| Contig-U10057-1 |
| Contig ID |
Contig-U10057-1 |
| Contig update |
2002. 9.13 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
1233 |
| Chromosome number (1..6, M) |
4 |
| Chromosome length |
5430582 |
| Start point |
2768621 |
| End point |
2767405 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
8 |
| Number of EST |
12 |
| Link to clone list |
U10057 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.18 |
| Homology vs DNA |
Query= Contig-U10057-1 (Contig-U10057-1Q) /CSM_Contig/Contig-U10057-1Q.Seq.d
(1233 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ435419) Dictyostelium discoideum cDNA clone:ddv27g02, 3' ... 1239 0.0 2
(BJ398084) Dictyostelium discoideum cDNA clone:dds10l21, 3' ... 1178 0.0 1
(BJ432738) Dictyostelium discoideum cDNA clone:ddv19i18, 3' ... 1172 0.0 1
(BJ401112) Dictyostelium discoideum cDNA clone:dds22m06, 3' ... 1170 0.0 1
(BJ435146) Dictyostelium discoideum cDNA clone:ddv26a11, 3' ... 1126 0.0 3
(BJ374088) Dictyostelium discoideum cDNA clone:ddc6o12, 3' e... 1114 0.0 1
(BJ346879) Dictyostelium discoideum cDNA clone:dda25k11, 3' ... 1112 0.0 1
(BJ398218) Dictyostelium discoideum cDNA clone:dds11c15, 3' ... 1061 0.0 1
(BJ386834) Dictyostelium discoideum cDNA clone:dds10l21, 5' ... 650 0.0 3
(BJ416375) Dictyostelium discoideum cDNA clone:ddv26a11, 5' ... 617 0.0 2
(BJ414562) Dictyostelium discoideum cDNA clone:ddv19i18, 5' ... 620 0.0 3
(BJ329543) Dictyostelium discoideum cDNA clone:dda25k11, 5' ... 642 0.0 3
(BJ416718) Dictyostelium discoideum cDNA clone:ddv27g02, 5' ... 632 0.0 3
(BJ390370) Dictyostelium discoideum cDNA clone:dds22m06, 5' ... 650 0.0 2
(BJ386944) Dictyostelium discoideum cDNA clone:dds11c15, 5' ... 640 0.0 3
(BJ360507) Dictyostelium discoideum cDNA clone:ddc6o12, 5' e... 597 0.0 3
(BJ390503) Dictyostelium discoideum cDNA clone:dds22m17, 5' ... 595 e-165 1
(BJ401261) Dictyostelium discoideum cDNA clone:dds22m17, 3' ... 168 3e-37 1
(ES735789) Nad03b_80_A12_C005.g1 Nuphar advena flower bud li... 52 2e-18 5
(AW335112) S43C9 AGS-1 Pneumocystis carinii cDNA 3', mRNA se... 64 5e-09 2
(CD749572) rd59d04.y1 Meloidogyne incognita parasitic adult ... 40 2e-08 4
(FG069362) UI-FF-IF0-aac-n-02-0-UI.r1 Ceratitis capitata emb... 64 3e-07 2
(EE262104) H08_H08ff3l16_pDNRf_514343 Myzus persicae, line F... 46 2e-06 4
(CF706731) CCACN33TO C.neoformans strain JEC21 Cryptococcus ... 40 2e-05 3
(CF700459) CCAF216TR C.neoformans strain JEC21 Cryptococcus ... 40 2e-05 3
(CF709675) CCAA029TR C.neoformans strain JEC21 Cryptococcus ... 40 2e-05 3
(CF680843) CCAA173TR C.neoformans strain JEC21 Cryptococcus ... 40 2e-05 3
(CF686090) CCAH075TR C.neoformans strain JEC21 Cryptococcus ... 40 2e-05 3
(CF716261) CCAID87TR C.neoformans strain JEC21 Cryptococcus ... 40 2e-05 3
(CF708226) CCAHU03TR C.neoformans strain JEC21 Cryptococcus ... 40 2e-05 3
(CF677909) CCAGL95TR C.neoformans strain JEC21 Cryptococcus ... 40 2e-05 3
(CF706736) CCACN33TR C.neoformans strain JEC21 Cryptococcus ... 40 2e-05 3
(CF685447) CCAFM66TR C.neoformans strain JEC21 Cryptococcus ... 40 2e-05 3
(CF681584) CCAA619TR C.neoformans strain JEC21 Cryptococcus ... 40 2e-05 3
(CF697514) CCAH487TR C.neoformans strain JEC21 Cryptococcus ... 40 2e-05 3
(CF698861) CCAF515TR C.neoformans strain JEC21 Cryptococcus ... 40 2e-05 3
(CF678211) CCAIB09TR C.neoformans strain JEC21 Cryptococcus ... 40 2e-05 3
(CF722188) CCABS84TR C.neoformans strain JEC21 Cryptococcus ... 40 2e-05 3
(CF699544) CCAAI81TR C.neoformans strain JEC21 Cryptococcus ... 40 2e-05 3
(CF716956) CCABY67TR C.neoformans strain JEC21 Cryptococcus ... 40 2e-05 3
(CF682028) CCABF44TR C.neoformans strain JEC21 Cryptococcus ... 40 2e-05 3
(CF714458) CCACR28TR C.neoformans strain JEC21 Cryptococcus ... 40 2e-05 3
(FF489205) G708P5172RG8.T0 Acorn worm normalized gastrula pE... 50 5e-05 3
(DN314042) PL06017A2B02 cDNA from juvenile hermaphodites Sch... 42 2e-04 2
(DN311332) PL06009B2F03 cDNA from juvenile hermaphodites Sch... 42 2e-04 2
(EI021782) bb26g03.f Dekkera bruxellensis Random Genomic Lib... 54 3e-04 2
(ES218706) MpFVN_ag4_L20 Myzus persicae, line F001, PLRV fre... 46 3e-04 3
(BM167987) EST570510 PyBS Plasmodium yoelii yoelii cDNA clon... 44 0.002 3
(AL419029) T3 end of clone AX0AA036D10 of library AX0AA from... 44 0.005 2
(FC706325) CAXY4065.fwd CAXY Lottia gigantea from male gonad... 38 0.010 4
(DR776972) BAAC-PNP1252P16.g1 C.remanei EST SB146 Caenorhabd... 44 0.011 2
(CJ440047) Macaca fascicularis mRNA, clone: QccE-17343, 5' e... 54 0.013 1
(BJ392462) Dictyostelium discoideum cDNA clone:dds27b19, 5' ... 54 0.013 1
(BJ327499) Dictyostelium discoideum cDNA clone:dda20m13, 5' ... 44 0.040 2
(AM685204) Entamoeba terrapinae GSS, clone terra050c05.q1k. 38 0.041 2
(DB834069) Nilaparvata lugens mRNA, EST clone:NLOC2785, 5' e... 42 0.041 2
(DB842113) Nilaparvata lugens mRNA, EST clone:NLEA2295, 5' e... 42 0.041 2
(BK000554) TPA_inf: Chlamydomonas reinhardtii chloroplast, c... 40 0.047 10
(CK763940) atr02-7ms2-e02 Atr02 Amborella trichopoda cDNA cl... 50 0.048 2
(CU184685) Pig DNA sequence from clone CH242-428C1 on chromo... 52 0.051 1
(EJ244316) 1095333033780 Global-Ocean-Sampling_GS-27-01-01-1... 52 0.051 1
(CT218317) Sus scrofa genomic clone PigE-232O23, genomic sur... 52 0.051 1
(CK756727) atr02-7ms3-e02 Atr02 Amborella trichopoda cDNA cl... 50 0.052 2
(AY429426) Plasmodium falciparum flap endonuclease 1 gene, c... 46 0.056 3
(AF278764) Plasmodium falciparum flap endonuclease-1 (FEN1) ... 46 0.056 3
(DT594485) she01-22ms3-e04 She01 Saruma henryi cDNA clone sh... 40 0.066 2
(ER938252) AF__Bb0021G20f AF__Bb Aquilegia formosa genomic, ... 50 0.085 2
(AL844509) Plasmodium falciparum chromosome 13. 34 0.098 17
(AF093702) Plasmodium falciparum flap endonuclease 1 (fen1) ... 46 0.11 3
(FC797239) CBGC24673.fwd CBGC Lottia gigantea 15h 18h embryo... 40 0.15 2
(FC807110) CBGC8745.fwd CBGC Lottia gigantea 15h 18h embryos... 40 0.15 2
(EB087094) EST49526 Larval Stage 1 Aedes aegypti cDNA clone ... 40 0.16 2
(DW166425) CLVY4908.b1_H04.ab1 CLV(XYZ) lettuce virosa Lactu... 50 0.20 1
(DW160845) CLVY12896.b1_O08.ab1 CLV(XYZ) lettuce virosa Lact... 50 0.20 1
(CJ463518) Macaca fascicularis mRNA, clone: QnpA-11861, 5' e... 50 0.20 1
(BJ390530) Dictyostelium discoideum cDNA clone:dds22b24, 5' ... 50 0.20 1
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 38 0.21 17
(CJ488076) Macaca fascicularis mRNA, clone: QtsA-15769, 5' e... 40 0.23 2
(EJ969706) 1093022072072 Global-Ocean-Sampling_GS-30-02-01-1... 38 0.23 2
(EJ966918) 1093022050184 Global-Ocean-Sampling_GS-30-02-01-1... 38 0.23 2
(CJ443796) Macaca fascicularis mRNA, clone: QccE-21368, 5' e... 40 0.24 2
(AC062025) Homo sapiens chromosome 18 clone RP11-261I12, WOR... 38 0.26 7
(BJ392866) Dictyostelium discoideum cDNA clone:dds29p05, 5' ... 40 0.32 3
(AM470992) Vitis vinifera contig VV78X004257.9, whole genome... 34 0.34 4
(CB256982) 51-E012740-027-002-F14-T7R MPIZ-ADIS-027 Arabidop... 36 0.34 3
(FC740235) CBBI1172.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 32 0.35 4
(FC703312) CAXY1915.fwd CAXY Lottia gigantea from male gonad... 32 0.45 4
(AC116551) Dictyostelium discoideum chromosome 2 map complem... 34 0.50 9
(DV783963) CL__01_R_T3___G17_T_077 Bos taurus CF-24-HW liver... 34 0.53 3
(CS609809) Sequence 254 from Patent EP1795597. 38 0.54 2
(BD186902) Nucleic acids isolated from neuroblastoma. 38 0.54 2
(BD100276) Novel genes cloned in humanneuroblastoma and frag... 38 0.57 2
(BD020338) Novel gene and novel gene fragment cloned in huma... 38 0.57 2
(CO830402) LM_GB5_010728 Locusta migratoria gregarious phase... 38 0.58 2
(DQ866050) Simosyrphus grandicornis mitochondrion, complete ... 42 0.67 3
(BJ416490) Dictyostelium discoideum cDNA clone:ddv26h16, 5' ... 40 0.68 2
(AC209107) Populus trichocarpa clone POP088-K16, complete se... 36 0.68 6
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 32 0.70 17
(AL035475) Plasmodium falciparum MAL4P2. 46 0.73 9
(FI162603) MUGQ_CH252P007O03Sp6_CH0264_002 CHORI-252 Vervet ... 48 0.80 1
>(BJ435419) Dictyostelium discoideum cDNA clone:ddv27g02, 3' end,
single read.
Length = 753
Score = 1239 bits (625), Expect(2) = 0.0
Identities = 625/625 (100%)
Strand = Plus / Minus
Query: 500 gggtgtaccaattgtaaaggcaccatgtgaggcagaagcgcaatgtgcagagattgtaaa 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gggtgtaccaattgtaaaggcaccatgtgaggcagaagcgcaatgtgcagagattgtaaa 667
Query: 560 gaagggtaaagcatgggcaaccgggtcagaggatatggattctttgacattaggttcaac 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gaagggtaaagcatgggcaaccgggtcagaggatatggattctttgacattaggttcaac 607
Query: 620 agtactacttagacgtcttttcttttcagaagcaaagaaaatgccaattctagaatttga 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 agtactacttagacgtcttttcttttcagaagcaaagaaaatgccaattctagaatttga 547
Query: 680 attacaatcagtattggagggtttagggttaactcaagatgagtttattgatctttccat 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 attacaatcagtattggagggtttagggttaactcaagatgagtttattgatctttccat 487
Query: 740 tcttttaggttgtgattattgtgatagtatcaaaggtattggtccaaagagagcaattga 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tcttttaggttgtgattattgtgatagtatcaaaggtattggtccaaagagagcaattga 427
Query: 800 gttaattcaaaaacataaatcattggaggaggtaatcaaacatttagataaatccaaata 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gttaattcaaaaacataaatcattggaggaggtaatcaaacatttagataaatccaaata 367
Query: 860 cccattaccagagtttttcccatacccagaggtgagagaattatttaaaaatccaaatgt 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cccattaccagagtttttcccatacccagaggtgagagaattatttaaaaatccaaatgt 307
Query: 920 tattccagctgatcaattaccaccttttcaatggaaagatccagatgttgaaggtttaaa 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tattccagctgatcaattaccaccttttcaatggaaagatccagatgttgaaggtttaaa 247
Query: 980 taaatttttagttgaagaaatgggtttctctgatgttagagtcgctcaaggtattgaaaa 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 taaatttttagttgaagaaatgggtttctctgatgttagagtcgctcaaggtattgaaaa 187
Query: 1040 attaaagaaatttaaaaatacaagtgttcaatctcgtatggactcttttataactgtaat 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 attaaagaaatttaaaaatacaagtgttcaatctcgtatggactcttttataactgtaat 127
Query: 1100 taaaaaaccagaagatccaaatgat 1124
|||||||||||||||||||||||||
Sbjct: 126 taaaaaaccagaagatccaaatgat 102
Score = 60.0 bits (30), Expect(2) = 0.0
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 472 agattgtataaaacttttaacattaatggg 501
||||||||||||||||||||||||||||||
Sbjct: 753 agattgtataaaacttttaacattaatggg 724
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,469,823,732
Number of extensions: 97345827
Number of successful extensions: 8553490
Number of sequences better than 10.0: 315
Length of query: 1233
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1209
Effective length of database: 97,308,875,965
Effective search space: 117646431041685
Effective search space used: 117646431041685
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.27 |
| Homology vs Protein |
Query= Contig-U10057-1 (Contig-U10057-1Q) /CSM_Contig/Contig-U10057-1Q.Seq.d
(1233 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ719700_1(AJ719700|pid:none) Gallus gallus mRNA for hypothetica... 216 3e-99
(P39750) RecName: Full=DNA repair protein rad2; EC=3.1.... 211 5e-99
AK076977_1(AK076977|pid:none) Mus musculus adult male testis cDN... 212 6e-99
AB191468_2(AB191468|pid:none) Mus musculus 1810006K21Rik, Fen1 g... 212 6e-99
BT057011_1(BT057011|pid:none) Salmo salar clone ssal-evf-558-176... 212 8e-99
AY890734_1(AY890734|pid:none) Synthetic construct Homo sapiens c... 211 4e-98
(P39748) RecName: Full=Flap endonuclease 1; Short=FEN-1... 211 4e-98
AK168731_1(AK168731|pid:none) Mus musculus 17 days embryo heart ... 209 4e-98
(P70054) RecName: Full=Flap endonuclease 1-B; Short=FEN... 213 7e-98
BT083061_1(BT083061|pid:none) Anoplopoma fimbria clone afim-evh-... 209 1e-97
BT021527_1(BT021527|pid:none) Bos taurus flap structure-specific... 209 2e-97
AY648844_1(AY648844|pid:none) Danio rerio flap structure specifi... 208 3e-97
(Q9SXQ6) RecName: Full=Flap endonuclease 1a; EC=3.1.-.-... 210 1e-96
FN317019_1(FN317019|pid:none) Schistosoma japonicum isolate Anhu... 224 2e-96
EU964485_1(EU964485|pid:none) Zea mays clone 279238 flap endonuc... 207 2e-96
CP000502_167(CP000502|pid:none) Pichia stipitis CBS 6054 chromos... 212 8e-96
AE013599_2493(AE013599|pid:none) Drosophila melanogaster chromos... 220 2e-95
AC024791_9(AC024791|pid:none) Caenorhabditis elegans cosmid Y47G... 214 2e-95
AY014962_1(AY014962|pid:none) Mus musculus flap endonuclease-1 (... 209 2e-94
(P39749) RecName: Full=Flap endonuclease 1; Short=FEN-1... 209 3e-94
AM920435_790(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 187 7e-92
AM270251_71(AM270251|pid:none) Aspergillus niger contig An11c034... 184 2e-90
FN392319_1432(FN392319|pid:none) Pichia pastoris GS115 chromosom... 201 3e-90
CU928168_212(CU928168|pid:none) Kluyveromyces thermotolerans str... 197 6e-88
AB080084_1(AB080084|pid:none) Oryza sativa Japonica Group OsFEN-... 192 7e-88
AM502245_18(AM502245|pid:none) Leishmania infantum chromosome 27. 206 3e-87
CP000079_25(CP000079|pid:none) Leishmania major strain Friedlin ... 207 5e-87
AK301743_1(AK301743|pid:none) Homo sapiens cDNA FLJ51365 complet... 211 2e-86
AM494964_27(AM494964|pid:none) Leishmania braziliensis chromosom... 201 7e-86
CR382126_129(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 197 9e-86
(P26793) RecName: Full=Structure-specific endonuclease RAD27; ... 187 7e-85
AF093702_1(AF093702|pid:none) Plasmodium falciparum flap endonuc... 178 3e-83
AF278764_1(AF278764|pid:none) Plasmodium falciparum flap endonuc... 178 3e-83
AY429426_1(AY429426|pid:none) Plasmodium falciparum flap endonuc... 177 4e-83
AM910985_62(AM910985|pid:none) Plasmodium knowlesi strain H chro... 173 3e-82
AE017344_112(AE017344|pid:none) Cryptococcus neoformans var. neo... 168 2e-81
AB105456_1(AB105456|pid:none) Coprinopsis cinerea fen-1 mRNA for... 169 8e-75
AL590443_105(AL590443|pid:none) chromosome III of strain GB-M1 o... 159 3e-67
CR940348_51(CR940348|pid:none) Theileria annulata strain Ankara ... 144 1e-62
EF575767_1(EF575767|pid:none) Oryza sativa (indica cultivar-grou... 210 4e-58
(O93634) RecName: Full=Flap structure-specific endonuclease; ... 127 6e-57
AY855347_1(AY855347|pid:none) Xiphophorus maculatus flap endonuc... 219 2e-55
(Q8ZYN2) RecName: Full=Flap structure-specific endonuclease; ... 126 4e-55
(Q9V0P9) RecName: Full=Flap structure-specific endonuclease; ... 125 4e-55
(O50123) RecName: Full=Flap structure-specific endonuclease; ... 126 9e-55
(Q8TXU4) RecName: Full=Flap structure-specific endonuclease; ... 131 2e-54
(A4WNC4) RecName: Full=Flap structure-specific endonuclease; ... 120 3e-53
GM017008_144(GM017008|pid:none) Sequence 1838 from Patent EP1923... 121 1e-52
(B6YWX4) RecName: Full=Flap structure-specific endonuclease; ... 122 1e-52
(Q5JGN0) RecName: Full=Flap structure-specific endonuclease; ... 121 1e-52
(A8AAC1) RecName: Full=Flap structure-specific endonuclease; ... 120 3e-52
(A8M9L3) RecName: Full=Flap structure-specific endonuclease; ... 118 7e-52
(A2BMI0) RecName: Full=Flap structure-specific endonuclease; ... 122 3e-49
AB334752_1(AB334752|pid:none) Aeropyrum pernix fen-1 gene for fl... 110 1e-48
(Q9YFY5) RecName: Full=Flap structure-specific endonuclease; ... 109 1e-48
H72765(H72765)probable flap endonuclease-1 APE0115 - Aeropyrum p... 109 2e-48
CP000682_212(CP000682|pid:none) Metallosphaera sedula DSM 5348, ... 127 6e-47
(Q976H6) RecName: Full=Flap structure-specific endonuclease; ... 114 8e-47
AB334755_1(AB334755|pid:none) Aeropyrum pernix fen-1 gene for fl... 114 3e-46
AB334754_1(AB334754|pid:none) Aeropyrum pernix fen-1 gene for fl... 114 3e-46
CP000588_214(CP000588|pid:none) Ostreococcus lucimarinus CCE9901... 188 4e-46
AF058914_9(AF058914|pid:none) Arabidopsis thaliana BAC F21E10, c... 188 4e-46
(Q4JAN1) RecName: Full=Flap structure-specific endonuclease; ... 108 4e-46
(A6UX46) RecName: Full=Flap structure-specific endonuclease; ... 126 4e-46
BT057932_1(BT057932|pid:none) Salmo salar clone ssal-eve-519-244... 173 5e-46
CP001325_362(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 187 7e-46
AB334756_1(AB334756|pid:none) Aeropyrum pernix fen-1 gene for fl... 112 7e-46
BC092837_1(BC092837|pid:none) Danio rerio zgc:110269, mRNA (cDNA... 157 9e-46
AB334758_1(AB334758|pid:none) Aeropyrum pernix fen-1 gene for fl... 111 1e-45
CP000077_718(CP000077|pid:none) Sulfolobus acidocaldarius DSM 63... 108 1e-45
(Q8PYF6) RecName: Full=Flap structure-specific endonuclease; ... 112 3e-45
AE006641_159(AE006641|pid:none) Sulfolobus solfataricus P2, comp... 122 1e-44
EU686646_4(EU686646|pid:none) Uncultured marine crenarchaeote SA... 107 2e-44
CR954208_222(CR954208|pid:none) Ostreococcus tauri strain OTTH05... 182 2e-44
AM451152_9(AM451152|pid:none) Vitis vinifera contig VV78X013054.... 182 3e-44
(Q8TIY5) RecName: Full=Flap structure-specific endonuclease; ... 109 2e-43
(A5UL52) RecName: Full=Flap structure-specific endonuclease; ... 108 2e-43
(A9A4B0) RecName: Full=Flap structure-specific endonuclease; ... 108 9e-43
BX950229_1313(BX950229|pid:none) Methanococcus maripaludis strai... 106 3e-42
(Q9HJD4) RecName: Full=Flap structure-specific endonuclease; ... 110 9e-42
AB261847_1(AB261847|pid:none) Thermoplasma sp. S02 fen-1 gene fo... 108 4e-41
AB261845_1(AB261845|pid:none) Sulfolobus sp. G81 fen-1 gene for ... 115 8e-41
CP000609_279(CP000609|pid:none) Methanococcus maripaludis C5, co... 103 1e-40
AB261839_1(AB261839|pid:none) Sulfolobus sp. Tu A fen-1 gene for... 113 1e-40
AB261843_1(AB261843|pid:none) Sulfolobus sp. M02 fen-1 gene for ... 111 3e-40
(A0RU95) RecName: Full=Flap structure-specific endonuclease; ... 96 4e-40
CP001338_55(CP001338|pid:none) Candidatus Methanosphaerula palus... 102 4e-40
(Q0W6I0) RecName: Full=Flap structure-specific endonuclease; ... 103 6e-40
CP000742_614(CP000742|pid:none) Methanococcus vannielii SB, comp... 100 3e-39
CP000867_1347(CP000867|pid:none) Methanococcus maripaludis C6, c... 100 5e-39
(Q97B98) RecName: Full=Flap structure-specific endonuclease; ... 98 7e-39
AB262391_1(AB262391|pid:none) Thermoplasma sp. P61 fen-1 gene fo... 96 3e-37
AY814756_1(AY814756|pid:none) Schistosoma japonicum SJCHGC07325 ... 157 6e-37
(A3CWV2) RecName: Full=Flap structure-specific endonuclease; ... 99 1e-36
AE016815_160(AE016815|pid:none) Ashbya gossypii (= Eremothecium ... 156 1e-36
(A7IA59) RecName: Full=Flap structure-specific endonuclease; ... 88 1e-35
(Q6L2I9) RecName: Full=Flap structure-specific endonuclease; ... 87 4e-34
(Q5UQW7) RecName: Full=Putative endonuclease L386; EC=3... 96 5e-34
(A2SQC6) RecName: Full=Flap structure-specific endonuclease; ... 82 7e-32
AY810509_1(AY810509|pid:none) Schistosoma japonicum SJCHGC04804 ... 132 2e-29
CP001365_1592(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 98 5e-29
AY714841_3(AY714841|pid:none) Uncultured archaeon GZfos26E7 clon... 126 2e-27
CR936257_1883(CR936257|pid:none) Natronomonas pharaonis DSM 2160... 91 5e-26
(B1YC46) RecName: Full=Flap structure-specific endonuclease; ... 120 1e-25
(A3MY15) RecName: Full=Flap structure-specific endonuclease; ... 119 3e-25
(A1RSC7) RecName: Full=Flap structure-specific endonuclease; ... 118 4e-25
AY714826_1(AY714826|pid:none) Uncultured archaeon GZfos18C8 clon... 116 2e-24
(Q58839) RecName: Full=Flap structure-specific endonuclease; ... 109 2e-22
(B0R5F5) RecName: Full=Flap structure-specific endonuclease; ... 73 4e-22
AE001362_56(AE001362|pid:none) Plasmodium falciparum 3D7 chromos... 104 6e-21
(Q12UT1) RecName: Full=Flap structure-specific endonuclease; ... 102 3e-20
EU686623_18(EU686623|pid:none) Uncultured marine crenarchaeote A... 100 2e-19
FM992691_318(FM992691|pid:none) Candida dubliniensis CD36 chromo... 97 1e-18
(Q60GC1) RecName: Full=Exonuclease 1; EC=3.1.-.-; AltNa... 65 5e-18
CP000581_488(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 65 1e-17
AM910986_140(AM910986|pid:none) Plasmodium knowlesi strain H chr... 93 2e-17
CP000498_320(CP000498|pid:none) Pichia stipitis CBS 6054 chromos... 91 8e-17
CR382139_918(CR382139|pid:none) Debaryomyces hansenii strain CBS... 90 1e-16
CU633901_101(CU633901|pid:none) Podospora anserina genomic DNA c... 90 2e-16
AP003344_17(AP003344|pid:none) Oryza sativa Japonica Group genom... 65 2e-16
AM920433_611(AM920433|pid:none) Penicillium chrysogenum Wisconsi... 89 3e-16
AM270050_5(AM270050|pid:none) Aspergillus niger contig An03c0090... 88 7e-16
CR380952_344(CR380952|pid:none) Candida glabrata strain CBS138 c... 88 7e-16
CR940353_483(CR940353|pid:none) Theileria annulata strain Ankara... 87 9e-16
(Q8L6Z7) RecName: Full=Exonuclease 1; EC=3.1.-.-; 63 9e-16
AC068667_31(AC068667|pid:none) Arabidopsis thaliana chromosome 1... 63 9e-16
CU928176_330(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 87 2e-15
AY692857_1(AY692857|pid:none) Saccharomyces cerevisiae clone FLH... 86 2e-15
CR954212_220(CR954212|pid:none) Ostreococcus tauri strain OTTH05... 86 3e-15
EF188258_4(EF188258|pid:none) Cucumis melo clone BAC 1-21-10 chr... 62 3e-15
AE016819_366(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 84 8e-15
DQ007011_1(DQ007011|pid:none) Babesia sp. WA1 clone WA1-XPG1 unk... 84 8e-15
AM270361_6(AM270361|pid:none) Aspergillus niger contig An16c0090... 60 1e-14
CP000501_228(CP000501|pid:none) Pichia stipitis CBS 6054 chromos... 60 1e-14
FN392322_583(FN392322|pid:none) Pichia pastoris GS115 chromosome... 84 1e-14
AY532606_28(AY532606|pid:none) Rock bream iridovirus strain RBIV... 59 8e-14
FN357693_12(FN357693|pid:none) Schistosoma mansoni genome sequen... 60 1e-13
AP007151_1163(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 54 6e-13
(Q9UQ84) RecName: Full=Exonuclease 1; Short=hExo1; ... 51 8e-13
AF084974_1(AF084974|pid:none) Homo sapiens exonuclease I (EXOI) ... 51 8e-13
AF091754_1(AF091754|pid:none) Homo sapiens exonuclease I splice ... 51 8e-13
AF042282_1(AF042282|pid:none) Homo sapiens Hex1 (HEX1) mRNA, com... 51 8e-13
AF060479_1(AF060479|pid:none) Homo sapiens exonuclease I (EXO1) ... 51 8e-13
CU928166_365(CU928166|pid:none) Kluyveromyces thermotolerans str... 77 1e-12
(Q9QZ11) RecName: Full=Exonuclease 1; Short=mExo1; ... 50 2e-12
AK166425_1(AK166425|pid:none) Mus musculus mammary gland RCB-052... 50 2e-12
CR382125_725(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 57 3e-12
CP000592_228(CP000592|pid:none) Ostreococcus lucimarinus CCE9901... 75 4e-12
AE017341_312(AE017341|pid:none) Cryptococcus neoformans var. neo... 74 1e-11
(P28706) RecName: Full=DNA repair protein rad13; EC=3.1... 74 1e-11
(Q9W6K2) RecName: Full=Exonuclease 1; EC=3.1.-.-; AltNa... 52 1e-11
BC084102_1(BC084102|pid:none) Xenopus laevis exonuclease ExoI, m... 52 1e-11
(P14629) RecName: Full=DNA repair protein complementing XP-G cel... 73 2e-11
DQ810282_8(DQ810282|pid:none) Oryza brachyantha BAC 0002C07, com... 57 2e-11
AC155886_25(AC155886|pid:none) Medicago truncatula chromosome 7 ... 58 2e-11
(P53695) RecName: Full=Exodeoxyribonuclease 1; EC=3.1.-... 48 3e-11
(Q12086) RecName: Full=DNA damage-inducible protein DIN7; ... 54 3e-11
BT067169_1(BT067169|pid:none) Zea mays full-length cDNA clone ZM... 58 4e-11
EU963042_1(EU963042|pid:none) Zea mays clone 256748 XPG I-region... 58 5e-11
(Q64MA3) RecName: Full=Flap endonuclease GEN-like 1; Sh... 53 6e-11
U40795_1(U40795|pid:none) Mus musculus endonuclease (XPG) gene, ... 71 7e-11
(P35689) RecName: Full=DNA repair protein complementing XP-G cel... 71 7e-11
A57650(A57650) repair protein XPG - mouse &D16306_1(D16306|pid:... 71 7e-11
AK137563_1(AK137563|pid:none) Mus musculus adult male bone cDNA,... 71 9e-11
AK160645_1(AK160645|pid:none) Mus musculus 10, 11 days embryo wh... 71 9e-11
AK164205_1(AK164205|pid:none) Mus musculus adult male hippocampu... 71 9e-11
BC141070_1(BC141070|pid:none) Mus musculus excision repair cross... 71 9e-11
(P39875) RecName: Full=Exodeoxyribonuclease 1; EC=3.1.-... 49 9e-11
X89021_1(X89021|pid:none) D.melanogaster mRNA for Tosca protein. 45 2e-10
(Q24558) RecName: Full=Exonuclease 1; EC=3.1.-.-; AltNa... 45 2e-10
AY051794_1(AY051794|pid:none) Drosophila melanogaster LD31018 fu... 45 2e-10
AF462447_1(AF462447|pid:none) Homo sapiens excision repair prote... 70 2e-10
AB047633_1(AB047633|pid:none) Macaca fascicularis brain cDNA, cl... 70 2e-10
AL157769_11(AL157769|pid:none) Human DNA sequence from clone RP1... 70 2e-10
AF550128_1(AF550128|pid:none) Homo sapiens excision repair cross... 70 2e-10
CU633865_112(CU633865|pid:none) Podospora anserina genomic DNA c... 70 2e-10
AY893133_1(AY893133|pid:none) Synthetic construct Homo sapiens c... 70 2e-10
AK294708_1(AK294708|pid:none) Homo sapiens cDNA FLJ51835 complet... 70 2e-10
S35993(S35993;S33319;A54439;I39304) DNA repair protein XPGC - hu... 70 2e-10
AY951945_9(AY951945|pid:none) Triticum monococcum TmBAC 60J11 FR... 52 3e-10
(Q803U7) RecName: Full=Exonuclease 1; EC=3.1.-.-; AltNa... 49 3e-10
(Q9LPD2) RecName: Full=Flap endonuclease GEN-like 1; EC... 55 3e-10
(Q54ED2) RecName: Full=Exonuclease 1; EC=3.1.-.-; 55 1e-09
DQ517337_112(DQ517337|pid:none) Trichoplusia ni ascovirus 2c, co... 67 1e-09
AJ389385_1(AJ389385|pid:none) Drosophila melanogaster partial mR... 67 1e-09
AF162792_1(AF162792|pid:none) Drosophila melanogaster XPG (mus20... 67 1e-09
AF162793_1(AF162793|pid:none) Drosophila melanogaster XPG varian... 67 1e-09
AE014134_1580(AE014134|pid:none) Drosophila melanogaster chromos... 67 1e-09
FN357312_4(FN357312|pid:none) Schistosoma mansoni genome sequenc... 47 3e-09
AL590451_163(AL590451|pid:none) chromosome IX of strain GB-M1 of... 65 4e-09
(Q09708) RecName: Full=Uncharacterized protein C12G12.16c; &CU3... 65 5e-09
EF133465_79(EF133465|pid:none) Heliothis virescens ascovirus 3e,... 64 1e-08
D16305_1(D16305|pid:none) Homo sapiens ERCC5 mRNA, complete cds.... 62 3e-08
CR382131_576(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 62 5e-08
AF162795_1(AF162795|pid:none) Drosophila melanogaster mutant nuc... 61 7e-08
AM398843_66(AM398843|pid:none) Spodoptera frugiperda ascovirus 1... 61 7e-08
BC136227_1(BC136227|pid:none) Xenopus tropicalis DNA-repair prot... 61 9e-08
(Q8BMI4) RecName: Full=Flap endonuclease GEN homolog 1; ... 60 1e-07
AK030995_1(AK030995|pid:none) Mus musculus adult male thymus cDN... 60 1e-07
AK031077_1(AK031077|pid:none) Mus musculus 13 days embryo foreli... 60 1e-07
AB028616_7(AB028616|pid:none) Arabidopsis thaliana genomic DNA, ... 60 2e-07
AF255436_1(AF255436|pid:none) Homo sapiens xeroderma pigmentosum... 60 2e-07
AK299758_1(AK299758|pid:none) Homo sapiens cDNA FLJ61372 complet... 60 2e-07
CP000920_84(CP000920|pid:none) Streptococcus pneumoniae P1031, c... 60 2e-07
CP000936_119(CP000936|pid:none) Streptococcus pneumoniae Hungary... 60 2e-07
CP000921_61(CP000921|pid:none) Streptococcus pneumoniae Taiwan19... 60 2e-07
FN357296_31(FN357296|pid:none) Schistosoma mansoni genome sequen... 60 2e-07
CP000918_85(CP000918|pid:none) Streptococcus pneumoniae 70585, c... 60 2e-07
BC117204_1(BC117204|pid:none) Homo sapiens Gen homolog 1, endonu... 59 3e-07
A32949(A32949) DNA-directed DNA polymerase (EC 2.7.7.7) - Strept... 59 3e-07
AK131387_1(AK131387|pid:none) Homo sapiens cDNA FLJ16464 fis, cl... 59 3e-07
FM211187_42(FM211187|pid:none) Streptococcus pneumoniae ATCC 700... 59 3e-07
CP001033_32(CP001033|pid:none) Streptococcus pneumoniae CGSP14, ... 59 3e-07
(P59200) RecName: Full=DNA polymerase I; Short=POL I; ... 59 3e-07
AL157769_8(AL157769|pid:none) Human DNA sequence from clone RP11... 59 5e-07
AC160924_18(AC160924|pid:none) Medicago truncatula chromosome 7 ... 58 6e-07
CU571081_12(CU571081|pid:none) Zebrafish DNA sequence from clone... 58 6e-07
EU627010_100(EU627010|pid:none) Soft-shelled turtle iridovirus, ... 58 8e-07
AY150217_10(AY150217|pid:none) Ambystoma tigrinum stebbensi viru... 57 1e-06
AF389451_101(AF389451|pid:none) Tiger frog virus, complete genome. 57 1e-06
AP008209_671(AP008209|pid:none) Oryza sativa (japonica cultivar-... 57 1e-06
CP000725_144(CP000725|pid:none) Streptococcus gordonii str. Chal... 57 1e-06
CP000387_91(CP000387|pid:none) Streptococcus sanguinis SK36, com... 57 1e-06
CU928169_97(CU928169|pid:none) Kluyveromyces thermotolerans stra... 57 2e-06
AL590450_76(AL590450|pid:none) chromosome XI of strain GB-M1 of ... 56 2e-06
CR380954_350(CR380954|pid:none) Candida glabrata strain CBS138 c... 56 2e-06
(Q9VRJ0) RecName: Full=Flap endonuclease GEN; EC=3.1.-.... 56 3e-06
AE017343_724(AE017343|pid:none) Cryptococcus neoformans var. neo... 55 4e-06
CP000023_1630(CP000023|pid:none) Streptococcus thermophilus LMG ... 55 5e-06
CP000024_1660(CP000024|pid:none) Streptococcus thermophilus CNRZ... 55 5e-06
CP001108_484(CP001108|pid:none) Prosthecochloris aestuarii DSM 2... 55 7e-06
AE014133_268(AE014133|pid:none) Streptococcus mutans UA159, comp... 54 1e-05
AM440476_1(AM440476|pid:none) Vitis vinifera contig VV78X009059.... 39 2e-05
CP000240_125(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-13... 52 3e-05
AM946015_1672(AM946015|pid:none) Streptococcus uberis 0140J comp... 52 3e-05
BC060659_1(BC060659|pid:none) Mus musculus excision repair cross... 52 4e-05
AY521625_97(AY521625|pid:none) Singapore grouper iridovirus, com... 52 4e-05
CP001229_1133(CP001229|pid:none) Sulfurihydrogenibium azorense A... 52 6e-05
FM204884_158(FM204884|pid:none) Streptococcus equi subsp. zooepi... 51 7e-05
AC146864_6(AC146864|pid:none) Medicago truncatula clone mth2-175... 50 1e-04
EF106972_80(EF106972|pid:none) Uncultured marine Nitrospinaceae ... 50 1e-04
CP000262_165(CP000262|pid:none) Streptococcus pyogenes MGAS10750... 50 2e-04
AM295007_152(AM295007|pid:none) Streptococcus pyogenes Manfredo ... 49 3e-04
CP000829_148(CP000829|pid:none) Streptococcus pyogenes NZ131, co... 49 3e-04
CP000056_156(CP000056|pid:none) Streptococcus pyogenes MGAS6180,... 49 3e-04
CP000261_170(CP000261|pid:none) Streptococcus pyogenes MGAS2096,... 49 3e-04
AE004092_140(AE004092|pid:none) Streptococcus pyogenes M1 GAS, c... 49 3e-04
CP000003_205(CP000003|pid:none) Streptococcus pyogenes MGAS10394... 49 3e-04
AE009949_148(AE009949|pid:none) Streptococcus pyogenes MGAS8232,... 49 3e-04
CP000260_161(CP000260|pid:none) Streptococcus pyogenes MGAS10270... 49 3e-04
AY666015_55(AY666015|pid:none) Grouper iridovirus, complete geno... 49 4e-04
CP000407_1370(CP000407|pid:none) Streptococcus suis 05ZYH33, com... 49 4e-04
CP001357_2537(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 49 5e-04
CP000141_1599(CP000141|pid:none) Carboxydothermus hydrogenoforma... 49 5e-04
AM263198_1900(AM263198|pid:none) Listeria welshimeri serovar 6b ... 48 6e-04
CP000517_1252(CP000517|pid:none) Lactobacillus helveticus DPC 45... 48 6e-04
AH1681(AH1681) 5'-3' exonuclease homolog lin1994 [imported] - Li... 48 6e-04
CP000425_2251(CP000425|pid:none) Lactococcus lactis subsp. cremo... 48 8e-04
U78771_2(U78771|pid:none) Lactococcus lactis DNA polymerase I (p... 48 8e-04
(O32801) RecName: Full=DNA polymerase I; Short=POL I; ... 48 8e-04
CR940347_378(CR940347|pid:none) Theileria annulata strain Ankara... 47 0.001
AM180355_1166(AM180355|pid:none) Clostridium difficile 630 compl... 47 0.001
AY380826_168(AY380826|pid:none) Lymphocystis disease virus - iso... 47 0.001
BX538350_101(BX538350|pid:none) Cryptosporidium parvum chromosom... 47 0.002
CP001175_664(CP001175|pid:none) Listeria monocytogenes HCC23, co... 47 0.002
AE017198_1444(AE017198|pid:none) Lactobacillus johnsonii NCC 533... 47 0.002
CP000083_4835(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 47 0.002
X71341_1(X71341|pid:none) Homo sapiens partial XPGC gene, exon 1. 46 0.002
AE006470_1645(AE006470|pid:none) Chlorobium tepidum TLS, complet... 46 0.003
FM992695_469(FM992695|pid:none) Candida dubliniensis CD36 chromo... 45 0.004
AL365366_4(AL365366|pid:none) Human DNA sequence from clone RP11... 45 0.004
CP001344_643(CP001344|pid:none) Cyanothece sp. PCC 7425, complet... 45 0.004
AY140055_1(AY140055|pid:none) Arabidopsis thaliana exonuclease, ... 45 0.005
AB275482_1(AB275482|pid:none) Bacillus smithii polA gene for DNA... 45 0.005
CP001581_3215(CP001581|pid:none) Clostridium botulinum A2 str. K... 45 0.007
AE017221_690(AE017221|pid:none) Thermus thermophilus HB27, compl... 45 0.007
CP000721_795(CP000721|pid:none) Clostridium beijerinckii NCIMB 8... 45 0.007
CP001083_3145(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 45 0.007
AE016827_225(AE016827|pid:none) Mannheimia succiniciproducens MB... 36 0.009
AE017342_8(AE017342|pid:none) Cryptococcus neoformans var. neofo... 44 0.009
AM412317_3021(AM412317|pid:none) Clostridium botulinum A str. AT... 44 0.009
AK029975_1(AK029975|pid:none) Mus musculus adult male testis cDN... 44 0.009
X98575_1(X98575|pid:none) A.thermophilum pol gene for DNA polyme... 44 0.009
AE017226_1626(AE017226|pid:none) Treponema denticola ATCC 35405,... 44 0.012
AY247643_1(AY247643|pid:none) Thermoanaerobacterium sp. AZ3B.1 D... 44 0.012
AP007281_1181(AP007281|pid:none) Lactobacillus reuteri JCM 1112 ... 44 0.015
CU638744_90(CU638744|pid:none) Podospora anserina genomic DNA ch... 44 0.015
CP001098_481(CP001098|pid:none) Halothermothrix orenii H 168, co... 44 0.015
CR382137_785(CR382137|pid:none) Debaryomyces hansenii strain CBS... 44 0.015
CP000728_2920(CP000728|pid:none) Clostridium botulinum F str. La... 44 0.015
A79145_1(A79145|pid:none) Sequence 7 from Patent EP0835935. 43 0.020
EU708319_1(EU708319|pid:none) Thermus thermophilus strain HJ6 DN... 43 0.020
(P52028) RecName: Full=DNA polymerase I, thermostable; ... 43 0.020
CR382121_55(CR382121|pid:none) Kluyveromyces lactis strain NRRL ... 43 0.020
AL844506_245(AL844506|pid:none) Plasmodium falciparum 3D7 chromo... 43 0.020
AE001437_1085(AE001437|pid:none) Clostridium acetobutylicum ATCC... 43 0.020
CP001185_213(CP001185|pid:none) Thermosipho africanus TCF52B, co... 43 0.026
EF089389_12(EF089389|pid:none) Uncultured marine bacterium HOT0_... 43 0.026
CP000382_784(CP000382|pid:none) Clostridium novyi NT, complete g... 43 0.026
AC069551_7(AC069551|pid:none) Genomic sequence for Arabidopsis t... 42 0.034
AL669986_4(AL669986|pid:none) Neurospora crassa DNA linkage grou... 42 0.034
(P80194) RecName: Full=DNA polymerase I, thermostable; ... 42 0.034
CP000552_1303(CP000552|pid:none) Prochlorococcus marinus str. MI... 42 0.034
CP000890_1718(CP000890|pid:none) Coxiella burnetii RSA 331, comp... 42 0.034
AE016828_1548(AE016828|pid:none) Coxiella burnetii RSA 493, comp... 42 0.034
CP001279_353(CP001279|pid:none) Nautilia profundicola AmH, compl... 42 0.034
CP000111_1353(CP000111|pid:none) Prochlorococcus marinus str. MI... 42 0.045
CP000412_1224(CP000412|pid:none) Lactobacillus delbrueckii subsp... 42 0.045
CR954216_184(CR954216|pid:none) Ostreococcus tauri strain OTTH05... 42 0.045
AP008231_1317(AP008231|pid:none) Synechococcus elongatus PCC 630... 42 0.045
CP000551_1312(CP000551|pid:none) Prochlorococcus marinus str. AS... 42 0.045
CP000100_194(CP000100|pid:none) Synechococcus elongatus PCC 7942... 42 0.045
CU928171_43(CU928171|pid:none) Kluyveromyces thermotolerans stra... 42 0.045
AP008971_343(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 42 0.045
AP009389_1976(AP009389|pid:none) Pelotomaculum thermopropionicum... 42 0.045
CP000454_2042(CP000454|pid:none) Arthrobacter sp. FB24, complete... 42 0.058
CP001019_162(CP001019|pid:none) Coxiella burnetii CbuG_Q212, com... 42 0.058
AM295250_1069(AM295250|pid:none) Staphylococcus carnosus subsp. ... 42 0.058
CP001390_1390(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 42 0.058
AE000512_1592(AE000512|pid:none) Thermotoga maritima MSB8, compl... 42 0.058
CP001020_79(CP001020|pid:none) Coxiella burnetii CbuK_Q154, comp... 42 0.058
CP000923_2104(CP000923|pid:none) Thermoanaerobacter sp. X514, co... 42 0.058
CP000813_2511(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 42 0.058
AL132963_16(AL132963|pid:none) Arabidopsis thaliana DNA chromoso... 41 0.076
CP000612_1575(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 41 0.076
CP000724_3021(CP000724|pid:none) Alkaliphilus metalliredigens QY... 41 0.099
JC4286(JC4286)DNA-directed DNA polymerase (EC 2.7.7.7) - Bacillu... 41 0.099
(P56105) RecName: Full=DNA polymerase I; Short=POL I; ... 41 0.099
CP001072_1430(CP001072|pid:none) Helicobacter pylori Shi470, com... 41 0.099
AE016823_570(AE016823|pid:none) Leptospira interrogans serovar C... 41 0.099
(Q9ZJE9) RecName: Full=DNA polymerase I; Short=POL I; ... 41 0.099
U23149_1(U23149|pid:none) Bacillus stearothermophilus DNA polyme... 41 0.099
(P52026) RecName: Full=DNA polymerase I; Short=POL I; ... 41 0.099
(P30313) RecName: Full=DNA polymerase I, thermostable; ... 41 0.099
L42111_1(L42111|pid:none) Bacillus stearothermophilus DNA polyme... 41 0.099
CP001056_2568(CP001056|pid:none) Clostridium botulinum B str. Ek... 40 0.13
CP000511_3307(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 40 0.13
AM942444_1143(AM942444|pid:none) Corynebacterium urealyticum DSM... 40 0.13
AL590442_39(AL590442|pid:none) chromosome II of strain GB-M1 of ... 40 0.13
AP009351_1356(AP009351|pid:none) Staphylococcus aureus subsp. au... 40 0.17
AM260522_1547(AM260522|pid:none) Helicobacter acinonychis str. S... 40 0.17
CP000553_1582(CP000553|pid:none) Prochlorococcus marinus str. NA... 40 0.17
CP000922_1250(CP000922|pid:none) Anoxybacillus flavithermus WK1,... 40 0.17
AP008955_1405(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 40 0.17
CP001217_1437(CP001217|pid:none) Helicobacter pylori P12, comple... 40 0.17
CP001078_2313(CP001078|pid:none) Clostridium botulinum E3 str. A... 40 0.17
CP000394_1965(CP000394|pid:none) Granulibacter bethesdensis CGDN... 40 0.17
BX571856_1421(BX571856|pid:none) Staphylococcus aureus subsp. au... 40 0.17
(O34996) RecName: Full=DNA polymerase I; Short=POL I; ... 40 0.17
CP000492_516(CP000492|pid:none) Chlorobium phaeobacteroides DSM ... 40 0.17
CR940353_126(CR940353|pid:none) Theileria annulata strain Ankara... 40 0.17
U93028_1(U93028|pid:none) Bacillus stearothermophilus DNA polyme... 40 0.22
EF198253_1(EF198253|pid:none) Bacillus sp. G(2006) DNA polymeras... 40 0.22
EF488810_1(EF488810|pid:none) Bacillus caldolyticus strain XM DN... 40 0.22
AY142940_1(AY142940|pid:none) Heliobacillus mobilis DNA polymera... 40 0.22
(Q04957) RecName: Full=DNA polymerase I; Short=POL I; ... 40 0.22
A84044(A84044) DNA polymerase I polA [imported] - Bacillus halod... 40 0.22
DQ244056_1(DQ244056|pid:none) Geobacillus sp. MKK-2005 thermosta... 39 0.29
FJ215762_1(FJ215762|pid:none) Anoxybacillus sp. NB DNA polymeras... 39 0.29
FJ215758_1(FJ215758|pid:none) Geobacillus bogazici strain NT DNA... 39 0.29
CP000312_1920(CP000312|pid:none) Clostridium perfringens SM101, ... 39 0.29
FJ215757_1(FJ215757|pid:none) Geobacillus kaue strain NB DNA pol... 39 0.29
CP000246_2198(CP000246|pid:none) Clostridium perfringens ATCC 13... 39 0.29
AP006840_848(AP006840|pid:none) Symbiobacterium thermophilum IAM... 39 0.29
FJ215760_1(FJ215760|pid:none) Geobacillus anatolicus strain C4 D... 39 0.29
AM260525_6(AM260525|pid:none) Bartonella tribocorum CIP 105476 c... 39 0.29
CP000108_178(CP000108|pid:none) Chlorobium chlorochromatii CaD3,... 39 0.29
CS277150_1(CS277150|pid:none) Sequence 70 from Patent EP1634890.... 39 0.38
JX0359(JX0359)DNA-directed DNA polymerase (EC 2.7.7.7) - Thermus... 39 0.38
CS277140_1(CS277140|pid:none) Sequence 60 from Patent EP1634890.... 39 0.38
(P75403) RecName: Full=5'-3' exonuclease; EC=3.1.11.-; ... 39 0.38
FJ356013_1(FJ356013|pid:none) Escherichia coli strain DH5 alpha ... 39 0.38
AP006840_2679(AP006840|pid:none) Symbiobacterium thermophilum IA... 39 0.38
CP000252_584(CP000252|pid:none) Syntrophus aciditrophicus SB, co... 39 0.38
AY236419_1(AY236419|pid:none) Thermomicrobium roseum DNA polymer... 39 0.38
D32013_1(D32013|pid:none) Thermus aquaticus gene for DNA polymer... 39 0.38
AF050678_1(AF050678|pid:none) Thermomicrobium roseum DNA polymer... 39 0.38
CS277145_1(CS277145|pid:none) Sequence 65 from Patent EP1634890.... 39 0.38
AF063186_1(AF063186|pid:none) Arthrobacter paraffineus DNA polym... 39 0.49
CP000027_1345(CP000027|pid:none) Dehalococcoides ethenogenes 195... 39 0.49
CR377211_4(CR377211|pid:none) Zebrafish DNA sequence from clone ... 39 0.49
DQ340803_1(DQ340803|pid:none) Geobacillus caldoxylosilyticus DNA... 38 0.64
CP000448_1953(CP000448|pid:none) Syntrophomonas wolfei subsp. wo... 38 0.64
FJ358542_1(FJ358542|pid:none) Thermus sp. YSP2A.A1 PolI (polI) g... 38 0.64
AM286690_2659(AM286690|pid:none) Alcanivorax borkumensis SK2, co... 38 0.64
AP009324_1677(AP009324|pid:none) Staphylococcus aureus subsp. au... 38 0.64
AF193842_1(AF193842|pid:none) Staphylococcus aureus DNA polymera... 38 0.64
T34350(T34350) hypothetical protein T12A2.8 - Caenorhabditis ele... 38 0.64
BA000026_200(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, c... 38 0.64
AY247637_1(AY247637|pid:none) Caldibacillus cellulovorans strain... 38 0.64
BX571856_1732(BX571856|pid:none) Staphylococcus aureus subsp. au... 38 0.64
U86402_1(U86402|pid:none) Bacillus subtilis DNA polymerase I gen... 38 0.64
AY247648_1(AY247648|pid:none) Spirochaeta thermophila strain Z-1... 38 0.84
AJ938182_1549(AJ938182|pid:none) Staphylococcus aureus RF122 com... 38 0.84
CP001184_438(CP001184|pid:none) Ureaplasma urealyticum serovar 1... 37 1.1
CT971583_1617(CT971583|pid:none) Synechococcus WH7803 complete g... 37 1.1
BA000035_1453(BA000035|pid:none) Corynebacterium efficiens YS-31... 37 1.1
FJ358545_1(FJ358545|pid:none) Thermus sp. Tok23.A1 PolI (polI) g... 37 1.1
AE004439_1065(AE004439|pid:none) Pasteurella multocida subsp. mu... 37 1.1
CP000386_1991(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 37 1.1
CP000031_3759(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple... 37 1.1
CP000746_21(CP000746|pid:none) Actinobacillus succinogenes 130Z,... 37 1.1
CR382124_409(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 37 1.1
CP000116_2453(CP000116|pid:none) Thiobacillus denitrificans ATCC... 37 1.1
CP000249_1602(CP000249|pid:none) Frankia sp. CcI3, complete geno... 37 1.1
CP001101_514(CP001101|pid:none) Chlorobium phaeobacteroides BS1,... 37 1.4
AE017126_1232(AE017126|pid:none) Prochlorococcus marinus subsp. ... 37 1.4
CR940348_424(CR940348|pid:none) Theileria annulata strain Ankara... 37 1.4
(O52225) RecName: Full=DNA polymerase I, thermostable; ... 37 1.4
BX571658_72(BX571658|pid:none) Wolinella succinogenes, complete ... 37 1.4
EU016668_24(EU016668|pid:none) Uncultured marine microorganism H... 37 1.4
AP008937_1317(AP008937|pid:none) Lactobacillus fermentum IFO 395... 37 1.4
AE016877_4384(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 37 1.4
AP006716_1470(AP006716|pid:none) Staphylococcus haemolyticus JCS... 37 1.9
CP000878_1215(CP000878|pid:none) Prochlorococcus marinus str. MI... 37 1.9
CP001277_803(CP001277|pid:none) Candidatus Hamiltonella defensa ... 37 1.9
AM910985_187(AM910985|pid:none) Plasmodium knowlesi strain H chr... 37 1.9
AP011115_719(AP011115|pid:none) Rhodococcus opacus B4 DNA, compl... 36 2.4
AE016879_4462(AE016879|pid:none) Bacillus anthracis str. Ames, c... 36 2.4
CP001186_4599(CP001186|pid:none) Bacillus cereus G9842, complete... 36 2.4
AP006861_878(AP006861|pid:none) Chlamydophila felis Fe/C-56 DNA,... 36 2.4
CR382131_926(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 36 2.4
CP001177_4513(CP001177|pid:none) Bacillus cereus AH187, complete... 36 2.4
CP000485_3956(CP000485|pid:none) Bacillus thuringiensis str. Al ... 36 2.4
AE017355_4272(AE017355|pid:none) Bacillus thuringiensis serovar ... 36 2.4
CP000227_4287(CP000227|pid:none) Bacillus cereus Q1, complete ge... 36 2.4
CP001407_4507(CP001407|pid:none) Bacillus cereus 03BB102, comple... 36 2.4
AM494960_139(AM494960|pid:none) Leishmania braziliensis chromoso... 36 3.2
AX763696_1(AX763696|pid:none) Sequence 3 from Patent WO03040180.... 36 3.2
AM502241_152(AM502241|pid:none) Leishmania infantum chromosome 23. 36 3.2
AE015925_127(AE015925|pid:none) Chlamydophila caviae GPIC, compl... 36 3.2
CP000423_1616(CP000423|pid:none) Lactobacillus casei ATCC 334, c... 36 3.2
CT005262_152(CT005262|pid:none) Leishmania major strain Friedlin... 36 3.2
(B0TPG7) RecName: Full=Uncharacterized exonuclease xni; ... 36 3.2
BX927152_26(BX927152|pid:none) Corynebacterium glutamicum ATCC 1... 36 3.2
AM286415_21(AM286415|pid:none) Yersinia enterocolitica subsp. en... 36 3.2
CP000359_1652(CP000359|pid:none) Deinococcus geothermalis DSM 11... 35 4.2
A40597(A40597;E75363;S42112;S42235) DNA-directed DNA polymerase ... 35 4.2
BX294155_239(BX294155|pid:none) Rhodopirellula baltica SH 1 comp... 35 4.2
CP000571_2533(CP000571|pid:none) Burkholderia pseudomallei 668 c... 35 4.2
AM295250_1287(AM295250|pid:none) Staphylococcus carnosus subsp. ... 35 4.2
CP001358_1046(CP001358|pid:none) Desulfovibrio desulfuricans sub... 35 4.2
CP000109_44(CP000109|pid:none) Thiomicrospira crunogena XCL-2, c... 35 4.2
CP000159_1597(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 35 4.2
CP001114_1673(CP001114|pid:none) Deinococcus deserti VCD115, com... 35 5.5
AE015929_1367(AE015929|pid:none) Staphylococcus epidermidis ATCC... 35 5.5
EF676694_1(EF676694|pid:none) Picea sitchensis clone WS02748_G07... 35 5.5
U13615_1(U13615|pid:none) Saccharomyces cerevisiae unknown orf 3... 35 5.5
AC159412_1(AC159412|pid:none) Trypanosoma brucei chromosome 7 cl... 35 5.5
CP000085_603(CP000085|pid:none) Burkholderia thailandensis E264 ... 35 5.5
CP001298_2563(CP001298|pid:none) Methylobacterium chloromethanic... 35 5.5
(Q9PQ75) RecName: Full=5'-3' exonuclease; EC=3.1.11.-; ... 35 5.5
CP000381_209(CP000381|pid:none) Neisseria meningitidis 053442, c... 35 5.5
CP000029_1227(CP000029|pid:none) Staphylococcus epidermidis RP62... 35 5.5
CP000607_1416(CP000607|pid:none) Chlorobium phaeovibrioides DSM ... 35 5.5
AE017143_1048(AE017143|pid:none) Haemophilus ducreyi strain 3500... 35 5.5
CP001390_2348(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 35 5.5
CP000011_307(CP000011|pid:none) Burkholderia mallei ATCC 23344 c... 35 5.5
AJ242630_1(AJ242630|pid:none) Methylobacterium dichloromethanicu... 35 5.5
EF494739_23(EF494739|pid:none) Blastocystis sp. DMP/02-328 mitoc... 35 5.5
CP000125_850(CP000125|pid:none) Burkholderia pseudomallei 1710b ... 35 5.5
BX571860_59(BX571860|pid:none) Photorhabdus luminescens subsp. l... 35 5.5
AM942759_2802(AM942759|pid:none) Proteus mirabilis strain HI4320... 35 5.5
CP001177_4475(CP001177|pid:none) Bacillus cereus AH187, complete... 35 7.1
AE003852_108(AE003852|pid:none) Vibrio cholerae O1 biovar eltor ... 35 7.1
CP001485_539(CP001485|pid:none) Vibrio cholerae MJ-1236 chromoso... 35 7.1
AE016795_858(AE016795|pid:none) Vibrio vulnificus CMCP6 chromoso... 35 7.1
CP001026_659(CP001026|pid:none) Burkholderia ambifaria MC40-6 ch... 35 7.1
CP001185_909(CP001185|pid:none) Thermosipho africanus TCF52B, co... 35 7.1
CP000441_24(CP000441|pid:none) Burkholderia ambifaria AMMD chrom... 35 7.1
AF148854_1(AF148854|pid:none) Pichia angusta trehalose phosphate... 35 7.1
CP000615_926(CP000615|pid:none) Burkholderia vietnamiensis G4 ch... 35 7.1
CP000356_620(CP000356|pid:none) Sphingopyxis alaskensis RB2256, ... 35 7.1
CP001615_135(CP001615|pid:none) Exiguobacterium sp. AT1b, comple... 35 7.1
CP001053_2708(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 35 7.1
BA000037_186(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, chr... 35 7.1
CP001251_822(CP001251|pid:none) Dictyoglomus turgidum DSM 6724, ... 35 7.1
AM270022_65(AM270022|pid:none) Aspergillus niger contig An02c027... 35 7.1
CP001087_165(CP001087|pid:none) Desulfobacterium autotrophicum H... 35 7.1
AM849034_1970(AM849034|pid:none) Clavibacter michiganensis subsp... 35 7.1
BX548175_1510(BX548175|pid:none) Prochlorococcus marinus MIT9313... 34 9.3
AY253313_8(AY253313|pid:none) HIV-1 isolate 01TZBD39_8 from Tanz... 34 9.3
AM910983_83(AM910983|pid:none) Plasmodium knowlesi strain H chro... 34 9.3
(Q8K9D0) RecName: Full=5'-3' exonuclease; EC=3.1.11.-; ... 34 9.3
CP000435_902(CP000435|pid:none) Synechococcus sp. CC9311, comple... 34 9.3
CP000686_3330(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 34 9.3
CP000554_864(CP000554|pid:none) Prochlorococcus marinus str. MIT... 34 9.3
CP000376_64(CP000376|pid:none) Silicibacter sp. TM1040 mega plas... 34 9.3
CP001141_117(CP001141|pid:none) Phaeodactylum tricornutum CCAP 1... 34 9.3
>AJ719700_1(AJ719700|pid:none) Gallus gallus mRNA for hypothetical
protein, clone 5g12.
Length = 381
Score = 216 bits (549), Expect(2) = 3e-99
Identities = 104/199 (52%), Positives = 144/199 (72%)
Frame = +3
Query: 501 GVPIVKAPCEAEAQCAEIVKKGKAWATGSEDMDSLTLGSTVLLRRLFFSEAKKMPILEFE 680
G+P V+AP EAEA CA +VK GK +A +EDMD LT GS VL+R L SEAKK+PI EF
Sbjct: 149 GIPYVEAPGEAEASCATLVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFH 208
Query: 681 LQSVLEGLGLTQDEFIDLSILLGCDYCDSIKGIGPKRAIELIQKHKSLEEVIKHLDKSKY 860
L VL+ LGLT ++F+DL ILLGCDYC+SI+GIGPKRA+ELI++HK++EE+I+H+D KY
Sbjct: 209 LNRVLQDLGLTWEQFVDLCILLGCDYCESIRGIGPKRAVELIKQHKTIEEIIQHIDTKKY 268
Query: 861 PLPEFFPYPEVRELFKNPNVIPADQLPPFQWKDPDVEGLNKFLVEEMGFSDVRVAQGIEK 1040
PLPE + + E ++LF P+VI D + +W +P+ E L +F+ E F++ R+ G+++
Sbjct: 269 PLPENWLHKEAQKLFLEPDVINPDDV-ELKWTEPNEEELVQFMCGEKQFNEERIRNGVKR 327
Query: 1041 LKKFKNTSVQSRMDSFITV 1097
L K + S Q R+D F V
Sbjct: 328 LSKSRQGSTQGRLDDFFKV 346
Score = 171 bits (433), Expect(2) = 3e-99
Identities = 85/150 (56%), Positives = 112/150 (74%)
Frame = +2
Query: 53 MGIKKLTDLIEDNAPTSIKTNILKNYFGRIIAIDASTSLYQFLIAMNADVSSALTNQLGE 232
MGI L LI D AP++I+ N +K+YFGR +AIDAS S+YQFLIA+ + L N+ GE
Sbjct: 1 MGIHGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQG-AEVLQNEEGE 59
Query: 233 TTSHLQGMFYRTIKLISRGIKPIYVFDGSAPVLKSGELAKRQARRKEAKENLKEATEVGT 412
TTSHL GMFYRTI+++ GIKP+YVFDG P LKSGELAKR RR EA+++L+EA E G
Sbjct: 60 TTSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRTERRSEAEKHLQEAQEAGE 119
Query: 413 NEEVQKFAKRVITVTRKQNEDCIKLLTLMG 502
++KF+KR++ VT++ ++C KLL LMG
Sbjct: 120 EANIEKFSKRLVKVTQQHTDECKKLLMLMG 149
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,697,803,465
Number of extensions: 32350387
Number of successful extensions: 93770
Number of sequences better than 10.0: 489
Number of HSP's gapped: 93308
Number of HSP's successfully gapped: 693
Length of query: 411
Length of database: 1,040,966,779
Length adjustment: 131
Effective length of query: 280
Effective length of database: 621,205,444
Effective search space: 173937524320
Effective search space used: 173937524320
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
3 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
4 |
| CH (FL, L) |
0 |
| CF (FL, S) |
1 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |