q.Seq.d
         (1007 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P10768) RecName: Full=S-formylglutathione hydrolase;          S...   258   2e-67
(Q9GJT2) RecName: Full=S-formylglutathione hydrolase;          S...   258   2e-67
AY891981_1(AY891981|pid:none) Synthetic construct Homo sapiens c...   256   1e-66
AY889522_1(AY889522|pid:none) Synthetic construct Homo sapiens c...   256   1e-66
BT052127_1(BT052127|pid:none) Medicago truncatula clone MTYF9_FA...   254   3e-66
BC081180_1(BC081180|pid:none) Xenopus laevis MGC84363 protein, m...   252   1e-65
EF147170_1(EF147170|pid:none) Populus trichocarpa clone WS01228_...   252   2e-65
BC093144_1(BC093144|pid:none) Danio rerio esterase D/formylgluta...   251   2e-65
(Q9R0P3) RecName: Full=S-formylglutathione hydrolase;          S...   251   3e-65
AK010683_1(AK010683|pid:none) Mus musculus ES cells cDNA, RIKEN ...   251   3e-65
BC087823_1(BC087823|pid:none) Xenopus tropicalis hypothetical LO...   248   2e-64
AE014297_2863(AE014297|pid:none) Drosophila melanogaster chromos...   248   2e-64
AE014297_2864(AE014297|pid:none) Drosophila melanogaster chromos...   247   5e-64
AY087636_1(AY087636|pid:none) Arabidopsis thaliana clone 37276 m...   246   9e-64
CP000606_1535(CP000606|pid:none) Shewanella loihica PV-4, comple...   245   2e-63
AK059803_1(AK059803|pid:none) Oryza sativa Japonica Group cDNA c...   243   8e-63
CP000790_2169(CP000790|pid:none) Vibrio harveyi ATCC BAA-1116 ch...   242   2e-62
FM178379_745(FM178379|pid:none) Aliivibrio salmonicida LFI1238 c...   241   2e-62
BT050016_1(BT050016|pid:none) Salmo salar clone ssal-rgb2-541-02...   237   4e-61
CP000302_3742(CP000302|pid:none) Shewanella denitrificans OS217,...   234   3e-60
CP000469_1826(CP000469|pid:none) Shewanella sp. ANA-3, complete ...   234   5e-60
CP000563_2374(CP000563|pid:none) Shewanella baltica OS155, compl...   233   6e-60
CP000681_2158(CP000681|pid:none) Shewanella putrefaciens CN-32, ...   233   6e-60
CP000444_2172(CP000444|pid:none) Shewanella sp. MR-7, complete g...   233   1e-59
CP000094_1125(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ...   233   1e-59
AL110500_1(AL110500|pid:none) Caenorhabditis elegans YAC Y87G2A,...   232   2e-59
CP000503_1819(CP000503|pid:none) Shewanella sp. W3-18-1, complet...   231   2e-59
CP000749_3637(CP000749|pid:none) Marinomonas sp. MWYL1, complete...   231   2e-59
CP000447_4021(CP000447|pid:none) Shewanella frigidimarina NCIMB ...   230   7e-59
CP000285_978(CP000285|pid:none) Chromohalobacter salexigens DSM ...   230   7e-59
AI2156(AI2156) S-formylglutathione hydrolase [imported] - Nostoc...   229   1e-58
BT052821_1(BT052821|pid:none) Medicago truncatula clone MTYFH_FI...   229   1e-58
CU928163_388(CU928163|pid:none) Escherichia coli UMN026 chromoso...   228   2e-58
(B1LIP0) RecName: Full=S-formylglutathione hydrolase frmB;      ...   228   3e-58
(A7ZX03) RecName: Full=S-formylglutathione hydrolase frmB;      ...   228   3e-58
BA000037_840(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, chr...   226   7e-58
CU928164_323(CU928164|pid:none) Escherichia coli IAI39 chromosom...   226   7e-58
CP001157_3746(CP001157|pid:none) Azotobacter vinelandii DJ, comp...   226   1e-57
CU928162_369(CU928162|pid:none) Escherichia coli ED1a chromosome...   225   2e-57
(Q0TKS8) RecName: Full=S-formylglutathione hydrolase frmB;      ...   225   2e-57
CP000758_140(CP000758|pid:none) Ochrobactrum anthropi ATCC 49188...   225   2e-57
CP000951_855(CP000951|pid:none) Synechococcus sp. PCC 7002, comp...   224   3e-57
FM180568_302(FM180568|pid:none) Escherichia coli 0127:H6 E2348/6...   224   3e-57
CP000950_2535(CP000950|pid:none) Yersinia pseudotuberculosis YPI...   224   4e-57
FM954973_1283(FM954973|pid:none) Vibrio splendidus LGP32 chromos...   224   4e-57
CP000514_255(CP000514|pid:none) Marinobacter aquaeolei VT8, comp...   224   4e-57
CP000076_1180(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c...   224   5e-57
CR378665_140(CR378665|pid:none) Photobacterium profundum SS9; se...   223   6e-57
AM286415_2680(AM286415|pid:none) Yersinia enterocolitica subsp. ...   223   8e-57
AM181176_1264(AM181176|pid:none) Pseudomonas fluorescens SBW25 c...   223   8e-57
CP000388_1815(CP000388|pid:none) Pseudoalteromonas atlantica T6c...   223   8e-57
CR382137_198(CR382137|pid:none) Debaryomyces hansenii strain CBS...   223   1e-56
CP000075_1367(CP000075|pid:none) Pseudomonas syringae pv. syring...   223   1e-56
AP007151_232(AP007151|pid:none) Aspergillus oryzae RIB40 genomic...   223   1e-56
BX842648_151(BX842648|pid:none) Bdellovibrio bacteriovorus compl...   222   1e-56
CP000127_1330(CP000127|pid:none) Nitrosococcus oceani ATCC 19707...   222   2e-56
CP000514_2223(CP000514|pid:none) Marinobacter aquaeolei VT8, com...   221   4e-56
AP004237_12(AP004237|pid:none) Proteus vulgaris plasmid Rts1 DNA...   220   5e-56
CP000830_473(CP000830|pid:none) Dinoroseobacter shibae DFL 12, c...   220   5e-56
FJ223607_14(FJ223607|pid:none) Klebsiella pneumoniae strain 9 pl...   220   5e-56
CP000961_374(CP000961|pid:none) Shewanella woodyi ATCC 51908, co...   220   7e-56
CP001192_526(CP001192|pid:none) Rhizobium leguminosarum bv. trif...   219   9e-56
CP000851_269(CP000851|pid:none) Shewanella pealeana ATCC 700345,...   219   9e-56
CP000826_1550(CP000826|pid:none) Serratia proteamaculans 568, co...   219   9e-56
CP000462_194(CP000462|pid:none) Aeromonas hydrophila subsp. hydr...   219   9e-56
CP000138_401(CP000138|pid:none) Rhizobium etli CFN 42 plasmid p4...   219   9e-56
CP000949_4032(CP000949|pid:none) Pseudomonas putida W619, comple...   219   9e-56
CP000680_3006(CP000680|pid:none) Pseudomonas mendocina ymp, comp...   219   9e-56
CP000497_456(CP000497|pid:none) Pichia stipitis CBS 6054 chromos...   219   2e-55
CP001077_583(CP001077|pid:none) Rhizobium etli CIAT 652 plasmid ...   219   2e-55
CP000510_3343(CP000510|pid:none) Psychromonas ingrahamii 37, com...   218   2e-55
CP000926_1163(CP000926|pid:none) Pseudomonas putida GB-1, comple...   218   2e-55
CP000644_3902(CP000644|pid:none) Aeromonas salmonicida subsp. sa...   218   2e-55
AM920427_582(AM920427|pid:none) Penicillium chrysogenum Wisconsi...   218   3e-55
CP001037_2061(CP001037|pid:none) Nostoc punctiforme PCC 73102, c...   218   3e-55
CP000447_3398(CP000447|pid:none) Shewanella frigidimarina NCIMB ...   218   3e-55
AE014133_106(AE014133|pid:none) Streptococcus mutans UA159, comp...   217   4e-55
AY639878_1(AY639878|pid:none) Sterkiella histriomuscorum formald...   217   4e-55
AM236086_520(AM236086|pid:none) Rhizobium leguminosarum bv. vici...   217   4e-55
CP001344_550(CP001344|pid:none) Cyanothece sp. PCC 7425, complet...   216   8e-55
AE017340_1762(AE017340|pid:none) Idiomarina loihiensis L2TR, com...   216   8e-55
AE015451_1604(AE015451|pid:none) Pseudomonas putida KT2440 compl...   216   8e-55
CP000931_3996(CP000931|pid:none) Shewanella halifaxensis HAW-EB4...   216   1e-54
AE017353_172(AE017353|pid:none) Cryptococcus neoformans var. neo...   216   1e-54
AL591688_1396(AL591688|pid:none) Sinorhizobium meliloti 1021 com...   216   1e-54
CP000103_2256(CP000103|pid:none) Nitrosospira multiformis ATCC 2...   216   1e-54
CP001103_3599(CP001103|pid:none) Alteromonas macleodii 'Deep eco...   216   1e-54
CP000746_65(CP000746|pid:none) Actinobacillus succinogenes 130Z,...   215   2e-54
CP000744_1499(CP000744|pid:none) Pseudomonas aeruginosa PA7, com...   215   2e-54
A97539(A97539) MGC1873 protein homolog AGR_C_2723 (BC001169) [im...   215   2e-54
AE014300_138(AE014300|pid:none) Shewanella oneidensis MR-1 megap...   215   2e-54
CP000440_2641(CP000440|pid:none) Burkholderia ambifaria AMMD chr...   215   2e-54
BX950851_2691(BX950851|pid:none) Erwinia carotovora subsp. atros...   214   3e-54
CP001025_2498(CP001025|pid:none) Burkholderia ambifaria MC40-6 c...   214   3e-54
CP001154_2366(CP001154|pid:none) Laribacter hongkongensis HLHK9,...   213   8e-54
CR954246_1346(CR954246|pid:none) Pseudoalteromonas haloplanktis ...   213   1e-53
AM743169_3757(AM743169|pid:none) Stenotrophomonas maltophilia K2...   212   1e-53
AM747720_2811(AM747720|pid:none) Burkholderia cenocepacia J2315 ...   212   1e-53
CP000376_415(CP000376|pid:none) Silicibacter sp. TM1040 mega pla...   212   2e-53
CP000633_1834(CP000633|pid:none) Agrobacterium vitis S4 chromoso...   212   2e-53
CP001179_192(CP001179|pid:none) Bacillus cereus AH187 plasmid pA...   211   2e-53
A83191(A83191) probable esterase PA3628 [imported] - Pseudomonas...   211   2e-53
CP001616_2836(CP001616|pid:none) Tolumonas auensis DSM 9187, com...   211   2e-53
CP000438_1381(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA...   211   2e-53
AP008231_1060(AP008231|pid:none) Synechococcus elongatus PCC 630...   211   4e-53
CP001389_1203(CP001389|pid:none) Rhizobium sp. NGR234, complete ...   211   4e-53
CP000362_819(CP000362|pid:none) Roseobacter denitrificans OCh 11...   210   5e-53
CP000086_683(CP000086|pid:none) Burkholderia thailandensis E264 ...   210   5e-53
CU928163_2449(CU928163|pid:none) Escherichia coli UMN026 chromos...   210   7e-53
FM180568_2300(FM180568|pid:none) Escherichia coli 0127:H6 E2348/...   210   7e-53
(Q8X635) RecName: Full=S-formylglutathione hydrolase yeiG;      ...   210   7e-53
BX640436_65(BX640436|pid:none) Bordetella parapertussis strain 1...   209   9e-53
AY658715_1(AY658715|pid:none) Synthetic construct Peudomonas aer...   209   9e-53
(Q0T2X0) RecName: Full=S-formylglutathione hydrolase yeiG;      ...   209   9e-53
(Q0TFT6) RecName: Full=S-formylglutathione hydrolase yeiG;      ...   209   9e-53
(B1LKQ1) RecName: Full=S-formylglutathione hydrolase yeiG;      ...   209   1e-52
(A7ZNX7) RecName: Full=S-formylglutathione hydrolase yeiG;      ...   209   1e-52
AP008232_956(AP008232|pid:none) Sodalis glossinidius str. 'morsi...   208   3e-52
CP000031_3744(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple...   208   3e-52
AE008922_3338(AE008922|pid:none) Xanthomonas campestris pv. camp...   208   3e-52
BX571965_829(BX571965|pid:none) Burkholderia pseudomallei strain...   208   3e-52
CP001408_786(CP001408|pid:none) Burkholderia pseudomallei MSHR34...   207   4e-52
FM200053_640(FM200053|pid:none) Salmonella enterica subsp. enter...   207   5e-52
CP000362_302(CP000362|pid:none) Roseobacter denitrificans OCh 11...   207   5e-52
AE005673_2498(AE005673|pid:none) Caulobacter crescentus CB15, co...   207   6e-52
CP000010_284(CP000010|pid:none) Burkholderia mallei ATCC 23344 c...   206   8e-52
(Q32EQ3) RecName: Full=S-formylglutathione hydrolase yeiG;      ...   206   8e-52
CU459140_22(CU459140|pid:none) Acinetobacter baumannii str. AYE ...   206   8e-52
CP001503_2809(CP001503|pid:none) Burkholderia glumae BGR1 chromo...   206   1e-51
CP000158_550(CP000158|pid:none) Hyphomonas neptunium ATCC 15444,...   206   1e-51
CP000647_2549(CP000647|pid:none) Klebsiella pneumoniae subsp. pn...   205   2e-51
CP000886_798(CP000886|pid:none) Salmonella enterica subsp. enter...   205   2e-51
CP001144_2321(CP001144|pid:none) Salmonella enterica subsp. ente...   205   2e-51
CP000026_617(CP000026|pid:none) Salmonella enterica subsp. enter...   205   2e-51
CU928161_2211(CU928161|pid:none) Escherichia coli S88 chromosome...   204   3e-51
CP001127_2274(CP001127|pid:none) Salmonella enterica subsp. ente...   204   3e-51
CU633750_1081(CU633750|pid:none) Cupriavidus taiwanensis str. LM...   204   4e-51
CP000857_1470(CP000857|pid:none) Salmonella enterica subsp. ente...   204   4e-51
CP000521_733(CP000521|pid:none) Acinetobacter baumannii ATCC 179...   204   4e-51
CP001053_244(CP001053|pid:none) Burkholderia phytofirmans PsJN c...   204   4e-51
CP000671_418(CP000671|pid:none) Haemophilus influenzae PittEE, c...   204   4e-51
CP000738_1014(CP000738|pid:none) Sinorhizobium medicae WSM419, c...   204   4e-51
CP001111_3379(CP001111|pid:none) Stenotrophomonas maltophilia R5...   204   5e-51
EU352851_1(EU352851|pid:none) Uncultured bacterium clone pSubBAC...   204   5e-51
FM992695_840(FM992695|pid:none) Candida dubliniensis CD36 chromo...   203   9e-51
CP000057_239(CP000057|pid:none) Haemophilus influenzae 86-028NP,...   202   1e-50
CP000270_3682(CP000270|pid:none) Burkholderia xenovorans LB400 c...   202   1e-50
CP001052_3190(CP001052|pid:none) Burkholderia phytofirmans PsJN ...   202   1e-50
BA000022_585(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA, ...   202   1e-50
CP000863_647(CP000863|pid:none) Acinetobacter baumannii ACICU, c...   202   1e-50
AF035558_1(AF035558|pid:none) Anabaena azollae S-formylglutathio...   202   1e-50
CP000927_3504(CP000927|pid:none) Caulobacter sp. K31, complete g...   202   2e-50
AB104827_1(AB104827|pid:none) Candida boidinii FGH1 gene for S-f...   202   2e-50
DQ423203_2(DQ423203|pid:none) Haemophilus influenzae strain 11P6...   202   2e-50
CP000964_1541(CP000964|pid:none) Klebsiella pneumoniae 342, comp...   201   3e-50
CP000269_220(CP000269|pid:none) Janthinobacterium sp. Marseille,...   201   3e-50
CP000628_1888(CP000628|pid:none) Agrobacterium radiobacter K84 c...   201   3e-50
AE002098_1249(AE002098|pid:none) Neisseria meningitidis MC58, co...   201   3e-50
CP000155_1384(CP000155|pid:none) Hahella chejuensis KCTC 2396, c...   201   4e-50
AE016795_327(AE016795|pid:none) Vibrio vulnificus CMCP6 chromoso...   201   4e-50
CP000884_2404(CP000884|pid:none) Delftia acidovorans SPH-1, comp...   201   4e-50
AL157959_1337(AL157959|pid:none) Neisseria meningitidis serogrou...   200   6e-50
CP001150_2222(CP001150|pid:none) Rhodobacter sphaeroides KD131 c...   200   6e-50
AM902716_156(AM902716|pid:none) Bordetella petrii strain DSM 128...   200   7e-50
CP000542_3935(CP000542|pid:none) Verminephrobacter eiseniae EF01...   200   7e-50
CT573326_2417(CT573326|pid:none) Pseudomonas entomophila str. L4...   200   7e-50
CR555306_3243(CR555306|pid:none) Azoarcus sp. EbN1 complete geno...   199   1e-49
AM039952_790(AM039952|pid:none) Xanthomonas campestris pv. vesic...   199   1e-49
CP000577_2493(CP000577|pid:none) Rhodobacter sphaeroides ATCC 17...   199   1e-49
AM421808_1150(AM421808|pid:none) Neisseria meningitidis serogrou...   199   2e-49
CP001063_242(CP001063|pid:none) Shigella boydii CDC 3083-94, com...   198   2e-49
AM260480_1179(AM260480|pid:none) Ralstonia eutropha H16 chromoso...   198   2e-49
AB472089_1(AB472089|pid:none) Pichia pastoris FGH1 gene for S-fo...   197   4e-49
AY665723_11(AY665723|pid:none) Acinetobacter baumannii strain MA...   197   5e-49
CP001052_94(CP001052|pid:none) Burkholderia phytofirmans PsJN ch...   197   6e-49
CP000157_2280(CP000157|pid:none) Erythrobacter litoralis HTCC259...   197   6e-49
CP000783_1042(CP000783|pid:none) Enterobacter sakazakii ATCC BAA...   197   6e-49
CU861906_620(CU861906|pid:none) Ralstonia solanacearum strain Mo...   196   1e-48
CP000264_52(CP000264|pid:none) Jannaschia sp. CCS1, complete gen...   196   1e-48
CP000269_1171(CP000269|pid:none) Janthinobacterium sp. Marseille...   196   1e-48
CR543861_610(CR543861|pid:none) Acinetobacter sp. ADP1 complete ...   195   2e-48
CP000449_804(CP000449|pid:none) Maricaulis maris MCS10, complete...   195   2e-48
AE014291_125(AE014291|pid:none) Brucella suis 1330 chromosome I,...   195   2e-48
CP001324_81(CP001324|pid:none) Micromonas sp. RCC299 chromosome ...   194   3e-48
AL646052_604(AL646052|pid:none) Ralstonia solanacearum GMI1000 c...   194   4e-48
C95863(C95863)probable S-formylglutathione hydrolase (EC 3.1.2.1...   194   5e-48
CP001050_1318(CP001050|pid:none) Neisseria gonorrhoeae NCCP11945...   192   1e-47
CP000113_6920(CP000113|pid:none) Myxococcus xanthus DK 1622, com...   192   2e-47
U34346_6(U34346|pid:none) Paracoccus denitrificans NAD-GSH-depen...   192   2e-47
CP000594_123(CP000594|pid:none) Ostreococcus lucimarinus CCE9901...   191   3e-47
CU633900_956(CU633900|pid:none) Podospora anserina genomic DNA c...   191   3e-47
CP000539_2686(CP000539|pid:none) Acidovorax sp. JS42, complete g...   189   1e-46
CP001392_2240(CP001392|pid:none) Diaphorobacter sp. TPSY, comple...   188   2e-46
DQ889677_136(DQ889677|pid:none) Bacillus cereus strain AH820 pla...   187   6e-46
CU928179_873(CU928179|pid:none) Zygosaccharomyces rouxii strain ...   183   7e-45
CP000228_179(CP000228|pid:none) Bacillus cereus Q1 plasmid pBc23...   182   1e-44
BA000040_6186(BA000040|pid:none) Bradyrhizobium japonicum USDA 1...   182   1e-44
CU234118_5163(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl...   181   3e-44
CP000463_4639(CP000463|pid:none) Rhodopseudomonas palustris BisA...   181   4e-44
CP000774_2438(CP000774|pid:none) Parvibaculum lavamentivorans DS...   180   8e-44
CP000082_1717(CP000082|pid:none) Psychrobacter arcticus 273-4, c...   179   1e-43
CP000699_1170(CP000699|pid:none) Sphingomonas wittichii RW1, com...   179   2e-43
CP000248_2908(CP000248|pid:none) Novosphingobium aromaticivorans...   179   2e-43
AM889285_1853(AM889285|pid:none) Gluconacetobacter diazotrophicu...   179   2e-43
CP000512_2154(CP000512|pid:none) Acidovorax citrulli AAC00-1, co...   179   2e-43
CP001219_671(CP001219|pid:none) Acidithiobacillus ferrooxidans A...   177   4e-43
AE006468_2134(AE006468|pid:none) Salmonella enterica subsp. ente...   177   4e-43
CP000009_1956(CP000009|pid:none) Gluconobacter oxydans 621H, com...   176   9e-43
CP000381_1164(CP000381|pid:none) Neisseria meningitidis 053442, ...   176   1e-42
CP000301_99(CP000301|pid:none) Rhodopseudomonas palustris BisB18...   176   1e-42
CP000435_1428(CP000435|pid:none) Synechococcus sp. CC9311, compl...   176   1e-42
CP001013_3238(CP001013|pid:none) Leptothrix cholodnii SP-6, comp...   176   1e-42
AE004969_556(AE004969|pid:none) Neisseria gonorrhoeae FA 1090, c...   176   1e-42
CP001132_834(CP001132|pid:none) Acidithiobacillus ferrooxidans A...   173   1e-41
AE016818_191(AE016818|pid:none) Ashbya gossypii (= Eremothecium ...   168   2e-40
BT083221_1(BT083221|pid:none) Anoplopoma fimbria clone afim-evh-...   157   4e-37
CR380956_218(CR380956|pid:none) Candida glabrata strain CBS138 c...   155   2e-36
CR378679_314(CR378679|pid:none) Photobacterium profundum SS9 chr...   149   1e-34
AY190962_1(AY190962|pid:none) Drosophila willistoni clone DWIF01...   144   4e-33
AF227624_1(AF227624|pid:none) Euphorbia esula putative esterase ...   110   6e-23
AB277723_8(AB277723|pid:none) Photobacterium damselae subsp. pis...   108   4e-22
AK111469_1(AK111469|pid:none) Oryza sativa Japonica Group cDNA c...    96   3e-18
EF043303_1(EF043303|pid:none) Eschrichtius robustus esterase D (...    67   1e-09
EU874395_1(EU874395|pid:none) Uncultured bacterium clone CHA3 es...    55   3e-06
AP009380_1542(AP009380|pid:none) Porphyromonas gingivalis ATCC 3...    51   5e-05
AM180252_479(AM180252|pid:none) Lawsonia intracellularis PHE/MN1...    51   7e-05
AP009351_2538(AP009351|pid:none) Staphylococcus aureus subsp. au...    49   3e-04
AE015924_367(AE015924|pid:none) Porphyromonas gingivalis W83, co...    48   6e-04
AP009324_2614(AP009324|pid:none) Staphylococcus aureus subsp. au...    47   0.001
AJ938182_2503(AJ938182|pid:none) Staphylococcus aureus RF122 com...    47   0.001
EF043304_1(EF043304|pid:none) Megaptera novaeangliae esterase D ...    45   0.003
CT573213_3207(CT573213|pid:none) Frankia alni str. ACN14A chromo...    45   0.003
EF026109_1(EF026109|pid:none) Leptinotarsa decemlineata putative...    45   0.004
EF026110_1(EF026110|pid:none) Leptinotarsa decemlineata putative...    45   0.004
AE015929_2213(AE015929|pid:none) Staphylococcus epidermidis ATCC...    45   0.005
CP000139_2412(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,...    44   0.007
CP000029_2196(CP000029|pid:none) Staphylococcus epidermidis RP62...    43   0.015
AM180355_2275(AM180355|pid:none) Clostridium difficile 630 compl...    42   0.033
CP000685_4771(CP000685|pid:none) Flavobacterium johnsoniae UW101...    42   0.043
AL939128_130(AL939128|pid:none) Streptomyces coelicolor A3(2) co...    41   0.074
AF059739_1(AF059739|pid:none) Lactococcus lactis subsp. cremoris...    41   0.074
AF052509_1(AF052509|pid:none) Homo sapiens esterase D gene, part...    40   0.097
EF043305_1(EF043305|pid:none) Balaenoptera bonaerensis esterase ...    40   0.097
CP000685_2330(CP000685|pid:none) Flavobacterium johnsoniae UW101...    40   0.097
CP000248_1635(CP000248|pid:none) Novosphingobium aromaticivorans...    40   0.13
CR378679_316(CR378679|pid:none) Photobacterium profundum SS9 chr...    40   0.13
AP006618_567(AP006618|pid:none) Nocardia farcinica IFM 10152 DNA...    40   0.17
CP001099_1125(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,...    40   0.17
CP000423_2013(CP000423|pid:none) Lactobacillus casei ATCC 334, c...    39   0.28
AF405559_1(AF405559|pid:none) Lactococcus lactis subsp. cremoris...    39   0.28
AF350244_2(AF350244|pid:none) Lactococcus lactis strain NCDO763 ...    39   0.37
CP000931_784(CP000931|pid:none) Shewanella halifaxensis HAW-EB4,...    39   0.37
CP000903_3406(CP000903|pid:none) Bacillus weihenstephanensis KBA...    39   0.37
CP000851_730(CP000851|pid:none) Shewanella pealeana ATCC 700345,...    39   0.37
CP000884_2647(CP000884|pid:none) Delftia acidovorans SPH-1, comp...    38   0.48
CP000361_707(CP000361|pid:none) Arcobacter butzleri RM4018, comp...    38   0.63
CP000230_297(CP000230|pid:none) Rhodospirillum rubrum ATCC 11170...    38   0.63
CP001177_3602(CP001177|pid:none) Bacillus cereus AH187, complete...    38   0.63
CP001097_1062(CP001097|pid:none) Chlorobium limicola DSM 245, co...    38   0.63
CP001053_1862(CP001053|pid:none) Burkholderia phytofirmans PsJN ...    37   0.82
CP001157_1832(CP001157|pid:none) Azotobacter vinelandii DJ, comp...    37   0.82
AB091396_1(AB091396|pid:none) Abiotrophia para-adiacens XynC gen...    37   0.82
CP001283_3655(CP001283|pid:none) Bacillus cereus AH820, complete...    37   1.1
CP000001_3454(CP000001|pid:none) Bacillus cereus E33L, complete ...    37   1.1
CP000227_3428(CP000227|pid:none) Bacillus cereus Q1, complete ge...    37   1.1
EU232058_1(EU232058|pid:none) Lactobacillus rhamnosus HN001 clon...    37   1.1
AE016879_3541(AE016879|pid:none) Bacillus anthracis str. Ames, c...    37   1.1
CP001407_3654(CP001407|pid:none) Bacillus cereus 03BB102, comple...    37   1.4
AE017355_3439(AE017355|pid:none) Bacillus thuringiensis serovar ...    37   1.4
AL935262_102(AL935262|pid:none) Lactobacillus plantarum strain W...    37   1.4
CP001291_3216(CP001291|pid:none) Cyanothece sp. PCC 7424, comple...    37   1.4
AE016877_3550(AE016877|pid:none) Bacillus cereus ATCC 14579, com...    37   1.4
CP000764_2267(CP000764|pid:none) Bacillus cereus subsp. cytotoxi...    37   1.4
CP000685_2615(CP000685|pid:none) Flavobacterium johnsoniae UW101...    36   1.8
AB274730_4(AB274730|pid:none) Paenibacillus sp. W-61 genes for p...    36   1.8
AB244518_2(AB244518|pid:none) Paenibacillus sp. W-61 orf1, orf2,...    36   1.8
CP001103_3793(CP001103|pid:none) Alteromonas macleodii 'Deep eco...    36   1.8
AP009153_3068(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN...    36   1.8
CR931997_133(CR931997|pid:none) Corynebacterium jeikeium K411 co...    36   1.8
CP000678_149(CP000678|pid:none) Methanobrevibacter smithii ATCC ...    36   2.4
CP000472_4146(CP000472|pid:none) Shewanella piezotolerans WP3, c...    36   2.4
FJ483470_1(FJ483470|pid:none) Uncultured bacterium clone FLS18 l...    35   3.1
BA000022_1435(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,...    35   3.1
BX842651_224(BX842651|pid:none) Bdellovibrio bacteriovorus compl...    35   4.1
AP006618_185(AP006618|pid:none) Nocardia farcinica IFM 10152 DNA...    35   4.1
AM420293_3823(AM420293|pid:none) Saccharopolyspora erythraea NRR...    35   4.1
CP000411_1407(CP000411|pid:none) Oenococcus oeni PSU-1, complete...    35   4.1
FB850039_1(FB850039|pid:none) Sequence 69312 from Patent WO20080...    35   5.3
CR954246_91(CR954246|pid:none) Pseudoalteromonas haloplanktis st...    35   5.3
CP001172_1130(CP001172|pid:none) Acinetobacter baumannii AB307-0...    35   5.3
CP000029_2302(CP000029|pid:none) Staphylococcus epidermidis RP62...    35   5.3
CP000863_2476(CP000863|pid:none) Acinetobacter baumannii ACICU, ...    35   5.3
CU459141_1136(CU459141|pid:none) Acinetobacter baumannii str. AY...    35   5.3
CP000879_1790(CP000879|pid:none) Petrotoga mobilis SJ95, complet...    35   5.3
CP001404_357(CP001404|pid:none) Sulfolobus islandicus Y.N.15.51,...    35   5.3
CP000387_2042(CP000387|pid:none) Streptococcus sanguinis SK36, c...    35   5.3
CP000813_178(CP000813|pid:none) Bacillus pumilus SAFR-032, compl...    35   5.3
CP001104_111(CP001104|pid:none) Eubacterium eligens ATCC 27750, ...    34   6.9
CP001581_308(CP001581|pid:none) Clostridium botulinum A2 str. Ky...    34   6.9
AE017333_3726(AE017333|pid:none) Bacillus licheniformis DSM 13, ...    34   6.9
AP008957_1467(AP008957|pid:none) Rhodococcus erythropolis PR4 DN...    34   9.1
CP000271_909(CP000271|pid:none) Burkholderia xenovorans LB400 ch...    34   9.1
AM711867_1534(AM711867|pid:none) Clavibacter michiganensis subsp...    34   9.1
AE016879_883(AE016879|pid:none) Bacillus anthracis str. Ames, co...    34   9.1
CP000875_3246(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ...    34   9.1
AM286690_1707(AM286690|pid:none) Alcanivorax borkumensis SK2, co...    34   9.1
AC123570_18(AC123570|pid:none) Medicago truncatula clone mth2-33...    34   9.1

>(P10768) RecName: Full=S-formylglutathione hydrolase;
           Short=FGH;          EC=3.1.2.12; AltName: Full=Esterase
           D;  &AF112219_1(AF112219|pid:none)
           &AL136958_2(AL136958|pid:none)
          Length = 282

 Score =  258 bits (660), Expect = 2e-67
 Identities = 130/277 (46%), Positives = 186/277 (67%), Gaps = 3/277 (1%)
 Frame = +1

Query: 43  LSKSKSFNGEVRRYSHKSTSLSCDMKFHVYVPSKSSTPSS-VLWFLSGLTCTDENFIQKS 219
           +S +K F G  + + H S  L+C MKF VY+P K+ T     L++LSGLTCT++NFI KS
Sbjct: 6   ISSNKCFGGLQKVFEHDSVELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQNFISKS 65

Query: 220 GAIQYASQNNIFLVCPDTSPRGITIENAEDKWQGPGFGAGYYLNSTTDKYKAHFQMFTYI 399
           G  Q AS++ + ++ PDTSPRG  I+  ++ W   G GAG+Y+++T D +K +++M++Y+
Sbjct: 66  GYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDF-GTGAGFYVDATEDPWKTNYRMYSYV 124

Query: 400 TKELFELINKEFTDTININKHSIFGHSMGGLGAISLFIKTNGQYKSVSAFSPISNPVNCD 579
           T+EL +LIN  F   ++  + SIFGHSMGG GA+   +K  G+YKSVSAF+PI NPV C
Sbjct: 125 TEELPQLINANFP--VDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCP 182

Query: 580 WSLHSFKEYLGTENKEAWLQYDPCHLLKNYDGKPFDLLVDQGSADEFFND--LKFDNLEL 753
           W   +F  YLGT+  + W  YD  HL+K+Y G   D+L+DQG  D+F  D  L  DN
Sbjct: 183 WGKKAFSGYLGTDQSK-WKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIA 241

Query: 754 ACKENSKINLIARLQDGYNHGYFYISTFIKDHIEYHS 864
           AC E  KI ++ RLQ+GY+H Y++I+TFI DHI +H+
Sbjct: 242 ACTE-KKIPVVFRLQEGYDHSYYFIATFITDHIRHHA 277

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,382,379,281
Number of extensions: 25877307
Number of successful extensions: 72467
Number of sequences better than 10.0: 307
Number of HSP's gapped: 71378
Number of HSP's successfully gapped: 307
Length of query: 335
Length of database: 1,040,966,779
Length adjustment: 129
Effective length of query: 206
Effective length of database: 627,614,014
Effective search space: 129288486884
Effective search space used: 129288486884
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.86  gvh: 0.56  alm: 0.39  top: 0.63  tms: 0.00  mit: 0.35  mip: 0.04
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 32.0 %: mitochondrial
	 28.0 %: nuclear
	 24.0 %: cytoplasmic
	  4.0 %: cytoskeletal
	  4.0 %: extracellular, including cell wall
	  4.0 %: endoplasmic reticulum
	  4.0 %: peroxisomal

>> prediction for Contig-U10123-1 is mit
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 2
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 1
FC-IC (SUB) 1