Contig-U10050-1
Contig ID Contig-U10050-1
Contig update 2002. 9.13
Contig sequence
>Contig-U10050-1 (Contig-U10050-1Q) /CSM_Contig/Contig-U10050-1Q.Seq.d
TGGCCTACTGGAACATTAATATAAAAAGTTTTTTTTAGAATTGTGCAATC
CACAAAAAACAAAAAAAAAAGAATGAAAGTGTTAATTCTTGTATTATTAC
TATTATCATTGAGTGGAGTTTTCACTGGATACACCCCACAATGCAGTTCA
TGTTATTCTGAAGGTCAAAGATGTATGATATTAGATACAAATTCAGGAAC
TTATAAAAATGGTGGAGAATGTAATGATGGATTAGTATGTGCAGCTAAAA
ATAAAGGCGAAGATGAAAAGAATTGGATATGTATGAAACCAATTGAATTG
AATGGAGTTTGTGCAGGTGAGAGTTCATGTGTAATTGGATTAACATGTGA
TCCAGTTGAATTTAAATGTTTAAATTCTAGATTCGCACAAATCGGTGAAA
AATGTTCAAAAGATACAGACTGTTCTGGAACATTAGCATCTTGTACTAAT
AATATTTGTAAATCAGAATCAAGTGGTAAATGTGATGATGCATCAGATTG
TGAATATGGCTCAACTTGTAGTAACAGTTTATGTGTACCATTACGTAAAC
AAGGTGAATCATGTGATTCAATGAAAGGTGAAACATGCATTTACGGCCTC
TCCTGTCTCTCCAACTCTACCTGTGGTCCATTATTCTCAAAACCATTAGG
TGCATCATGTCTAATGGATGATGATTGTAATCAACCTGAAAATTTATATT
GTTCACAAAAATCACATTTATGTGAAGAATATGTTCAACCAAAACAACCA
ACAACAAATTGTAGTTTAACTGAAAATTCATGTGACCAATTCCATGAATG
CTCATGTGATGGTAAATGTTACCAAAGTTCACCATTCCCAACCCAAGTTA
CAAGTGGTATGCAACCATTAGTTAATTGTGTTTTAAAGAATAAATGTACA
TGGGTAACAAACTTTTTCTCATCTGATAGTTGTATAACTAAAAATTGTGC
TTCTGAACTTTGTAAATATAATGGTGTCACAATTATGAATAATGCTTTAA
CATGTGGTAATAATCATCAATCAAATATTTATTGTGCTGATTCAAATTCA
GTTTCAAGAATTAATATTAACAATTCAATGTTATTATTATTATTATTATC
TATTTTATTAATTTTTAATTTTTAAAATAAAAATAAAAATTGATTAATTA
AAATTAAAAAAAAAAAA

Gap no gap
Contig length 1167
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 294867
End point 296023
Strand (PLUS/MINUS) PLUS
Number of clones 11
Number of EST 16
Link to clone list U10050
List of clone(s)

est1=VFK720F,1,415
est2=VFI719F,18,379
est3=CFB371F,22,379
est4=SFI257F,27,388
est5=SFI584E,43,1141
est6=SFK295F,43,574
est7=SSL409F,265,541
est8=SFI257Z,402,1134
est9=VFI719Z,403,1153
est10=CFB371Z,427,1130
est11=VFM526Z,433,1151
est12=VFK720Z,458,1141
est13=SFC234Z,478,1133
est14=VFI819Z,622,1109
est15=VFB550Z,754,1099
est16=SSL409Z,832,1168
Translated Amino Acid sequence
wptgtli*KVFFRIVQSTKNKKKRMKVLILVLLLLSLSGVFTGYTPQCSSCYSEGQRCMI
LDTNSGTYKNGGECNDGLVCAAKNKGEDEKNWICMKPIELNGVCAGESSCVIGLTCDPVE
FKCLNSRFAQIGEKCSKDTDCSGTLASCTNNICKSESSGKCDDASDCEYGSTCSNSLCVP
LRKQGESCDSMKGETCIYGLSCLSNSTCGPLFSKPLGASCLMDDDCNQPENLYCSQKSHL
CEEYVQPKQPTTNCSLTENSCDQFHECSCDGKCYQSSPFPTQVTSGMQPLVNCVLKNKCT
WVTNFFSSDSCITKNCASELCKYNGVTIMNNALTCGNNHQSNIYCADSNSVSRININNSM
LLLLLLSILLIFNF*nknkn*likikkkk


Translated Amino Acid sequence (All Frames)
Frame A:
wptgtli*KVFFRIVQSTKNKKKRMKVLILVLLLLSLSGVFTGYTPQCSSCYSEGQRCMI
LDTNSGTYKNGGECNDGLVCAAKNKGEDEKNWICMKPIELNGVCAGESSCVIGLTCDPVE
FKCLNSRFAQIGEKCSKDTDCSGTLASCTNNICKSESSGKCDDASDCEYGSTCSNSLCVP
LRKQGESCDSMKGETCIYGLSCLSNSTCGPLFSKPLGASCLMDDDCNQPENLYCSQKSHL
CEEYVQPKQPTTNCSLTENSCDQFHECSCDGKCYQSSPFPTQVTSGMQPLVNCVLKNKCT
WVTNFFSSDSCITKNCASELCKYNGVTIMNNALTCGNNHQSNIYCADSNSVSRININNSM
LLLLLLSILLIFNF*nknkn*likikkkk


Frame B:
glleh*ykkfflelcnpqktkkke*kc*flyyyyyh*vefsldtphnavhvilkvkdv*y
*iqiqelikmvenvmmd*yvqlkikakmkrigyv*nqln*mefvqvrvhv*ld*hviqln
lnv*ildshksvknvqkiqtvleh*hlvliifvnqnqvvnvmmhqivnmaqlvvtvyvyh
yvnkvnhviq*kvkhaftaspvsptlpvvhysqnh*vhhv*wmmivinlkiyivhknhiy
vknmfnqnnqqqivv*lkihvtnsmnahvmvnvtkvhhsqpklqvvcnh*livf*rinvh
g*qtfshlivv*lkivllnfvnimvsql*iml*hvviiinqifivliqiqfqeliltiqc
yyyyyylfy*flifkikikid*lklkkk


Frame C:
aywniniksff*ncaihkkqkkknesvnsciitiiiewsfhwihptmqfmlf*rskmydi
rykfrnl*kwwrm**wismcs*k*rrr*keldmyetn*iewslcr*efmcnwinm*ss*i
*mfkf*irtnr*kmfkryrlfwnisily**yl*irikw*m**cirl*iwlnl**qfmcti
t*tr*im*fner*nmhlrpllslqlylwsiilktircimsng**l*st*kfilftkitfm
*ricstkttnnkl*fn*kfm*pip*mlm*w*mlpkftipnpsykwyatis*lcfke*mym
gnklfli**lyn*klcf*tl*i*wchnye*cfnmw**ssikyllc*fkfsfkn*y*qfnv
iiiiiiyfinf*flk*k*klin*n*kkk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U10050-1 (Contig-U10050-1Q)
/CSM_Contig/Contig-U10050-1Q.Seq.d
(1167 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U10050-1 (Contig-U10050-1Q) /CSM_Contig/Conti... 1959 0.0
Contig-U13104-1 (Contig-U13104-1Q) /CSM_Contig/Conti... 38 0.021
Contig-U11875-1 (Contig-U11875-1Q) /CSM_Contig/Conti... 38 0.021
Contig-U11355-1 (Contig-U11355-1Q) /CSM_Contig/Conti... 38 0.021
Contig-U09397-1 (Contig-U09397-1Q) /CSM_Contig/Conti... 38 0.021
Contig-U01792-1 (Contig-U01792-1Q) /CSM_Contig/Conti... 38 0.021
Contig-U01710-1 (Contig-U01710-1Q) /CSM_Contig/Conti... 38 0.021
Contig-U14049-1 (Contig-U14049-1Q) /CSM_Contig/Conti... 36 0.083
Contig-U13982-1 (Contig-U13982-1Q) /CSM_Contig/Conti... 36 0.083
Contig-U11930-1 (Contig-U11930-1Q) /CSM_Contig/Conti... 36 0.083

>Contig-U10050-1 (Contig-U10050-1Q) /CSM_Contig/Contig-U10050-1Q.Seq.d
Length = 1167

Score = 1959 bits (988), Expect = 0.0
Identities = 988/988 (100%)
Strand = Plus / Plus


Query: 71 gaatgaaagtgttaattcttgtattattactattatcattgagtggagttttcactggat 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 gaatgaaagtgttaattcttgtattattactattatcattgagtggagttttcactggat 130


Query: 131 acaccccacaatgcagttcatgttattctgaaggtcaaagatgtatgatattagatacaa 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 acaccccacaatgcagttcatgttattctgaaggtcaaagatgtatgatattagatacaa 190


Query: 191 attcaggaacttataaaaatggtggagaatgtaatgatggattagtatgtgcagctaaaa 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 attcaggaacttataaaaatggtggagaatgtaatgatggattagtatgtgcagctaaaa 250


Query: 251 ataaaggcgaagatgaaaagaattggatatgtatgaaaccaattgaattgaatggagttt 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ataaaggcgaagatgaaaagaattggatatgtatgaaaccaattgaattgaatggagttt 310


Query: 311 gtgcaggtgagagttcatgtgtaattggattaacatgtgatccagttgaatttaaatgtt 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gtgcaggtgagagttcatgtgtaattggattaacatgtgatccagttgaatttaaatgtt 370


Query: 371 taaattctagattcgcacaaatcggtgaaaaatgttcaaaagatacagactgttctggaa 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 taaattctagattcgcacaaatcggtgaaaaatgttcaaaagatacagactgttctggaa 430


Query: 431 cattagcatcttgtactaataatatttgtaaatcagaatcaagtggtaaatgtgatgatg 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 cattagcatcttgtactaataatatttgtaaatcagaatcaagtggtaaatgtgatgatg 490


Query: 491 catcagattgtgaatatggctcaacttgtagtaacagtttatgtgtaccattacgtaaac 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 catcagattgtgaatatggctcaacttgtagtaacagtttatgtgtaccattacgtaaac 550


Query: 551 aaggtgaatcatgtgattcaatgaaaggtgaaacatgcatttacggcctctcctgtctct 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aaggtgaatcatgtgattcaatgaaaggtgaaacatgcatttacggcctctcctgtctct 610


Query: 611 ccaactctacctgtggtccattattctcaaaaccattaggtgcatcatgtctaatggatg 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ccaactctacctgtggtccattattctcaaaaccattaggtgcatcatgtctaatggatg 670


Query: 671 atgattgtaatcaacctgaaaatttatattgttcacaaaaatcacatttatgtgaagaat 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 atgattgtaatcaacctgaaaatttatattgttcacaaaaatcacatttatgtgaagaat 730


Query: 731 atgttcaaccaaaacaaccaacaacaaattgtagtttaactgaaaattcatgtgaccaat 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 atgttcaaccaaaacaaccaacaacaaattgtagtttaactgaaaattcatgtgaccaat 790


Query: 791 tccatgaatgctcatgtgatggtaaatgttaccaaagttcaccattcccaacccaagtta 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 tccatgaatgctcatgtgatggtaaatgttaccaaagttcaccattcccaacccaagtta 850


Query: 851 caagtggtatgcaaccattagttaattgtgttttaaagaataaatgtacatgggtaacaa 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 caagtggtatgcaaccattagttaattgtgttttaaagaataaatgtacatgggtaacaa 910


Query: 911 actttttctcatctgatagttgtataactaaaaattgtgcttctgaactttgtaaatata 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 actttttctcatctgatagttgtataactaaaaattgtgcttctgaactttgtaaatata 970


Query: 971 atggtgtcacaattatgaataatgctttaacatgtggtaataatcatcaatcaaatattt 1030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971 atggtgtcacaattatgaataatgctttaacatgtggtaataatcatcaatcaaatattt 1030


Query: 1031 attgtgctgattcaaattcagtttcaag 1058
||||||||||||||||||||||||||||
Sbjct: 1031 attgtgctgattcaaattcagtttcaag 1058


Score = 58.0 bits (29), Expect = 2e-08
Identities = 45/53 (84%)
Strand = Plus / Plus


Query: 1 tggcctactggaacattaatataaaaagnnnnnnnnagaattgtgcaatccac 53
|||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 tggcctactggaacattaatataaaaagttttttttagaattgtgcaatccac 53


>Contig-U13104-1 (Contig-U13104-1Q) /CSM_Contig/Contig-U13104-1Q.Seq.d
Length = 663

Score = 38.2 bits (19), Expect = 0.021
Identities = 19/19 (100%)
Strand = Plus / Minus


Query: 92 tattattactattatcatt 110
|||||||||||||||||||
Sbjct: 632 tattattactattatcatt 614


Score = 30.2 bits (15), Expect = 5.1
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 92 tattattactattat 106
|||||||||||||||
Sbjct: 227 tattattactattat 213


>Contig-U11875-1 (Contig-U11875-1Q) /CSM_Contig/Contig-U11875-1Q.Seq.d
Length = 2137

Score = 38.2 bits (19), Expect = 0.021
Identities = 19/19 (100%)
Strand = Plus / Minus


Query: 92 tattattactattatcatt 110
|||||||||||||||||||
Sbjct: 841 tattattactattatcatt 823


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,065
Number of Sequences: 6905
Number of extensions: 14065
Number of successful extensions: 1985
Number of sequences better than 10.0: 361
length of query: 1167
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1151
effective length of database: 5,564,391
effective search space: 6404614041
effective search space used: 6404614041
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.18
Homology vs DNA
Query= Contig-U10050-1 (Contig-U10050-1Q) /CSM_Contig/Contig-U10050-1Q.Seq.d
(1167 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ402957) Dictyostelium discoideum cDNA clone:dds18g21, 3' ... 1294 0.0 1
(BJ432223) Dictyostelium discoideum cDNA clone:ddv18f05, 3' ... 1292 0.0 1
(BJ402609) Dictyostelium discoideum cDNA clone:dds17a16, 3' ... 1261 0.0 2
(BJ373566) Dictyostelium discoideum cDNA clone:ddc3n17, 3' e... 1253 0.0 1
(BJ435154) Dictyostelium discoideum cDNA clone:ddv26c07, 3' ... 1233 0.0 1
(BJ433507) Dictyostelium discoideum cDNA clone:ddv22h05, 3' ... 1179 0.0 1
(BJ399291) Dictyostelium discoideum cDNA clone:dds5c10, 3' e... 833 0.0 2
(BJ389455) Dictyostelium discoideum cDNA clone:dds18g21, 5' ... 1019 0.0 1
(BJ390303) Dictyostelium discoideum cDNA clone:dds21m24, 5' ... 963 0.0 1
(BJ432224) Dictyostelium discoideum cDNA clone:ddv18f06, 3' ... 835 0.0 1
(BJ415292) Dictyostelium discoideum cDNA clone:ddv22h05, 5' ... 624 0.0 3
(BJ389093) Dictyostelium discoideum cDNA clone:dds17a16, 5' ... 622 e-174 1
(BJ414099) Dictyostelium discoideum cDNA clone:ddv18f05, 5' ... 571 e-162 2
(BJ359994) Dictyostelium discoideum cDNA clone:ddc3n17, 5' e... 559 e-158 2
(BJ429675) Dictyostelium discoideum cDNA clone:ddv4c13, 3' e... 400 e-156 2
(AU074633) Dictyostelium discoideum slug cDNA, clone SSL409. 476 e-129 1
(AU038730) Dictyostelium discoideum slug cDNA, clone SSL409. 452 e-122 1
(EA686769) Sequence 65648 from patent US 7365185. 44 0.007 3
(BX323451) Zebrafish DNA sequence from clone DKEY-49H9 in li... 54 0.012 1
(AC157048) Bos taurus clone CH240-63P21, WORKING DRAFT SEQUE... 38 0.11 2
(AC172572) Bos taurus clone CH240-232H12, WORKING DRAFT SEQU... 38 0.11 2
(AC165625) Bos taurus clone CH240-167D24, WORKING DRAFT SEQU... 38 0.11 2
(CU469462) Zebrafish DNA sequence from clone DKEY-100O15 in ... 48 0.75 1
(CU302253) Zebrafish DNA sequence from clone DKEY-182M13. 48 0.75 1
(CU181895) Zebrafish DNA sequence from clone CH73-147D22 in ... 48 0.75 1
(CT978957) Zebrafish DNA sequence from clone DKEY-204G14 in ... 48 0.75 1
(CT583647) Zebrafish DNA sequence from clone CH211-145J4 in ... 48 0.75 1
(CT573105) Zebrafish DNA sequence from clone CH73-311K10 in ... 48 0.75 1
(CT033820) Zebrafish DNA sequence from clone CH211-197K14 in... 48 0.75 1
(CR626882) Zebrafish DNA sequence from clone CH211-278B7 in ... 48 0.75 1
(CR450773) Zebrafish DNA sequence from clone DKEY-204N14 in ... 48 0.75 1
(CR293518) Zebrafish DNA sequence from clone CH211-129L10 in... 48 0.75 1
(BX510999) Zebrafish DNA sequence from clone CH211-157P22 in... 48 0.75 1
(BX088564) Zebrafish DNA sequence from clone CH211-239H19 in... 48 0.75 1
(BX005364) Zebrafish DNA sequence from clone DKEY-222L20 in ... 48 0.75 1
(BX005330) Zebrafish DNA sequence from clone CH211-113D13. 48 0.75 1
(BX005085) Zebrafish DNA sequence from clone CH211-225F23 in... 48 0.75 1
(AL928668) Zebrafish DNA sequence from clone CH211-208M1 in ... 48 0.75 1
(AM465992) Vitis vinifera contig VV78X190226.7, whole genome... 48 0.75 1
(CU856355) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.75 1
(CT025891) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.75 1
(CR936198) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.75 1
(CR356232) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.75 1
(EB956867) 9729047 ZF35 Danio rerio cDNA clone 3428760, mRNA... 48 0.75 1
(CT654663) Danio rerio EST, clone ZF_mu_6m22 5'. 48 0.75 1
(CT654630) Danio rerio EST, clone ZF_mu_6l22 5'. 48 0.75 1
(AL731633) Oryza sativa genomic DNA, chromosome 4, BAC clone... 44 0.87 4
(AC097074) Rattus norvegicus clone CH230-43O14, *** SEQUENCI... 40 1.3 3
(CR391975) Zebrafish DNA sequence from clone CH211-276C20 in... 42 1.5 3
(DX983498) SBA010_E21.r Sugar beet BAC library USH20 (Code S... 32 2.0 2
(CU062479) Zebrafish DNA sequence from clone CH211-120F14 in... 44 2.6 5
(CU468951) Zebrafish DNA sequence from clone CH211-282D21 in... 46 3.0 1
(BX511123) Zebrafish DNA sequence from clone DKEY-201I6 in l... 46 3.0 1
(AC090244) Homo sapiens chromosome 18, clone RP11-758N17, co... 46 3.0 1
(AC022884) Homo sapiens chromosome 18, clone RP11-449D8, com... 46 3.0 1
(AC125552) Rattus norvegicus clone CH230-6P23, *** SEQUENCIN... 46 3.0 1
(CU657980) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 3.0 1
(AP002507) Homo sapiens genomic DNA, chromosome 18q11.2 clon... 46 3.0 1
(AC188209) Colobus guereza clone CH272-264F7, WORKING DRAFT ... 46 3.0 1
(AC188207) Colobus guereza clone CH272-173B6, WORKING DRAFT ... 46 3.0 1
(AC018578) Homo sapiens clone RP11-2M16, 2 ordered pieces. 46 3.0 1
(BX129850) Danio rerio genomic clone DKEY-86B18, genomic sur... 46 3.0 1
(AG390693) Mus musculus molossinus DNA, clone:MSMg01-207H14.... 46 3.0 1
(CU928045) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 3.1 5
(BX323866) Zebrafish DNA sequence from clone CH211-278M12 in... 42 4.7 4
(EA633638) Sequence 12517 from patent US 7365185. 44 5.1 2
(CT737139) Zebrafish DNA sequence from clone DKEYP-7C9 in li... 38 5.2 5
(CU896657) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 5.7 4
(BX323029) Zebrafish DNA sequence from clone CH211-261O16. 42 5.8 6
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 36 6.0 7
(AP007916) Lotus japonicus genomic DNA, chromosome 1, clone:... 36 6.5 4
(CS741942) Sequence 9938 from Patent WO2005083127. 38 7.1 4
(BH003114) BMBAC03P20T7_PSU Brugia malayi Genomic Bac Librar... 32 7.6 2
(CU915721) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 7.8 2
(AC194436) Zea mays chromosome 1 clone CH201-152P11; ZMMBBc0... 38 8.7 3
(AC127278) Mus musculus BAC clone RP24-224D24 from chromosom... 38 9.5 6

>(BJ402957) Dictyostelium discoideum cDNA clone:dds18g21, 3' end,
single read.
Length = 734

Score = 1294 bits (653), Expect = 0.0
Identities = 655/656 (99%)
Strand = Plus / Minus


Query: 403 tgttcaaaagatacagactgttctggaacattagcatcttgtactaataatatttgtaaa 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 tgttcaaaagatacagactgttctggaacattagcatcttgtactaataatatttgtaaa 675


Query: 463 tcagaatcaagtggtaaatgtgatgatgcatcagattgtgaatatggctcaacttgtagt 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tcagaatcaagtggtaaatgtgatgatgcatcagattgtgaatatggctcaacttgtagt 615


Query: 523 aacagtttatgtgtaccattacgtaaacaaggtgaatcatgtgattcaatgaaaggtgaa 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aacagtttatgtgtaccattacgtaaacaaggtgaatcatgtgattcaatgaaaggtgaa 555


Query: 583 acatgcatttacggcctctcctgtctctccaactctacctgtggtccattattctcaaaa 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 acatgcatttacggcctctcctgtctctccaactctacctgtggtccattattctcaaaa 495


Query: 643 ccattaggtgcatcatgtctaatggatgatgattgtaatcaacctgaaaatttatattgt 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ccattaggtgcatcatgtctaatggatgatgattgtaatcaacctgaaaatttatattgt 435


Query: 703 tcacaaaaatcacatttatgtgaagaatatgttcaaccaaaacaaccaacaacaaattgt 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tcacaaaaatcacatttatgtgaagaatatgttcaaccaaaacaaccaacaacaaattgt 375


Query: 763 agtttaactgaaaattcatgtgaccaattccatgaatgctcatgtgatggtaaatgttac 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 agtttaactgaaaattcatgtgaccaattccatgaatgctcatgtgatggtaaatgttac 315


Query: 823 caaagttcaccattcccaacccaagttacaagtggtatgcaaccattagttaattgtgtt 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 caaagttcaccattcccaacccaagttacaagtggtatgcaaccattagttaattgtgtt 255


Query: 883 ttaaagaataaatgtacatgggtaacaaactttttctcatctgatagttgtataactaaa 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ttaaagaataaatgtacatgggtaacaaactttttctcatctgatagttgtataactaaa 195


Query: 943 aattgtgcttctgaactttgtaaatataatggtgtcacaattatgaataatgctttaaca 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 aattgtgcttctgaactttgtaaatataatggtgtcacaattatgaataatgctttaaca 135


Query: 1003 tgtggtaataatcatcaatcaaatatttattgtgctgattcaaattcagtttcaag 1058
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 134 tgtggtaataatcatcaatcaaatatttattgtgcngattcaaattcagtttcaag 79

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,241,302,867
Number of extensions: 72830100
Number of successful extensions: 6001084
Number of sequences better than 10.0: 77
Length of query: 1167
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1143
Effective length of database: 97,308,875,965
Effective search space: 111224045227995
Effective search space used: 111224045227995
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.27
Homology vs Protein
Query= Contig-U10050-1 (Contig-U10050-1Q) /CSM_Contig/Contig-U10050-1Q.Seq.d
(1167 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC116977_110(AC116977|pid:none) Dictyostelium discoideum chromos... 132 2e-29
(Q52085) RecName: Full=Cell-cell adhesion glycoprotein 64; ... 89 3e-16
AB079253_1(AB079253|pid:none) Dictyostelium discoideum Dd-gdcA m... 74 1e-11
AC115680_25(AC115680|pid:none) Dictyostelium discoideum chromoso... 73 2e-11
AC115607_13(AC115607|pid:none) Dictyostelium discoideum chromoso... 66 2e-09
(P98157) RecName: Full=Low-density lipoprotein receptor-related ... 63 2e-08
(P41951) RecName: Full=Prion-like-(Q/N-rich) domain-bearing prot... 62 4e-08
CR352252_1(CR352252|pid:none) Zebrafish DNA sequence from clone ... 62 4e-08
U88173_9(U88173|pid:none) Caenorhabditis elegans cosmid F46F11, ... 61 7e-08
BT011327_1(BT011327|pid:none) Drosophila melanogaster SD22390 fu... 60 1e-07
BC140725_1(BC140725|pid:none) Homo sapiens keratin associated pr... 60 1e-07
AC116984_103(AC116984|pid:none) Dictyostelium discoideum chromos... 59 4e-07
U28735_9(U28735|pid:none) Caenorhabditis elegans cosmid F48E3, c... 58 6e-07
(P60409) RecName: Full=Keratin-associated protein 10-7; AltName:... 58 7e-07
(Q07954) RecName: Full=Prolow-density lipoprotein receptor-relat... 58 7e-07
AB209498_1(AB209498|pid:none) Homo sapiens mRNA for low density ... 58 7e-07
X55077_1(X55077|pid:none) H.sapiens mRNA fragment for alpha-2 ma... 58 7e-07
AF369477_1(AF369477|pid:none) Mus musculus strain 129P3/J lipopr... 57 1e-06
DQ812528_1(DQ812528|pid:none) Spironucleus barkhanus isolate Sp1... 57 1e-06
AB076354_1(AB076354|pid:none) Homo sapiens KRTAP18.7 mRNA for ke... 57 1e-06
(Q91ZX7) RecName: Full=Prolow-density lipoprotein receptor-relat... 57 1e-06
AE014297_4237(AE014297|pid:none) Drosophila melanogaster chromos... 57 2e-06
S25111(S25111;S32554) alpha-2-macroglobulin receptor precursor -... 56 2e-06
AC115598_37(AC115598|pid:none) Dictyostelium discoideum chromoso... 55 4e-06
CP001131_2828(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 55 4e-06
(P60368) RecName: Full=Keratin-associated protein 10-2; AltName:... 55 5e-06
AF056116_15(AF056116|pid:none) Fugu rubripes serine/threonine ki... 55 5e-06
(A2ARV4) RecName: Full=Low-density lipoprotein receptor-related ... 54 8e-06
AL844509_613(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 54 8e-06
CP000251_2747(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 54 1e-05
T29764(T29764)hypothetical protein T21E3.3 - Caenorhabditis eleg... 54 1e-05
(Q54C32) RecName: Full=Protein psiQ; Flags: Precursor; 54 1e-05
(Q54VS2) RecName: Full=Protein psiP; Flags: Precursor; 54 1e-05
AJ133651_1(AJ133651|pid:none) Trichoderma harzianum cmp1 gene. 54 1e-05
U28735_10(U28735|pid:none) Caenorhabditis elegans cosmid F48E3, ... 53 2e-05
AC115680_32(AC115680|pid:none) Dictyostelium discoideum chromoso... 52 4e-05
CP000113_5275(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 51 7e-05
(P98158) RecName: Full=Low-density lipoprotein receptor-related ... 51 9e-05
CP000769_2860(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 50 1e-04
AL110498_8(AL110498|pid:none) Caenorhabditis elegans YAC Y64G10A... 50 1e-04
CP000769_2725(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 50 2e-04
AB007026_1(AB007026|pid:none) Dictyostelium discoideum DIA-1 mRN... 50 2e-04
AM746676_2300(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 50 2e-04
Y12539_1(Y12539|pid:none) Branchiostoma floridae mRNA for putati... 50 2e-04
BC131611_1(BC131611|pid:none) Homo sapiens keratin associated pr... 50 2e-04
AB218869_1(AB218869|pid:none) Rhyparobia maderae LpR mRNA for Li... 50 2e-04
AF289202_1(AF289202|pid:none) Caenorhabditis elegans transmembra... 49 3e-04
AM746676_9366(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 49 3e-04
AM055942_182(AM055942|pid:none) Toxoplasma gondii RH, genomic DN... 49 3e-04
AY265358_1(AY265358|pid:none) Homo sapiens glycoprotein receptor... 49 3e-04
L22431_1(L22431|pid:none) Human very low density lipoprotein rec... 49 3e-04
AK295005_1(AK295005|pid:none) Homo sapiens cDNA FLJ61253 complet... 49 3e-04
AY262832_1(AY262832|pid:none) Solenopsis invicta vitellogenin re... 49 3e-04
AC007556_2(AC007556|pid:none) Homo sapiens BAC clone RP11-18C9 f... 49 3e-04
(P98164) RecName: Full=Low-density lipoprotein receptor-related ... 49 3e-04
AL450467_2(AL450467|pid:none) Human DNA sequence from clone RP11... 49 3e-04
AY265357_1(AY265357|pid:none) Homo sapiens glycoprotein receptor... 49 3e-04
(P98155) RecName: Full=Very low-density lipoprotein receptor; ... 49 3e-04
BC048224_1(BC048224|pid:none) Xenopus laevis granulin, mRNA (cDN... 49 3e-04
AB208822_1(AB208822|pid:none) Homo sapiens mRNA for Very low-den... 49 3e-04
BC120950_1(BC120950|pid:none) Homo sapiens keratin associated pr... 49 4e-04
AM746676_7055(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 49 4e-04
(P60370) RecName: Full=Keratin-associated protein 10-5; AltName:... 49 4e-04
CU459119_1(CU459119|pid:none) Zebrafish DNA sequence from clone ... 49 4e-04
AB076352_1(AB076352|pid:none) Homo sapiens KRTAP18.5 mRNA for ke... 49 4e-04
AK049346_1(AK049346|pid:none) Mus musculus ES cells cDNA, RIKEN ... 49 4e-04
AL805948_1(AL805948|pid:none) Mouse DNA sequence from clone RP23... 49 4e-04
(P60412) RecName: Full=Keratin-associated protein 10-11; AltName... 49 4e-04
(Q9JI18) RecName: Full=Low-density lipoprotein receptor-related ... 49 4e-04
EU273942_1(EU273942|pid:none) Amphimedon queenslandica notch mRN... 49 4e-04
CP000113_6723(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 48 6e-04
AL032657_4(AL032657|pid:none) Caenorhabditis elegans YAC Y47H9C,... 48 6e-04
AE014134_308(AE014134|pid:none) Drosophila melanogaster chromoso... 47 0.001
AE014134_309(AE014134|pid:none) Drosophila melanogaster chromoso... 47 0.001
(Q9NZR2) RecName: Full=Low-density lipoprotein receptor-related ... 47 0.001
T25768(T25768)hypothetical protein F46F11.7 - Caenorhabditis ele... 47 0.001
AM746676_988(AM746676|pid:none) Sorangium cellulosum 'So ce 56' ... 47 0.001
BC172897_1(BC172897|pid:none) Synthetic construct Homo sapiens c... 47 0.001
I48952(I48952;S48217) VLDL receptor precursor, long splice form ... 47 0.002
AY331707_1(AY331707|pid:none) Crassostrea virginica metallothion... 47 0.002
T16840(T16840)hypothetical protein T10E10.4 - Caenorhabditis ele... 46 0.002
AM746676_6052(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 46 0.002
AY123118_1(AY123118|pid:none) Griffithsia japonica growth factor... 46 0.002
CP000113_1974(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 46 0.002
AF463419_1(AF463419|pid:none) Naegleria gruberi basal body prote... 46 0.002
AB095016_1(AB095016|pid:none) Cynops pyrrhogaster Notch-1 mRNA f... 46 0.002
BC013622_1(BC013622|pid:none) Mus musculus very low density lipo... 46 0.002
(P98156) RecName: Full=Very low-density lipoprotein receptor; ... 46 0.002
U39644_2(U39644|pid:none) Caenorhabditis elegans cosmid T10E10, ... 46 0.002
AC024830_9(AC024830|pid:none) Caenorhabditis elegans cosmid Y55F... 46 0.003
BC154909_1(BC154909|pid:none) Xenopus tropicalis WNT inhibitory ... 46 0.003
CP000513_277(CP000513|pid:none) Dichelobacter nodosus VCS1703A, ... 45 0.004
BC141361_1(BC141361|pid:none) Mus musculus odd Oz/ten-m homolog ... 45 0.004
AF514281_1(AF514281|pid:none) Oreochromis aureus vitellogenin re... 45 0.004
(Q54C31) RecName: Full=Protein psiR; Flags: Precursor; 45 0.004
(Q8N2E2) RecName: Full=Von Willebrand factor D and EGF domain-co... 45 0.004
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor; 45 0.004
AM746676_5937(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 45 0.004
AF247637_1(AF247637|pid:none) Mus musculus LDLR dan mRNA, comple... 45 0.004
(Q9W6F8) RecName: Full=Wnt inhibitory factor 1; Short=W... 45 0.004
AX367152_1(AX367152|pid:none) Sequence 1 from Patent WO0204599. 45 0.004
AY540953_1(AY540953|pid:none) Strongylocentrotus purpuratus prot... 45 0.005
EF066645_1(EF066645|pid:none) Trichinella spiralis clone T42B12 ... 45 0.005
AM904781_1(AM904781|pid:none) Ministeria vibrans partial mRNA fo... 45 0.005
AK154429_1(AK154429|pid:none) Mus musculus NOD-derived CD11c +ve... 45 0.005
T13171(T13171) probable vitellogenin receptor - fruit fly (Droso... 45 0.005
AL592545_3(AL592545|pid:none) Mouse DNA sequence from clone RP23... 45 0.005
BC104354_1(BC104354|pid:none) Mus musculus predicted gene, ENSMU... 45 0.006
(P13508) RecName: Full=Protein glp-1; Flags: Precursor; &A32901... 45 0.006
AM746676_3301(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 44 0.008
AM270078_56(AM270078|pid:none) Aspergillus niger contig An04c017... 44 0.008
AC008178_1(AC008178|pid:none) Homo sapiens BAC clone RP11-551O2 ... 44 0.008
AF086609_1(AF086609|pid:none) Rattus norvegicus neurestin gamma ... 44 0.008
AL645912_4(AL645912|pid:none) Mouse DNA sequence from clone RP23... 44 0.011
AY627686_1(AY627686|pid:none) Didelphis virginiana megalin mRNA,... 44 0.011
(Q8VI56) RecName: Full=Low-density lipoprotein receptor-related ... 44 0.011
T28674(T28674) alpha-51D-immobilization antigen - Paramecium tet... 44 0.011
AE014298_418(AE014298|pid:none) Drosophila melanogaster chromoso... 44 0.011
DQ482581_1(DQ482581|pid:none) Galleria mellonella lipophorin rec... 44 0.011
AL691489_1(AL691489|pid:none) Mouse DNA sequence from clone RP23... 44 0.011
AE014298_423(AE014298|pid:none) Drosophila melanogaster chromoso... 44 0.011
AE014298_417(AE014298|pid:none) Drosophila melanogaster chromoso... 44 0.011
AE014298_420(AE014298|pid:none) Drosophila melanogaster chromoso... 44 0.011
BC115342_1(BC115342|pid:none) Danio rerio suppression of tumorig... 44 0.011
BC128654_1(BC128654|pid:none) Danio rerio suppression of tumorig... 44 0.011
AY173045_1(AY173045|pid:none) Morone americana vitellogenin rece... 44 0.011
AY123105_1(AY123105|pid:none) Griffithsia japonica crumbs protei... 44 0.011
(Q6IN38) RecName: Full=Wnt inhibitory factor 1; Short=W... 44 0.011
AL138972_3(AL138972|pid:none) Drosophila melanogaster BAC clone ... 44 0.011
AB201473_1(AB201473|pid:none) Bombyx mori LpR3 mRNA for lipophor... 44 0.011
(Q62220) RecName: Full=Keratin-associated protein 5-4; AltName: ... 44 0.011
X96557_1(X96557|pid:none) P.tetraurlia epsilon-51D gene. 44 0.011
AE014298_419(AE014298|pid:none) Drosophila melanogaster chromoso... 44 0.011
(A8MX34) RecName: Full=Putative keratin-associated protein 10-li... 44 0.014
(P60411) RecName: Full=Keratin-associated protein 10-9; AltName:... 44 0.014
AY944632_1(AY944632|pid:none) Aspergillus fumigatus ADAM proteas... 44 0.014
AY845260_1(AY845260|pid:none) Mytilus edulis clone 2 foot protei... 44 0.014
AF016537_1(AF016537|pid:none) Bos taurus very low density lipopr... 44 0.014
AM403063_1(AM403063|pid:none) Blattella germanica mRNA for lipop... 44 0.014
AB201472_1(AB201472|pid:none) Bombyx mori LpR2 mRNA for lipophor... 44 0.014
AB201474_1(AB201474|pid:none) Bombyx mori LpR4 mRNA for lipophor... 44 0.014
AK054663_1(AK054663|pid:none) Homo sapiens cDNA FLJ30101 fis, cl... 44 0.014
AM403064_1(AM403064|pid:none) Blattella germanica mRNA for lipop... 44 0.014
L33417_1(L33417|pid:none) Mus musculus very low density lipoprot... 44 0.014
FN357705_7(FN357705|pid:none) Schistosoma mansoni genome sequenc... 44 0.014
(Q94494) RecName: Full=Protein psiH; Flags: Precursor; &U67940_... 44 0.014
DQ214132_1(DQ214132|pid:none) Taeniopygia guttata clone 0058P005... 43 0.019
(Q25464) RecName: Full=Adhesive plaque matrix protein 2; AltName... 43 0.019
AB209873_1(AB209873|pid:none) Homo sapiens mRNA for notch1 prepr... 43 0.019
BC004048_1(BC004048|pid:none) Mus musculus Wnt inhibitory factor... 43 0.019
AL807828_3(AL807828|pid:none) Mouse DNA sequence from clone RP23... 43 0.019
BC136667_1(BC136667|pid:none) Homo sapiens low density lipoprote... 43 0.019
AB231861_1(AB231861|pid:none) Homo sapiens KIAA0816 mRNA for low... 43 0.019
D85463_1(D85463|pid:none) Mus musculus mRNA for apolipoprotein E... 43 0.019
AB084910_1(AB084910|pid:none) Homo sapiens LRP10 mRNA for low de... 43 0.019
AB384531_1(AB384531|pid:none) Synthetic construct DNA, clone: pF... 43 0.019
A30363(A30363)glycoprotein GP330, renal - rat (fragments) 43 0.019
(Q924X6) RecName: Full=Low-density lipoprotein receptor-related ... 43 0.019
AF159157_1(AF159157|pid:none) Hydra vulgaris head-activator bind... 43 0.019
(P46531) RecName: Full=Neurogenic locus notch homolog protein 1;... 43 0.019
AL627123_1(AL627123|pid:none) Mouse DNA sequence from clone RP23... 43 0.024
(P35953) RecName: Full=Very low-density lipoprotein receptor; ... 43 0.024
(Q9Y5W5) RecName: Full=Wnt inhibitory factor 1; Short=W... 43 0.024
(Q80V70) RecName: Full=Multiple epidermal growth factor-like dom... 43 0.024
CR933353_1(CR933353|pid:none) Mini antigen, Paramecium tetraurel... 43 0.024
CP000769_3723(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 43 0.024
CU638743_587(CU638743|pid:none) Podospora anserina genomic DNA c... 43 0.024
(P60014) RecName: Full=Keratin-associated protein 10-10; AltName... 43 0.024
AK134303_1(AK134303|pid:none) Mus musculus 13 days embryo male t... 43 0.024
T16642(T16642) hypothetical protein R01H2.3 - Caenorhabditis ele... 43 0.024
AP007155_961(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 43 0.024
A59180(A59180) Wnt inhibitory factor-1 - human &AF122922_1(AF12... 43 0.024
AK301818_1(AK301818|pid:none) Homo sapiens cDNA FLJ54458 complet... 43 0.024
BC018037_1(BC018037|pid:none) Homo sapiens WNT inhibitory factor... 43 0.024
AK173032_1(AK173032|pid:none) Mus musculus mRNA for mKIAA0815 pr... 43 0.024
BC058571_1(BC058571|pid:none) Mus musculus multiple EGF-like-dom... 43 0.024
DQ462703_1(DQ462703|pid:none) Bos taurus low density lipoprotein... 42 0.032
FN357705_6(FN357705|pid:none) Schistosoma mansoni genome sequenc... 42 0.032
AP008215_740(AP008215|pid:none) Oryza sativa (japonica cultivar-... 42 0.032
AP005419_8(AP005419|pid:none) Oryza sativa Japonica Group genomi... 42 0.032
AY540956_1(AY540956|pid:none) Lytechinus variegatus soft fertili... 42 0.032
BC149245_1(BC149245|pid:none) Bos taurus similar to CG33196-PB, ... 42 0.032
(Q9DGB9) RecName: Full=Zinc metalloproteinase-disintegrin VAP1; ... 42 0.032
(P35555) RecName: Full=Fibrillin-1; Flags: Precursor; &L13923_1... 42 0.032
X63556_1(X63556|pid:none) H.sapiens mRNA for fibrillin. 42 0.032
EU024890_1(EU024890|pid:none) Penaeus monodon vitellogenin recep... 42 0.032
BC108458_1(BC108458|pid:none) Xenopus laevis hypothetical protei... 42 0.032
DQ004683_1(DQ004683|pid:none) Xenopus laevis granulin 2 mRNA, co... 42 0.032
BC073022_1(BC073022|pid:none) Xenopus laevis hypothetical protei... 42 0.032
FN357705_5(FN357705|pid:none) Schistosoma mansoni genome sequenc... 42 0.032
FJ501956_1(FJ501956|pid:none) Oryza sativa Indica Group keratin ... 42 0.032
AC117072_61(AC117072|pid:none) Dictyostelium discoideum chromoso... 42 0.032
(Q9WTS5) RecName: Full=Teneurin-2; Short=Ten-2; AltName... 42 0.042
AF387318_1(AF387318|pid:none) Gallus gallus slit-3 mRNA, partial... 42 0.042
AB001327_1(AB001327|pid:none) Halocynthia roretzi mRNA for HrNot... 42 0.042
BC104355_1(BC104355|pid:none) Mus musculus keratin associated pr... 42 0.042
AF283256_1(AF283256|pid:none) Homo sapiens serine protease SNC19... 42 0.042
AY142135_1(AY142135|pid:none) Giardia intestinalis isolate WB cl... 42 0.042
(Q9Y5Y6) RecName: Full=Suppressor of tumorigenicity protein 14; ... 42 0.042
CP001328_607(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 42 0.042
T27283(T27283)hypothetical protein Y64G10A.f - Caenorhabditis el... 42 0.042
AK314173_1(AK314173|pid:none) Homo sapiens cDNA, FLJ94888, highl... 42 0.042
AE014297_4006(AE014297|pid:none) Drosophila melanogaster chromos... 42 0.054
AB031297_1(AB031297|pid:none) Sarcophaga peregrina mRNA for 120-... 42 0.054
AF016687_11(AF016687|pid:none) Caenorhabditis elegans cosmid T21... 42 0.054
AP007166_484(AP007166|pid:none) Aspergillus oryzae RIB40 genomic... 42 0.054
AM502222_18(AM502222|pid:none) Leishmania infantum chromosome 4. 42 0.054
AE014297_4004(AE014297|pid:none) Drosophila melanogaster chromos... 42 0.054
BT059468_1(BT059468|pid:none) Salmo salar clone ssal-rgf-530-199... 42 0.054
A35844(A35844)Xotch protein - African clawed frog 42 0.054
(P21783) RecName: Full=Neurogenic locus notch protein homolog; ... 42 0.054
AL034559_42(AL034559|pid:none) Plasmodium falciparum MAL3P7, com... 42 0.054
BT045649_1(BT045649|pid:none) Salmo salar clone ssal-rgf-527-290... 42 0.054
AF245040_1(AF245040|pid:none) Rattus norvegicus substrate bindin... 41 0.071
BT011063_1(BT011063|pid:none) Drosophila melanogaster LD21010 fu... 41 0.071
AB169715_1(AB169715|pid:none) Macaca fascicularis brain cDNA, cl... 41 0.071
AB209707_1(AB209707|pid:none) Homo sapiens mRNA for low density ... 41 0.071
AF230275_1(AF230275|pid:none) Giardia intestinalis isolate Ad-1 ... 41 0.071
EU190436_1(EU190436|pid:none) Mus musculus transmembrane serine ... 41 0.071
AM050637_1(AM050637|pid:none) Blattella germanica mRNA for vitel... 41 0.071
D88633(D88633)protein F56B3.2 [imported] - Caenorhabditis elegans 41 0.071
BX510920_1(BX510920|pid:none) Zebrafish DNA sequence from clone ... 41 0.071
DQ103506_1(DQ103506|pid:none) Dermacentor variabilis vitellogeni... 41 0.071
AK295878_1(AK295878|pid:none) Homo sapiens cDNA FLJ50970 complet... 41 0.071
AF283408_1(AF283408|pid:none) Homo sapiens candidate tumor suppr... 41 0.071
EU190437_1(EU190437|pid:none) Mus musculus transmembrane serine ... 41 0.071
(P11976) RecName: Full=Prestalk protein; AltName: Full=Extracell... 41 0.071
AC068195_1(AC068195|pid:none) Homo sapiens BAC clone RP11-114B24... 41 0.071
EF613220_1(EF613220|pid:none) Camelus bactrianus integrin beta-6... 41 0.071
A26838(A26838)prestalk protein precursor - slime mold (Dictyoste... 41 0.071
(Q9IAT6) RecName: Full=Delta-like protein C; Short=Delt... 41 0.071
AB264317_1(AB264317|pid:none) Dorcus curvidens binodulosus dcbAF... 41 0.093
(Q95209) RecName: Full=Sortilin-related receptor; AltName: Full=... 41 0.093
AJ879619_2(AJ879619|pid:none) Solea senegalensis mRNA for very l... 41 0.093
AJ879619_1(AJ879619|pid:none) Solea senegalensis mRNA for very l... 41 0.093
AB006906_1(AB006906|pid:none) Xenopus laevis mRNA for vitellogen... 41 0.093
EU733638_1(EU733638|pid:none) Crotalus durissus cascavella crota... 41 0.093
BC169959_1(BC169959|pid:none) Xenopus laevis a disintegrin and m... 41 0.093
AB073215_1(AB073215|pid:none) Rattus norvegicus SLIT1 mRNA for S... 41 0.093
BX293980_512(BX293980|pid:none) Mycoplasma mycoides subsp. mycoi... 41 0.093
BC172899_1(BC172899|pid:none) Synthetic construct Homo sapiens c... 41 0.093
AE013599_3495(AE013599|pid:none) Drosophila melanogaster chromos... 41 0.093
AJ245710_1(AJ245710|pid:none) Mus musculus partial mRNA for tene... 41 0.093
BC071077_1(BC071077|pid:none) Xenopus laevis suppression of tumo... 41 0.093
BC169957_1(BC169957|pid:none) Xenopus laevis a disintegrin and m... 41 0.093
S82451_1(S82451|pid:none) latent transforming growth factor-beta... 40 0.12
(O13766) RecName: Full=Zinc metalloprotease mde10; EC=3... 40 0.12
AY027889_1(AY027889|pid:none) Aedes aegypti vitellogenin recepto... 40 0.12
AF051401_1(AF051401|pid:none) Caenorhabditis elegans fibulin-1 i... 40 0.12
(P35950) RecName: Full=Low-density lipoprotein receptor; ... 40 0.12
AE014296_356(AE014296|pid:none) Drosophila melanogaster chromoso... 40 0.12
(Q61810) RecName: Full=Latent-transforming growth factor beta-bi... 40 0.12
AF045646_3(AF045646|pid:none) Caenorhabditis elegans cosmid F56B... 40 0.12
DQ900937_1(DQ900937|pid:none) Ciona intestinalis gamma-carboxygl... 40 0.12
AL389894_18(AL389894|pid:none) Leishmania major Friedlin chromos... 40 0.12
QRRTLD(S03430;S05076;B48908)LDL receptor precursor - rat 40 0.12
A99214_1(A99214|pid:none) Sequence 15 from Patent WO9907856. &A... 40 0.12
BC047187_1(BC047187|pid:none) Danio rerio very low density lipop... 40 0.12
AK004939_1(AK004939|pid:none) Mus musculus adult male liver cDNA... 40 0.12
AB304798_1(AB304798|pid:none) Marsupenaeus japonicus mRNA for pu... 40 0.12
BC078659_1(BC078659|pid:none) Homo sapiens latent transforming g... 40 0.12
AL035436_2(AL035436|pid:none) Drosophila melanogaster cosmid clo... 40 0.12
(Q9QUN9) RecName: Full=Dickkopf-related protein 3; Shor... 40 0.12
(Q90ZI3) RecName: Full=Zinc metalloproteinase-disintegrin HV1; ... 40 0.12
AB209865_1(AB209865|pid:none) Homo sapiens mRNA for latent trans... 40 0.12
AE014297_4008(AE014297|pid:none) Drosophila melanogaster chromos... 40 0.12
BC057674_1(BC057674|pid:none) Mus musculus transmembrane serine ... 40 0.12
AB037898_1(AB037898|pid:none) Rattus norvegicus MBSP mRNA for me... 40 0.12
L14815_1(L14815|pid:none) Entamoeba histolytica HM-1:IMSS galact... 40 0.12
AK296312_1(AK296312|pid:none) Homo sapiens cDNA FLJ50552 complet... 40 0.16
A47648(A47648)perlecan homolog unc-52, form 1 precursor - Caenor... 40 0.16
(Q9UKF2) RecName: Full=Disintegrin and metalloproteinase domain-... 40 0.16
(Q9R159) RecName: Full=Disintegrin and metalloproteinase domain-... 40 0.16
(Q0IIH7) RecName: Full=Suppressor of tumorigenicity protein 14; ... 40 0.16
BC124937_1(BC124937|pid:none) Xenopus laevis hypothetical protei... 40 0.16
(O88799) RecName: Full=Zonadhesin; Flags: Precursor; &T42215(T4... 40 0.16
DQ894112_1(DQ894112|pid:none) Synthetic construct Homo sapiens c... 40 0.16
AF308602_1(AF308602|pid:none) Homo sapiens NOTCH 1 (N1) mRNA, co... 40 0.16
BC028372_1(BC028372|pid:none) Homo sapiens ADAM metallopeptidase... 40 0.16
C88369(C88369;E88369) protein unc-52 [imported] - Caenorhabditis... 40 0.16
AE014297_3999(AE014297|pid:none) Drosophila melanogaster chromos... 40 0.16
AF171932_1(AF171932|pid:none) Homo sapiens metallaproteinase-dis... 40 0.16
CP000113_4822(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 40 0.16
F88369(F88369) protein unc-52 [imported] - Caenorhabditis elegan... 40 0.16
CP000769_3327(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 40 0.16
(P60369) RecName: Full=Keratin-associated protein 10-3; AltName:... 40 0.16
Z93375_7(Z93375|pid:none) Caenorhabditis elegans Cosmid C38C6, c... 40 0.16
(Q7RTY8) RecName: Full=Transmembrane protease, serine 7; ... 40 0.16
(P35952) RecName: Full=Low-density lipoprotein receptor; ... 40 0.16
DQ205405_1(DQ205405|pid:none) Tenebrio molitor thermal hysteresi... 40 0.16
(Q5FC62) RecName: Full=Uncharacterized protein C35A5.10; &Z7118... 40 0.16
AK131211_1(AK131211|pid:none) Homo sapiens cDNA FLJ16088 fis, cl... 40 0.16
EU127454_1(EU127454|pid:none) Homo sapiens mucin 5AC, oligomeric... 40 0.16
DQ310728_1(DQ310728|pid:none) Xenopus laevis fibrillin mRNA, par... 40 0.16
AF070477_1(AF070477|pid:none) Caenorhabditis elegans fibulin-1D ... 40 0.16
AB073214_1(AB073214|pid:none) Rattus norvegicus SLIT1 mRNA for S... 40 0.16
AX817295_1(AX817295|pid:none) Sequence 43 from Patent WO02081517. 40 0.21
CR860771_1(CR860771|pid:none) Pongo abelii mRNA; cDNA DKFZp459H0... 40 0.21
BC145488_1(BC145488|pid:none) Mus musculus slit homolog 2 (Droso... 40 0.21
AX207903_1(AX207903|pid:none) Sequence 7 from Patent WO0157194. 40 0.21
AF003521_1(AF003521|pid:none) Homo sapiens Jagged 2 mRNA, comple... 40 0.21
AX817297_1(AX817297|pid:none) Sequence 45 from Patent WO02081517. 40 0.21
AF160494_1(AF160494|pid:none) Tenebrio molitor thermal hysteresi... 40 0.21
CP001326_59(CP001326|pid:none) Micromonas sp. RCC299 chromosome ... 40 0.21
AK221695_1(AK221695|pid:none) Arabidopsis thaliana mRNA for puta... 40 0.21
BC059267_1(BC059267|pid:none) Mus musculus slit homolog 2 (Droso... 40 0.21
(Q9R1B9) RecName: Full=Slit homolog 2 protein; Short=Sl... 40 0.21
(Q86HT1) RecName: Full=Protein psiL; Flags: Precursor; &AC11695... 40 0.21
AE014297_1645(AE014297|pid:none) Drosophila melanogaster chromos... 40 0.21
AF029778_1(AF029778|pid:none) Homo sapiens Jagged2 (JAG2) mRNA, ... 40 0.21
(O88279) RecName: Full=Slit homolog 1 protein; Short=Sl... 40 0.21
BC145487_1(BC145487|pid:none) Mus musculus slit homolog 2 (Droso... 40 0.21
AF029779_1(AF029779|pid:none) Homo sapiens hJAG2.del-E6 (JAG2) m... 40 0.21
AF020201_1(AF020201|pid:none) Homo sapiens Jagged 2 mRNA, comple... 40 0.21
Y14330_1(Y14330|pid:none) Homo sapiens partial mRNA for jagged2 ... 40 0.21
AB159785_1(AB159785|pid:none) Aspergillus oryzae csnC gene for c... 40 0.21
T22793(T22793;T24489)hypothetical protein F56H11.1 - Caenorhabdi... 39 0.27
(Q19673) RecName: Full=Putative tyrosinase-like protein tyr-3; F... 39 0.27
EF133884_1(EF133884|pid:none) Alexandrium fundyense strain GT-CA... 39 0.27
CP000113_6200(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 39 0.27
AY331704_1(AY331704|pid:none) Crassostrea virginica metallothion... 39 0.27
(Q99088) RecName: Full=Low-density lipoprotein receptor 2; ... 39 0.27
AF275314_1(AF275314|pid:none) Trichosurus vulpecula whey acidic ... 39 0.27
Z81110_2(Z81110|pid:none) Caenorhabditis elegans Cosmid T01D3, c... 39 0.27
AY289606_1(AY289606|pid:none) Danio rerio progranulin-b mRNA, co... 39 0.27
(P60410) RecName: Full=Keratin-associated protein 10-8; AltName:... 39 0.27
BC096854_1(BC096854|pid:none) Danio rerio granulin b, mRNA (cDNA... 39 0.27
BC147871_1(BC147871|pid:none) Bos taurus dickkopf homolog 3 (Xen... 39 0.27
U57753_1(U57753|pid:none) Strongylocentrotus purpuratus SFE1 mRN... 39 0.27
(Q9N0L8) RecName: Full=Whey acidic protein; AltName: Full=tWAP; ... 39 0.27
AY173044_1(AY173044|pid:none) Oncorhynchus mykiss latent transfo... 39 0.27
T22945(T22945;T24295)hypothetical protein T01D3.1 - Caenorhabdit... 39 0.27
AL022314_6(AL022314|pid:none) Human DNA sequence from clone RP5-... 39 0.27
AB264318_1(AB264318|pid:none) Dorcus curvidens binodulosus dcbAF... 39 0.35
AK122555_1(AK122555|pid:none) Mus musculus mRNA for mKIAA1781 pr... 39 0.35
S28291(S28291)hypothetical protein ZC84.1 - Caenorhabditis elegans 39 0.35
(Q80T91) RecName: Full=Multiple epidermal growth factor-like dom... 39 0.35
DQ917572_1(DQ917572|pid:none) Parhyale hawaiensis notch protein ... 39 0.35
DQ229127_1(DQ229127|pid:none) Tenebrio molitor antifreeze protei... 39 0.35
AE014297_4001(AE014297|pid:none) Drosophila melanogaster chromos... 39 0.35
FJ188469_1(FJ188469|pid:none) Gallus gallus disintegrin and meta... 39 0.35
(O73791) RecName: Full=Tyrosine-protein kinase receptor Tie-2; ... 39 0.35
AF375477_1(AF375477|pid:none) Danio rerio granulin-A precursor, ... 39 0.35
AL591496_16(AL591496|pid:none) Mouse DNA sequence from clone RP2... 39 0.35
AF074960_1(AF074960|pid:none) Mus musculus neurogenic extracellu... 39 0.35
BC082854_1(BC082854|pid:none) Xenopus laevis hypothetical LOC494... 39 0.35
AK220505_1(AK220505|pid:none) Mus musculus mRNA for mKIAA4141 pr... 39 0.35
Z75190_1(Z75190|pid:none) H.sapiens mRNA for apolipoprotein E re... 39 0.35
AF355595_1(AF355595|pid:none) Aedes aegypti lipophorin receptor ... 39 0.35
(A8MTY7) RecName: Full=Putative keratin-associated protein 9-2-l... 39 0.35
AM910990_169(AM910990|pid:none) Plasmodium knowlesi strain H chr... 39 0.35
AE014297_4000(AE014297|pid:none) Drosophila melanogaster chromos... 39 0.35
BX890618_1(BX890618|pid:none) Zebrafish DNA sequence from clone ... 39 0.35
AB232525_1(AB232525|pid:none) Sus scrofa DKK3 mRNA for dickkopf ... 39 0.35
AF315555_1(AF315555|pid:none) Caenorhabditis briggsae notch-like... 39 0.35
AL591496_15(AL591496|pid:none) Mouse DNA sequence from clone RP2... 39 0.35
CR760336_1(CR760336|pid:none) Xenopus tropicalis finished cDNA, ... 39 0.35
BX088690_1(BX088690|pid:none) Zebrafish DNA sequence from clone ... 39 0.35
CP001131_2569(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 39 0.35
AY348869_1(AY348869|pid:none) Aedes aegypti lipophorin receptor ... 39 0.35
AK051642_1(AK051642|pid:none) Mus musculus 12 days embryo spinal... 39 0.35
AY587550_1(AY587550|pid:none) Homo sapiens putative tumor suppre... 39 0.46
AF055585_1(AF055585|pid:none) Homo sapiens neurogenic extracellu... 39 0.46
AL022270_3(AL022270|pid:none) Caenorhabditis elegans Cosmid C26G... 39 0.46
AM746676_9116(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 39 0.46
CP001359_3295(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 39 0.46
AF179413_1(AF179413|pid:none) Dendroides canadensis antifreeze p... 39 0.46
DQ229114_1(DQ229114|pid:none) Tenebrio molitor antifreeze protei... 39 0.46
AE014296_2190(AE014296|pid:none) Drosophila melanogaster chromos... 39 0.46
CU138540_8(CU138540|pid:none) Zebrafish DNA sequence from clone ... 39 0.46
BC151354_1(BC151354|pid:none) Bos taurus latent transforming gro... 39 0.46
(O94813) RecName: Full=Slit homolog 2 protein; Short=Sl... 39 0.46
BC143978_1(BC143978|pid:none) Homo sapiens slit homolog 2 (Droso... 39 0.46
Y18468_1(Y18468|pid:none) Suberites domuncula mRNA for integrin ... 39 0.46
AK153375_1(AK153375|pid:none) Mus musculus bone marrow macrophag... 39 0.46
AB015790_1(AB015790|pid:none) Mus musculus mRNA for LR11, comple... 39 0.46
CP001131_3213(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 39 0.46
FJ222591_1(FJ222591|pid:none) Periplaneta americana Notch protei... 39 0.46
AF283374_1(AF283374|pid:none) Homo sapiens candidate tumor suppr... 39 0.46
AJ291489_1(AJ291489|pid:none) Paracentrotus lividus mRNA for fib... 39 0.46
AF133730_1(AF133730|pid:none) Rattus norvegicus Slit1 mRNA, comp... 39 0.46
AY553633_1(AY553633|pid:none) Paramecium primaurelia surface ant... 39 0.46
L36118_1(L36118|pid:none) Chiloscyllium plagiosum low-density li... 39 0.46
L10986_13(L10986|pid:none) Caenorhabditis elegans cosmid F10E9, ... 39 0.46
CP000251_3326(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 39 0.46
AF539862_1(AF539862|pid:none) Hydra vulgaris nematocyst outer wa... 39 0.46
DQ234058_1(DQ234058|pid:none) Tenebrio molitor thermal hysteresi... 38 0.60
CR859669_1(CR859669|pid:none) Pongo abelii mRNA; cDNA DKFZp459C0... 38 0.60
BC162468_1(BC162468|pid:none) Danio rerio jagged 1a, mRNA (cDNA ... 38 0.60
(Q8JIY1) RecName: Full=Disintegrin and metalloproteinase domain-... 38 0.60
S28358(S28358;S20090) prespore vesicle protein - slime mold (Dic... 38 0.60
AE014298_2386(AE014298|pid:none) Drosophila melanogaster chromos... 38 0.60
BT059209_1(BT059209|pid:none) Salmo salar clone ssal-rgf-532-249... 38 0.60
U67854_1(U67854|pid:none) Salvelinus fontinalis ovulatory protei... 38 0.60
AK137635_1(AK137635|pid:none) Mus musculus adult female vagina c... 38 0.60
(Q9W6F9) RecName: Full=Wnt inhibitory factor 1; Short=W... 38 0.60
AF501273_1(AF501273|pid:none) Entamoeba histolytica clone C1 Gal... 38 0.60
AF410799_1(AF410799|pid:none) Mus musculus latent transforming g... 38 0.60
(P08798) RecName: Full=Prespore vesicle protein; Short=... 38 0.60
BC141005_1(BC141005|pid:none) Mus musculus latent transforming g... 38 0.60
AY331705_1(AY331705|pid:none) Crassostrea virginica metallothion... 38 0.60
U42830_5(U42830|pid:none) Caenorhabditis elegans cosmid C53B7, c... 38 0.60
BC119785_1(BC119785|pid:none) Mus musculus latent transforming g... 38 0.60
I38467(I38467)low density lipoprotein-related protein 2 - human ... 38 0.60
CP000113_4733(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 38 0.60
BT046152_1(BT046152|pid:none) Drosophila melanogaster IP21864 fu... 38 0.60
BC084953_1(BC084953|pid:none) Xenopus laevis X-Serrate-1 protein... 38 0.60
Z83743_1(Z83743|pid:none) G.duodenalis gene encoding variant-spe... 38 0.60
(Q61554) RecName: Full=Fibrillin-1; Flags: Precursor; &A55624(A... 38 0.60
(P60331) RecName: Full=Keratin-associated protein 10-1; AltName:... 38 0.60
AF214523_1(AF214523|pid:none) Drosophila melanogaster SP460 mRNA... 38 0.60
BX004766_1(BX004766|pid:none) Zebrafish DNA sequence from clone ... 38 0.60
AM746676_2916(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 38 0.60
AK150125_1(AK150125|pid:none) Mus musculus bone marrow macrophag... 38 0.60
AF135253_1(AF135253|pid:none) Mus musculus fibulin-2 (Fbln2) gen... 38 0.60
AK168688_1(AK168688|pid:none) Mus musculus 17 days embryo stomac... 38 0.60
AY204471_3(AY204471|pid:none) Myxococcus xanthus C1260 adventuro... 38 0.60
BC163889_1(BC163889|pid:none) Danio rerio jagged 2, mRNA (cDNA c... 38 0.60
(O88307) RecName: Full=Sortilin-related receptor; AltName: Full=... 38 0.60
Y12004_1(Y12004|pid:none) M.musculus mRNA for receptor LR11/gp25... 38 0.60
(P37889) RecName: Full=Fibulin-2; Short=FIBL-2; Flags: ... 38 0.60
AF229450_1(AF229450|pid:none) Danio rerio jagged2 (jag2) mRNA, c... 38 0.60
AM746676_2058(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 38 0.60
AF090432_1(AF090432|pid:none) Danio rerio serrateB mRNA, complet... 38 0.60
AM746676_8717(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 38 0.60
(Q9WTS6) RecName: Full=Teneurin-3; Short=Ten-3; AltName... 38 0.60
M16152_1(M16152|pid:none) Drosophila melanogaster Notch growth f... 38 0.60
AM746676_4982(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 38 0.60
U40410_2(U40410|pid:none) Caenorhabditis elegans cosmid C54G7, c... 38 0.60
AK159361_1(AK159361|pid:none) Mus musculus osteoclast-like cell ... 38 0.60
AK147303_1(AK147303|pid:none) Mus musculus adult male brain UNDE... 38 0.60
T28802(T28802) hypothetical protein C53B7.3 - Caenorhabditis ele... 38 0.60
S55060(S55060) fertilin alpha-II - crab-eating macaque &X79809_... 38 0.79
CR382131_230(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 38 0.79
Y15520_1(Y15520|pid:none) Papio hamadryas anubis gene encoding f... 38 0.79
AY880436_1(AY880436|pid:none) Gekko japonicus GekBS205P mRNA, co... 38 0.79
BC125837_1(BC125837|pid:none) Danio rerio suppression of tumorig... 38 0.79
AB041857_1(AB041857|pid:none) Ciona intestinalis mRNA for Ci-MET... 38 0.79
Z98877_8(Z98877|pid:none) Caenorhabditis elegans YAC Y69H2, comp... 38 0.79
AK295090_1(AK295090|pid:none) Homo sapiens cDNA FLJ50960 complet... 38 0.79
AK297918_1(AK297918|pid:none) Homo sapiens cDNA FLJ57405 complet... 38 0.79
BC013197_1(BC013197|pid:none) Homo sapiens delta-like 1 homolog ... 38 0.79
CP001324_318(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 38 0.79
BC161739_1(BC161739|pid:none) Xenopus tropicalis dickkopf 3, mRN... 38 0.79
BC091959_1(BC091959|pid:none) Danio rerio wnt inhibitory factor ... 38 0.79
CP001131_3388(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 38 0.79
AF065168_1(AF065168|pid:none) Giardia intestinalis variant-speci... 38 0.79
AM746676_5037(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 38 0.79
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor; 38 0.79
E88571(E88571)protein C05B5.5 [imported] - Caenorhabditis elegans 38 0.79
S43572(S43572)C05B5.5 protein (clone C05B5) - Caenorhabditis ele... 38 0.79
CP001359_3451(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 38 0.79
AB287423_1(AB287423|pid:none) Entamoeba dispar igl1 mRNA for int... 38 0.79
BC007741_1(BC007741|pid:none) Homo sapiens delta-like 1 homolog ... 38 0.79
BC076994_1(BC076994|pid:none) Xenopus tropicalis MGC89623 protei... 38 0.79
Y15519_1(Y15519|pid:none) Papio hamadryas anubis gene encoding f... 38 0.79
AY255004_1(AY255004|pid:none) Bothrops jararacussu metalloprotea... 38 0.79
U73710_1(U73710|pid:none) Entamoeba dispar Gal/GalNAc-inhibitabl... 38 0.79
AB169907_1(AB169907|pid:none) Macaca fascicularis brain cDNA, cl... 38 0.79
(P97607) RecName: Full=Protein jagged-2; Short=Jagged2;... 38 0.79
AK302589_1(AK302589|pid:none) Homo sapiens cDNA FLJ51150 complet... 38 0.79
AL050348_3(AL050348|pid:none) Human DNA sequence from clone RP3-... 38 0.79
AK289384_1(AK289384|pid:none) Homo sapiens cDNA FLJ78166 complet... 38 0.79
(Q8IUB2) RecName: Full=WAP four-disulfide core domain protein 3;... 38 0.79
CT033758_4(CT033758|pid:none) Mouse DNA sequence from clone RP23... 37 1.0
AF007248_1(AF007248|pid:none) Mus musculus mutant fibrillin-1 (F... 37 1.0
DQ234274_1(DQ234274|pid:none) Tenebrio molitor THP isoform 84aa-... 37 1.0
DQ017081_1(DQ017081|pid:none) Homo sapiens secredeltin (DLK1) mR... 37 1.0
AK164949_1(AK164949|pid:none) Mus musculus 0 day neonate lung cD... 37 1.0
BC146386_1(BC146386|pid:none) Synthetic construct Homo sapiens c... 37 1.0
EU972808_1(EU972808|pid:none) Zea mays clone 388422 unknown mRNA. 37 1.0
(O75095) RecName: Full=Multiple epidermal growth factor-like dom... 37 1.0
(A5A6P5) RecName: Full=Keratin-associated protein 9-2; AltName: ... 37 1.0
(Q5BK84) RecName: Full=Disintegrin and metalloproteinase domain-... 37 1.0
FN357489_4(FN357489|pid:none) Schistosoma mansoni genome sequenc... 37 1.0
(Q2LD49) RecName: Full=Zinc metalloproteinase-disintegrin TSV-DM... 37 1.0
JC7188(JC7188)REIC protein - human 37 1.0
BC149826_1(BC149826|pid:none) Bos taurus keratin associated prot... 37 1.0
AL590992_1(AL590992|pid:none) Mouse DNA sequence from clone RP23... 37 1.0
(A8MXZ3) RecName: Full=Putative keratin-associated protein 9-2-l... 37 1.0
AM114769_1(AM114769|pid:none) Platynereis dumerilii partial mRNA... 37 1.0
AB264320_1(AB264320|pid:none) Dorcus curvidens binodulosus dcbAF... 37 1.0
AF135059_1(AF135059|pid:none) Rattus norvegicus fibrillin-1 mRNA... 37 1.0
CU928180_533(CU928180|pid:none) Kluyveromyces thermotolerans str... 37 1.0
A23475(A23475)G surface protein - Paramecium primaurelia 37 1.0
AF159114_1(AF159114|pid:none) Tenebrio molitor thermal hysteresi... 37 1.0
AM746676_392(AM746676|pid:none) Sorangium cellulosum 'So ce 56' ... 37 1.0
BT011026_1(BT011026|pid:none) Drosophila melanogaster RE46519 fu... 37 1.0
(P59222) RecName: Full=Scavenger receptor class F member 2; AltN... 37 1.0
BC094612_1(BC094612|pid:none) Mus musculus latent transforming g... 37 1.0
(Q8CIR0) RecName: Full=Latent-transforming growth factor beta-bi... 37 1.0
BC091093_1(BC091093|pid:none) Xenopus tropicalis GRN protein, mR... 37 1.0
DQ334201_1(DQ334201|pid:none) Drosophila miranda CG6947 gene, pa... 37 1.0
A27020(A27020)DIF-induced prestalk pDd63 protein precursor - sli... 37 1.0
FB300273_1(FB300273|pid:none) Sequence 1 from Patent EP1852507. 37 1.0
AB035182_1(AB035182|pid:none) Homo sapiens DKK-3 gene for Dickko... 37 1.0
T22274(T22274)hypothetical protein F46B3.9 - Caenorhabditis eleg... 37 1.0
AB011539_1(AB011539|pid:none) Homo sapiens mRNA for MEGF6 protei... 37 1.0
AM746676_1040(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 37 1.0
(P15215) RecName: Full=Laminin subunit gamma-1; AltName: Full=La... 37 1.0

>AC116977_110(AC116977|pid:none) Dictyostelium discoideum chromosome
2 map 5515173-5817331 strain AX4, complete sequence.
Length = 350

Score = 132 bits (333), Expect = 2e-29
Identities = 88/285 (30%), Positives = 130/285 (45%), Gaps = 14/285 (4%)
Frame = +1

Query: 136 PQCSSCYSEGQRCMILDTNSGTYKNGGECNDGLVCAAKNKGEDEKNWICMKPIELNGVCA 315
P+C C EG+ C+ + +K G C+DGL+C + E EK ++C++P C
Sbjct: 26 PKCFKCLKEGEECV-----TDGFKIGS-CSDGLICGSDPNNEFEK-YVCIQPKRYGESCV 78

Query: 316 GESSCVIGLTCDPVEFKCLNSRFAQIGEKCSKDTDCSGTL--ASCTNNICKSESSGKCDD 489
S C IGL C +C N RF+ +GE+CS+D DCS + SC + CK +S+ C
Sbjct: 79 DSSVCDIGLLCSEAN-QCDNIRFSSVGEQCSRDQDCSLGVDKVSCIDGFCKLKSN-TCTS 136

Query: 490 ASDCEYGSTCSNSLCVPLRKQGESCDSMKGETCIYGLSCLSNSTCGPLFSKPLGASCLMD 669
++C+ G C +S CV + +SC S C +S L +C +
Sbjct: 137 DNECQGGFACVDSQCVYSIQLNQSCSGSDVACDTLAFCSESTQLCSLPYSLDLNETCTFN 196

Query: 670 DDCNQP--ENLYCSQKSHLCEEY-----VQPKQPTTNCSLTENSCDQFHECSCD-GKC-- 819
DD + NL CS+K E + CS+ NSC C C+ G C
Sbjct: 197 DDFDYQCKPNLTCSKKGTCIESLNDSNSINENNSEKQCSI--NSCGIGKYCDCNSGNCLN 254

Query: 820 --YQSSPFPTQVTSGMQPLVNCVLKNKCTWVTNFFSSDSCITKNC 948
Y T+ T C+++N+C V NF+S SC TK+C
Sbjct: 255 DTYDHFEHLTRKTE-------CIIRNRCRMVENFYSRSSCFTKHC 292

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,728,343,603
Number of extensions: 36362423
Number of successful extensions: 101070
Number of sequences better than 10.0: 852
Number of HSP's gapped: 98872
Number of HSP's successfully gapped: 1286
Length of query: 389
Length of database: 1,040,966,779
Length adjustment: 130
Effective length of query: 259
Effective length of database: 624,409,729
Effective search space: 161722119811
Effective search space used: 161722119811
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.27 gvh: 0.97 alm: 0.20 top: 0.00 tms: 0.13 mit: 0.50 mip: 0.04
nuc: 0.04 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 1.00 m3b: 0.00 m_ : 0.00

36.0 %: mitochondrial
28.0 %: endoplasmic reticulum
12.0 %: nuclear
8.0 %: plasma membrane
4.0 %: cytoplasmic
4.0 %: Golgi
4.0 %: extracellular, including cell wall
4.0 %: peroxisomal

>> prediction for Contig-U10050-1 is mit

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 5
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 4
CH (FL, L) 0
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0