| Contig-U10033-1 |
| Contig ID |
Contig-U10033-1 |
| Contig update |
2002. 9.13 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
1208 |
| Chromosome number (1..6, M) |
3 |
| Chromosome length |
6358359 |
| Start point |
5548008 |
| End point |
5549216 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
6 |
| Number of EST |
8 |
| Link to clone list |
U10033 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.18 |
| Homology vs DNA |
Query= Contig-U10033-1 (Contig-U10033-1Q) /CSM_Contig/Contig-U10033-1Q.Seq.d
(1208 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ328973) Dictyostelium discoideum cDNA clone:dda30f07, 5' ... 1128 0.0 1
(BJ417430) Dictyostelium discoideum cDNA clone:ddv30h16, 5' ... 1108 0.0 1
(BJ434045) Dictyostelium discoideum cDNA clone:ddv23a23, 3' ... 926 0.0 2
(BJ436259) Dictyostelium discoideum cDNA clone:ddv30h16, 3' ... 777 0.0 3
(BJ346233) Dictyostelium discoideum cDNA clone:dda30f07, 3' ... 775 0.0 3
(BJ398601) Dictyostelium discoideum cDNA clone:dds1m05, 3' e... 761 0.0 4
(C84780) Dictyostelium discoideum slug cDNA, clone SSF722. 733 0.0 3
(AU061573) Dictyostelium discoideum slug cDNA, clone SLE671. 922 0.0 1
(BJ387263) Dictyostelium discoideum cDNA clone:dds1m05, 5' e... 733 0.0 3
(AU034907) Dictyostelium discoideum slug cDNA, clone SLE671. 301 e-174 3
(FC819572) Sr_pAMT7_015d12_T7 S. ratti mixed stage pAMP Stro... 66 4e-33 6
(AL408570) T3 end of clone AV0AA009D04 of library AV0AA from... 76 3e-30 5
(CZ529044) SRAA-aac58h09.g1 Strongyloides ratti whole genome... 58 1e-28 6
(CD420679) ku90b09.y1 Strongyloides ratti PA female naive pA... 66 3e-22 5
(BB978661) Plasmodium berghei strain ANKA cDNA clone:OK00870... 68 1e-21 3
(DY677805) TT1AK63TH Tetrahymena thermophila EST library str... 56 5e-21 4
(AM667346) Entamoeba terrapinae GSS, clone terra128g03.q1k. 56 4e-20 4
(AL436109) T3 end of clone BC0AA001D08 of library BC0AA from... 56 6e-20 4
(DC869017) Samia cynthia ricini cDNA, clone: S13A02NGRL0012_... 50 1e-18 4
(FF606915) G825P5130RD11.T0 Acorn worm normalized gastrula p... 54 1e-18 4
(FF602380) G825P5101RH8.T0 Acorn worm normalized gastrula pE... 54 1e-18 4
(FF622530) G825P524RD3.T0 Acorn worm normalized gastrula pEx... 54 1e-18 4
(FF494838) G708P52RC2.T0 Acorn worm normalized gastrula pExp... 54 1e-18 4
(FF610953) G825P5157RG8.T0 Acorn worm normalized gastrula pE... 54 1e-18 4
(FF630304) G825P540RH3.T0 Acorn worm normalized gastrula pEx... 54 1e-18 4
(EE003514) ROE00013418 Rhizopus oryzae Company Rhizopus oryz... 56 3e-18 4
(CB098032) ku48c10.y1 Strongyloides ratti PA female naive pA... 66 4e-18 3
(BJ323895) Dictyostelium discoideum cDNA clone:dda12d21, 5' ... 86 3e-17 3
(BJ362689) Dictyostelium discoideum cDNA clone:ddc23f02, 5' ... 86 3e-17 3
(AU073001) Dictyostelium discoideum slug cDNA, clone SSF683. 86 2e-16 2
(BJ411648) Dictyostelium discoideum cDNA clone:ddv5b09, 5' e... 86 4e-16 2
(CN211434) rzhswab0_000815 Silkworm posterior silkgland libr... 62 7e-15 3
(BY936597) Bombyx mori cDNA, clone:E_FL_prW-_10N07_F_0, 5' e... 62 8e-15 3
(FF631084) G825P546RA10.T0 Acorn worm normalized gastrula pE... 54 1e-14 4
(AR549932) Sequence 5063 from patent US 6747137. 66 2e-14 3
(BP181527) Bombyx mori cDNA, clone: ovS329D04f, 5' end seque... 62 1e-12 3
(CK560498) rswpb0_002911.y1 swp Bombyx mori cDNA, mRNA seque... 62 1e-12 3
(CK559576) rswpb0_001645.y1 swp Bombyx mori cDNA, mRNA seque... 62 1e-12 3
(CK539399) rswhb0_001996.y1 swh Bombyx mori cDNA, mRNA seque... 62 1e-12 3
(CK560925) rswpb0_003377.y1 swp Bombyx mori cDNA, mRNA seque... 62 2e-12 3
(EX608186) 255364714 Pea aphid whole body normalized full le... 64 3e-12 4
(EX607751) 255358531 Pea aphid whole body normalized full le... 64 3e-12 4
(FF292713) 279283539 Pea aphid whole body normalized full le... 64 4e-12 4
(FF459976) G50P6060FB5.T0 Acorn worm gastrula/neurula pCMVSp... 54 4e-12 3
(CN758206) ID0AAA21CD07RM1 ApMS Acyrthosiphon pisum cDNA clo... 64 4e-12 4
(FF625232) G825P5314RA2.T0 Acorn worm normalized gastrula pE... 54 5e-12 3
(CN760790) ID0AAA29CA08RM1 ApMS Acyrthosiphon pisum cDNA clo... 64 5e-12 4
(DQ443391) Bombyx mori replication factor C4 mRNA, complete ... 62 7e-12 3
(DT734104) EST1167954 Aquilegia cDNA library Aquilegia formo... 70 8e-12 3
(DR951060) EST1142599 Aquilegia cDNA library Aquilegia formo... 70 1e-11 3
(DR919418) EST1110957 Aquilegia cDNA library Aquilegia formo... 70 1e-11 3
(FG226010) Aats03280 Antheraea assama fifth instar larval te... 50 5e-11 3
(EE261106) H03_H03ff1p6_pDNRf_501579 Myzus persicae, line F0... 54 8e-11 3
(BH138867) ENTOJ90TR Entamoeba histolytica Sheared DNA Entam... 52 8e-11 2
(AZ686266) ENTLF18TR Entamoeba histolytica Sheared DNA Entam... 52 8e-11 2
(AZ534601) ENTCO70TR Entamoeba histolytica Sheared DNA Entam... 52 8e-11 2
(FF493747) G708P5230RE8.T0 Acorn worm normalized gastrula pE... 60 9e-11 2
(FF450296) G178P60124RH9.T0 Acorn worm gastrula/neurula pCMV... 60 9e-11 2
(FF498854) G708P586RC11.T0 Acorn worm normalized gastrula pE... 60 9e-11 2
(FF625246) G825P5314RA10.T0 Acorn worm normalized gastrula p... 60 9e-11 2
(FF625773) G825P5317RH6.T0 Acorn worm normalized gastrula pE... 60 9e-11 2
(FF617276) G825P5208RB2.T0 Acorn worm normalized gastrula pE... 60 1e-10 2
(FF613744) G825P5175RF8.T0 Acorn worm normalized gastrula pE... 60 1e-10 2
(FF627781) G825P532RH7.T0 Acorn worm normalized gastrula pEx... 60 1e-10 2
(FF501555) G709P5130RD9.T0 Acorn worm normalized neurula pEx... 60 1e-10 2
(FF499022) G708P58RE4.T0 Acorn worm normalized gastrula pExp... 60 1e-10 2
(EE263603) A11_A11gf2a21_pDNRf_504900 Myzus persicae, line G... 54 1e-10 3
(CR382137) Debaryomyces hansenii chromosome E of strain CBS7... 56 3e-10 2
(EH116617) HA_MX0_95a03_SP6 Lobster Multiple Tissues, Normal... 60 3e-10 3
(EH116246) HA_MX0_90g01_SP6 Lobster Multiple Tissues, Normal... 60 3e-10 3
(DT731677) EST1165527 Aquilegia cDNA library Aquilegia formo... 70 4e-10 2
(FF496514) G708P53RH6.T0 Acorn worm normalized gastrula pExp... 60 4e-10 2
(ES218364) MpFVN_ag3_J21 Myzus persicae, line F001, PLRV fre... 56 1e-09 2
(EK141827) 1095454127250 Global-Ocean-Sampling_GS-31-01-01-1... 50 1e-09 3
(AJ806812) Antirrhinum majus EST, clone 018_6_05_a03. 64 2e-09 2
(AJ798280) Antirrhinum majus EST, clone 018_4_04_g22. 64 2e-09 2
(EJ129741) 1092343424384 Global-Ocean-Sampling_GS-27-01-01-1... 44 2e-09 4
(FC720944) CBBG13734.fwd CBBG Lottia gigantea 12,15,18h embr... 48 3e-09 4
(FF609763) G825P5149RA7.T0 Acorn worm normalized gastrula pE... 44 4e-09 3
(FF437686) G142P60221RE2.T0 Acorn worm juvenile pCMVSport6 l... 54 5e-09 2
(FF496008) G708P537RC9.T0 Acorn worm normalized gastrula pEx... 54 5e-09 2
(EJ747011) 1092963005164 Global-Ocean-Sampling_GS-30-02-01-1... 50 2e-08 3
(EJ487564) 1095403514099 Global-Ocean-Sampling_GS-28-01-01-1... 52 3e-08 3
(AX489146) Sequence 6446 from Patent WO02053728. 46 3e-08 3
(AR549972) Sequence 5103 from patent US 6747137. 46 4e-08 3
(CJ390885) Molgula tectiformis cDNA, gonad clone:mtgd015c01,... 44 5e-08 4
(FF316281) 280366719 Pea aphid whole body normalized full le... 64 8e-08 3
(EK402195) 1095469544420 Global-Ocean-Sampling_GS-31-01-01-1... 36 1e-07 5
(EB825278) 1088252 KZ01 Plodia interpunctella cDNA clone 556... 46 1e-07 3
(AF069296) Plasmodium falciparum replication factor C3 (rfc3... 54 2e-07 3
(AL396957) T7 end of clone XAR0AA001G09 of library XAR0AA fr... 44 2e-07 4
(FG073157) UI-FF-IF0-abf-g-07-0-UI.r1 Ceratitis capitata emb... 42 3e-07 3
(FG074906) UI-FF-IF0-abk-c-09-0-UI.r1 Ceratitis capitata emb... 42 3e-07 3
(BI517246) BB160024B20E10.5 Bee Brain Normalized Library, BB... 50 6e-07 3
(EG948749) HA_MX0_73d05_SP6 Lobster Multiple Tissues, Normal... 60 1e-06 2
(EX163387) LY_YIT_DP1482 Dermatophagoides pteronyssinus cDNA... 48 1e-06 2
(CA097784) SCMCCL6051B01.g CL6 Saccharum officinarum cDNA cl... 54 1e-06 2
(AW565174) LG1_328_B01.b1_A002 Light Grown 1 (LG1) Sorghum b... 54 1e-06 2
(EK222023) 1095460143961 Global-Ocean-Sampling_GS-31-01-01-1... 58 1e-06 3
(CA110305) SCVPHR1091A07.g HR1 Saccharum officinarum cDNA cl... 54 1e-06 2
>(BJ328973) Dictyostelium discoideum cDNA clone:dda30f07, 5' end,
single read.
Length = 644
Score = 1128 bits (569), Expect = 0.0
Identities = 572/573 (99%)
Strand = Plus / Plus
Query: 72 gatatggcagataaaacaaataaatttaaaacagatatagaaagaaaacagtttgaaagt 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 gatatggcagataaaacaaataaatttaaaacagatatagaaagaaaacagtttgaaagt 131
Query: 132 ttaccttgggtagaaaaatatagaccaaagaatttagatgatttaattgcacatgaagat 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ttaccttgggtagaaaaatatagaccaaagaatttagatgatttaattgcacatgaagat 191
Query: 192 attacacaaacaattacaaaattaatagataataatacattaccacatttactattttat 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 attacacaaacaattacaaaattaatagataataatacattaccacatttactattttat 251
Query: 252 ggaccaccgggtacaggtaaaacatcaactattcaagcaattgcaagaaaattatatggt 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ggaccaccgggtacaggtaaaacatcaactattcaagcaattgcaagaaaattatatggt 311
Query: 312 gataattactctagaatggtgttagaattaaatgcatctgatgatcgtggtattgatgtt 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gataattactctagaatggtgttagaattaaatgcatctgatgatcgtggtattgatgtt 371
Query: 372 gtcagagaacaaattaagacatttgcaagttcaatgttcttttttaatacaacagtacca 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gtcagagaacaaattaagacatttgcaagttcaatgttcttttttaatacaacagtacca 431
Query: 432 tataaattaattattttagatgaagcagattcaatgacaaatattgcacaaacagcatta 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tataaattaattattttagatgaagcagattcaatgacaaatattgcacaaacagcatta 491
Query: 492 agaagagtaattgaaaagtatacaaaaacaactagattttgtatagtttgtaattatgtt 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 agaagagtaattgaaaagtatacaaaaacaactagattttgtatagtttgtaattatgtt 551
Query: 552 attaaaattatacctgctttacaatcaagatgtacaagatttagatttagtccattacca 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 552 attaaaattatacctgctttacaatcaagatgtacaagatttagatttagtccattatca 611
Query: 612 actccaccaactgaaattagattaaaagaaatt 644
|||||||||||||||||||||||||||||||||
Sbjct: 612 actccaccaactgaaattagattaaaagaaatt 644
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,413,255,220
Number of extensions: 89183209
Number of successful extensions: 7714397
Number of sequences better than 10.0: 855
Length of query: 1208
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1184
Effective length of database: 97,308,875,965
Effective search space: 115213709142560
Effective search space used: 115213709142560
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.27 |
| Homology vs Protein |
Query= Contig-U10033-1 (Contig-U10033-1Q) /CSM_Contig/Contig-U10033-1Q.Seq.d
(1208 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q54ST4) RecName: Full=Probable replication factor C subunit 5; ... 660 0.0
EU963750_1(EU963750|pid:none) Zea mays clone 272351 replication ... 350 4e-95
AK290685_1(AK290685|pid:none) Homo sapiens cDNA FLJ76127 complet... 347 5e-94
(P40937) RecName: Full=Replication factor C subunit 5; AltName: ... 347 5e-94
AB038319_1(AB038319|pid:none) Oryza sativa Japonica Group OsRFC3... 345 1e-93
BC168902_1(BC168902|pid:none) Rattus norvegicus replication fact... 345 1e-93
BC095222_1(BC095222|pid:none) Danio rerio replication factor C (... 340 8e-92
AY648755_1(AY648755|pid:none) Danio rerio replication factor C s... 340 8e-92
BC044712_1(BC044712|pid:none) Xenopus laevis replication factor ... 339 1e-91
BT050193_1(BT050193|pid:none) Salmo salar clone ssal-eve-531-269... 337 7e-91
AE017356_62(AE017356|pid:none) Cryptococcus neoformans var. neof... 332 1e-89
BT082372_1(BT082372|pid:none) Anoplopoma fimbria clone afim-evh-... 332 2e-89
DQ311213_1(DQ311213|pid:none) Bombyx mori replication factor C (... 329 1e-88
(O14003) RecName: Full=Replication factor C subunit 3; ... 328 2e-88
BC023674_1(BC023674|pid:none) Mus musculus replication factor C ... 327 7e-88
CP001329_281(CP001329|pid:none) Micromonas sp. RCC299 chromosome... 317 7e-85
(P38629) RecName: Full=Replication factor C subunit 3; ... 316 9e-85
CR382125_575(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 316 9e-85
CU928165_56(CU928165|pid:none) Kluyveromyces thermotolerans stra... 316 9e-85
CR380959_153(CR380959|pid:none) Candida glabrata strain CBS138 c... 316 1e-84
BT080858_1(BT080858|pid:none) Caligus clemensi clone ccle-evs-50... 315 2e-84
(O74111) RecName: Full=Replication factor C subunit 3; ... 315 2e-84
BC108105_1(BC108105|pid:none) Bos taurus replication factor C 5,... 315 2e-84
AE014134_1955(AE014134|pid:none) Drosophila melanogaster chromos... 313 8e-84
CU928175_77(CU928175|pid:none) Zygosaccharomyces rouxii strain C... 312 1e-83
CR382137_947(CR382137|pid:none) Debaryomyces hansenii strain CBS... 309 1e-82
CR382137_1044(CR382137|pid:none) Debaryomyces hansenii chromosom... 308 2e-82
AP007155_1157(AP007155|pid:none) Aspergillus oryzae RIB40 genomi... 303 8e-81
AM920436_1445(AM920436|pid:none) Penicillium chrysogenum Wiscons... 301 3e-80
FM992692_367(FM992692|pid:none) Candida dubliniensis CD36 chromo... 301 3e-80
AM494971_316(AM494971|pid:none) Leishmania braziliensis chromoso... 297 6e-79
AM502253_335(AM502253|pid:none) Leishmania infantum chromosome 35. 296 7e-79
CP000582_332(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 296 7e-79
CP000081_321(CP000081|pid:none) Leishmania major chromosome 35, ... 295 3e-78
CR940353_344(CR940353|pid:none) Theileria annulata strain Ankara... 293 6e-78
BX284762_18(BX284762|pid:none) Neurospora crassa DNA linkage gro... 291 3e-77
AE014187_599(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 283 7e-75
S44809(S44809)F44B9.8 protein - Caenorhabditis elegans 280 7e-74
CR954202_77(CR954202|pid:none) Ostreococcus tauri strain OTTH059... 276 8e-73
FN359075_1(FN359075|pid:none) Schistosoma mansoni genome sequenc... 270 1e-70
AM270358_29(AM270358|pid:none) Aspergillus niger contig An16c006... 268 4e-70
AB168973_1(AB168973|pid:none) Macaca fascicularis testis cDNA, c... 262 2e-68
AK291107_1(AK291107|pid:none) Homo sapiens cDNA FLJ77120 complet... 261 5e-68
(Q975D3) RecName: Full=Replication factor C small subunit; ... 256 9e-67
(B0R7H7) RecName: Full=Replication factor C small subunit; ... 250 8e-65
(Q6M044) RecName: Full=Replication factor C small subunit; ... 247 7e-64
(A1RWU7) RecName: Full=Replication factor C small subunit; ... 245 3e-63
(O28219) RecName: Full=Replication factor C small subunit; ... 243 1e-62
(Q4JAB0) RecName: Full=Replication factor C small subunit; ... 243 1e-62
(A3DNV9) RecName: Full=Replication factor C small subunit; ... 243 1e-62
(Q0W037) RecName: Full=Replication factor C small subunit; ... 240 6e-62
(Q5UZE5) RecName: Full=Replication factor C small subunit; ... 240 6e-62
CP001400_1236(CP001400|pid:none) Sulfolobus islandicus M.14.25, ... 240 8e-62
(Q3ITJ2) RecName: Full=Replication factor C small subunit; ... 240 8e-62
C72633(C72633)probable replication factor C subunit APE1522 - Ae... 238 3e-61
AJ721123_1(AJ721123|pid:none) Gallus gallus mRNA for hypothetica... 238 3e-61
(Q9YBS7) RecName: Full=Replication factor C small subunit; ... 238 3e-61
CP001404_1364(CP001404|pid:none) Sulfolobus islandicus Y.N.15.51... 237 5e-61
(A4WGV2) RecName: Full=Replication factor C small subunit 1; ... 234 6e-60
CP001365_381(CP001365|pid:none) Halorubrum lacusprofundi ATCC 49... 233 1e-59
AB080268_1(AB080268|pid:none) Xenopus laevis RFC2 mRNA for repli... 232 2e-59
A45253(A45253;B45253)activator 1 37K chain - human 232 2e-59
BC135432_1(BC135432|pid:none) Xenopus tropicalis replication fac... 231 4e-59
(Q2NH89) RecName: Full=Replication factor C small subunit; ... 231 5e-59
BC168166_1(BC168166|pid:none) Rattus norvegicus replication fact... 230 7e-59
(A3MS28) RecName: Full=Replication factor C small subunit; ... 229 1e-58
(Q99J62) RecName: Full=Replication factor C subunit 4; AltName: ... 228 3e-58
CP000499_653(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 228 3e-58
CR382138_701(CR382138|pid:none) Debaryomyces hansenii strain CBS... 225 2e-57
CP000852_898(CP000852|pid:none) Caldivirga maquilingensis IC-167... 224 4e-57
CP001140_686(CP001140|pid:none) Desulfurococcus kamchatkensis 12... 224 5e-57
CP000855_1421(CP000855|pid:none) Thermococcus onnurineus NA1, co... 223 8e-57
(P40348) RecName: Full=Replication factor C subunit 2; ... 223 1e-56
AY557920_1(AY557920|pid:none) Saccharomyces cerevisiae clone FLH... 223 1e-56
(Q6L1I0) RecName: Full=Replication factor C small subunit; ... 223 1e-56
AK147030_1(AK147030|pid:none) Mus musculus 17 days embryo kidney... 221 3e-56
DQ443391_1(DQ443391|pid:none) Bombyx mori replication factor C4 ... 221 3e-56
BC114041_1(BC114041|pid:none) Bos taurus replication factor C (a... 221 3e-56
(A2SQT3) RecName: Full=Replication factor C small subunit; ... 221 3e-56
CR954209_104(CR954209|pid:none) Ostreococcus tauri strain OTTH05... 221 4e-56
(Q9HI47) RecName: Full=Replication factor C small subunit; ... 220 7e-56
AL445067_265(AL445067|pid:none) Thermoplasma acidophilum complet... 220 7e-56
CP000589_98(CP000589|pid:none) Ostreococcus lucimarinus CCE9901 ... 220 9e-56
(Q2FQT9) RecName: Full=Replication factor C small subunit; ... 219 1e-55
EU016664_18(EU016664|pid:none) Uncultured marine microorganism H... 218 3e-55
(O26343) RecName: Full=Replication factor C small subunit; ... 215 2e-54
CR954212_246(CR954212|pid:none) Ostreococcus tauri strain OTTH05... 215 3e-54
AE014298_2736(AE014298|pid:none) Drosophila melanogaster chromos... 214 5e-54
CR382122_580(CR382122|pid:none) Kluyveromyces lactis strain NRRL... 214 6e-54
AY223320_1(AY223320|pid:none) Schistosoma japonicum clone ZZD636... 214 6e-54
CP000561_570(CP000561|pid:none) Pyrobaculum calidifontis JCM 115... 213 8e-54
AP006852_78(AP006852|pid:none) Candida albicans genomic DNA, chr... 213 8e-54
FN357883_5(FN357883|pid:none) Schistosoma mansoni genome sequenc... 212 2e-53
(A1RV38) RecName: Full=Replication factor C small subunit 2; ... 211 4e-53
AF204951_182(AF204951|pid:none) Ectocarpus siliculosus virus, co... 211 4e-53
AE001362_171(AE001362|pid:none) Plasmodium falciparum 3D7 chromo... 211 4e-53
CP001014_676(CP001014|pid:none) Thermoproteus neutrophilus V24St... 210 7e-53
AM468893_1(AM468893|pid:none) Vitis vinifera contig VV78X235866.... 210 9e-53
(A4WLY0) RecName: Full=Replication factor C small subunit 2; ... 209 1e-52
(Q8ZWS2) RecName: Full=Replication factor C small subunit 2; ... 209 1e-52
AF071409_1(AF071409|pid:none) Plasmodium falciparum replication ... 209 2e-52
CP001332_325(CP001332|pid:none) Micromonas sp. RCC299 chromosome... 208 3e-52
CP001338_2005(CP001338|pid:none) Candidatus Methanosphaerula pal... 207 5e-52
CR940347_245(CR940347|pid:none) Theileria annulata strain Ankara... 207 5e-52
AC140916_27(AC140916|pid:none) Medicago truncatula clone mth2-12... 206 1e-51
(Q8TSX5) RecName: Full=Replication factor C small subunit; ... 206 1e-51
AF036699_3(AF036699|pid:none) Caenorhabditis elegans cosmid F58F... 206 1e-51
EU016599_8(EU016599|pid:none) Uncultured Group I marine crenarch... 206 2e-51
CP000866_236(CP000866|pid:none) Nitrosopumilus maritimus SCM1, c... 205 2e-51
AY056210_1(AY056210|pid:none) Arabidopsis thaliana putative repl... 205 2e-51
BT049067_1(BT049067|pid:none) Salmo salar clone ssal-rgb2-654-31... 205 3e-51
(Q46C63) RecName: Full=Replication factor C small subunit; ... 205 3e-51
(P53034) RecName: Full=Replication factor C subunit 2; AltName: ... 203 1e-50
AL590442_29(AL590442|pid:none) chromosome II of strain GB-M1 of ... 202 2e-50
AP008218_387(AP008218|pid:none) Oryza sativa (japonica cultivar-... 202 2e-50
BT042133_1(BT042133|pid:none) Zea mays full-length cDNA clone ZM... 202 3e-50
EU959995_1(EU959995|pid:none) Zea mays clone 221054 replication ... 201 3e-50
BT078329_1(BT078329|pid:none) Lepeophtheirus salmonis clone lsal... 201 3e-50
BT039473_1(BT039473|pid:none) Zea mays full-length cDNA clone ZM... 201 3e-50
EU961898_1(EU961898|pid:none) Zea mays clone 238950 replication ... 201 6e-50
(P0C7N7) RecName: Full=Replication factor C subunit 2; ... 201 6e-50
AB066661_1(AB066661|pid:none) Oryza sativa Japonica Group OsRFC4... 201 6e-50
CR382123_159(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 200 7e-50
AC009259_30(AC009259|pid:none) Trypanosoma brucei chromosome 6 c... 200 1e-49
CR940352_401(CR940352|pid:none) Theileria annulata strain Ankara... 200 1e-49
AC007727_11(AC007727|pid:none) Arabidopsis thaliana chromosome 1... 199 1e-49
CU633867_43(CU633867|pid:none) Podospora anserina genomic DNA ch... 199 2e-49
AE016817_511(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 198 3e-49
(P53033) RecName: Full=Replication factor C subunit 2; AltName: ... 198 3e-49
BC070622_1(BC070622|pid:none) Xenopus laevis hypothetical protei... 198 4e-49
(Q05B83) RecName: Full=Replication factor C subunit 2; AltName: ... 198 4e-49
CU928174_262(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 197 5e-49
CU928167_411(CU928167|pid:none) Kluyveromyces thermotolerans str... 197 8e-49
(Q9WUK4) RecName: Full=Replication factor C subunit 2; AltName: ... 196 2e-48
(Q641W4) RecName: Full=Replication factor C subunit 2; AltName: ... 195 2e-48
CR380955_324(CR380955|pid:none) Candida glabrata strain CBS138 c... 194 4e-48
BT080709_1(BT080709|pid:none) Caligus clemensi clone ccle-evs-50... 194 7e-48
A42700(A42700)replication factor C - human 193 9e-48
CR382132_313(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 193 1e-47
AF204951_224(AF204951|pid:none) Ectocarpus siliculosus virus, co... 193 1e-47
AM920435_720(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 192 2e-47
(Q5UQ72) RecName: Full=Putative replication factor C small subun... 192 2e-47
AM910987_230(AM910987|pid:none) Plasmodium knowlesi strain H chr... 191 4e-47
(P40339) RecName: Full=Replication factor C subunit 4; ... 191 6e-47
AM910994_387(AM910994|pid:none) Plasmodium knowlesi strain H chr... 190 1e-46
CR382133_574(CR382133|pid:none) Debaryomyces hansenii strain CBS... 186 1e-45
AE014188_396(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 185 2e-45
AM920427_444(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 185 2e-45
AM502248_298(AM502248|pid:none) Leishmania infantum chromosome 30. 184 5e-45
CT005267_280(CT005267|pid:none) Leishmania major strain Friedlin... 184 7e-45
AP007164_31(AP007164|pid:none) Aspergillus oryzae RIB40 genomic ... 184 7e-45
FN357366_58(FN357366|pid:none) Schistosoma mansoni genome sequen... 181 4e-44
FN392319_24(FN392319|pid:none) Pichia pastoris GS115 chromosome ... 181 5e-44
AY813692_1(AY813692|pid:none) Schistosoma japonicum SJCHGC05804 ... 179 1e-43
(Q5UQ47) RecName: Full=Putative replication factor C small subun... 172 2e-41
(Q5JHP2) RecName: Full=Replication factor C small subunit; ... 171 5e-41
BC054598_1(BC054598|pid:none) Danio rerio replication factor C (... 171 6e-41
AM494967_259(AM494967|pid:none) Leishmania braziliensis chromoso... 169 1e-40
AM494964_66(AM494964|pid:none) Leishmania braziliensis chromosom... 167 9e-40
AM502249_46(AM502249|pid:none) Leishmania infantum chromosome 31. 166 2e-39
CP000079_55(CP000079|pid:none) Leishmania major strain Friedlin ... 164 8e-39
AE010299_140(AE010299|pid:none) Methanosarcina acetivorans str. ... 162 2e-38
CP000882_111(CP000882|pid:none) Hemiselmis andersenii chromosome... 159 1e-37
AE008384_1426(AE008384|pid:none) Methanosarcina mazei strain Goe... 157 9e-37
(Q8TZC4) RecName: Full=Replication factor C small subunit; ... 151 5e-35
AC005081_2(AC005081|pid:none) Homo sapiens BAC clone CTA-270D13 ... 149 2e-34
AY714853_41(AY714853|pid:none) Uncultured archaeon GZfos31B6 clo... 141 4e-32
CP000743_1295(CP000743|pid:none) Methanococcus aeolicus Nankai-3... 139 2e-31
CP000300_1843(CP000300|pid:none) Methanococcoides burtonii DSM 6... 128 4e-28
AL590442_67(AL590442|pid:none) chromosome II of strain GB-M1 of ... 126 1e-27
DQ149023_152(DQ149023|pid:none) Synechococcus cyanophage syn9, c... 125 4e-27
CT005272_696(CT005272|pid:none) Leishmania major strain Friedlin... 124 9e-27
AE017342_447(AE017342|pid:none) Cryptococcus neoformans var. neo... 123 1e-26
AY939844_162(AY939844|pid:none) Cyanophage P-SSM2, complete geno... 121 4e-26
AM494972_708(AM494972|pid:none) Leishmania braziliensis chromoso... 120 1e-25
BC088281_1(BC088281|pid:none) Rattus norvegicus replication fact... 118 5e-25
AY283928_78(AY283928|pid:none) Bacteriophage KVP40, complete gen... 117 8e-25
AY890688_1(AY890688|pid:none) Synthetic construct Homo sapiens c... 117 8e-25
AK222572_1(AK222572|pid:none) Homo sapiens mRNA for replication ... 117 8e-25
(P40938) RecName: Full=Replication factor C subunit 3; AltName: ... 117 8e-25
AB169595_1(AB169595|pid:none) Macaca fascicularis brain cDNA, cl... 117 8e-25
CP001338_1790(CP001338|pid:none) Candidatus Methanosphaerula pal... 117 8e-25
AY888401_1(AY888401|pid:none) Synthetic construct Homo sapiens c... 117 8e-25
AK296527_1(AK296527|pid:none) Homo sapiens cDNA FLJ60629 complet... 116 1e-24
AY074381_1(AY074381|pid:none) Arabidopsis thaliana putative repl... 116 2e-24
AK042393_1(AK042393|pid:none) Mus musculus 3 days neonate thymus... 115 4e-24
(Q8R323) RecName: Full=Replication factor C subunit 3; AltName: ... 115 4e-24
(Q2TBV1) RecName: Full=Replication factor C subunit 3; AltName: ... 114 5e-24
CP000414_231(CP000414|pid:none) Leuconostoc mesenteroides subsp.... 114 7e-24
CP000496_9(CP000496|pid:none) Pichia stipitis CBS 6054 chromosom... 113 1e-23
CR382136_809(CR382136|pid:none) Debaryomyces hansenii strain CBS... 112 2e-23
AY548904_1(AY548904|pid:none) Antonospora locustae replication f... 112 2e-23
AP009178_1457(AP009178|pid:none) Nitratiruptor sp. SB155-2 genom... 112 3e-23
FM992689_89(FM992689|pid:none) Candida dubliniensis CD36 chromos... 112 3e-23
BC098179_1(BC098179|pid:none) Xenopus laevis hypothetical protei... 110 1e-22
BT074571_1(BT074571|pid:none) Osmerus mordax clone omor-rgc-504-... 110 1e-22
CP001098_2061(CP001098|pid:none) Halothermothrix orenii H 168, c... 110 1e-22
CR382136_918(CR382136|pid:none) Debaryomyces hansenii chromosome... 109 2e-22
CP000780_1657(CP000780|pid:none) Candidatus Methanoregula boonei... 109 2e-22
CP000153_1552(CP000153|pid:none) Sulfurimonas denitrificans DSM ... 108 3e-22
BT051590_1(BT051590|pid:none) Medicago truncatula clone MTYF5_F6... 108 3e-22
CR382129_811(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 107 6e-22
A70460(A70460) DNA polymerase III gamma subunit - Aquifex aeolic... 107 6e-22
AB109201_1(AB109201|pid:none) Oryza sativa Japonica Group OsRFC5... 107 6e-22
AC090871_19(AC090871|pid:none) Oryza sativa chromosome 3 BAC OSJ... 107 8e-22
AE017308_73(AE017308|pid:none) Mycoplasma mobile 163K complete g... 107 8e-22
AY815782_1(AY815782|pid:none) Schistosoma japonicum SJCHGC06117 ... 107 1e-21
BT076315_1(BT076315|pid:none) Caligus rogercresseyi clone crog-e... 107 1e-21
AF160912_1(AF160912|pid:none) Drosophila melanogaster LD06837 fu... 107 1e-21
BC042327_1(BC042327|pid:none) Danio rerio replication factor C (... 105 2e-21
CU466930_1153(CU466930|pid:none) Candidatus Cloacamonas acidamin... 105 2e-21
BX842656_139(BX842656|pid:none) Bdellovibrio bacteriovorus compl... 105 2e-21
CP000776_1184(CP000776|pid:none) Campylobacter hominis ATCC BAA-... 105 3e-21
AF208499_1(AF208499|pid:none) Rattus norvegicus replication fact... 105 4e-21
CP000241_703(CP000241|pid:none) Helicobacter pylori HPAG1, compl... 104 5e-21
CP001217_719(CP001217|pid:none) Helicobacter pylori P12, complet... 104 7e-21
AE000511_707(AE000511|pid:none) Helicobacter pylori 26695, compl... 104 7e-21
(Q54BN3) RecName: Full=Probable replication factor C subunit 3; ... 103 9e-21
CP001072_626(CP001072|pid:none) Helicobacter pylori Shi470, comp... 103 9e-21
CP000767_1266(CP000767|pid:none) Campylobacter curvus 525.92, co... 103 9e-21
AM260522_847(AM260522|pid:none) Helicobacter acinonychis str. Sh... 103 1e-20
CP001055_1448(CP001055|pid:none) Elusimicrobium minutum Pei191, ... 103 1e-20
(O94697) RecName: Full=Replication factor C subunit 5; ... 103 2e-20
CP000702_245(CP000702|pid:none) Thermotoga petrophila RKU-1, com... 103 2e-20
CP000117_2207(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 103 2e-20
AE000512_674(AE000512|pid:none) Thermotoga maritima MSB8, comple... 103 2e-20
FN357420_16(FN357420|pid:none) Schistosoma mansoni genome sequen... 102 2e-20
CP001185_1681(CP001185|pid:none) Thermosipho africanus TCF52B, c... 102 3e-20
(Q9V2G4) RecName: Full=Replication factor C small subunit; ... 101 5e-20
FN314473_1(FN314473|pid:none) Schistosoma japonicum isolate Anhu... 101 5e-20
FN314472_1(FN314472|pid:none) Schistosoma japonicum isolate Anhu... 101 5e-20
CR940347_163(CR940347|pid:none) Theileria annulata strain Ankara... 101 5e-20
CP000916_1900(CP000916|pid:none) Thermotoga neapolitana DSM 4359... 101 6e-20
CP000240_1275(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-1... 100 8e-20
CP000033_359(CP000033|pid:none) Lactobacillus acidophilus NCFM, ... 100 1e-19
AL111168_1091(AL111168|pid:none) Campylobacter jejuni subsp. jej... 100 1e-19
CP000025_1252(CP000025|pid:none) Campylobacter jejuni RM1221, co... 99 3e-19
CP000024_1102(CP000024|pid:none) Streptococcus thermophilus CNRZ... 99 3e-19
CP000111_1902(CP000111|pid:none) Prochlorococcus marinus str. MI... 99 4e-19
(Q8Q084) RecName: Full=Replication factor C large subunit; ... 99 4e-19
CP000023_1080(CP000023|pid:none) Streptococcus thermophilus LMG ... 99 4e-19
CP001357_1881(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 99 4e-19
CT573071_1487(CT573071|pid:none) Kuenenia stuttgartiensis genome... 98 5e-19
CU179680_690(CU179680|pid:none) Mycoplasma agalactiae PG2 chromo... 98 5e-19
CP001187_49(CP001187|pid:none) Bacillus cereus G9842 plasmid pG9... 98 5e-19
CP000716_1362(CP000716|pid:none) Thermosipho melanesiensis BI429... 98 7e-19
CP000027_572(CP000027|pid:none) Dehalococcoides ethenogenes 195,... 98 7e-19
CP000922_17(CP000922|pid:none) Anoxybacillus flavithermus WK1, c... 97 9e-19
CP000818_44(CP000818|pid:none) Lysinibacillus sphaericus C3-41 p... 97 9e-19
CP000123_7(CP000123|pid:none) Mycoplasma capricolum subsp. capri... 97 9e-19
CP000576_1849(CP000576|pid:none) Prochlorococcus marinus str. MI... 97 9e-19
BT049100_1(BT049100|pid:none) Salmo salar clone ssal-evd-551-346... 97 1e-18
CP000239_541(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, comp... 97 1e-18
(Q58294) RecName: Full=Replication factor C large subunit; ... 97 1e-18
CP000487_1351(CP000487|pid:none) Campylobacter fetus subsp. fetu... 97 1e-18
CP001078_3127(CP001078|pid:none) Clostridium botulinum E3 str. A... 96 2e-18
AE014133_1432(AE014133|pid:none) Streptococcus mutans UA159, com... 96 2e-18
CP000878_1785(CP000878|pid:none) Prochlorococcus marinus str. MI... 96 3e-18
AM398681_940(AM398681|pid:none) Flavobacterium psychrophilum JIP... 96 3e-18
CP001056_3356(CP001056|pid:none) Clostridium botulinum B str. Ek... 96 3e-18
CP000825_1926(CP000825|pid:none) Prochlorococcus marinus str. MI... 96 3e-18
AP009510_275(AP009510|pid:none) Uncultured Termite group 1 bacte... 96 3e-18
AE009951_309(AE009951|pid:none) Fusobacterium nucleatum subsp. n... 96 3e-18
CP000088_49(CP000088|pid:none) Thermobifida fusca YX, complete g... 95 4e-18
CT971583_62(CT971583|pid:none) Synechococcus WH7803 complete gen... 95 4e-18
CP000232_27(CP000232|pid:none) Moorella thermoacetica ATCC 39073... 95 4e-18
CP000921_1230(CP000921|pid:none) Streptococcus pneumoniae Taiwan... 95 4e-18
CP000936_883(CP000936|pid:none) Streptococcus pneumoniae Hungary... 95 4e-18
CP000141_2592(CP000141|pid:none) Carboxydothermus hydrogenoforma... 95 4e-18
AJ965256_468(AJ965256|pid:none) Dehalococcoides sp. CBDB1 comple... 95 6e-18
CP001037_3698(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 95 6e-18
CP001015_780(CP001015|pid:none) Streptococcus pneumoniae G54, co... 95 6e-18
AE005672_813(AE005672|pid:none) Streptococcus pneumoniae TIGR4, ... 95 6e-18
CP000698_4252(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 95 6e-18
CP000920_796(CP000920|pid:none) Streptococcus pneumoniae P1031, ... 95 6e-18
(Q8TPU4) RecName: Full=Replication factor C large subunit; ... 94 7e-18
CU207366_1809(CU207366|pid:none) Gramella forsetii KT0803 comple... 94 7e-18
BX569689_61(BX569689|pid:none) Synechococcus sp. WH8102 complete... 94 7e-18
CP001124_210(CP001124|pid:none) Geobacter bemidjiensis Bem, comp... 94 7e-18
CP000764_17(CP000764|pid:none) Bacillus cereus subsp. cytotoxis ... 94 7e-18
CP001393_2017(CP001393|pid:none) Anaerocellum thermophilum DSM 6... 94 1e-17
AP009484_1937(AP009484|pid:none) Macrococcus caseolyticus JCSC54... 94 1e-17
CP001175_2795(CP001175|pid:none) Listeria monocytogenes HCC23, c... 94 1e-17
CP000361_275(CP000361|pid:none) Arcobacter butzleri RM4018, comp... 94 1e-17
A97968(A97968) DNA-directed DNA polymerase (EC 2.7.7.7) III [imp... 94 1e-17
AM263198_2655(AM263198|pid:none) Listeria welshimeri serovar 6b ... 94 1e-17
CR954253_1578(CR954253|pid:none) Lactobacillus delbrueckii subsp... 94 1e-17
BX293980_48(BX293980|pid:none) Mycoplasma mycoides subsp. mycoid... 94 1e-17
AG1412(AG1412) DNA polymerase III (gamma and tau chains) homolog... 94 1e-17
(Q12TX1) RecName: Full=Replication factor C large subunit; ... 93 2e-17
AP008971_512(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 93 2e-17
CP000859_542(CP000859|pid:none) Desulfococcus oleovorans Hxd3, c... 93 2e-17
CP000425_2299(CP000425|pid:none) Lactococcus lactis subsp. cremo... 93 2e-17
CP000110_59(CP000110|pid:none) Synechococcus sp. CC9605, complet... 93 2e-17
CT978603_63(CT978603|pid:none) Synechococcus sp. RCC307 genomic ... 93 2e-17
CP001287_1999(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 92 3e-17
(Q2NH88) RecName: Full=Replication factor C large subunit; ... 92 3e-17
AK154586_1(AK154586|pid:none) Mus musculus NOD-derived CD11c +ve... 92 3e-17
AE017244_259(AE017244|pid:none) Mycoplasma hyopneumoniae 7448, c... 92 3e-17
AE017262_2659(AE017262|pid:none) Listeria monocytogenes str. 4b ... 92 3e-17
(Q4JAB1) RecName: Full=Replication factor C large subunit; ... 92 3e-17
AE016877_17(AE016877|pid:none) Bacillus cereus ATCC 14579, compl... 92 4e-17
CP000553_2120(CP000553|pid:none) Prochlorococcus marinus str. NA... 92 4e-17
(Q8X082) RecName: Full=Replication factor C subunit 5; ... 92 4e-17
CP000411_1267(CP000411|pid:none) Oenococcus oeni PSU-1, complete... 92 4e-17
AY940168_129(AY940168|pid:none) Cyanophage P-SSM4, complete geno... 92 4e-17
CP001186_18(CP001186|pid:none) Bacillus cereus G9842, complete g... 92 4e-17
CP001176_18(CP001176|pid:none) Bacillus cereus B4264, complete g... 92 4e-17
CP000383_1212(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 92 4e-17
AP008955_64(AP008955|pid:none) Brevibacillus brevis NBRC 100599 ... 92 5e-17
(A4FZL6) RecName: Full=Replication factor C large subunit; ... 92 5e-17
AE017194_20(AE017194|pid:none) Bacillus cereus ATCC 10987, compl... 91 6e-17
AP009493_3858(AP009493|pid:none) Streptomyces griseus subsp. gri... 91 6e-17
AE017263_678(AE017263|pid:none) Mesoplasma florum L1 complete ge... 91 6e-17
AY810350_1(AY810350|pid:none) Schistosoma japonicum SJCHGC08481 ... 91 6e-17
CP001177_18(CP001177|pid:none) Bacillus cereus AH187, complete g... 91 6e-17
BX294144_97(BX294144|pid:none) Rhodopirellula baltica SH 1 compl... 91 6e-17
FM204883_666(FM204883|pid:none) Streptococcus equi subsp. equi 4... 91 8e-17
AM180355_16(AM180355|pid:none) Clostridium difficile 630 complet... 91 8e-17
(A6URV8) RecName: Full=Replication factor C large subunit; ... 91 8e-17
AE017355_18(AE017355|pid:none) Bacillus thuringiensis serovar ko... 91 8e-17
AE001362_183(AE001362|pid:none) Plasmodium falciparum 3D7 chromo... 91 8e-17
CP000233_1213(CP000233|pid:none) Lactobacillus salivarius UCC118... 91 8e-17
CP000485_18(CP000485|pid:none) Bacillus thuringiensis str. Al Ha... 91 8e-17
AE017180_95(AE017180|pid:none) Geobacter sulfurreducens PCA, com... 91 8e-17
CP000095_2089(CP000095|pid:none) Prochlorococcus marinus str. NA... 91 8e-17
CP000001_18(CP000001|pid:none) Bacillus cereus E33L, complete ge... 91 8e-17
AE016879_18(AE016879|pid:none) Bacillus anthracis str. Ames, com... 91 8e-17
BA000016_45(BA000016|pid:none) Clostridium perfringens str. 13 D... 91 1e-16
CP001292_31(CP001292|pid:none) Cyanothece sp. PCC 7424 plasmid p... 91 1e-16
CP000963_158(CP000963|pid:none) Clostridium botulinum A3 str. Lo... 90 1e-16
CP000407_1619(CP000407|pid:none) Streptococcus suis 05ZYH33, com... 90 1e-16
(Q6M0E9) RecName: Full=Replication factor C large subunit; ... 90 1e-16
AE017198_434(AE017198|pid:none) Lactobacillus johnsonii NCC 533,... 90 1e-16
CP000312_46(CP000312|pid:none) Clostridium perfringens SM101, co... 90 1e-16
CP000605_1288(CP000605|pid:none) Bifidobacterium longum DJO10A, ... 90 1e-16
CP000246_43(CP000246|pid:none) Clostridium perfringens ATCC 1312... 90 1e-16
AM406671_2433(AM406671|pid:none) Lactococcus lactis subsp. cremo... 90 2e-16
CP001047_118(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 90 2e-16
FM177140_2379(FM177140|pid:none) Lactobacillus casei BL23 comple... 90 2e-16
AM295250_117(AM295250|pid:none) Staphylococcus carnosus subsp. c... 90 2e-16
CP000423_2141(CP000423|pid:none) Lactobacillus casei ATCC 334, c... 90 2e-16
(Q9V2G3) RecName: Full=Replication factor C large subunit; ... 90 2e-16
CP001229_1139(CP001229|pid:none) Sulfurihydrogenibium azorense A... 89 2e-16
AP009049_3380(AP009049|pid:none) Clostridium kluyveri NBRC 12016... 89 2e-16
CP000003_1086(CP000003|pid:none) Streptococcus pyogenes MGAS1039... 89 2e-16
CP000142_413(CP000142|pid:none) Pelobacter carbinolicus DSM 2380... 89 3e-16
CP001129_654(CP001129|pid:none) Streptococcus equi subsp. zooepi... 89 3e-16
CP000923_32(CP000923|pid:none) Thermoanaerobacter sp. X514, comp... 89 4e-16
BA000045_1609(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 89 4e-16
AE014074_1038(AE014074|pid:none) Streptococcus pyogenes MGAS315,... 89 4e-16
BA000034_822(BA000034|pid:none) Streptococcus pyogenes SSI-1 DNA... 89 4e-16
CP000260_1182(CP000260|pid:none) Streptococcus pyogenes MGAS1027... 89 4e-16
AG2535(AG2535) DNA polymerase III gamma and tau chains [imported... 89 4e-16
CP000056_1103(CP000056|pid:none) Streptococcus pyogenes MGAS6180... 89 4e-16
AM295007_734(AM295007|pid:none) Streptococcus pyogenes Manfredo ... 89 4e-16
CP000259_1158(CP000259|pid:none) Streptococcus pyogenes MGAS9429... 89 4e-16
AE009949_1135(AE009949|pid:none) Streptococcus pyogenes MGAS8232... 89 4e-16
CR925678_949(CR925678|pid:none) Ehrlichia ruminantium str. Welge... 88 5e-16
(Q9UWR2) RecName: Full=Replication factor C large subunit; ... 88 5e-16
CP000482_294(CP000482|pid:none) Pelobacter propionicus DSM 2379,... 88 5e-16
CP000910_3306(CP000910|pid:none) Renibacterium salmoninarum ATCC... 88 7e-16
AP009552_5393(AP009552|pid:none) Microcystis aeruginosa NIES-843... 88 7e-16
CP000679_1259(CP000679|pid:none) Caldicellulosiruptor saccharoly... 88 7e-16
CP001184_99(CP001184|pid:none) Ureaplasma urealyticum serovar 10... 88 7e-16
AM778918_26(AM778918|pid:none) Microcystis aeruginosa PCC 7806 g... 88 7e-16
CP001081_95(CP001081|pid:none) Clostridium botulinum Ba4 str. 65... 87 9e-16
CP000828_2211(CP000828|pid:none) Acaryochloris marina MBIC11017,... 87 9e-16
AP009247_412(AP009247|pid:none) Candidatus Vesicomyosocius okuta... 87 1e-15
CP000903_18(CP000903|pid:none) Bacillus weihenstephanensis KBAB4... 87 1e-15
CP000721_4867(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 87 2e-15
AP008971_621(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 87 2e-15
CP000387_943(CP000387|pid:none) Streptococcus sanguinis SK36, co... 86 2e-15
AL935256_127(AL935256|pid:none) Lactobacillus plantarum strain W... 86 2e-15
BA000033_433(BA000033|pid:none) Staphylococcus aureus subsp. aur... 86 2e-15
CP000113_1890(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 86 3e-15
CP000883_48(CP000883|pid:none) Hemiselmis andersenii chromosome ... 86 3e-15
AY365063_5(AY365063|pid:none) Bacteriophage 44RR2.8t gp46 recomb... 86 3e-15
AP010656_629(AP010656|pid:none) Candidatus Azobacteroides pseudo... 86 3e-15
AY746496_16(AY746496|pid:none) Enterobacteria phage JS98 contig1... 86 3e-15
AM946015_1188(AM946015|pid:none) Streptococcus uberis 0140J comp... 86 3e-15
AE017333_22(AE017333|pid:none) Bacillus licheniformis DSM 13, co... 86 3e-15
AP009351_447(AP009351|pid:none) Staphylococcus aureus subsp. aur... 86 3e-15
BX571856_471(BX571856|pid:none) Staphylococcus aureus subsp. aur... 86 3e-15
AP006716_2534(AP006716|pid:none) Staphylococcus haemolyticus JCS... 86 3e-15
AP008934_2278(AP008934|pid:none) Staphylococcus saprophyticus su... 86 3e-15
AP009324_475(AP009324|pid:none) Staphylococcus aureus subsp. aur... 86 3e-15
CP000253_417(CP000253|pid:none) Staphylococcus aureus subsp. aur... 86 3e-15
AE008691_35(AE008691|pid:none) Thermoanaerobacter tengcongensis ... 86 3e-15
AM270007_9(AM270007|pid:none) Aspergillus niger contig An02c0120... 86 3e-15
AE017348_353(AE017348|pid:none) Cryptococcus neoformans var. neo... 85 4e-15
BX572594_295(BX572594|pid:none) Rhodopseudomonas palustris CGA00... 85 4e-15
CP000140_2024(CP000140|pid:none) Parabacteroides distasonis ATCC... 85 4e-15
CP001251_242(CP001251|pid:none) Dictyoglomus turgidum DSM 6724, ... 85 4e-15
(A2SQR6) RecName: Full=Replication factor C large subunit; ... 85 4e-15
(A1RWU6) RecName: Full=Replication factor C large subunit; ... 85 4e-15
(A0B6D7) RecName: Full=Replication factor C large subunit; ... 85 4e-15
CP001096_616(CP001096|pid:none) Rhodopseudomonas palustris TIE-1... 85 4e-15
(Q9UXF6) RecName: Full=Replication factor C large subunit; ... 85 4e-15
CP000319_450(CP000319|pid:none) Nitrobacter hamburgensis X14, co... 85 4e-15
AC012188_24(AC012188|pid:none) Sequence of BAC F14L17 from Arabi... 85 6e-15
CP000382_2294(CP000382|pid:none) Clostridium novyi NT, complete ... 85 6e-15
CP000236_14(CP000236|pid:none) Ehrlichia chaffeensis str. Arkans... 85 6e-15
CP001472_472(CP001472|pid:none) Acidobacterium capsulatum ATCC 5... 85 6e-15
(O57853) RecName: Full=Replication factor C large subunit; ... 85 6e-15
CP001213_197(CP001213|pid:none) Bifidobacterium animalis subsp. ... 84 8e-15
AM442423_1(AM442423|pid:none) Vitis vinifera contig VV78X040299.... 84 8e-15
CP000431_4154(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 84 8e-15
AM746676_260(AM746676|pid:none) Sorangium cellulosum 'So ce 56' ... 84 1e-14
D64246(D64246;T09749)DNA-directed DNA polymerase (EC 2.7.7.7) II... 84 1e-14
CP001010_558(CP001010|pid:none) Polynucleobacter necessarius sub... 84 1e-14
AP007281_315(AP007281|pid:none) Lactobacillus reuteri JCM 1112 D... 84 1e-14
AP011115_4126(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 84 1e-14
AY596297_2206(AY596297|pid:none) Haloarcula marismortui ATCC 430... 84 1e-14
AM849034_156(AM849034|pid:none) Clavibacter michiganensis subsp.... 84 1e-14
(P04526) RecName: Full=DNA polymerase accessory protein 44; AltN... 84 1e-14
CP000048_443(CP000048|pid:none) Borrelia hermsii DAH, complete g... 84 1e-14
CP000252_78(CP000252|pid:none) Syntrophus aciditrophicus SB, com... 84 1e-14
CP000975_1665(CP000975|pid:none) Methylacidiphilum infernorum V4... 84 1e-14
AP006840_13(AP006840|pid:none) Symbiobacterium thermophilum IAM ... 84 1e-14
EU016564_23(EU016564|pid:none) Uncultured marine microorganism H... 84 1e-14
AE015927_15(AE015927|pid:none) Clostridium tetani E88, complete ... 84 1e-14
T00615(T00615;B84437)DNA polymerase III gamma chain homolog T8K2... 83 2e-14
(Q5JHP1) RecName: Full=Replication factor C large subunit; ... 83 2e-14
CP000930_1118(CP000930|pid:none) Heliobacterium modesticaldum Ic... 83 2e-14
CP001365_2486(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 83 2e-14
CP000850_248(CP000850|pid:none) Salinispora arenicola CNS-205, c... 83 2e-14
GM015893_351(GM015893|pid:none) Sequence 723 from Patent EP19234... 83 2e-14
AP006618_287(AP006618|pid:none) Nocardia farcinica IFM 10152 DNA... 83 2e-14
CT573213_597(CT573213|pid:none) Frankia alni str. ACN14A chromos... 83 2e-14
CP000568_2106(CP000568|pid:none) Clostridium thermocellum ATCC 2... 83 2e-14
AP009178_66(AP009178|pid:none) Nitratiruptor sp. SB155-2 genomic... 83 2e-14
CP000655_696(CP000655|pid:none) Polynucleobacter necessarius sub... 83 2e-14
EU863409_50(EU863409|pid:none) Enterobacteria phage JS10, comple... 82 3e-14
CP000488_418(CP000488|pid:none) Candidatus Ruthia magnifica str.... 82 3e-14
CP000542_502(CP000542|pid:none) Verminephrobacter eiseniae EF01-... 82 4e-14
CP000325_3549(CP000325|pid:none) Mycobacterium ulcerans Agy99, c... 82 4e-14
AP009380_894(AP009380|pid:none) Porphyromonas gingivalis ATCC 33... 82 4e-14
AE015924_1214(AE015924|pid:none) Porphyromonas gingivalis W83, c... 82 4e-14
CP001104_1955(CP001104|pid:none) Eubacterium eligens ATCC 27750,... 82 4e-14
AM422018_622(AM422018|pid:none) Candidatus Phytoplasma australie... 82 4e-14
CP000885_45(CP000885|pid:none) Clostridium phytofermentans ISDg,... 82 4e-14
AL009126_19(AL009126|pid:none) Bacillus subtilis subsp. subtilis... 82 5e-14
X00769_2(X00769|pid:none) Bacteriophage T4 genes 45, 44, 62, reg... 82 5e-14
D26185_83(D26185|pid:none) Bacillus subtilis gene, 180 kilobase ... 82 5e-14
(P09122) RecName: Full=DNA polymerase III subunit gamma/tau; ... 82 5e-14
AL935253_283(AL935253|pid:none) Lactobacillus plantarum strain W... 82 5e-14
CP000115_368(CP000115|pid:none) Nitrobacter winogradskyi Nb-255,... 82 5e-14
X06803_1(X06803|pid:none) Bacillus subtilis DNA for dnaZX-like O... 82 5e-14
CP000728_24(CP000728|pid:none) Clostridium botulinum F str. Lang... 82 5e-14
CP000359_2120(CP000359|pid:none) Deinococcus geothermalis DSM 11... 82 5e-14
AP009389_51(AP009389|pid:none) Pelotomaculum thermopropionicum S... 81 6e-14
AM398681_1313(AM398681|pid:none) Flavobacterium psychrophilum JI... 81 6e-14
(Q9HIP7) RecName: Full=Replication factor C large subunit; ... 81 6e-14
CP000758_20(CP000758|pid:none) Ochrobactrum anthropi ATCC 49188 ... 81 6e-14
CP000813_511(CP000813|pid:none) Bacillus pumilus SAFR-032, compl... 81 6e-14
CP000860_31(CP000860|pid:none) Candidatus Desulforudis audaxviat... 81 6e-14
CP000940_14(CP000940|pid:none) Clostridium botulinum B1 str. Okr... 81 6e-14
(B0R601) RecName: Full=Replication factor C large subunit; ... 81 6e-14
CR626927_1862(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 81 6e-14
CP000269_2330(CP000269|pid:none) Janthinobacterium sp. Marseille... 81 8e-14
AF204951_187(AF204951|pid:none) Ectocarpus siliculosus virus, co... 81 8e-14
CP001337_3104(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 81 8e-14
CP000270_2071(CP000270|pid:none) Burkholderia xenovorans LB400 c... 81 8e-14
CP000159_2497(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 81 8e-14
FJ529691_28(FJ529691|pid:none) Uncultured bacterium URE4 genomic... 81 8e-14
(O64301) RecName: Full=DNA polymerase accessory protein 44; AltN... 81 8e-14
AP006841_1882(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 80 1e-13
A90518(A90518) DNA polymerase III subunit gamma and tau [importe... 80 1e-13
CP000413_952(CP000413|pid:none) Lactobacillus gasseri ATCC 33323... 80 1e-13
BX897699_228(BX897699|pid:none) Bartonella henselae strain Houst... 80 1e-13
CP001034_1758(CP001034|pid:none) Natranaerobius thermophilus JW/... 80 1e-13
CP000386_2390(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 80 1e-13
AE015928_1610(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 80 1e-13
AE000513_2363(AE000513|pid:none) Deinococcus radiodurans R1 chro... 80 1e-13
CP000685_408(CP000685|pid:none) Flavobacterium johnsoniae UW101,... 80 1e-13
CP001147_1040(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 80 2e-13
CP001359_3741(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 80 2e-13
AM412317_30(AM412317|pid:none) Clostridium botulinum A str. ATCC... 80 2e-13
AY343333_30(AY343333|pid:none) Enterobacteria phage RB49, comple... 80 2e-13
CP000962_22(CP000962|pid:none) Clostridium botulinum A3 str. Loc... 80 2e-13
CP001022_17(CP001022|pid:none) Exiguobacterium sibiricum 255-15,... 80 2e-13
CP001131_3664(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 80 2e-13
CP000975_2448(CP000975|pid:none) Methylacidiphilum infernorum V4... 80 2e-13
EU863408_31(EU863408|pid:none) Enterobacteria phage JSE, complet... 80 2e-13
CP000769_3721(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 80 2e-13
CP001503_1372(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 80 2e-13
AP009179_2362(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic ... 80 2e-13
CP001402_1335(CP001402|pid:none) Sulfolobus islandicus M.16.4, c... 80 2e-13
(Q89A95) RecName: Full=DNA polymerase III subunit gamma; ... 80 2e-13
CP000792_27(CP000792|pid:none) Campylobacter concisus 13826, com... 79 2e-13
CP000249_263(CP000249|pid:none) Frankia sp. CcI3, complete genome. 79 2e-13
CP000524_1148(CP000524|pid:none) Bartonella bacilliformis KC583,... 79 2e-13
CP000478_2763(CP000478|pid:none) Syntrophobacter fumaroxidans MP... 79 2e-13
CP000804_2237(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 79 2e-13
CP000473_3126(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 79 2e-13
AE010300_4328(AE010300|pid:none) Leptospira interrogans serovar ... 79 3e-13
CP001400_1235(CP001400|pid:none) Sulfolobus islandicus M.14.25, ... 79 3e-13
AM446146_4(AM446146|pid:none) Vitis vinifera contig VV78X111916.... 79 3e-13
AE014184_710(AE014184|pid:none) Tropheryma whipplei str. Twist, ... 79 4e-13
>(Q54ST4) RecName: Full=Probable replication factor C subunit 5;
AltName: Full=Activator 1 subunit 5;
Length = 347
Score = 660 bits (1702), Expect(2) = 0.0
Identities = 333/338 (98%), Positives = 334/338 (98%)
Frame = +3
Query: 63 MEIDMADKTNKFKTDIERKQFESLPWVEKYRPKNLDDLIAHEDITQTITKLIDNNTLPHL 242
MEIDMADKTNKFKTDIERKQFESLPWVEKYRPKNLDDLIAHEDITQTITKLIDNNTLPHL
Sbjct: 1 MEIDMADKTNKFKTDIERKQFESLPWVEKYRPKNLDDLIAHEDITQTITKLIDNNTLPHL 60
Query: 243 LFYGPPGTGKTSTIQAIARKLYGDNYSRMVLELNASDDRGIDVVREQIKTFASSMFFFNT 422
LFYGPPGTGKTSTIQAIARKLYGDNYSRMVLELNASDDRGIDVVREQIKTFASSMFFFNT
Sbjct: 61 LFYGPPGTGKTSTIQAIARKLYGDNYSRMVLELNASDDRGIDVVREQIKTFASSMFFFNT 120
Query: 423 TVPYKLIILDEADSMTNIAQTALRRVIEKYTKTTRFCIVCNYVIKIIPALQSRCTRFRFS 602
TVPYKLIILDEADSMTNIAQTALRRVIEKYTKTTRFCIVCNYVIKIIPALQSRCTRFRFS
Sbjct: 121 TVPYKLIILDEADSMTNIAQTALRRVIEKYTKTTRFCIVCNYVIKIIPALQSRCTRFRFS 180
Query: 603 PLPTPPTEIRLKEIIEKENVKVDSKAMNAVLELGCGDMRKCLNILQSVSMSSIDNNITEE 782
PLPTPPTEIRLKEIIEKENVKVDSKAMNAVLELGCGDMRKCLNILQSVSMSSIDNNITEE
Sbjct: 181 PLPTPPTEIRLKEIIEKENVKVDSKAMNAVLELGCGDMRKCLNILQSVSMSSIDNNITEE 240
Query: 783 AIYKCTGYPMPSDIELMVDWLLNSDYEEAFQNISDLKKKKGLSLNDIIATLQKFVVQIDL 962
AIYKCTGYPMPSDIELMVDWLLNSDYEEAFQNISDLKKKKGLSLNDIIATLQKFVVQIDL
Sbjct: 241 AIYKCTGYPMPSDIELMVDWLLNSDYEEAFQNISDLKKKKGLSLNDIIATLQKFVVQIDL 300
Query: 963 DNVILCKLLSHLSDIEYNLSIGSSEKLQLGSLSWLFSI 1076
DNVILCKLLSHLSDIEYNLSIGSSEKLQLGSL F +
Sbjct: 301 DNVILCKLLSHLSDIEYNLSIGSSEKLQLGSLVGCFQL 338
Score = 35.4 bits (80), Expect(2) = 0.0
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 1057 LVGCFQLSRDDELLH 1101
LVGCFQLSRDDELLH
Sbjct: 332 LVGCFQLSRDDELLH 346
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,483,720,219
Number of extensions: 26586150
Number of successful extensions: 109077
Number of sequences better than 10.0: 2793
Number of HSP's gapped: 107649
Number of HSP's successfully gapped: 2847
Length of query: 402
Length of database: 1,040,966,779
Length adjustment: 131
Effective length of query: 271
Effective length of database: 621,205,444
Effective search space: 168346675324
Effective search space used: 168346675324
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
2 |
| AH (FL, L) |
0 |
| AF (FL, S) |
1 |
| SL (DIR, L) |
1 |
| SS (DIR, S) |
1 |
| SH (FL, L) |
0 |
| SF (FL, S) |
1 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |