| Contig-U10060-1 |
| Contig ID |
Contig-U10060-1 |
| Contig update |
2002. 9.13 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
1302 |
| Chromosome number (1..6, M) |
- |
| Chromosome length |
- |
| Start point |
- |
| End point |
- |
| Strand (PLUS/MINUS) |
- |
| Number of clones |
3 |
| Number of EST |
5 |
| Link to clone list |
U10060 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.18 |
| Homology vs DNA |
Query= Contig-U10060-1 (Contig-U10060-1Q) /CSM_Contig/Contig-U10060-1Q.Seq.d
(1302 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ398506) Dictyostelium discoideum cDNA clone:dds12o16, 3' ... 1376 0.0 1
(BJ346737) Dictyostelium discoideum cDNA clone:dda24j21, 3' ... 1346 0.0 1
(BJ347082) Dictyostelium discoideum cDNA clone:dda26f01, 3' ... 1304 0.0 1
(BJ433938) Dictyostelium discoideum cDNA clone:ddv23l07, 3' ... 1094 0.0 1
(BJ374316) Dictyostelium discoideum cDNA clone:ddc7p05, 3' e... 1082 0.0 1
(BJ329408) Dictyostelium discoideum cDNA clone:dda24j21, 5' ... 753 0.0 4
(BJ387182) Dictyostelium discoideum cDNA clone:dds12o16, 5' ... 777 0.0 3
(BJ360661) Dictyostelium discoideum cDNA clone:ddc7p05, 5' e... 741 0.0 3
(BJ415694) Dictyostelium discoideum cDNA clone:ddv23l07, 5' ... 761 0.0 3
(BJ329721) Dictyostelium discoideum cDNA clone:dda26f01, 5' ... 367 e-129 3
(AY463097) Plasmodium falciparum histone acetyltransferase (... 46 2e-09 4
(AY498855) Plasmodium falciparum histone acetyltransferase m... 46 4e-09 4
(AY459293) Plasmodium falciparum histone acetyltransferase (... 40 1e-07 4
(DC233714) Plasmodium berghei strain ANKA cDNA clone:SG02848... 52 1e-06 2
(EC390533) E01_E01nb3c1_pDNR-f_449418 Myzus persicae, tobacc... 40 3e-04 3
(AW874991) 00112 leafy spurge Lambda HybriZAP 2.1 two-hybrid... 42 0.003 2
(EJ266059) 1095351012631 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.005 2
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 34 0.007 11
(CR380952) Candida glabrata strain CBS138 chromosome F compl... 54 0.014 1
(BZ293837) CG0548.r1 Candida glabrata Random Genomic Library... 54 0.014 1
(AM837089) Nicotiana tabacum EST, clone nt005198017. 54 0.014 1
(AM835614) Nicotiana tabacum EST, clone nt005154087. 54 0.014 1
(AE014838) Plasmodium falciparum 3D7 chromosome 11 section 3... 36 0.037 8
(CR936948) Medicago truncatula chromosome 5 clone mth2-29e9,... 42 0.046 6
(AM673746) Entamoeba terrapinae GSS, clone terra255f08.p1k. 52 0.054 1
(AM673723) Entamoeba terrapinae GSS, clone terra255d04.p1k. 52 0.054 1
(DC223459) Plasmodium berghei strain ANKA cDNA clone:MZ00746... 52 0.054 1
(AC106412) Rattus norvegicus clone CH230-83D7, *** SEQUENCIN... 36 0.056 8
(AL844507) Plasmodium falciparum chromosome 8. 40 0.11 18
(AC196754) Citrus sinensis clone CSRBBa-032P20, WORKING DRAF... 36 0.12 2
(AC196761) Citrus sinensis clone CSRBBa-042G02, WORKING DRAF... 36 0.13 2
(AC196744) Citrus sinensis clone CSRBBa-010A16, WORKING DRAF... 36 0.13 2
(AF079445) Dictyostelium discoideum TipC (tipC) gene, comple... 40 0.14 4
(AC079631) Homo sapiens 12 BAC RP11-389G16 (Roswell Park Can... 38 0.15 7
(DY268656) IC0AAA24DC02RM2 CitNFL Citrus clementina cDNA 5',... 36 0.16 2
(DY269310) IC0AAA26CD08RM1 CitNFL Citrus clementina cDNA 5',... 36 0.16 2
(EY806035) CR05-C3-702-069-G02-CT.F Mandarin fruit, developm... 36 0.16 2
(BQ624515) USDA-FP_01606 Ridge pineapple sweet orange entire... 36 0.16 2
(DD391816) Method and nucleic acids for the improved treatme... 42 0.23 2
(DD209173) test. 42 0.23 2
(DD061412) Methods and nucleic acids for the analysis of he... 42 0.23 2
(CS250583) Sequence 127 from Patent WO2005123945. 42 0.23 2
(CQ807072) Sequence 522 from Patent WO2004035803. 42 0.23 2
(AX826010) Sequence 262 from Patent WO03072821. 42 0.23 2
(AX822370) Sequence 262 from Patent EP1340818. 42 0.23 2
(AX795850) Sequence 193 from Patent WO03052135. 42 0.23 2
(AX767490) Sequence 138 from Patent WO03044226. 42 0.23 2
(AX598974) Sequence 314 from Patent WO02077272. 42 0.23 2
(CU207383) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 0.24 9
(AC096653) Homo sapiens BAC clone RP11-16P17 from 4, complet... 42 0.28 4
(DJ130433) Method for identification of useful proteins deri... 46 0.41 2
(EI350466) GM_WBc0098M06.f GM_WBc Glycine max genomic clone ... 36 0.41 3
(ER468110) 1092963934709 Global-Ocean-Sampling_GS-35-01-01-1... 34 0.43 3
(CS374425) Sequence 528 from Patent WO2006034879. 42 0.44 2
(AC099017) Drosophila melanogaster, chromosome 2L, region 37... 44 0.63 4
(DX986467) CHORI103-5K21.TJ CHORI103 Schistosoma mansoni gen... 34 0.69 3
(AC168359) Strongylocentrotus purpuratus clone R3-4013O21, W... 38 0.77 3
(CP000716) Thermosipho melanesiensis BI429, complete genome. 40 0.80 19
(BX276098) Zebrafish DNA sequence from clone CH211-13I4 in l... 48 0.84 1
(AC221492) Bos taurus clone CH240-409O2, WORKING DRAFT SEQUE... 48 0.84 1
(AC220730) Bos taurus clone CH240-348E19, WORKING DRAFT SEQU... 48 0.84 1
(AC219792) Bos taurus clone CH240-321M13, WORKING DRAFT SEQU... 48 0.84 1
(AC165932) Bos taurus clone CH240-165I3, WORKING DRAFT SEQUE... 48 0.84 1
(ER938769) AF__Bb0029A08r AF__Bb Aquilegia formosa genomic, ... 48 0.84 1
(AL409535) T3 end of clone AV0AA015E03 of library AV0AA from... 48 0.84 1
(AP009552) Microcystis aeruginosa NIES-843 DNA, complete gen... 48 0.84 1
(AY779021) Entamoeba histolytica putative GCN5 gene, complet... 46 0.89 2
(BS000216) Pan troglodytes chromosome 22 clone:RP43-057N15, ... 34 0.90 8
(AC092939) Homo sapiens 3 BAC RP11-791G22 (Roswell Park Canc... 38 0.99 5
(DJ335362) CELL CYCLE GENES AND RELATED METHODS OF USING. 36 1.1 3
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 38 1.2 4
(AC005754) Homo sapiens chromosome 5, BAC clone 34j15 (LBNL ... 36 1.3 5
(CR352245) Zebrafish DNA sequence from clone DKEY-153L11 in ... 36 1.3 6
(AC198558) Callicebus moloch clone LB5-365K17, WORKING DRAFT... 34 1.3 6
(AC123642) Mus musculus chromosome 7 clone RP23-77C5 map 7, ... 36 1.4 7
(AC160240) Rhinolophus ferrumequinum clone VMRC7-88J4, WORKI... 38 1.4 5
(AC192309) Atelerix albiventris clone LB4-207C23, WORKING DR... 32 1.7 2
(U95973) Arabidopsis thaliana chromosome 1 BAC T19D16 genomi... 40 1.7 2
(EC207107) 47796 CK01 Drosophila melanogaster cDNA clone CK0... 38 1.7 2
(CO344661) EP19701.3prime Exelixis FlyTag CK02 pCDNA-SK+ Dro... 38 1.8 2
(AC115680) Dictyostelium discoideum chromosome 2 map 4915084... 40 1.8 2
(AC171477) Bos taurus clone CH240-263L20, WORKING DRAFT SEQU... 38 1.8 8
(EC241466) 72899 CK01 Drosophila melanogaster cDNA clone CK0... 38 1.8 2
(CO286841) EK064034.5prime Exelixis FlyTag CK01 pCDNA-SK+ Dr... 38 1.9 2
(AC093301) Homo sapiens chromosome 5 clone RP11-565F4, compl... 36 1.9 10
(EC259879) 480271 CK02 Drosophila melanogaster cDNA clone 21... 38 1.9 2
(AC097903) Rattus norvegicus clone CH230-146J6, *** SEQUENCI... 40 1.9 5
(AC090249) Homo sapiens chromosome 18 clone RP11-879H3 map 1... 38 2.0 6
(AM464295) Vitis vinifera contig VV78X042498.10, whole genom... 34 2.0 2
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 34 2.1 10
(EC211826) 305359 CK01 Drosophila melanogaster cDNA clone 61... 38 2.1 2
(AR553571) Sequence 8702 from patent US 6747137. 38 2.2 2
(CO302908) EK185133.5prime Exelixis FlyTag CK01 pCDNA-SK+ Dr... 38 2.2 2
(BH155517) ENTQY39TR Entamoeba histolytica Sheared DNA Entam... 34 2.2 2
(FH541696) CHO_OF4767xl14f1.ab1 CHO_OF4 Nicotiana tabacum ge... 32 2.2 2
(DY589439) GUTF031293C11 POSSUM_01-POSSUM-GUT-2KB Trichosuru... 36 2.2 2
(FH360921) CHO_OF4690xl10f1.ab1 CHO_OF4 Nicotiana tabacum ge... 32 2.3 2
(ES751825) C20L_1_H04_E002.g1 USDA-Tifton Peanut Library C20... 38 2.3 2
(CO321391) EK185605.5prime Exelixis FlyTag CK01 pCDNA-SK+ Dr... 38 2.3 2
(AC178986) Strongylocentrotus purpuratus clone R3-3122I9, WO... 34 2.3 8
>(BJ398506) Dictyostelium discoideum cDNA clone:dds12o16, 3' end,
single read.
Length = 766
Score = 1376 bits (694), Expect = 0.0
Identities = 694/694 (100%)
Strand = Plus / Minus
Query: 538 ggttcattcctaatgactcatttaaaagaacataatagaaaagttggaatttaccatttc 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 ggttcattcctaatgactcatttaaaagaacataatagaaaagttggaatttaccatttc 707
Query: 598 ctaacgtttgcagataactttgcaattgaatattttcaaaaacaaggattcactcatgat 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 ctaacgtttgcagataactttgcaattgaatattttcaaaaacaaggattcactcatgat 647
Query: 658 ataacattgctaaaagagaaatggaaaggtttcatccaagagtatgatggtggttcatta 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ataacattgctaaaagagaaatggaaaggtttcatccaagagtatgatggtggttcatta 587
Query: 718 atggagtgtgttgtacacccaaatgtaacctatttagatataccgactatggtaaaagcg 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 atggagtgtgttgtacacccaaatgtaacctatttagatataccgactatggtaaaagcg 527
Query: 778 cagagaaatgcattgaatgaaaagattcgtactattagtacctcacatttagtttattca 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 cagagaaatgcattgaatgaaaagattcgtactattagtacctcacatttagtttattca 467
Query: 838 ggtttacaatgttttaattatggtcaaagacgcatacccattgaaaagatacctggtata 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ggtttacaatgttttaattatggtcaaagacgcatacccattgaaaagatacctggtata 407
Query: 898 ttagaagctggttggattaataatgttggaaatgttgatcaacaacaacaacaaataaat 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ttagaagctggttggattaataatgttggaaatgttgatcaacaacaacaacaaataaat 347
Query: 958 tcacttcaacaacaattggcagttgtattacaaagtattaaaaatcatgatgattcatgg 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tcacttcaacaacaattggcagttgtattacaaagtattaaaaatcatgatgattcatgg 287
Query: 1018 ccttttcttcaaccagtttcaattgaagaagtaccaacctattatacaactgtcaaagat 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ccttttcttcaaccagtttcaattgaagaagtaccaacctattatacaactgtcaaagat 227
Query: 1078 cctgtcgaccttcaaatgatctctgatcgtttagcaactggaaattattatatcactaaa 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 cctgtcgaccttcaaatgatctctgatcgtttagcaactggaaattattatatcactaaa 167
Query: 1138 aatatctttttagctgatcttaaaagaatgtgtaataattgtagagaatttaatggtgaa 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 aatatctttttagctgatcttaaaagaatgtgtaataattgtagagaatttaatggtgaa 107
Query: 1198 aattcaccttattatgataacgcagatcgtttag 1231
||||||||||||||||||||||||||||||||||
Sbjct: 106 aattcaccttattatgataacgcagatcgtttag 73
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,467,423,458
Number of extensions: 96531360
Number of successful extensions: 9967702
Number of sequences better than 10.0: 205
Length of query: 1302
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1278
Effective length of database: 97,308,875,965
Effective search space: 124360743483270
Effective search space used: 124360743483270
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.27 |
| Homology vs Protein |
Query= Contig-U10060-1 (Contig-U10060-1Q) /CSM_Contig/Contig-U10060-1Q.Seq.d
(1302 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CP001325_413(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 320 5e-86
AF440227_1(AF440227|pid:none) Zea mays histone acetyl transferas... 315 3e-84
AB052158_1(AB052158|pid:none) Gallus gallus mRNA for GCN5, compl... 311 3e-83
EF677880_1(EF677880|pid:none) Picea sitchensis clone WS0277_C21 ... 308 2e-82
(Q6FTW5) RecName: Full=Histone acetyltransferase GCN5; ... 307 5e-82
S71788(S71788)P/CAF protein - human 307 6e-82
AK150225_1(AK150225|pid:none) Mus musculus bone marrow macrophag... 306 8e-82
(Q9JHD2) RecName: Full=General control of amino acid synthesis p... 306 8e-82
AK155842_1(AK155842|pid:none) Mus musculus B6-derived CD11 +ve d... 306 1e-81
AK155347_1(AK155347|pid:none) Mus musculus NOD-derived CD11c +ve... 306 1e-81
S71789(S71789) GCN5 protein - human &U57316_1(U57316|pid:none) 306 1e-81
AK145205_1(AK145205|pid:none) Mus musculus mammary gland RCB-052... 306 1e-81
AF029777_1(AF029777|pid:none) Homo sapiens histone acetyltransfe... 306 1e-81
U57317_1(U57317|pid:none) Homo sapiens p300/CBP-associated facto... 306 1e-81
(Q92831) RecName: Full=Histone acetyltransferase PCAF; ... 305 2e-81
(Q9AR19) RecName: Full=Histone acetyltransferase GCN5; ... 303 9e-81
AB052159_1(AB052159|pid:none) Gallus gallus mRNA for PCAF, parti... 303 9e-81
AF254442_1(AF254442|pid:none) Mus musculus PCAF acetyltransferas... 300 6e-80
BX950869_2(BX950869|pid:none) Zebrafish DNA sequence from clone ... 299 1e-79
AY459293_1(AY459293|pid:none) Plasmodium falciparum histone acet... 296 1e-78
(Q03330) RecName: Full=Histone acetyltransferase GCN5; ... 294 4e-78
CU928175_487(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 294 5e-78
AL138656_18(AL138656|pid:none) Arabidopsis thaliana DNA chromoso... 292 2e-77
(Q756G9) RecName: Full=Histone acetyltransferase GCN5; ... 292 2e-77
AF037442_1(AF037442|pid:none) Arabidopsis thaliana histone acety... 290 1e-76
FN392321_1161(FN392321|pid:none) Pichia pastoris GS115 chromosom... 289 2e-76
U47321_1(U47321|pid:none) Tetrahymena thermophila histone acetyl... 288 4e-76
(Q8WZM0) RecName: Full=Histone acetyltransferase GCN5; ... 288 4e-76
CU928180_17(CU928180|pid:none) Kluyveromyces thermotolerans stra... 287 5e-76
CR940347_750(CR940347|pid:none) Theileria annulata strain Ankara... 280 1e-73
AM269976_28(AM269976|pid:none) Aspergillus niger contig An01c029... 278 4e-73
CP000496_540(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 277 7e-73
AY875982_1(AY875982|pid:none) Toxoplasma gondii GNAT family hist... 274 6e-72
CR954208_190(CR954208|pid:none) Ostreococcus tauri strain OTTH05... 271 3e-71
DQ431713_1(DQ431713|pid:none) Neurospora crassa histone acetyltr... 269 1e-70
AM920437_434(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 268 3e-70
AF155929_1(AF155929|pid:none) Toxoplasma gondii histone acetyltr... 258 3e-67
AF197953_1(AF197953|pid:none) Toxoplasma gondii histone acetyltr... 258 3e-67
CP001141_318(CP001141|pid:none) Phaeodactylum tricornutum CCAP 1... 255 3e-66
AJ243201_1(AJ243201|pid:none) Ustilago maydis gcn5 gene for hist... 254 6e-66
AM427351_1(AM427351|pid:none) Vitis vinifera contig VV78X052418.... 233 9e-60
AY779021_1(AY779021|pid:none) Entamoeba histolytica putative GCN... 227 6e-58
X99228_1(X99228|pid:none) S.cerevisiae genomic sequence from chr... 217 6e-55
AK137358_1(AK137358|pid:none) Mus musculus 16 days neonate cereb... 200 1e-49
AY647983_1(AY647983|pid:none) Yeast two-hybrid vector pDG3, comp... 184 8e-45
AY337317_1(AY337317|pid:none) Schistosoma mansoni general contro... 181 5e-44
FN357528_19(FN357528|pid:none) Schistosoma mansoni genome sequen... 181 5e-44
DQ017634_1(DQ017634|pid:none) Danio rerio PCAF mRNA, partial cds. 175 4e-42
AY810845_1(AY810845|pid:none) Schistosoma japonicum clone SJCHGC... 156 1e-36
CP000881_78(CP000881|pid:none) Hemiselmis andersenii chromosome ... 146 1e-33
AY738582_1(AY738582|pid:none) Giardia intestinalis histone acety... 119 2e-25
EU973436_1(EU973436|pid:none) Zea mays clone 398768 unknown mRNA. 116 2e-24
AF475113_1(AF475113|pid:none) Triticum aestivum histone acetyltr... 86 3e-15
AY350906_1(AY350906|pid:none) Sus scrofa general control of amin... 84 9e-15
BC003983_1(BC003983|pid:none) Mus musculus K(lysine) acetyltrans... 84 9e-15
AL832377_1(AL832377|pid:none) Homo sapiens mRNA; cDNA DKFZp451I0... 80 2e-13
AB051527_1(AB051527|pid:none) Homo sapiens mRNA for KIAA1740 pro... 80 2e-13
AY810885_1(AY810885|pid:none) Schistosoma japonicum clone SJCHGC... 78 8e-13
EU850803_1(EU850803|pid:none) Gallus gallus cat eye syndrome chr... 73 2e-11
AF411609_1(AF411609|pid:none) Homo sapiens CECR2B mRNA, partial ... 73 3e-11
BC160926_1(BC160926|pid:none) Rattus norvegicus fetal Alzheimer ... 72 6e-11
AY282495_1(AY282495|pid:none) Homo sapiens bromodomain PHD finge... 71 7e-11
BC067234_1(BC067234|pid:none) Homo sapiens bromodomain PHD finge... 71 7e-11
(Q12830) RecName: Full=Nucleosome-remodeling factor subunit BPTF... 71 7e-11
AL596116_1(AL596116|pid:none) Mouse DNA sequence from clone RP23... 70 1e-10
AL596116_2(AL596116|pid:none) Mouse DNA sequence from clone RP23... 70 1e-10
BC021489_1(BC021489|pid:none) Mus musculus fetal Alzheimer antig... 70 1e-10
AE014296_1212(AE014296|pid:none) Drosophila melanogaster chromos... 70 1e-10
AK165902_1(AK165902|pid:none) Mus musculus lung RCB-0558 LLC cDN... 70 1e-10
BC092639_1(BC092639|pid:none) Rattus norvegicus p300/CBP-associa... 69 3e-10
(Q9W0T1) RecName: Full=Nucleosome-remodeling factor subunit NURF... 69 4e-10
AE014296_66(AE014296|pid:none) Drosophila melanogaster chromosom... 69 4e-10
AF417921_1(AF417921|pid:none) Drosophila melanogaster nucleosome... 69 4e-10
A90097(A90097) hypothetical protein orf313 [imported] - Guillard... 67 1e-09
BT004888_1(BT004888|pid:none) Drosophila melanogaster RE74933 fu... 66 3e-09
AY061103_1(AY061103|pid:none) Drosophila melanogaster LD09043 fu... 64 9e-09
AJ238397_1(AJ238397|pid:none) Drosophila melanogaster mRNA for c... 64 9e-09
AF148962_1(AF148962|pid:none) Drosophila melanogaster ATP-depend... 64 9e-09
AE014297_5003(AE014297|pid:none) Drosophila melanogaster chromos... 64 9e-09
AF314193_1(AF314193|pid:none) Drosophila melanogaster Toutatis (... 63 3e-08
AE013599_1375(AE013599|pid:none) Drosophila melanogaster chromos... 63 3e-08
S32373(S32373)DNA-binding protein TAF-II 250K - fruit fly (Droso... 62 6e-08
(Q9DE13) RecName: Full=Bromodomain adjacent to zinc finger domai... 61 8e-08
BC065123_1(BC065123|pid:none) Mus musculus bromodomain adjacent ... 60 1e-07
AB032252_1(AB032252|pid:none) Homo sapiens BAZ1A mRNA for bromod... 60 1e-07
(O88379) RecName: Full=Bromodomain adjacent to zinc finger domai... 60 1e-07
AK027289_1(AK027289|pid:none) Homo sapiens cDNA FLJ14383 fis, cl... 60 1e-07
AL050089_1(AL050089|pid:none) Homo sapiens mRNA; cDNA DKFZp586E0... 60 1e-07
AK047427_1(AK047427|pid:none) Mus musculus 10 days neonate cereb... 60 1e-07
AB040909_1(AB040909|pid:none) Homo sapiens mRNA for KIAA1476 pro... 60 2e-07
AY486454_1(AY486454|pid:none) Bos taurus p300/CBP-associated fac... 60 2e-07
AB032255_1(AB032255|pid:none) Homo sapiens BAZ2B mRNA for bromod... 60 2e-07
BC150814_1(BC150814|pid:none) Mus musculus bromodomain adjacent ... 59 4e-07
FN392319_994(FN392319|pid:none) Pichia pastoris GS115 chromosome... 57 1e-06
BC078299_1(BC078299|pid:none) Danio rerio polybromo 1, like, mRN... 57 1e-06
BC170384_1(BC170384|pid:none) Xenopus laevis chromatin remodelli... 56 2e-06
(Q8UVR5) RecName: Full=Bromodomain adjacent to zinc finger domai... 56 2e-06
FN392321_64(FN392321|pid:none) Pichia pastoris GS115 chromosome ... 56 2e-06
FN357292_74(FN357292|pid:none) Schistosoma mansoni genome sequen... 54 9e-06
AK140558_1(AK140558|pid:none) Mus musculus 10 days neonate cereb... 54 9e-06
AK122243_1(AK122243|pid:none) Mus musculus mRNA for mKIAA0314 pr... 54 9e-06
(Q91YE5) RecName: Full=Bromodomain adjacent to zinc finger domai... 54 9e-06
BC148495_1(BC148495|pid:none) Synthetic construct Mus musculus c... 54 9e-06
BC152739_1(BC152739|pid:none) Synthetic construct Homo sapiens c... 54 1e-05
BC116182_1(BC116182|pid:none) Homo sapiens TAF1-like RNA polymer... 54 1e-05
(Q8IZX4) RecName: Full=Transcription initiation factor TFIID 210... 54 1e-05
AB032254_1(AB032254|pid:none) Homo sapiens BAZ2A mRNA for bromod... 54 1e-05
AE013599_3027(AE013599|pid:none) Drosophila melanogaster chromos... 54 1e-05
AB002312_1(AB002312|pid:none) Homo sapiens mRNA for KIAA0314 pro... 54 1e-05
AK129435_1(AK129435|pid:none) Mus musculus mRNA for mKIAA1740 pr... 54 1e-05
CP000501_306(CP000501|pid:none) Pichia stipitis CBS 6054 chromos... 54 2e-05
CR382131_839(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 54 2e-05
AJ549249_1(AJ549249|pid:none) Homo sapiens partial mRNA for puta... 53 2e-05
AJ555148_1(AJ555148|pid:none) Homo sapiens partial mRNA for puta... 53 2e-05
(Q60544) RecName: Full=Transcription initiation factor TFIID sub... 53 2e-05
FN357614_14(FN357614|pid:none) Schistosoma mansoni genome sequen... 53 2e-05
AB209316_1(AB209316|pid:none) Homo sapiens mRNA for TBP-associat... 53 2e-05
A40262(A40262;S03005;S00830;S32352;S32353) transcription initiat... 53 2e-05
AB300418_1(AB300418|pid:none) Homo sapiens N-TAF1 mRNA for TAF1 ... 53 2e-05
AJ549248_1(AJ549248|pid:none) Homo sapiens partial mRNA for puta... 53 2e-05
BC156425_1(BC156425|pid:none) Synthetic construct Mus musculus c... 53 3e-05
AK046668_1(AK046668|pid:none) Mus musculus 4 days neonate male a... 53 3e-05
(Q8BQQ7) RecName: Full=Transcription initiation factor TFIID sub... 53 3e-05
BC047418_1(BC047418|pid:none) Mus musculus TAF1 RNA polymerase I... 53 3e-05
BC094568_1(BC094568|pid:none) Mus musculus TAF1 RNA polymerase I... 53 3e-05
AE017342_341(AE017342|pid:none) Cryptococcus neoformans var. neo... 52 4e-05
FN357708_2(FN357708|pid:none) Schistosoma mansoni genome sequenc... 52 5e-05
AE014298_1154(AE014298|pid:none) Drosophila melanogaster chromos... 52 6e-05
AK222438_1(AK222438|pid:none) Ciona intestinalis mRNA for zinc f... 52 6e-05
(P13709) RecName: Full=Homeotic protein female sterile; AltName:... 52 6e-05
AL606837_9(AL606837|pid:none) Brugia malayi genomic DNA MIF-1 l... 51 8e-05
CU633453_110(CU633453|pid:none) Podospora anserina genomic DNA c... 51 8e-05
BC141399_1(BC141399|pid:none) Mus musculus bromodomain adjacent ... 51 8e-05
(Q58F21) RecName: Full=Bromodomain testis-specific protein; AltN... 51 1e-04
T19481(T19481;T25434)hypothetical protein C26C6.1 - Caenorhabdit... 50 1e-04
AB463450_1(AB463450|pid:none) Synthetic construct DNA, clone: pF... 50 1e-04
BC017582_1(BC017582|pid:none) Homo sapiens bromodomain, testis-s... 50 1e-04
AB208640_1(AB208640|pid:none) Mus musculus Brdt mRNA for bromodo... 50 1e-04
AK303008_1(AK303008|pid:none) Homo sapiens cDNA FLJ55453 complet... 50 1e-04
AE016818_414(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 50 1e-04
AY338951_1(AY338951|pid:none) Homo sapiens testis-specific BRDT ... 50 1e-04
(Q91Y44) RecName: Full=Bromodomain testis-specific protein; AltN... 50 1e-04
(Q9ULI0) RecName: Full=ATPase family AAA domain-containing prote... 50 2e-04
AK131301_1(AK131301|pid:none) Homo sapiens cDNA FLJ16266 fis, cl... 50 2e-04
AK125718_1(AK125718|pid:none) Homo sapiens cDNA FLJ43730 fis, cl... 50 2e-04
BC123310_1(BC123310|pid:none) Xenopus laevis hypothetical protei... 50 2e-04
AE017341_630(AE017341|pid:none) Cryptococcus neoformans var. neo... 50 2e-04
BC062700_1(BC062700|pid:none) Homo sapiens bromodomain, testis-s... 50 2e-04
BC161214_1(BC161214|pid:none) Xenopus tropicalis cDNA clone IMAG... 50 2e-04
AF391288_5(AF391288|pid:none) Branchiostoma floridae cosmid MPMG... 50 2e-04
BC095028_1(BC095028|pid:none) Danio rerio wu:fi25h02, mRNA (cDNA... 50 2e-04
BC025482_1(BC025482|pid:none) Mus musculus tripartite motif-cont... 49 3e-04
(Q64127) RecName: Full=Transcription intermediary factor 1-alpha... 49 3e-04
S78219_1(S78219|pid:none) nuclear protein TIF1 [mice, mRNA, 3951... 49 3e-04
AK133144_1(AK133144|pid:none) Mus musculus adult male testis cDN... 49 3e-04
BC045866_1(BC045866|pid:none) Danio rerio bromodomain-containing... 49 4e-04
AK302679_1(AK302679|pid:none) Homo sapiens cDNA FLJ53462 complet... 49 4e-04
(Q9UIG0) RecName: Full=Bromodomain adjacent to zinc finger domai... 49 4e-04
AM270079_55(AM270079|pid:none) Aspergillus niger contig An04c018... 49 4e-04
(O15164) RecName: Full=Transcription intermediary factor 1-alpha... 49 4e-04
AF119042_1(AF119042|pid:none) Homo sapiens transcriptional inter... 49 4e-04
(P35817) RecName: Full=Bromodomain-containing factor 1; &S55955... 49 5e-04
(Q90941) RecName: Full=Protein polybromo-1; &JC5056(JC5056;S606... 49 5e-04
(Q8CDM1) RecName: Full=ATPase family AAA domain-containing prote... 49 5e-04
CS185621_1(CS185621|pid:none) Sequence 104 from Patent EP1591448. 49 5e-04
(Q5RDX4) RecName: Full=ATPase family AAA domain-containing prote... 49 5e-04
AE016818_55(AE016818|pid:none) Ashbya gossypii (= Eremothecium g... 49 5e-04
U18116_1(U18116|pid:none) Saccharomyces cerevisiae Bdf1p (BDF1) ... 49 5e-04
AK147545_1(AK147545|pid:none) Mus musculus 14 days pregnant adul... 48 7e-04
(O60885) RecName: Full=Bromodomain-containing protein 4; AltName... 48 7e-04
BC138834_1(BC138834|pid:none) Mus musculus bromodomain containin... 48 7e-04
BC030158_1(BC030158|pid:none) Homo sapiens bromodomain containin... 48 7e-04
BC091649_1(BC091649|pid:none) Homo sapiens bromodomain containin... 48 7e-04
CT033751_3(CT033751|pid:none) Mouse DNA sequence from clone RP24... 48 7e-04
AC004798_1(AC004798|pid:none) Homo sapiens chromosome 19, cosmid... 48 7e-04
CT033751_2(CT033751|pid:none) Mouse DNA sequence from clone RP24... 48 7e-04
BC100641_1(BC100641|pid:none) Rattus norvegicus bromodomain cont... 48 7e-04
BC133132_1(BC133132|pid:none) Danio rerio cDNA clone MGC:158610 ... 48 7e-04
AK154514_1(AK154514|pid:none) Mus musculus NOD-derived CD11c +ve... 48 7e-04
CT033751_1(CT033751|pid:none) Mouse DNA sequence from clone RP24... 48 7e-04
BC082782_1(BC082782|pid:none) Mus musculus bromodomain containin... 48 7e-04
BC035266_1(BC035266|pid:none) Homo sapiens bromodomain containin... 48 7e-04
AK220233_1(AK220233|pid:none) Mus musculus mRNA for mKIAA4191 pr... 48 7e-04
AK304776_1(AK304776|pid:none) Homo sapiens cDNA FLJ61578 complet... 48 9e-04
(O95696) RecName: Full=Bromodomain-containing protein 1; AltName... 48 9e-04
AK292428_1(AK292428|pid:none) Homo sapiens cDNA FLJ75275 complet... 48 9e-04
AL080149_1(AL080149|pid:none) Homo sapiens mRNA; cDNA DKFZp434B0... 48 9e-04
AK302845_1(AK302845|pid:none) Homo sapiens cDNA FLJ51161 complet... 48 9e-04
BC030007_1(BC030007|pid:none) Homo sapiens bromodomain containin... 48 9e-04
Z98885_4(Z98885|pid:none) Human DNA sequence from clone RP3-522J... 48 9e-04
AK304330_1(AK304330|pid:none) Homo sapiens cDNA FLJ51191 complet... 48 9e-04
AK175811_1(AK175811|pid:none) Arabidopsis thaliana mRNA for hypo... 47 0.001
AM270388_18(AM270388|pid:none) Aspergillus niger contig An17c006... 47 0.001
BC168574_1(BC168574|pid:none) Xenopus tropicalis bromodomain con... 47 0.001
FN319547_1(FN319547|pid:none) Schistosoma japonicum isolate Anhu... 47 0.001
AL672176_4(AL672176|pid:none) Zebrafish DNA sequence from clone ... 47 0.001
CR762100_1(CR762100|pid:none) Xenopus tropicalis finished cDNA, ... 47 0.001
AB023035_2(AB023035|pid:none) Arabidopsis thaliana genomic DNA, ... 47 0.001
BC163902_1(BC163902|pid:none) Danio rerio bromodomain-containing... 47 0.001
AC006661_7(AC006661|pid:none) Caenorhabditis elegans fosmid H20J... 47 0.001
FN319546_1(FN319546|pid:none) Schistosoma japonicum isolate Anhu... 47 0.001
AB488461_1(AB488461|pid:none) Oryzias latipes Brpf1 mRNA for bro... 47 0.001
BC005281_1(BC005281|pid:none) Homo sapiens bromodomain, testis-s... 47 0.001
AY074282_1(AY074282|pid:none) Arabidopsis thaliana unknown prote... 47 0.001
BC097199_1(BC097199|pid:none) Danio rerio hypothetical protein L... 47 0.001
BC043784_1(BC043784|pid:none) Xenopus laevis bromodomain contain... 47 0.002
AP003340_13(AP003340|pid:none) Oryza sativa Japonica Group genom... 47 0.002
AK037435_1(AK037435|pid:none) Mus musculus 16 days neonate thymu... 47 0.002
D26362_1(D26362|pid:none) Homo sapiens KIAA0043 mRNA, partial cds. 47 0.002
AB206708_1(AB206708|pid:none) Mus musculus Orfx mRNA, complete c... 47 0.002
AL445931_5(AL445931|pid:none) Human DNA sequence from clone RP11... 47 0.002
CU633897_170(CU633897|pid:none) Podospora anserina genomic DNA c... 47 0.002
AE014187_722(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 47 0.002
BC155901_1(BC155901|pid:none) Xenopus laevis bromodomain contain... 47 0.002
BC031536_1(BC031536|pid:none) Mus musculus bromodomain containin... 47 0.002
(Q8K2F0) RecName: Full=Bromodomain-containing protein 3; AltName... 47 0.002
AF269193_1(AF269193|pid:none) Mus musculus bromodomain-containin... 47 0.002
BC106309_1(BC106309|pid:none) Xenopus laevis bromodomain contain... 47 0.002
AB212272_1(AB212272|pid:none) Mus musculus Orfx mRNA for open re... 47 0.002
BC004832_1(BC004832|pid:none) Mus musculus bromodomain containin... 47 0.002
BT030372_1(BT030372|pid:none) Arabidopsis thaliana At1g76380 mRN... 47 0.002
AP006852_334(AP006852|pid:none) Candida albicans genomic DNA, ch... 47 0.002
AC004238_13(AC004238|pid:none) Arabidopsis thaliana chromosome 2... 47 0.002
AM920436_1738(AM920436|pid:none) Penicillium chrysogenum Wiscons... 46 0.003
BX950178_2(BX950178|pid:none) Zebrafish DNA sequence from clone ... 46 0.003
AJ555149_1(AJ555149|pid:none) Homo sapiens partial mRNA for puta... 46 0.003
BC055533_1(BC055533|pid:none) Danio rerio bromodomain containing... 46 0.003
BC152644_1(BC152644|pid:none) Danio rerio bromodomain containing... 46 0.003
CT005272_347(CT005272|pid:none) Leishmania major strain Friedlin... 46 0.003
AE017351_233(AE017351|pid:none) Cryptococcus neoformans var. neo... 46 0.003
BC151886_1(BC151886|pid:none) Danio rerio bromodomain containing... 46 0.003
EU236152_1(EU236152|pid:none) Danio rerio bromodomain 4 (brd4) m... 46 0.003
AY057662_1(AY057662|pid:none) Arabidopsis thaliana AT3g01770/F28... 46 0.003
AL645941_11(AL645941|pid:none) Human DNA sequence from clone XXb... 46 0.003
AB212273_1(AB212273|pid:none) Mus musculus Brd2 mRNA for bromodo... 46 0.003
(Q6MGA9) RecName: Full=Bromodomain-containing protein 2; AltName... 46 0.003
BC114643_1(BC114643|pid:none) Bos taurus bromodomain containing ... 46 0.003
CR759798_15(CR759798|pid:none) Human DNA sequence from clone DAM... 46 0.003
AC009325_32(AC009325|pid:none) Arabidopsis thaliana chromosome I... 46 0.003
AL645941_12(AL645941|pid:none) Human DNA sequence from clone XXb... 46 0.003
EU402599_1(EU402599|pid:none) Sus scrofa RING3 mRNA, partial cds. 46 0.003
(P25440) RecName: Full=Bromodomain-containing protein 2; AltName... 46 0.003
AB179480_1(AB179480|pid:none) Macaca fascicularis testis cDNA cl... 46 0.003
(Q32S26) RecName: Full=Bromodomain-containing protein 2; &AY957... 46 0.003
BX647233_1(BX647233|pid:none) Homo sapiens mRNA; cDNA DKFZp686N0... 46 0.003
(Q5TJG6) RecName: Full=Bromodomain-containing protein 2; &AJ630... 46 0.003
AK220444_1(AK220444|pid:none) Mus musculus mRNA for mKIAA4005 pr... 46 0.003
BX908719_7(BX908719|pid:none) Human DNA sequence from clone DAMA... 46 0.003
A56619(A56619;S18860;S40781) female sterile homeotic (fsh) homol... 46 0.003
CR382134_346(CR382134|pid:none) Debaryomyces hansenii strain CBS... 46 0.003
CR974462_5(CR974462|pid:none) Mouse DNA sequence from clone RP23... 46 0.003
FN357674_3(FN357674|pid:none) Schistosoma mansoni genome sequenc... 46 0.003
(Q9Y7N0) RecName: Full=Bromodomain-containing protein C1450.02; ... 46 0.003
AF045462_1(AF045462|pid:none) Mus musculus female sterile homeot... 46 0.003
(Q9UTN6) RecName: Full=Chromatin structure-remodeling complex su... 46 0.003
EF214995_1(EF214995|pid:none) Callithrix jacchus clone G19-50.1_... 46 0.003
AL645941_14(AL645941|pid:none) Human DNA sequence from clone XXb... 46 0.003
BX908719_9(BX908719|pid:none) Human DNA sequence from clone DAMA... 46 0.003
FJ481082_1(FJ481082|pid:none) Oryzias dancena bromodomain contai... 45 0.004
(Q6NVM8) RecName: Full=Bromodomain-containing protein 9; &BC067... 45 0.004
BC166206_1(BC166206|pid:none) Xenopus tropicalis hypothetical pr... 45 0.004
AM502254_368(AM502254|pid:none) Leishmania infantum chromosome 36. 45 0.004
FJ481084_4(FJ481084|pid:none) Oryzias dancena retinoid X recepto... 45 0.004
AJ851576_1(AJ851576|pid:none) Gallus gallus mRNA for hypothetica... 45 0.004
AM463855_3(AM463855|pid:none) Vitis vinifera contig VV78X242303.... 45 0.004
BC055543_1(BC055543|pid:none) Danio rerio bromodomain containing... 45 0.006
BC168469_1(BC168469|pid:none) Xenopus tropicalis bromodomain and... 45 0.006
(Q7ZUF2) RecName: Full=Bromodomain-containing protein 9; &BC049... 45 0.006
EF210363_7(EF210363|pid:none) Salmo salar clone CH214-714P22 MHC... 45 0.006
EF427384_7(EF427384|pid:none) Salmo salar clone BAC CHORI214-92I... 45 0.006
AC012394_12(AC012394|pid:none) Arabidopsis thaliana chromosome 1... 45 0.006
BC095027_1(BC095027|pid:none) Danio rerio bromodomain containing... 45 0.006
CR382323_12(CR382323|pid:none) Zebrafish DNA sequence from clone... 45 0.006
CP000587_50(CP000587|pid:none) Ostreococcus lucimarinus CCE9901 ... 45 0.006
FM992694_329(FM992694|pid:none) Candida dubliniensis CD36 chromo... 45 0.007
BC125752_1(BC125752|pid:none) Xenopus tropicalis protein kinase ... 45 0.007
FN357702_7(FN357702|pid:none) Schistosoma mansoni genome sequenc... 45 0.007
BC121942_1(BC121942|pid:none) Xenopus tropicalis bromodomain con... 45 0.007
CR954207_51(CR954207|pid:none) Ostreococcus tauri strain OTTH059... 45 0.007
CR380949_98(CR380949|pid:none) Candida glabrata strain CBS138 ch... 45 0.007
AM910994_696(AM910994|pid:none) Plasmodium knowlesi strain H chr... 45 0.007
BC129934_1(BC129934|pid:none) Homo sapiens polybromo 1, mRNA (cD... 44 0.010
BC129935_1(BC129935|pid:none) Homo sapiens polybromo 1, mRNA (cD... 44 0.010
BC172609_1(BC172609|pid:none) Synthetic construct Mus musculus c... 44 0.010
AK056541_1(AK056541|pid:none) Homo sapiens cDNA FLJ31979 fis, cl... 44 0.010
AX280376_1(AX280376|pid:none) Sequence 1 from Patent WO0177147. 44 0.010
BC055508_1(BC055508|pid:none) Danio rerio bromodomain containing... 44 0.010
AF225871_1(AF225871|pid:none) Homo sapiens polybromo-1 (PB1) mRN... 44 0.010
BC084946_1(BC084946|pid:none) Xenopus laevis hypothetical LOC495... 44 0.010
AF225870_1(AF225870|pid:none) Homo sapiens polybromo-1 (PB1) mRN... 44 0.010
BC029037_1(BC029037|pid:none) Mus musculus polybromo 1, mRNA (cD... 44 0.010
AJ311635_1(AJ311635|pid:none) Takifugu rubripes brd3 gene for hy... 44 0.010
AC006712_5(AC006712|pid:none) Caenorhabditis elegans cosmid Y119... 44 0.013
AC006712_6(AC006712|pid:none) Caenorhabditis elegans cosmid Y119... 44 0.013
AF197569_1(AF197569|pid:none) Homo sapiens BAF180 (BAF180) mRNA,... 44 0.013
AY205256_1(AY205256|pid:none) Danio rerio brahma protein-like pr... 44 0.013
AB268588_27(AB268588|pid:none) Gallus gallus genes, MHC region, ... 44 0.013
AB426142_8(AB426142|pid:none) Gallus gallus genes, MHC region, p... 44 0.013
AX883877_1(AX883877|pid:none) Sequence 18782 from Patent EP10746... 44 0.013
(Q54BA2) RecName: Full=Ankyrin repeat, bromo and BTB domain-cont... 44 0.013
DQ993255_26(DQ993255|pid:none) Meleagris gallopavo major histoco... 44 0.013
EU236153_1(EU236153|pid:none) Xenopus laevis bromodomain 4 (BRD4... 44 0.017
EU430758_1(EU430758|pid:none) Homo sapiens SMARCA4 isoform 4 mRN... 44 0.017
AY693123_1(AY693123|pid:none) Saccharomyces cerevisiae clone FLH... 44 0.017
EU430756_1(EU430756|pid:none) Homo sapiens SMARCA4 isoform 3 mRN... 44 0.017
AF254822_1(AF254822|pid:none) Homo sapiens SMARCA4 isoform (SMAR... 44 0.017
BC136644_1(BC136644|pid:none) Homo sapiens SWI/SNF related, matr... 44 0.017
CU928174_532(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 44 0.017
S39059(S39059)protein BRG1 - human 44 0.017
AK030167_1(AK030167|pid:none) Mus musculus adult male testis cDN... 44 0.017
I53078(I53078) homeotic gene regulator - mouse (fragment) &S681... 44 0.017
AK160825_1(AK160825|pid:none) Mus musculus 10 days embryo whole ... 44 0.017
AK147047_1(AK147047|pid:none) Mus musculus 17 days embryo kidney... 44 0.017
AK303352_1(AK303352|pid:none) Homo sapiens cDNA FLJ60382 complet... 44 0.017
EU430757_1(EU430757|pid:none) Homo sapiens SMARCA4 isoform 2 mRN... 44 0.017
AY062532_1(AY062532|pid:none) Arabidopsis thaliana Unknown prote... 44 0.017
FN357554_17(FN357554|pid:none) Schistosoma mansoni genome sequen... 44 0.017
D26156_1(D26156|pid:none) Homo sapiens mRNA for transcriptional ... 44 0.017
AK299761_1(AK299761|pid:none) Homo sapiens cDNA FLJ60344 complet... 44 0.017
(P51532) RecName: Full=Probable global transcription activator S... 44 0.017
BC153216_1(BC153216|pid:none) Bos taurus SWI/SNF related, matrix... 44 0.017
AJ504723_1(AJ504723|pid:none) Rattus norvegicus partial mRNA for... 44 0.017
FN357499_5(FN357499|pid:none) Schistosoma mansoni genome sequenc... 44 0.017
BC076786_1(BC076786|pid:none) Xenopus laevis bromodomain contain... 44 0.017
AK166837_1(AK166837|pid:none) Mus musculus blastocyst blastocyst... 44 0.017
BC151849_1(BC151849|pid:none) Synthetic construct Homo sapiens c... 44 0.017
(Q09948) RecName: Full=Chromatin structure-remodeling complex su... 43 0.022
BC073443_1(BC073443|pid:none) Xenopus laevis hypothetical protei... 43 0.022
(Q9H0E9) RecName: Full=Bromodomain-containing protein 8; AltName... 43 0.022
CR382131_1336(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 43 0.022
BC096849_1(BC096849|pid:none) Danio rerio tripartite motif-conta... 43 0.022
X91638_1(X91638|pid:none) G.gallus mRNA for BRM protein. 43 0.022
(Q6BER5) RecName: Full=Nucleosome-remodeling factor subunit NURF... 43 0.022
FN392321_729(FN392321|pid:none) Pichia pastoris GS115 chromosome... 43 0.022
Z81515_11(Z81515|pid:none) Caenorhabditis elegans Cosmid F26H11,... 43 0.022
BC097528_1(BC097528|pid:none) Xenopus laevis hypothetical protei... 43 0.022
T21435(T21435)hypothetical protein F26H11.3c - Caenorhabditis el... 43 0.022
CR857300_1(CR857300|pid:none) Pongo abelii mRNA; cDNA DKFZp469F2... 43 0.022
AC098693_18(AC098693|pid:none) Oryza sativa (japonica cultivar-g... 43 0.022
AP006756_19(AP006756|pid:none) Oryza sativa Japonica Group genom... 43 0.022
AY598454_1(AY598454|pid:none) Danio rerio transcriptional interm... 43 0.022
AL138755_1(AL138755|pid:none) Human DNA sequence from clone RP11... 43 0.022
AK298045_1(AK298045|pid:none) Homo sapiens cDNA FLJ61143 complet... 43 0.022
Z81515_7(Z81515|pid:none) Caenorhabditis elegans Cosmid F26H11, ... 43 0.022
AL138755_8(AL138755|pid:none) Human DNA sequence from clone RP11... 43 0.022
AY643746_1(AY643746|pid:none) Rattus norvegicus SWI/SNF-related ... 43 0.022
BC142521_1(BC142521|pid:none) Bos taurus SWI/SNF related, matrix... 43 0.022
D26155_1(D26155|pid:none) Homo sapiens mRNA for transcriptional ... 43 0.022
AL138755_2(AL138755|pid:none) Human DNA sequence from clone RP11... 43 0.022
BX088700_87(BX088700|pid:none) DNA centromeric region sequence f... 43 0.022
CR382125_547(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 43 0.022
AP008209_215(AP008209|pid:none) Oryza sativa (japonica cultivar-... 43 0.022
AK300093_1(AK300093|pid:none) Homo sapiens cDNA FLJ59976 complet... 43 0.022
AL138755_6(AL138755|pid:none) Human DNA sequence from clone RP11... 43 0.022
FN357309_22(FN357309|pid:none) Schistosoma mansoni genome sequen... 43 0.022
CR382139_133(CR382139|pid:none) Debaryomyces hansenii strain CBS... 43 0.022
AL138755_5(AL138755|pid:none) Human DNA sequence from clone RP11... 43 0.022
AL138755_9(AL138755|pid:none) Human DNA sequence from clone RP11... 43 0.022
AB210758_1(AB210758|pid:none) Ciona intestinalis mRNA for zinc f... 43 0.028
AL928727_1(AL928727|pid:none) Zebrafish DNA sequence from clone ... 43 0.028
AK129293_1(AK129293|pid:none) Mus musculus mRNA for mKIAA1113 pr... 43 0.028
AL163817_6(AL163817|pid:none) Arabidopsis thaliana DNA chromosom... 43 0.028
(P45481) RecName: Full=CREB-binding protein; EC=2.3.1.4... 43 0.028
EU486162_1(EU486162|pid:none) Danio rerio bromodomain- and PHD f... 42 0.037
A42091(A42091) transcription activator SNF2/SWI2 homolog brm - f... 42 0.037
AE014296_2753(AE014296|pid:none) Drosophila melanogaster chromos... 42 0.037
AK129322_1(AK129322|pid:none) Mus musculus mRNA for mKIAA1286 pr... 42 0.037
BC170291_1(BC170291|pid:none) Xenopus laevis ectodermin, mRNA (c... 42 0.037
CU928169_605(CU928169|pid:none) Kluyveromyces thermotolerans str... 42 0.037
BC157915_1(BC157915|pid:none) Mus musculus bromodomain and PHD f... 42 0.037
AB426154_8(AB426154|pid:none) Gallus gallus genes, MHC region, p... 42 0.037
(Q99PP7) RecName: Full=E3 ubiquitin-protein ligase TRIM33; ... 42 0.037
AF220138_1(AF220138|pid:none) Mus musculus tripartite motif prot... 42 0.037
AC079604_2(AC079604|pid:none) Arabidopsis thaliana chromosome 1 ... 42 0.037
(Q56R14) RecName: Full=E3 ubiquitin-protein ligase TRIM33; ... 42 0.037
BC170319_1(BC170319|pid:none) Xenopus laevis ectodermin, mRNA (c... 42 0.037
BC144976_1(BC144976|pid:none) Mus musculus E1A binding protein p... 42 0.048
AK316442_1(AK316442|pid:none) Homo sapiens cDNA, FLJ79341 comple... 42 0.048
AF230280_1(AF230280|pid:none) Caenorhabditis elegans SWI2/SNF2-l... 42 0.048
CR382122_128(CR382122|pid:none) Kluyveromyces lactis strain NRRL... 42 0.048
AY089422_1(AY089422|pid:none) Drosophila melanogaster AT24535 fu... 42 0.048
BT037312_1(BT037312|pid:none) Zea mays full-length cDNA clone ZM... 42 0.048
AE014297_3538(AE014297|pid:none) Drosophila melanogaster chromos... 42 0.048
BC022975_1(BC022975|pid:none) Mus musculus SWI/SNF related, matr... 42 0.048
AK302758_1(AK302758|pid:none) Homo sapiens cDNA FLJ50304 complet... 42 0.048
CU928179_529(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 42 0.048
BC075641_1(BC075641|pid:none) Mus musculus SWI/SNF related, matr... 42 0.048
FM992690_238(FM992690|pid:none) Candida dubliniensis CD36 chromo... 42 0.048
BC056199_1(BC056199|pid:none) Mus musculus SWI/SNF related, matr... 42 0.048
U13646_6(U13646|pid:none) Caenorhabditis elegans cosmid ZK783, c... 42 0.063
BT029106_1(BT029106|pid:none) Drosophila melanogaster IP14717 fu... 42 0.063
(O74350) RecName: Full=Bromodomain-containing protein C21D10.10;... 42 0.063
AB179127_1(AB179127|pid:none) Macaca fascicularis testis cDNA cl... 42 0.063
T34516(T34516)hypothetical protein ZK783.4 - Caenorhabditis eleg... 42 0.063
AF220137_1(AF220137|pid:none) Homo sapiens tripartite motif prot... 42 0.063
A54277(A54277;S60344) transcription adaptor protein p300 - human... 42 0.063
AL139410_6(AL139410|pid:none) Human DNA sequence from clone RP11... 42 0.063
BC086282_1(BC086282|pid:none) Xenopus laevis hypothetical LOC495... 42 0.063
BC053889_1(BC053889|pid:none) Homo sapiens E1A binding protein p... 42 0.063
AL035410_4(AL035410|pid:none) Human DNA sequence from clone RP4-... 42 0.063
AX399934_1(AX399934|pid:none) Sequence 105 from Patent WO0218424. 42 0.063
(Q09472) RecName: Full=Histone acetyltransferase p300; ... 42 0.063
BC041590_1(BC041590|pid:none) Homo sapiens bromodomain containin... 41 0.083
BC115011_1(BC115011|pid:none) Homo sapiens polybromo 1, mRNA (cD... 41 0.083
AK301987_1(AK301987|pid:none) Homo sapiens cDNA FLJ61450 complet... 41 0.083
AK299157_1(AK299157|pid:none) Homo sapiens cDNA FLJ58253 complet... 41 0.083
CU633865_153(CU633865|pid:none) Podospora anserina genomic DNA c... 41 0.083
AF412333_1(AF412333|pid:none) Xenopus laevis Williams syndrome t... 41 0.083
AK297573_1(AK297573|pid:none) Homo sapiens cDNA FLJ58589 complet... 41 0.083
CR940348_635(CR940348|pid:none) Theileria annulata strain Ankara... 41 0.083
(Q9H8M2) RecName: Full=Bromodomain-containing protein 9; AltName... 41 0.083
AM084226_1(AM084226|pid:none) Xenopus laevis mRNA for Williams s... 41 0.083
AK024392_1(AK024392|pid:none) Homo sapiens cDNA FLJ14330 fis, cl... 41 0.083
CR954202_381(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 41 0.083
BT055938_1(BT055938|pid:none) Zea mays full-length cDNA clone ZM... 41 0.11
CR382130_834(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 41 0.11
AK304771_1(AK304771|pid:none) Homo sapiens cDNA FLJ57039 partial... 41 0.11
BC023452_1(BC023452|pid:none) Mus musculus polybromo 1, mRNA (cD... 41 0.11
(Q92793) RecName: Full=CREB-binding protein; EC=2.3.1.4... 41 0.11
AY462245_1(AY462245|pid:none) Rattus norvegicus CREB-binding pro... 41 0.11
AK301997_1(AK301997|pid:none) Homo sapiens cDNA FLJ55940 complet... 41 0.11
AB029036_1(AB029036|pid:none) Homo sapiens mRNA for KIAA1113 pro... 41 0.11
AF545811_1(AF545811|pid:none) Zea mays bromodomain protein 103 (... 41 0.11
CS330044_1(CS330044|pid:none) Sequence 3 from Patent WO200600741... 41 0.11
AJ132948_1(AJ132948|pid:none) Homo sapiens mRNA for rfg7 protein... 41 0.11
BC143918_1(BC143918|pid:none) Homo sapiens bromodomain and PHD f... 41 0.11
AK074362_1(AK074362|pid:none) Homo sapiens cDNA FLJ23782 fis, cl... 41 0.11
AY232822_1(AY232822|pid:none) Zea mays global transcription fact... 41 0.11
(Q9UPN9) RecName: Full=E3 ubiquitin-protein ligase TRIM33; ... 41 0.11
BC072594_1(BC072594|pid:none) Mus musculus CREB binding protein,... 41 0.11
AL035410_3(AL035410|pid:none) Human DNA sequence from clone RP4-... 41 0.11
AE017351_199(AE017351|pid:none) Cryptococcus neoformans var. neo... 41 0.11
BT062380_1(BT062380|pid:none) Zea mays full-length cDNA clone ZM... 41 0.11
AK043372_1(AK043372|pid:none) Mus musculus 7 days neonate cerebe... 40 0.14
AJ292468_1(AJ292468|pid:none) Mus musculus mRNA for mouse WDR9 p... 40 0.14
AB217914_1(AB217914|pid:none) Lymnaea stagnalis LymCBP mRNA for ... 40 0.14
BC154088_1(BC154088|pid:none) Xenopus tropicalis hypothetical pr... 40 0.14
CR940347_854(CR940347|pid:none) Theileria annulata strain Ankara... 40 0.14
AK293865_1(AK293865|pid:none) Homo sapiens cDNA FLJ60100 complet... 40 0.14
BC046521_1(BC046521|pid:none) Mus musculus bromodomain and PHD f... 40 0.14
(P55201) RecName: Full=Peregrin; AltName: Full=Bromodomain and P... 40 0.14
AF247132_1(AF247132|pid:none) Mus musculus putative chromatin re... 40 0.14
BC005647_1(BC005647|pid:none) Mus musculus bromodomain and PHD f... 40 0.14
JC2069(JC2069)zinc-finger protein, BR140 - human 40 0.14
BC138361_1(BC138361|pid:none) Mus musculus bromodomain and PHD f... 40 0.14
AK156375_1(AK156375|pid:none) Mus musculus activated spleen cDNA... 40 0.14
(Q6E2N3) RecName: Full=E3 ubiquitin-protein ligase TRIM33; ... 40 0.18
BC070273_1(BC070273|pid:none) Homo sapiens cDNA clone IMAGE:6714... 40 0.18
BC114245_1(BC114245|pid:none) Danio rerio tripartite motif-conta... 40 0.18
BT084012_1(BT084012|pid:none) Zea mays full-length cDNA clone ZM... 40 0.24
BC057496_1(BC057496|pid:none) Danio rerio bromodomain containing... 40 0.24
CP000498_251(CP000498|pid:none) Pichia stipitis CBS 6054 chromos... 40 0.24
BC044181_1(BC044181|pid:none) Danio rerio bromodomain containing... 40 0.24
CR380957_186(CR380957|pid:none) Candida glabrata strain CBS138 c... 39 0.31
(O94421) RecName: Full=SWI/SNF chromatin-remodeling complex subu... 39 0.31
AY811595_1(AY811595|pid:none) Schistosoma japonicum SJCHGC04977 ... 39 0.31
FN392320_1198(FN392320|pid:none) Pichia pastoris GS115 chromosom... 39 0.31
AL034491_14(AL034491|pid:none) S.pombe chromosome III cosmid c16... 39 0.31
CP000502_77(CP000502|pid:none) Pichia stipitis CBS 6054 chromoso... 39 0.31
FB781528_1(FB781528|pid:none) Sequence 801 from Patent WO2008034... 39 0.41
AC005074_1(AC005074|pid:none) Homo sapiens BAC clone CTA-208H19 ... 39 0.41
AM920428_921(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 39 0.41
BC048186_1(BC048186|pid:none) Mus musculus protein kinase C bind... 39 0.41
AK000712_1(AK000712|pid:none) Homo sapiens cDNA FLJ20705 fis, cl... 39 0.41
(P34545) RecName: Full=Protein cbp-1; &G88564(G88564) &Z29095_1... 39 0.41
Z29095_3(Z29095|pid:none) Caenorhabditis elegans Cosmid R10E11, ... 39 0.41
CU928168_271(CU928168|pid:none) Kluyveromyces thermotolerans str... 39 0.41
S60123(S60123;S40713)hypothetical protein R10E11.1 - Caenorhabdi... 39 0.41
AB033066_1(AB033066|pid:none) Homo sapiens mRNA for KIAA1240 pro... 39 0.41
BT041671_1(BT041671|pid:none) Zea mays full-length cDNA clone ZM... 39 0.41
Z29095_2(Z29095|pid:none) Caenorhabditis elegans Cosmid R10E11, ... 39 0.41
AM270014_30(AM270014|pid:none) Aspergillus niger contig An02c019... 39 0.41
AC144893_7(AC144893|pid:none) Medicago truncatula clone mth2-29d... 39 0.54
AJ292465_1(AJ292465|pid:none) Homo sapiens mRNA for WDR9 protein... 39 0.54
AE017346_239(AE017346|pid:none) Cryptococcus neoformans var. neo... 39 0.54
AL163279_2(AL163279|pid:none) Homo sapiens chromosome 21 segment... 39 0.54
DQ248311_1(DQ248311|pid:none) Homo sapiens rhabdomyosarcoma anti... 39 0.54
AB080587_1(AB080587|pid:none) Homo sapiens WDR9 mRNA for WD repe... 39 0.54
EU974912_1(EU974912|pid:none) Zea mays clone 460998 unknown mRNA. 39 0.54
AE017349_346(AE017349|pid:none) Cryptococcus neoformans var. neo... 39 0.54
M87651_1(M87651|pid:none) Saccharomyces cerevisiae bromodomain o... 39 0.54
AF310250_1(AF310250|pid:none) Homo sapiens IRS-1 PH domain bindi... 38 0.70
BC008909_1(BC008909|pid:none) Homo sapiens pleckstrin homology d... 38 0.70
AK162189_1(AK162189|pid:none) Mus musculus in vitro fertilized e... 38 0.70
AF310251_1(AF310251|pid:none) Mus musculus IRS-1 PH domain bindi... 38 0.70
AK067716_1(AK067716|pid:none) Oryza sativa Japonica Group cDNA c... 38 0.70
AK075124_1(AK075124|pid:none) Homo sapiens cDNA FLJ90643 fis, cl... 38 0.70
AL356776_1(AL356776|pid:none) Human DNA sequence from clone RP11... 38 0.70
AX405780_1(AX405780|pid:none) Sequence 195 from Patent WO0222660. 38 0.70
(Q96ME2) RecName: Full=PH-interacting protein; Short=PH... 38 0.70
BC137488_1(BC137488|pid:none) Homo sapiens pleckstrin homology d... 38 0.70
BC160290_1(BC160290|pid:none) Synthetic construct Mus musculus c... 38 0.70
DQ082999_1(DQ082999|pid:none) Homo sapiens transcriptional repre... 38 0.91
(Q9H1F4) RecName: Full=Protein kinase C-binding protein 1; AltNa... 38 0.91
AK122966_1(AK122966|pid:none) Homo sapiens cDNA FLJ16698 fis, cl... 38 0.91
DQ368670_1(DQ368670|pid:none) Homo sapiens RACK7 isoform b mRNA,... 38 0.91
BC146802_1(BC146802|pid:none) Homo sapiens zinc finger, MYND-typ... 38 0.91
BC063267_1(BC063267|pid:none) Mus musculus protein kinase C bind... 38 0.91
AE014297_3668(AE014297|pid:none) Drosophila melanogaster chromos... 38 0.91
AL589902_4(AL589902|pid:none) Mouse DNA sequence from clone RP23... 38 0.91
>CP001325_413(CP001325|pid:none) Micromonas sp. RCC299 chromosome 4,
complete sequence.
Length = 489
Score = 320 bits (821), Expect = 5e-86
Identities = 167/351 (47%), Positives = 227/351 (64%), Gaps = 16/351 (4%)
Frame = +1
Query: 235 RGITAKEEKERGILRFEVITNDSSSKNLELLMNLKNVFSKQLPKMPREYIVRLMFDRFHH 414
R I ++++E G L + VI ND +N+ L+NLKN+FSKQLP MP+EYIVRL+ D HH
Sbjct: 117 REIHLRKQEEDGELVYMVIKNDGEEQNMIWLVNLKNIFSKQLPNMPKEYIVRLVMDPRHH 176
Query: 415 SLLIIKNNNVIGGICFRPFQQQGFIEIAFCAITSSEQVKGYGSFLMTHLKEH-NRKVGIY 591
S++ +KNN VIGGI +RPF +Q EIAFCA++++EQVKGYG+ LM HLKE+ K +
Sbjct: 177 SMICLKNNTVIGGITYRPFWRQNMGEIAFCAVSANEQVKGYGTRLMNHLKEYVCDKENMT 236
Query: 592 HFLTFADNFAIEYFQKQGFTHDITLLKEKWKGFIQEYDGGSLMECVVHPNVTYLDIPTMV 771
H +TFADN A+ YFQKQGFT D+ + +EKW G+I+EYDGG++MEC + V+Y + P M+
Sbjct: 237 HLITFADNNAVGYFQKQGFTKDVMMEREKWVGYIKEYDGGTIMECALSAQVSYTEFPVMI 296
Query: 772 KAQRNALNEKIRTISTSHLVYSGLQCFN-----YGQRR-IPIEKIPGILEAGW------- 912
+ QR A++EK+R +S SH+VY GL F G R+ +P E I GI EAGW
Sbjct: 297 RQQRAAVDEKVREMSNSHVVYPGLAQFKGPAGPGGVRKPVPPEVIKGIKEAGWEPPGPPR 356
Query: 913 --INNVGNVDXXXXXXXXXXXXXXXXXXSIKNHDDSWPFLQPVSIEEVPTYYTTVKDPVD 1086
+ + G D ++NH DSWPF+ PV EEVP YY VKDP+
Sbjct: 357 YRLVHPGCGDGTPTTDNLHRFMVALVNL-VQNHIDSWPFISPVPAEEVPDYYDVVKDPIC 415
Query: 1087 LQMISDRLATGNYYITKNIFLADLKRMCNNCREFNGENSPYYDNADRLEKY 1239
L+ I +R+ +G YY T +F AD + M NNCR +N ++ +Y NA RLE Y
Sbjct: 416 LETIKERVESGEYYQTLEMFAADFRLMFNNCRLYNAPDTVFYKNATRLEAY 466
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,629,729,672
Number of extensions: 28613458
Number of successful extensions: 60317
Number of sequences better than 10.0: 599
Number of HSP's gapped: 59804
Number of HSP's successfully gapped: 745
Length of query: 434
Length of database: 1,040,966,779
Length adjustment: 131
Effective length of query: 303
Effective length of database: 621,205,444
Effective search space: 188225249532
Effective search space used: 188225249532
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
1 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
1 |
| CH (FL, L) |
0 |
| CF (FL, S) |
1 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |