Contig-U09813-1 |
Contig ID |
Contig-U09813-1 |
Contig update |
2002. 9.13 |
Contig sequence |
|
Gap |
gap included |
Contig length |
720 |
Chromosome number (1..6, M) |
2 |
Chromosome length |
8467578 |
Start point |
1630625 |
End point |
1631347 |
Strand (PLUS/MINUS) |
PLUS |
Number of clones |
1 |
Number of EST |
2 |
Link to clone list |
U09813 |
List of clone(s) |
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.10 |
Homology vs CSM-cDNA |
|
dna update |
2008.11.18 |
Homology vs DNA |
Query= Contig-U09813-1 (Contig-U09813-1Q) /CSM_Contig/Contig-U09813-1Q.Seq.d (730 letters)
Database: ddbj_A 92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(AU269009) Dictyostelium discoideum vegetative cDNA clone:VS... 1156 0.0 1 (AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 537 0.0 4 (AU269008) Dictyostelium discoideum vegetative cDNA clone:VS... 133 1e-26 1 (FH525447) CHO_OF4800xl13f1.ab1 CHO_OF4 Nicotiana tabacum ge... 42 0.009 3 (FE243647) CAPG7756.fwd CAPG Naegleria gruberi amoeba stage ... 40 0.024 2 (FE235415) CAPG3348.fwd CAPG Naegleria gruberi amoeba stage ... 40 0.024 2 (CR382400) Plasmodium falciparum chromosome 6, complete sequ... 38 0.076 10 (BM170805) EST573328 PyBS Plasmodium yoelii yoelii cDNA clon... 38 0.092 2 (AC161969) Bos taurus clone CH240-108J16, WORKING DRAFT SEQU... 40 0.26 3 (DC230498) Plasmodium berghei strain ANKA cDNA clone:SG01882... 38 0.35 2 (CR848717) Zebrafish DNA sequence from clone DKEY-148B12 in ... 48 0.47 1 (CR847795) Human DNA sequence *** SEQUENCING CANCELLED *** f... 48 0.47 1 (AC169576) Bos taurus clone CH240-198N19, WORKING DRAFT SEQU... 48 0.47 1 (AC095065) Homo sapiens BAC clone RP11-648P3 from 4, complet... 40 0.49 2 (AC160583) Atelerix albiventris clone LB4-152N11, WORKING DR... 36 0.98 2 (AC175224) Atelerix albiventris clone LB4-33H20, WORKING DRA... 36 0.98 2 (AC218483) Bos taurus clone CH240-313P3, WORKING DRAFT SEQUE... 40 1.0 4 (AC004710) Plasmodium falciparum chromosome 12, *** SEQUENCI... 36 1.0 6 (DU268640) 1098589000760 CHORI-243 Ovis aries genomic clone ... 42 1.0 2 (AJ821286) Theileria annulata EST, clone C0005205o7. 38 1.2 2 (AC121513) Mus musculus chromosome 18, clone RP24-391B9, com... 46 1.8 1 (AC183294) Pan troglodytes BAC clone CH251-545A24 from chrom... 46 1.8 1 (AP008211) Oryza sativa (japonica cultivar-group) genomic DN... 46 1.8 1 (AC135429) Oryza sativa Japonica Group chromosome 5 clone P0... 46 1.8 1 (AC130600) Oryza sativa Japonica Group chromosome 5 clone OS... 46 1.8 1 (Z79999) Human DNA sequence from clone CITF22-111A3 on chrom... 46 1.8 1 (AC107982) Homo sapiens chromosome 17, clone CTD-2145A24, co... 46 1.8 1 (AC018989) Homo sapiens chromosome 17, clone RP11-273K13, co... 46 1.8 1 (AC005324) Homo sapiens chromosome 17, clone hRPK.640_I_15, ... 46 1.8 1 (AC145825) Pan troglodytes clone rp43-37f24, WORKING DRAFT S... 46 1.8 1 (AC107931) Homo sapiens chromosome 17 clone RP11-466H1 map 1... 46 1.8 1 (AC095241) Rattus norvegicus clone CH230-10D18, *** SEQUENCI... 46 1.8 1 (AC026964) Homo sapiens chromosome 17 clone RP11-304M13 map ... 46 1.8 1 (AC219884) Bos taurus clone CH240-319E21, WORKING DRAFT SEQU... 46 1.8 1 (AC214902) Pan troglodytes clone rp43-10a18, WORKING DRAFT S... 46 1.8 1 (AC213551) Equus caballus clone CH241-324L16, WORKING DRAFT ... 46 1.8 1 (AC181872) Strongylocentrotus purpuratus clone R3-1019I3, WO... 46 1.8 1 (AC163897) Medicago truncatula chromosome 7 clone mth2-58l23... 46 1.8 1 (AZ344987) 1M0079M18F Mouse 10kb plasmid UUGC1M library Mus ... 46 1.8 1 (ER332534) 1092344275583 Global-Ocean-Sampling_GS-34-01-01-1... 46 1.8 1 (EJ166697) 1092344068277 Global-Ocean-Sampling_GS-27-01-01-1... 46 1.8 1 (EJ039117) 1095454084142 Global-Ocean-Sampling_GS-26-01-01-1... 46 1.8 1 (EI366343) R_763 High C+G patch (HCGP) library Oryza sativa ... 46 1.8 1 (AJ864683) Orpinomyces sp. OUS1 GSS, clone E2-41. 46 1.8 1 (CR957662) Homo sapiens PAC end sequence of RZPDB737A085D fr... 46 1.8 1 (CE836995) tigr-gss-dog-17000332593670 Dog Library Canis lup... 46 1.8 1 (DT950151) CFW107-G01.y1d-s SHGC-CFW Gasterosteus aculeatus ... 46 1.8 1 (AM054158) Eudiplodinium maggii EST, clone Em05_B01. 46 1.8 1 (BY914221) Bombyx mori cDNA, clone:E_ET_an--_04E03_F_0, 5' e... 46 1.8 1 (BY914212) Bombyx mori cDNA, clone:E_ET_an--_04D05_F_0, 5' e... 46 1.8 1 (AW136035) UI-H-BI1-adn-f-12-0-UI.s1 NCI_CGAP_Sub3 Homo sapi... 46 1.8 1 (CP000825) Prochlorococcus marinus str. MIT 9215, complete g... 46 1.8 1 (CP000576) Prochlorococcus marinus str. MIT 9301, complete g... 46 1.8 1 (CP000551) Prochlorococcus marinus str. AS9601, complete gen... 46 1.8 1 (CP000111) Prochlorococcus marinus str. MIT 9312, complete g... 46 1.8 1 (AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 46 1.8 1 (AE014818) Plasmodium falciparum 3D7 chromosome 14 section 3... 38 1.9 9 (AC123640) Mus musculus chromosome 15, clone RP23-11D17, com... 34 1.9 5 (CS468878) Sequence 69 from Patent EP1748080. 42 2.0 6 (CS419355) Sequence 69 from Patent WO2006094836. 42 2.0 6 (DE306051) Bombyx mori genomic DNA, BAC clone:BES_072_D21. 38 2.2 2 (BP886208) Solanum lycopersicum cDNA, clone: FA33DE07, 5' en... 42 2.3 2 (BP878365) Solanum lycopersicum cDNA, clone: FA11CC05, 5' en... 42 2.6 2 (DE587762) Bombyx mori genomic DNA, Fosmid clone:GBMFno240_g... 38 3.0 2 (DE306035) Bombyx mori genomic DNA, BAC clone:BES_072_C22. 38 3.1 2 (FG203060) AGN_PNL233cr1_h6.trimmed.seq AGN_PNL Nicotiana ta... 42 3.6 2 (BZ673412) PUBAQ03TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 34 3.7 2 (CL905012) OA_ABa0003A10.r OA_ABa Oryza australiensis genomi... 36 3.7 2 (ET078247) QM0AAB6BE01RM2 CCER1 Citrus clementina genomic cl... 38 3.9 2 (FH942871) CHO_OF6732xn14f1.ab1 CHO_OF6 Nicotiana tabacum ge... 42 4.0 2 (AY159038) Dictyostelium discoideum LvsB (lvsB) gene, comple... 38 4.1 2 (AM437171) Vitis vinifera, whole genome shotgun sequence, co... 34 4.1 2 (BW691695) Solanum lycopersicum cDNA, clone: FC23AG02, 5' en... 42 4.2 2 (DU853843) 57571 Tomato HindIII BAC Library Solanum lycopers... 38 4.4 2 (FH740687) CHO_OF5152xg14r1.ab1 CHO_OF5 Nicotiana tabacum ge... 36 4.4 2 (AC156670) Bos taurus clone CH240-60K24, WORKING DRAFT SEQUE... 36 4.5 3 (FG724292) G1144P341RH20.T0 Anolis carolinensis pooled norma... 36 4.6 3 (AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 38 4.6 11 (BE561984) 601346754F1 NIH_MGC_8 Homo sapiens cDNA clone IMA... 32 4.6 2 (AE014820) Plasmodium falciparum 3D7 chromosome 14 section 5... 36 4.9 9 (AC109733) Rattus norvegicus clone CH230-325E4, *** SEQUENCI... 36 5.0 5 (CR911971) Sus scrofa BES. 32 5.2 3 (AC178500) Strongylocentrotus purpuratus clone R3-3032L5, WO... 44 5.3 4 (AK246760) Solanum lycopersicum cDNA, clone: FC23AG02, HTC i... 42 5.6 2 (AX344571) Sequence 22 from Patent WO0200932. 38 5.9 4 (CT476823) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 6.1 6 (BX664752) Zebrafish DNA sequence from clone DKEYP-111E5 in ... 42 6.5 5 (AC176498) Strongylocentrotus purpuratus clone R3-3072G15, W... 38 6.9 5 (CR392347) Zebrafish DNA sequence from clone DKEY-37G12 in l... 44 7.3 1 (BX649538) Zebrafish DNA sequence from clone CH211-239N21 in... 44 7.3 1 (BX005349) Zebrafish DNA sequence from clone DKEY-111D8 in l... 44 7.3 1 (AL935273) Zebrafish DNA sequence from clone CH211-274L13. 44 7.3 1 (AL772133) Zebrafish DNA sequence from clone CH211-121J5 in ... 44 7.3 1 (AC157745) Xenopus tropicalis clone ISB1-79H24, complete seq... 44 7.3 1 (AC138452) Medicago truncatula chromosome 8 clone mth2-17p11... 44 7.3 1 (AF081584) Dictyostelium discoideum developmental protein Gb... 44 7.3 1 (AC080136) Homo sapiens 12 BAC RP11-804E10 (Roswell Park Can... 44 7.3 1 (AC025278) Homo sapiens chromosome 19 clone RP11-1137G4, com... 44 7.3 1 (AC020895) Homo sapiens chromosome 19 clone CTC-312O10, comp... 44 7.3 1 (AC005854) Homo sapiens, complete sequence. 44 7.3 1
>(AU269009) Dictyostelium discoideum vegetative cDNA clone:VSI640, 3' end single read. Length = 616
Score = 1156 bits (583), Expect = 0.0 Identities = 583/583 (100%) Strand = Plus / Plus
Query: 148 gtagtaatcctaaaactccaaatggaaaagaaggtggattaccagatctaaataataact 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33 gtagtaatcctaaaactccaaatggaaaagaaggtggattaccagatctaaataataact 92
Query: 208 gcccagtttgcggtatttcatttaaatctattggaaaggattggccatcaattaataaac 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93 gcccagtttgcggtatttcatttaaatctattggaaaggattggccatcaattaataaac 152
Query: 268 atatcgatgaatgtttaacctttaatttattggataaagagacattagatccaaaagcca 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 atatcgatgaatgtttaacctttaatttattggataaagagacattagatccaaaagcca 212
Query: 328 aatcaacaactattaaatgtccttacagtggatgtaaaaagtcaatgacaacagtagaat 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 aatcaacaactattaaatgtccttacagtggatgtaaaaagtcaatgacaacagtagaat 272
Query: 388 ttataaatcattgtaatgaaaagcatttgctagacgatgttcataattataagtgtcctt 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 ttataaatcattgtaatgaaaagcatttgctagacgatgttcataattataagtgtcctt 332
Query: 448 tatgtaatgaaaagtcaccaaatttaattagccatctaagtaaaacacatataagggttc 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 333 tatgtaatgaaaagtcaccaaatttaattagccatctaagtaaaacacatataagggttc 392
Query: 508 aacaaaaacaagttggtgttggttattcaacaagtgtacttgaaaatgatttaagtgaag 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 aacaaaaacaagttggtgttggttattcaacaagtgtacttgaaaatgatttaagtgaag 452
Query: 568 atattgaatgtccaatttgtcttgaagagttcacaaaaggtcaaaatgtggcccgtttag 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 atattgaatgtccaatttgtcttgaagagttcacaaaaggtcaaaatgtggcccgtttag 512
Query: 628 aatgttggtgcatatttcatacaaattgtatttctgaatatttattaaaatcaaagaaat 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 513 aatgttggtgcatatttcatacaaattgtatttctgaatatttattaaaatcaaagaaat 572
Query: 688 gcccagtccataattaacttatttaaaaagaagaacaaaaata 730 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 gcccagtccataattaacttatttaaaaagaagaacaaaaata 615
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 92845959 Number of Hits to DB: 867,669,259 Number of extensions: 54897792 Number of successful extensions: 4509740 Number of sequences better than 10.0: 146 Length of query: 730 Length of database: 95,242,211,685 Length adjustment: 24 Effective length of query: 706 Effective length of database: 97,308,875,965 Effective search space: 68700066431290 Effective search space used: 68700066431290 X1: 11 (21.8 bits) S2: 22 (44.1 bits)
|
protein update |
2009. 6.26 |
Homology vs Protein |
Query= Contig-U09813-1 (Contig-U09813-1Q) /CSM_Contig/Contig-U09813-1Q.Seq.d (730 letters)
Database: nrp_A 3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
(Q08CN9) RecName: Full=E3 ubiquitin-protein ligase ZNRF2; ... 64 4e-09 (Q91V17) RecName: Full=E3 ubiquitin-protein ligase ZNRF1; ... 64 5e-09 (Q8ND25) RecName: Full=E3 ubiquitin-protein ligase ZNRF1; ... 64 5e-09 AX961900_1(AX961900|pid:none) Sequence 111 from Patent WO03104277. 64 5e-09 AY054122_1(AY054122|pid:none) Homo sapiens Ells2 mRNA, partial c... 64 6e-09 (Q8NHG8) RecName: Full=E3 ubiquitin-protein ligase ZNRF2; ... 64 6e-09 BC047964_1(BC047964|pid:none) Xenopus laevis nerve injury gene 2... 62 1e-08 AC024200_2(AC024200|pid:none) Caenorhabditis elegans cosmid Y71F... 62 2e-08 CR380954_315(CR380954|pid:none) Candida glabrata strain CBS138 c... 59 2e-07 BC104316_1(BC104316|pid:none) Mus musculus zinc and ring finger ... 58 3e-07 BC150372_1(BC150372|pid:none) Danio rerio zgc:171663, mRNA (cDNA... 57 6e-07 CU424444_2(CU424444|pid:none) Zebrafish DNA sequence from clone ... 57 6e-07 AM920436_1336(AM920436|pid:none) Penicillium chrysogenum Wiscons... 56 1e-06 BC057533_1(BC057533|pid:none) Danio rerio zgc:66427, mRNA (cDNA ... 56 1e-06 AK030575_1(AK030575|pid:none) Mus musculus adult male pituitary ... 55 2e-06 AX399852_1(AX399852|pid:none) Sequence 23 from Patent WO0218424. 55 2e-06 CR382137_328(CR382137|pid:none) Debaryomyces hansenii strain CBS... 55 2e-06 CP000497_464(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 54 6e-06 FB874628_1(FB874628|pid:none) Sequence 93901 from Patent WO20080... 52 2e-05 AC148528_12(AC148528|pid:none) Medicago truncatula clone mth2-53... 52 2e-05 AE016814_148(AE016814|pid:none) Ashbya gossypii (= Eremothecium ... 52 2e-05 AK226506_1(AK226506|pid:none) Arabidopsis thaliana mRNA for hypo... 51 3e-05 CU928170_294(CU928170|pid:none) Kluyveromyces thermotolerans str... 51 3e-05 AF424605_1(AF424605|pid:none) Arabidopsis thaliana AT4g31450/F3L... 51 3e-05 BC133164_1(BC133164|pid:none) Danio rerio cDNA clone MGC:158807 ... 51 4e-05 CR848559_1(CR848559|pid:none) Xenopus tropicalis finished cDNA, ... 50 7e-05 AK122819_1(AK122819|pid:none) Homo sapiens cDNA FLJ16418 fis, cl... 50 7e-05 (Q6ZSG1) RecName: Full=RING finger protein 165; &AK127467_1(AK1... 50 7e-05 (Q6DIP3) RecName: Full=RING finger protein 126; &BC075492_1(BC0... 50 7e-05 BT066938_1(BT066938|pid:none) Zea mays full-length cDNA clone ZM... 50 9e-05 AY088181_1(AY088181|pid:none) Arabidopsis thaliana clone 426 mRN... 50 9e-05 AB006707_12(AB006707|pid:none) Arabidopsis thaliana genomic DNA,... 50 9e-05 CU928175_592(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 49 1e-04 BT064086_1(BT064086|pid:none) Zea mays full-length cDNA clone ZM... 49 1e-04 AK095327_1(AK095327|pid:none) Homo sapiens cDNA FLJ38008 fis, cl... 49 2e-04 BC010369_1(BC010369|pid:none) Homo sapiens ring finger protein 1... 49 2e-04 BC147931_1(BC147931|pid:none) Bos taurus ring finger protein 111... 49 2e-04 AX405832_1(AX405832|pid:none) Sequence 247 from Patent WO0222660. 49 2e-04 (Q5R476) RecName: Full=E3 ubiquitin-protein ligase Arkadia; ... 49 2e-04 (Q6IRP0) RecName: Full=RING finger protein 126-B; &BC070697_1(B... 49 2e-04 (Q6ZNA4) RecName: Full=E3 ubiquitin-protein ligase Arkadia; ... 49 2e-04 (Q9CY62) RecName: Full=RING finger protein 181; &AK010854_1(AK0... 49 2e-04 AK018849_1(AK018849|pid:none) Mus musculus adult male testis cDN... 49 2e-04 AK048110_1(AK048110|pid:none) Mus musculus 16 days embryo head c... 49 2e-04 (Q99ML9) RecName: Full=E3 ubiquitin-protein ligase Arkadia; ... 49 2e-04 AF329846_1(AF329846|pid:none) Gallus gallus ring finger protein ... 49 2e-04 AL157474_1(AL157474|pid:none) Homo sapiens mRNA; cDNA DKFZp761D0... 49 2e-04 AK131488_1(AK131488|pid:none) Homo sapiens cDNA FLJ16671 fis, cl... 49 2e-04 AL731620_5(AL731620|pid:none) Oryza sativa genomic DNA, chromoso... 49 2e-04 (Q6NRV8) RecName: Full=E3 ubiquitin-protein ligase arkadia-B; ... 49 2e-04 (Q91YL2) RecName: Full=RING finger protein 126; &AK154781_1(AK1... 49 2e-04 AK131304_1(AK131304|pid:none) Homo sapiens cDNA FLJ16278 fis, cl... 49 2e-04 (Q7T0Q3) RecName: Full=RING finger protein 126-A; &BC056088_1(B... 49 2e-04 (Q66J97) RecName: Full=E3 ubiquitin-protein ligase arkadia-C; ... 48 3e-04 BX538130_1(BX538130|pid:none) Homo sapiens mRNA; cDNA DKFZp686H1... 48 3e-04 CT573450_1(CT573450|pid:none) Zebrafish DNA sequence from clone ... 48 3e-04 BC166566_1(BC166566|pid:none) Rattus norvegicus ring finger prot... 48 3e-04 AK133955_1(AK133955|pid:none) Mus musculus 8 days embryo whole b... 48 3e-04 (Q90ZT7) RecName: Full=E3 ubiquitin-protein ligase arkadia-A; ... 48 3e-04 AK014094_1(AK014094|pid:none) Mus musculus 13 days embryo head c... 48 3e-04 BC099810_1(BC099810|pid:none) Rattus norvegicus ring finger prot... 48 3e-04 (Q6AXU4) RecName: Full=RING finger protein 181; &BC079313_1(BC0... 48 3e-04 AC141107_35(AC141107|pid:none) Medicago truncatula clone mth2-34... 48 4e-04 AK066069_1(AK066069|pid:none) Oryza sativa Japonica Group cDNA c... 47 5e-04 BT056001_1(BT056001|pid:none) Zea mays full-length cDNA clone ZM... 47 5e-04 AL606622_9(AL606622|pid:none) Oryza sativa genomic DNA, chromoso... 47 5e-04 FJ225394_3(FJ225394|pid:none) Glycine max clone GM_WBb0070A12 de... 47 5e-04 BT071744_1(BT071744|pid:none) Picea sitchensis clone WS0451_G15 ... 47 6e-04 CR954206_431(CR954206|pid:none) Ostreococcus tauri strain OTTH05... 47 6e-04 (Q7ZW78) RecName: Full=RING finger protein 181; &CU041374_16(CU... 47 8e-04 AC135467_5(AC135467|pid:none) Medicago truncatula clone mth2-34h... 47 8e-04 AM462015_2(AM462015|pid:none) Vitis vinifera contig VV78X029871.... 47 8e-04 (Q3T0W3) RecName: Full=RING finger protein 181; &BC102230_1(BC1... 47 8e-04 AF079183_1(AF079183|pid:none) Arabidopsis thaliana RING-H2 finge... 47 8e-04 BT015305_1(BT015305|pid:none) Drosophila melanogaster AT15166 fu... 47 8e-04 AK000559_1(AK000559|pid:none) Homo sapiens cDNA FLJ20552 fis, cl... 47 8e-04 AB008264_13(AB008264|pid:none) Arabidopsis thaliana genomic DNA,... 47 8e-04 AC144514_21(AC144514|pid:none) Medicago truncatula clone mth2-12... 47 8e-04 (Q9BV68) RecName: Full=RING finger protein 126; &BC001442_1(BC0... 47 8e-04 AE014297_1407(AE014297|pid:none) Drosophila melanogaster chromos... 47 8e-04 CR861158_1(CR861158|pid:none) Pongo abelii mRNA; cDNA DKFZp459L1... 46 0.001 CR940352_90(CR940352|pid:none) Theileria annulata strain Ankara ... 46 0.001 AL831752_2(AL831752|pid:none) Mouse DNA sequence from clone RP23... 46 0.001 AL157699_3(AL157699|pid:none) Human DNA sequence from clone RP13... 46 0.001 AK135382_1(AK135382|pid:none) Mus musculus 12 days embryo female... 46 0.001 BC081885_1(BC081885|pid:none) Rattus norvegicus similar to praja... 46 0.001 BT041832_1(BT041832|pid:none) Zea mays full-length cDNA clone ZM... 46 0.001 AK290543_1(AK290543|pid:none) Homo sapiens cDNA FLJ78308 complet... 46 0.001 AF264620_1(AF264620|pid:none) Homo sapiens PRAJA1BETA (PRAJA1BET... 46 0.001 AK294632_1(AK294632|pid:none) Homo sapiens cDNA FLJ55052 complet... 46 0.001 AK096611_1(AK096611|pid:none) Homo sapiens cDNA FLJ39292 fis, cl... 46 0.001 AK005373_1(AK005373|pid:none) Mus musculus adult male cerebellum... 46 0.001 AE014135_67(AE014135|pid:none) Drosophila melanogaster chromosom... 46 0.001 (O55176) RecName: Full=E3 ubiquitin-protein ligase Praja1; ... 46 0.001 AL831752_1(AL831752|pid:none) Mouse DNA sequence from clone RP23... 46 0.001 AK021892_1(AK021892|pid:none) Homo sapiens cDNA FLJ11830 fis, cl... 46 0.001 BT026528_1(BT026528|pid:none) Bos taurus praja 1 (PJA1), mRNA, c... 46 0.001 AF335251_1(AF335251|pid:none) Mus musculus Praja1 isoform c (Pja... 46 0.001 DQ415920_18(DQ415920|pid:none) Cleome spinosa clone BAC Cs3, com... 46 0.001 AB171443_1(AB171443|pid:none) Macaca fascicularis brain cDNA clo... 46 0.001 AK293266_1(AK293266|pid:none) Homo sapiens cDNA FLJ53433 complet... 46 0.001 AM467682_1(AM467682|pid:none) Vitis vinifera contig VV78X221997.... 46 0.001 EU961756_1(EU961756|pid:none) Zea mays clone 238102 unknown mRNA. 46 0.001 AC002409_3(AC002409|pid:none) Arabidopsis thaliana chromosome 2 ... 46 0.001 EF083336_1(EF083336|pid:none) Picea sitchensis clone WS0289_N02 ... 46 0.001 AK120070_1(AK120070|pid:none) Oryza sativa Japonica Group cDNA c... 46 0.001 AM469216_4(AM469216|pid:none) Vitis vinifera contig VV78X201907.... 46 0.001 EU969154_1(EU969154|pid:none) Zea mays clone 326453 unknown mRNA. 45 0.002 AK008329_1(AK008329|pid:none) Mus musculus adult male small inte... 45 0.002 AC091774_10(AC091774|pid:none) Oryza sativa chromosome 6 BAC OJ1... 45 0.002 BT062474_1(BT062474|pid:none) Zea mays full-length cDNA clone ZM... 45 0.002 BC048323_1(BC048323|pid:none) Homo sapiens praja ring finger 1, ... 45 0.002 EU824032_1(EU824032|pid:none) Populus tremula isolate swl312-76 ... 45 0.002 BT051302_1(BT051302|pid:none) Medicago truncatula clone MTYF1_F2... 45 0.002 BT067018_1(BT067018|pid:none) Zea mays full-length cDNA clone ZM... 45 0.002 AK000322_1(AK000322|pid:none) Homo sapiens cDNA FLJ20315 fis, cl... 45 0.002 BT066953_1(BT066953|pid:none) Zea mays full-length cDNA clone ZM... 45 0.002 AK291027_1(AK291027|pid:none) Homo sapiens cDNA FLJ77466 complet... 45 0.002 AK296769_1(AK296769|pid:none) Homo sapiens cDNA FLJ50102 complet... 45 0.002 CR627423_1(CR627423|pid:none) Homo sapiens mRNA; cDNA DKFZp781H0... 45 0.002 AK299024_1(AK299024|pid:none) Homo sapiens cDNA FLJ51697 complet... 45 0.002 (Q68DV7) RecName: Full=RING finger protein 43; Flags: Precursor;... 45 0.002 AB081837_1(AB081837|pid:none) Homo sapiens urcc mRNA, complete c... 45 0.002 BT068134_1(BT068134|pid:none) Zea mays full-length cDNA clone ZM... 45 0.002 (Q9P0P0) RecName: Full=RING finger protein 181; &AC016753_5(AC0... 45 0.003 AC006248_7(AC006248|pid:none) Arabidopsis thaliana chromosome 2 ... 45 0.003 AK070491_1(AK070491|pid:none) Oryza sativa Japonica Group cDNA c... 45 0.003 AM883105_1(AM883105|pid:none) Spinacia oleracea mRNA for NEP1-in... 45 0.003 EU963676_1(EU963676|pid:none) Zea mays clone 265678 RHC1A mRNA, ... 45 0.003 (Q9Y4L5) RecName: Full=RING finger protein 115; AltName: Full=Zi... 45 0.003 AL079314_1(AL079314|pid:none) Homo sapiens mRNA full length inse... 45 0.003 AM473198_1(AM473198|pid:none) Vitis vinifera contig VV78X021532.... 45 0.003 DQ213806_1(DQ213806|pid:none) Taeniopygia guttata clone 0061P001... 44 0.004 AL022223_17(AL022223|pid:none) Arabidopsis thaliana DNA chromoso... 44 0.004 FB874642_1(FB874642|pid:none) Sequence 93915 from Patent WO20080... 44 0.004 (Q9FIR0) RecName: Full=Putative RING-H2 finger protein ATL5L; &... 44 0.004 AC011809_11(AC011809|pid:none) Arabidopsis thaliana chromosome I... 44 0.004 EU824031_1(EU824031|pid:none) Populus tremula isolate swl312-75 ... 44 0.004 EU824016_1(EU824016|pid:none) Populus tremula isolate swl312-14 ... 44 0.004 BT061449_1(BT061449|pid:none) Zea mays full-length cDNA clone ZM... 44 0.004 EU824036_1(EU824036|pid:none) Populus tremula isolate swl312-85 ... 44 0.004 BT052350_1(BT052350|pid:none) Medicago truncatula clone MTYFD_FE... 44 0.004 EU824051_1(EU824051|pid:none) Populus tremula isolate swl312-64E... 44 0.004 EF147412_1(EF147412|pid:none) Populus trichocarpa clone WS01230_... 44 0.004 AC135462_17(AC135462|pid:none) Medicago truncatula clone mth2-35... 44 0.004 AM445444_2(AM445444|pid:none) Vitis vinifera contig VV78X011470.... 44 0.004 BT074946_1(BT074946|pid:none) Osmerus mordax clone omor-eva-511-... 44 0.004 AM454201_1(AM454201|pid:none) Vitis vinifera contig VV79X002445.... 44 0.004 BT071558_1(BT071558|pid:none) Picea sitchensis clone WS02924_J14... 44 0.004 EU824014_1(EU824014|pid:none) Populus tremula isolate swl312-3 t... 44 0.004 BT037305_1(BT037305|pid:none) Zea mays full-length cDNA clone ZM... 44 0.005 FB817272_1(FB817272|pid:none) Sequence 36545 from Patent WO20080... 44 0.005 EU960604_1(EU960604|pid:none) Zea mays clone 226548 protein bind... 44 0.005 AL031620_5(AL031620|pid:none) Caenorhabditis elegans Cosmid C18B... 44 0.005 CP001331_84(CP001331|pid:none) Micromonas sp. RCC299 chromosome ... 44 0.005 AC004473_23(AC004473|pid:none) Arabidopsis thaliana chromosome 1... 44 0.005 BT023885_1(BT023885|pid:none) Drosophila melanogaster RE59544 fu... 44 0.005 AK227950_1(AK227950|pid:none) Arabidopsis thaliana mRNA for RING... 44 0.005 AC006300_6(AC006300|pid:none) Arabidopsis thaliana chromosome 2 ... 44 0.005 DQ415922_14(DQ415922|pid:none) Cleome spinosa clone BAC Cs1, com... 44 0.005 AC079674_7(AC079674|pid:none) Arabidopsis thaliana chromosome 1 ... 44 0.005 (P87139) RecName: Full=Uncharacterized RING finger protein C57A7... 44 0.007 AP002521_8(AP002521|pid:none) Oryza sativa Japonica Group genomi... 44 0.007 BT053897_1(BT053897|pid:none) Zea mays full-length cDNA clone ZM... 44 0.007 AK317090_1(AK317090|pid:none) Arabidopsis thaliana AT5G10650 mRN... 44 0.007 (Q8LE94) RecName: Full=E3 ubiquitin-protein ligase At3g02290; ... 44 0.007 AC135606_14(AC135606|pid:none) Medicago truncatula clone mth2-10... 44 0.007 AK060092_1(AK060092|pid:none) Oryza sativa Japonica Group cDNA c... 44 0.007 AM433861_1(AM433861|pid:none) Vitis vinifera contig VV78X073759.... 44 0.007 AK073728_1(AK073728|pid:none) Oryza sativa Japonica Group cDNA c... 44 0.007 AM463545_1(AM463545|pid:none) Vitis vinifera contig VV78X191796.... 44 0.007 AY045983_1(AY045983|pid:none) Arabidopsis thaliana unknown prote... 44 0.007 AY099680_1(AY099680|pid:none) Arabidopsis thaliana Pspzf zinc fi... 44 0.007 AC011708_11(AC011708|pid:none) Arabidopsis thaliana chromosome I... 44 0.007 EU970593_1(EU970593|pid:none) Zea mays clone 347660 zinc finger,... 44 0.007 AB017069_3(AB017069|pid:none) Arabidopsis thaliana genomic DNA, ... 44 0.007 BT015918_1(BT015918|pid:none) Arabidopsis thaliana At5g10650 gen... 44 0.007 AK117391_1(AK117391|pid:none) Arabidopsis thaliana At3g47990 mRN... 43 0.009 BT066596_1(BT066596|pid:none) Zea mays full-length cDNA clone ZM... 43 0.009 AC013482_19(AC013482|pid:none) Genomic sequence for Arabidopsis ... 43 0.009 AC137823_24(AC137823|pid:none) Medicago truncatula clone mth2-14... 43 0.009 AC009755_5(AC009755|pid:none) Arabidopsis thaliana chromosome II... 43 0.009 AK071468_1(AK071468|pid:none) Oryza sativa Japonica Group cDNA c... 43 0.009 BC079688_1(BC079688|pid:none) Xenopus laevis MGC80300 protein, m... 43 0.009 CR954217_56(CR954217|pid:none) Ostreococcus tauri strain OTTH059... 43 0.009 BT048669_1(BT048669|pid:none) Salmo salar clone ssal-evd-554-047... 43 0.009 (Q9WTV7) RecName: Full=E3 ubiquitin-protein ligase RNF12; ... 43 0.011 (Q80U04) RecName: Full=E3 ubiquitin-protein ligase Praja2; ... 43 0.011 AK122282_1(AK122282|pid:none) Mus musculus mRNA for mKIAA0438 pr... 43 0.011 AM485058_5(AM485058|pid:none) Vitis vinifera contig VV78X234046.... 43 0.011 AF385699_1(AF385699|pid:none) Arabidopsis thaliana AT3g15070/K15... 43 0.011 BT036735_1(BT036735|pid:none) Zea mays full-length cDNA clone ZM... 43 0.011 EU960987_1(EU960987|pid:none) Zea mays clone 230224 RHC1A mRNA, ... 43 0.011 EU959798_1(EU959798|pid:none) Zea mays clone 220058 RHC1A mRNA, ... 43 0.011 AK072211_1(AK072211|pid:none) Oryza sativa Japonica Group cDNA c... 43 0.011 CR749579_1(CR749579|pid:none) Homo sapiens mRNA; cDNA DKFZp779F2... 43 0.011 CT737139_3(CT737139|pid:none) Zebrafish DNA sequence from clone ... 43 0.011 AL031635_12(AL031635|pid:none) Caenorhabditis elegans YAC Y47D3B... 43 0.011 AM270133_53(AM270133|pid:none) Aspergillus niger contig An07c016... 43 0.011 FN392322_444(FN392322|pid:none) Pichia pastoris GS115 chromosome... 43 0.011 BC150108_1(BC150108|pid:none) Bos taurus praja ring finger 2, mR... 43 0.011 CR860713_1(CR860713|pid:none) Pongo abelii mRNA; cDNA DKFZp459D0... 43 0.011 (Q63364) RecName: Full=E3 ubiquitin-protein ligase Praja2; ... 43 0.011 AP000370_21(AP000370|pid:none) Arabidopsis thaliana genomic DNA,... 43 0.011 BC056113_1(BC056113|pid:none) Xenopus laevis hypothetical protei... 43 0.011 AK103314_1(AK103314|pid:none) Oryza sativa Japonica Group cDNA c... 43 0.011 CP000591_37(CP000591|pid:none) Ostreococcus lucimarinus CCE9901 ... 43 0.011 AK061459_1(AK061459|pid:none) Oryza sativa Japonica Group cDNA c... 43 0.011 BT015124_1(BT015124|pid:none) Arabidopsis thaliana At1g51930 mRN... 43 0.011 AM462788_3(AM462788|pid:none) Vitis vinifera contig VV78X037236.... 43 0.011 BC030826_1(BC030826|pid:none) Homo sapiens praja ring finger 2, ... 43 0.011 BT034350_1(BT034350|pid:none) Zea mays full-length cDNA clone ZM... 43 0.011 AB025631_20(AB025631|pid:none) Arabidopsis thaliana genomic DNA,... 42 0.015 FB817268_1(FB817268|pid:none) Sequence 36541 from Patent WO20080... 42 0.015 AK118283_1(AK118283|pid:none) Arabidopsis thaliana At3g19950 mRN... 42 0.015 AY095995_1(AY095995|pid:none) Arabidopsis thaliana AT3g19950/MPN... 42 0.015 CT025878_1(CT025878|pid:none) Zebrafish DNA sequence from clone ... 42 0.015 AJ720228_1(AJ720228|pid:none) Gallus gallus mRNA for hypothetica... 42 0.015 (Q9QYK7) RecName: Full=RING finger protein 11; AltName: Full=NED... 42 0.015 BC043736_1(BC043736|pid:none) Xenopus laevis ring finger protein... 42 0.015 EF148378_1(EF148378|pid:none) Populus trichocarpa x Populus delt... 42 0.015 AP004687_9(AP004687|pid:none) Oryza sativa Japonica Group genomi... 42 0.015 BC170899_1(BC170899|pid:none) Xenopus tropicalis ring finger pro... 42 0.015 DQ487553_1(DQ487553|pid:none) Arabidopsis thaliana clone 0000003... 42 0.015 BT010696_1(BT010696|pid:none) Arabidopsis thaliana At1g68180 mRN... 42 0.015 BT074923_1(BT074923|pid:none) Osmerus mordax clone omor-rgc-505-... 42 0.015 (Q08DI6) RecName: Full=RING finger protein 11; &(Q9Y3C5) RecNam... 42 0.015 AF220206_1(AF220206|pid:none) Mus musculus Nedd4 WW domain-bindi... 42 0.015 EF147124_1(EF147124|pid:none) Populus trichocarpa clone WS01227_... 42 0.015 (Q93Z92) RecName: Full=E3 ubiquitin-protein ligase At4g11680; ... 42 0.015 BT035414_1(BT035414|pid:none) Zea mays full-length cDNA clone ZM... 42 0.015 AK071673_1(AK071673|pid:none) Oryza sativa Japonica Group cDNA c... 42 0.015 AM447686_2(AM447686|pid:none) Vitis vinifera contig VV78X003621.... 42 0.019 BT001518_1(BT001518|pid:none) Drosophila melanogaster LP11469 fu... 42 0.019 AK065626_1(AK065626|pid:none) Oryza sativa Japonica Group cDNA c... 42 0.019 AM502233_138(AM502233|pid:none) Leishmania infantum chromosome 15. 42 0.019 BT064886_1(BT064886|pid:none) Zea mays full-length cDNA clone ZM... 42 0.019 CT005254_147(CT005254|pid:none) Leishmania major strain Friedlin... 42 0.019 EU962263_1(EU962263|pid:none) Zea mays clone 241385 protein bind... 42 0.019 (Q9VE61) RecName: Full=RING finger protein 181 homolog; &AE0142... 42 0.019 AC144431_1(AC144431|pid:none) Medicago truncatula clone mth2-21i... 42 0.019 AC007576_29(AC007576|pid:none) Arabidopsis thaliana chromosome I... 42 0.019 BT033685_1(BT033685|pid:none) Zea mays full-length cDNA clone ZM... 42 0.019 AP003450_26(AP003450|pid:none) Oryza sativa Japonica Group genom... 42 0.019 DQ465380_1(DQ465380|pid:none) Oreochromis mossambicus clone SSH ... 42 0.019 AM461071_3(AM461071|pid:none) Vitis vinifera contig VV78X064470.... 42 0.019 AK293047_1(AK293047|pid:none) Homo sapiens cDNA FLJ77817 complet... 42 0.019 AF386995_1(AF386995|pid:none) Arabidopsis thaliana putative prot... 42 0.019 AB018422_1(AB018422|pid:none) Pisum sativum mRNA for DNA binding... 42 0.019 AB006707_5(AB006707|pid:none) Arabidopsis thaliana genomic DNA, ... 42 0.025 AY086602_1(AY086602|pid:none) Arabidopsis thaliana clone 261272 ... 42 0.025 (Q07G42) RecName: Full=E3 ubiquitin-protein ligase rnf12; ... 42 0.025 AL590447_33(AL590447|pid:none) chromosome VII of strain GB-M1 of... 42 0.025 AM441534_3(AM441534|pid:none) Vitis vinifera contig VV78X035471.... 42 0.025 AK120485_1(AK120485|pid:none) Oryza sativa Japonica Group cDNA c... 42 0.025 BT061354_1(BT061354|pid:none) Zea mays full-length cDNA clone ZM... 42 0.025 AK229265_1(AK229265|pid:none) Arabidopsis thaliana mRNA for hypo... 42 0.025 BC097491_1(BC097491|pid:none) Rattus norvegicus ring finger prot... 42 0.025 DQ336954_11(DQ336954|pid:none) Glycine max cultivar Williams 82 ... 42 0.025 AB168660_1(AB168660|pid:none) Macaca fascicularis testis cDNA cl... 42 0.025 AJ271670_1(AJ271670|pid:none) Homo sapiens Rnf12 gene for RING z... 42 0.025 BT041411_1(BT041411|pid:none) Zea mays full-length cDNA clone ZM... 42 0.025 AC134045_28(AC134045|pid:none) Oryza sativa (japonica cultivar-g... 42 0.025 AC006607_11(AC006607|pid:none) Caenorhabditis elegans cosmid C09... 42 0.025 AY048293_1(AY048293|pid:none) Arabidopsis thaliana AT5g41350/MYC... 42 0.025 AP006149_38(AP006149|pid:none) Oryza sativa Japonica Group genom... 42 0.025 AK001334_1(AK001334|pid:none) Homo sapiens cDNA FLJ10472 fis, cl... 42 0.025 DQ652687_1(DQ652687|pid:none) Arabidopsis thaliana clone 0000014... 42 0.025 DQ487563_1(DQ487563|pid:none) Arabidopsis thaliana clone 0000014... 42 0.025 AF155109_1(AF155109|pid:none) Homo sapiens putative ring zinc fi... 42 0.025 BT065564_1(BT065564|pid:none) Zea mays full-length cDNA clone ZM... 42 0.025 AB009049_7(AB009049|pid:none) Arabidopsis thaliana genomic DNA, ... 42 0.025 AB017069_6(AB017069|pid:none) Arabidopsis thaliana genomic DNA, ... 42 0.025 AC145165_9(AC145165|pid:none) Medicago truncatula clone mth2-4j2... 42 0.025 AK229330_1(AK229330|pid:none) Arabidopsis thaliana mRNA for hypo... 42 0.025 AF428290_1(AF428290|pid:none) Arabidopsis thaliana At1g17970/F2H... 42 0.025 AC145165_11(AC145165|pid:none) Medicago truncatula clone mth2-4j... 42 0.025 EU959102_1(EU959102|pid:none) Zea mays clone 210425 protein bind... 42 0.025 EU964568_1(EU964568|pid:none) Zea mays clone 280056 protein bind... 41 0.033 (Q7T037) RecName: Full=E3 ubiquitin-protein ligase rnf12-B; ... 41 0.033 AK101391_1(AK101391|pid:none) Oryza sativa Japonica Group cDNA c... 41 0.033 AK108026_1(AK108026|pid:none) Oryza sativa Japonica Group cDNA c... 41 0.033 AB114041_1(AB114041|pid:none) Xenopus laevis XRnf12C mRNA for XR... 41 0.033 AB026654_15(AB026654|pid:none) Arabidopsis thaliana genomic DNA,... 41 0.033 JC1495(JC1495) regulatory protein G1 - fruit fly (Drosophila mel... 41 0.033 AC008263_27(AC008263|pid:none) Arabidopsis thaliana chromosome 1... 41 0.033 AP004880_11(AP004880|pid:none) Oryza sativa Japonica Group genom... 41 0.033 AK226665_1(AK226665|pid:none) Arabidopsis thaliana mRNA for hypo... 41 0.033 AP008208_2471(AP008208|pid:none) Oryza sativa (japonica cultivar... 41 0.033 CR925810_3(CR925810|pid:none) Zebrafish DNA sequence from clone ... 41 0.033 AC183495_11(AC183495|pid:none) Brassica oleracea Contig A, compl... 41 0.033 CU041374_17(CU041374|pid:none) Zebrafish DNA sequence from clone... 41 0.033 AM473379_1(AM473379|pid:none) Vitis vinifera contig VV78X073156.... 41 0.033 CU633438_520(CU633438|pid:none) Podospora anserina genomic DNA c... 41 0.033 EU965176_1(EU965176|pid:none) Zea mays clone 284301 protein bind... 41 0.033 AJ890364_110(AJ890364|pid:none) Emiliania huxleyi virus 86 isola... 41 0.033 EU824018_1(EU824018|pid:none) Populus tremula isolate swl312-16 ... 41 0.033 BC053118_1(BC053118|pid:none) Danio rerio ring finger protein 11... 41 0.033 BC065620_1(BC065620|pid:none) Danio rerio ring finger protein 13... 41 0.033 AC090874_15(AC090874|pid:none) Oryza sativa chromosome 3 BAC OJ1... 41 0.033 AK066238_1(AK066238|pid:none) Oryza sativa Japonica Group cDNA c... 41 0.033 AE013599_4255(AE013599|pid:none) Drosophila melanogaster chromos... 41 0.033 (Q641J8) RecName: Full=E3 ubiquitin-protein ligase rnf12-A; ... 41 0.033 AC151824_8(AC151824|pid:none) Medicago truncatula clone mth2-45n... 41 0.033 EU952415_1(EU952415|pid:none) Zea mays clone 1279986 hypothetica... 41 0.043 BT037505_1(BT037505|pid:none) Zea mays full-length cDNA clone ZM... 41 0.043 AC087182_2(AC087182|pid:none) Oryza sativa chromosome 10 BAC OSJ... 41 0.043 BT037294_1(BT037294|pid:none) Zea mays full-length cDNA clone ZM... 41 0.043 BC168458_1(BC168458|pid:none) Xenopus tropicalis cDNA clone MGC:... 41 0.043 EU973922_1(EU973922|pid:none) Zea mays clone 424283 protein bind... 41 0.043 AY084480_1(AY084480|pid:none) Arabidopsis thaliana clone 109181 ... 41 0.043 G84555(G84555)hypothetical protein At2g17730 [imported] - Arabid... 41 0.043 EU961155_1(EU961155|pid:none) Zea mays clone 232985 protein bind... 41 0.043 AP008216_900(AP008216|pid:none) Oryza sativa (japonica cultivar-... 41 0.043 BC098405_1(BC098405|pid:none) Homo sapiens zinc finger and AT ho... 41 0.043 BT066034_1(BT066034|pid:none) Zea mays full-length cDNA clone ZM... 41 0.043 EU971772_1(EU971772|pid:none) Zea mays clone 370380 unknown mRNA. 41 0.043 (Q66HG0) RecName: Full=RING finger protein 13; &BC081881_1(BC08... 41 0.043 AK167278_1(AK167278|pid:none) Mus musculus blastocyst blastocyst... 41 0.043 (Q9FGJ6) RecName: Full=RING-H2 finger protein ATL5M; Flags: Prec... 41 0.043 AK158046_1(AK158046|pid:none) Mus musculus adult inner ear cDNA,... 41 0.043 BC088816_1(BC088816|pid:none) Xenopus tropicalis ring finger and... 41 0.043 EU960124_1(EU960124|pid:none) Zea mays clone 222001 RING finger ... 41 0.043 BT036238_1(BT036238|pid:none) Zea mays full-length cDNA clone ZM... 41 0.043 BT037285_1(BT037285|pid:none) Zea mays full-length cDNA clone ZM... 40 0.056 BC025423_1(BC025423|pid:none) Homo sapiens zinc finger and AT ho... 40 0.056 FB817232_1(FB817232|pid:none) Sequence 36505 from Patent WO20080... 40 0.056 AC135594_35(AC135594|pid:none) Oryza sativa chromosome 3 BAC OSJ... 40 0.056 AM270371_28(AM270371|pid:none) Aspergillus niger contig An16c019... 40 0.056 AK300133_1(AK300133|pid:none) Homo sapiens cDNA FLJ50665 complet... 40 0.056 AB167738_1(AB167738|pid:none) Homo sapiens ZFAT-1 mRNA, complete... 40 0.056 EU967215_1(EU967215|pid:none) Zea mays clone 300387 hypothetical... 40 0.056 AK103147_1(AK103147|pid:none) Oryza sativa Japonica Group cDNA c... 40 0.056 AM464982_3(AM464982|pid:none) Vitis vinifera contig VV78X061842.... 40 0.056 EU964448_1(EU964448|pid:none) Zea mays clone 278950 nucleic acid... 40 0.056 BT045963_1(BT045963|pid:none) Salmo salar clone ssal-rgf-537-317... 40 0.056 (Q08CG8) RecName: Full=RING finger protein 44; &BC124246_1(BC12... 40 0.056 BC143519_1(BC143519|pid:none) Homo sapiens zinc finger and AT ho... 40 0.056 AM469305_6(AM469305|pid:none) Vitis vinifera contig VV78X267210.... 40 0.056 BT060728_1(BT060728|pid:none) Zea mays full-length cDNA clone ZM... 40 0.056 AM920437_1943(AM920437|pid:none) Penicillium chrysogenum Wiscons... 40 0.056 BT061149_1(BT061149|pid:none) Zea mays full-length cDNA clone ZM... 40 0.056 AK023579_1(AK023579|pid:none) Homo sapiens cDNA FLJ13517 fis, cl... 40 0.056 AK300324_1(AK300324|pid:none) Homo sapiens cDNA FLJ53576 complet... 40 0.056 AL137898_8(AL137898|pid:none) Arabidopsis thaliana DNA chromosom... 40 0.056 AP007171_583(AP007171|pid:none) Aspergillus oryzae RIB40 genomic... 40 0.056 AY059830_1(AY059830|pid:none) Arabidopsis thaliana putative prot... 40 0.056 CT005272_303(CT005272|pid:none) Leishmania major strain Friedlin... 40 0.056 AB040918_1(AB040918|pid:none) Homo sapiens mRNA for KIAA1485 pro... 40 0.056 CP000584_405(CP000584|pid:none) Ostreococcus lucimarinus CCE9901... 40 0.056 AX250469_1(AX250469|pid:none) Sequence 75 from Patent WO0168863. 40 0.056 EU952645_1(EU952645|pid:none) Zea mays clone 1285281 protein bin... 40 0.056 EU966425_1(EU966425|pid:none) Zea mays clone 294406 protein bind... 40 0.056 AE017345_324(AE017345|pid:none) Cryptococcus neoformans var. neo... 40 0.073 AC140026_28(AC140026|pid:none) Medicago truncatula clone mth2-36... 40 0.073 AK118593_1(AK118593|pid:none) Arabidopsis thaliana At2g17730 mRN... 40 0.073 FN357535_20(FN357535|pid:none) Schistosoma mansoni genome sequen... 40 0.073 AE013599_2806(AE013599|pid:none) Drosophila melanogaster chromos... 40 0.073 AM430024_5(AM430024|pid:none) Vitis vinifera contig VV78X191346.... 40 0.073 EU952879_1(EU952879|pid:none) Zea mays clone 1292250 hypothetica... 40 0.073 BC063734_1(BC063734|pid:none) Xenopus laevis hypothetical protei... 40 0.073 BC068671_1(BC068671|pid:none) Xenopus laevis hypothetical protei... 40 0.073 BC076794_1(BC076794|pid:none) Xenopus laevis DNA polymerase kapp... 40 0.073 AC144431_2(AC144431|pid:none) Medicago truncatula clone mth2-21i... 40 0.073 AC105773_4(AC105773|pid:none) Oryza sativa (japonica cultivar-gr... 40 0.073 AE014297_876(AE014297|pid:none) Drosophila melanogaster chromoso... 40 0.073 EU351836_1(EU351836|pid:none) Arabidopsis thaliana ecotype El-0 ... 40 0.073 BT035443_1(BT035443|pid:none) Zea mays full-length cDNA clone ZM... 40 0.073 FN357583_23(FN357583|pid:none) Schistosoma mansoni genome sequen... 40 0.073 AP003491_9(AP003491|pid:none) Oryza sativa Japonica Group genomi... 40 0.073 EF087301_1(EF087301|pid:none) Picea sitchensis clone WS02742_I12... 40 0.073 AJ867480_1(AJ867480|pid:none) Zinnia elegans rh2.1 gene for RING... 40 0.073 FN357535_18(FN357535|pid:none) Schistosoma mansoni genome sequen... 40 0.073 U22375_2(U22375|pid:none) Feldmannia sp. virus Orf1, Orf2, and O... 40 0.073 (Q8W571) RecName: Full=RING-H2 finger protein ATL4O; Flags: Prec... 40 0.073 (Q8GT74) RecName: Full=RING-H2 finger protein ATL2B; AltName: Fu... 40 0.073 AM910992_26(AM910992|pid:none) Plasmodium knowlesi strain H chro... 40 0.073 BT036827_1(BT036827|pid:none) Zea mays full-length cDNA clone ZM... 40 0.096 CR382132_125(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 40 0.096 AC149050_8(AC149050|pid:none) Medicago truncatula chromosome 7 B... 40 0.096 AK105338_1(AK105338|pid:none) Oryza sativa Japonica Group cDNA c... 40 0.096 (Q9FHG8) RecName: Full=Putative RING-H2 finger protein ATL5N; &... 40 0.096 AK068302_1(AK068302|pid:none) Oryza sativa Japonica Group cDNA c... 40 0.096 AL161533_31(AL161533|pid:none) Arabidopsis thaliana DNA chromoso... 40 0.096 EF148380_1(EF148380|pid:none) Populus trichocarpa x Populus delt... 40 0.096 BT034938_1(BT034938|pid:none) Zea mays full-length cDNA clone ZM... 40 0.096 AC011765_28(AC011765|pid:none) Arabidopsis thaliana chromosome 1... 40 0.096 AY054498_1(AY054498|pid:none) Arabidopsis thaliana Unknown prote... 40 0.096 AP002066_3(AP002066|pid:none) Arabidopsis thaliana genomic DNA, ... 40 0.096 DQ885600_1(DQ885600|pid:none) Bubalus bubalis ring finger protei... 40 0.096 (Q8NC42) RecName: Full=E3 ubiquitin-protein ligase RNF149; ... 40 0.096 (Q0VD51) RecName: Full=RING finger protein 13; &BC119833_1(BC11... 40 0.096 BT036088_1(BT036088|pid:none) Zea mays full-length cDNA clone ZM... 40 0.096 EU953133_1(EU953133|pid:none) Zea mays clone 1385620 protein bin... 40 0.096 CP001328_278(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 40 0.096 AY813963_1(AY813963|pid:none) Schistosoma japonicum SJCHGC06094 ... 40 0.096 BT035302_1(BT035302|pid:none) Zea mays full-length cDNA clone ZM... 40 0.096 BT068198_1(BT068198|pid:none) Zea mays full-length cDNA clone ZM... 40 0.096 BC017878_1(BC017878|pid:none) Homo sapiens ring finger protein 1... 40 0.096 BX538350_71(BX538350|pid:none) Cryptosporidium parvum chromosome... 40 0.096 AY735516_1(AY735516|pid:none) Arabidopsis thaliana hypothetical ... 40 0.096 AK090771_1(AK090771|pid:none) Homo sapiens cDNA FLJ33452 fis, cl... 40 0.096 DQ059122_1(DQ059122|pid:none) Arabidopsis thaliana RING finger f... 40 0.096 BT042477_1(BT042477|pid:none) Zea mays full-length cDNA clone ZM... 40 0.096 AB463234_1(AB463234|pid:none) Synthetic construct DNA, clone: pF... 40 0.096 AP003104_9(AP003104|pid:none) Oryza sativa Japonica Group genomi... 40 0.096 AJ720511_1(AJ720511|pid:none) Gallus gallus mRNA for hypothetica... 40 0.096 (O43567) RecName: Full=RING finger protein 13; &(Q5RCV8) RecNam... 40 0.096 EU965072_1(EU965072|pid:none) Zea mays clone 283598 RING-H2 fing... 40 0.096 AK068144_1(AK068144|pid:none) Oryza sativa Japonica Group cDNA c... 40 0.096 AL161538_17(AL161538|pid:none) Arabidopsis thaliana DNA chromoso... 40 0.096 BT059560_1(BT059560|pid:none) Salmo salar clone ssal-rgf-532-263... 40 0.096 BT033340_1(BT033340|pid:none) Zea mays full-length cDNA clone ZM... 40 0.096 FB746686_1(FB746686|pid:none) Sequence 153 from Patent EP1903111. 40 0.096 AL080318_3(AL080318|pid:none) Arabidopsis thaliana DNA chromosom... 40 0.096 BT054768_1(BT054768|pid:none) Zea mays full-length cDNA clone ZM... 40 0.096 (Q90972) RecName: Full=RING finger protein 13; AltName: Full=C-R... 40 0.096 AP000836_16(AP000836|pid:none) Oryza sativa Japonica Group genom... 40 0.096 AP005511_7(AP005511|pid:none) Oryza sativa Japonica Group genomi... 40 0.096 BC159083_1(BC159083|pid:none) Xenopus tropicalis hypothetical pr... 39 0.13 AP004777_17(AP004777|pid:none) Oryza sativa Japonica Group genom... 39 0.13 EU967964_1(EU967964|pid:none) Zea mays clone 311994 unknown mRNA. 39 0.13 AY168924_1(AY168924|pid:none) Arabidopsis thaliana RES protein (... 39 0.13 AK096397_1(AK096397|pid:none) Homo sapiens cDNA FLJ39078 fis, cl... 39 0.13 AC131248_21(AC131248|pid:none) Medicago truncatula clone mth2-28... 39 0.13 AK099917_1(AK099917|pid:none) Oryza sativa Japonica Group cDNA c... 39 0.13 AC148486_14(AC148486|pid:none) Medicago truncatula clone mth2-56... 39 0.13 AP008207_2104(AP008207|pid:none) Oryza sativa (japonica cultivar... 39 0.13 AL844504_293(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.13 (Q9ULT6) RecName: Full=Zinc/RING finger protein 3; AltName: Full... 39 0.13 AJ564266_1(AJ564266|pid:none) Yarrowia lipolytica hrd1 gene. 39 0.13 BC087449_1(BC087449|pid:none) Xenopus laevis KF-1b, mRNA (cDNA c... 39 0.13 CP001329_520(CP001329|pid:none) Micromonas sp. RCC299 chromosome... 39 0.13 AC008007_10(AC008007|pid:none) Genomic sequence for Arabidopsis ... 39 0.13 FN357418_27(FN357418|pid:none) Schistosoma mansoni genome sequen... 39 0.13 BT071472_1(BT071472|pid:none) Picea sitchensis clone WS02915_D15... 39 0.13 BT020580_1(BT020580|pid:none) Arabidopsis thaliana At1g53190 gen... 39 0.13 FN357418_28(FN357418|pid:none) Schistosoma mansoni genome sequen... 39 0.13 EF145460_1(EF145460|pid:none) Populus trichocarpa clone WS01125_... 39 0.13 AB017069_2(AB017069|pid:none) Arabidopsis thaliana genomic DNA, ... 39 0.13 AK229146_1(AK229146|pid:none) Arabidopsis thaliana mRNA for hypo... 39 0.13 AB051436_1(AB051436|pid:none) Homo sapiens mRNA for KIAA1133 pro... 39 0.13 AB384120_1(AB384120|pid:none) Synthetic construct DNA, clone: pF... 39 0.13 AP005511_6(AP005511|pid:none) Oryza sativa Japonica Group genomi... 39 0.13 EU957647_1(EU957647|pid:none) Zea mays clone 1600948 C-terminal ... 39 0.13 FN313965_1(FN313965|pid:none) Schistosoma japonicum isolate Anhu... 39 0.16 AM502235_4(AM502235|pid:none) Leishmania infantum chromosome 17. 39 0.16 AL049638_22(AL049638|pid:none) Arabidopsis thaliana DNA chromoso... 39 0.16 AC126787_18(AC126787|pid:none) Medicago truncatula clone mth2-11... 39 0.16 AM435616_1(AM435616|pid:none) Vitis vinifera contig VV78X043637.... 39 0.16 AB168227_1(AB168227|pid:none) Macaca fascicularis testis cDNA cl... 39 0.16 T49859(T49859)hypothetical protein B24P11.150 [imported] - Neuro... 39 0.16 EU976563_1(EU976563|pid:none) Zea mays clone 983610 RING-H2 fing... 39 0.16 AK133342_1(AK133342|pid:none) Mus musculus adult male testis cDN... 39 0.16 AK073650_1(AK073650|pid:none) Oryza sativa Japonica Group cDNA c... 39 0.16 (Q9FKX5) RecName: Full=RING-H2 finger protein ATL5P; &AB011474_... 39 0.16 BT053787_1(BT053787|pid:none) Zea mays full-length cDNA clone ZM... 39 0.16 AK069011_1(AK069011|pid:none) Oryza sativa Japonica Group cDNA c... 39 0.16 BT059506_1(BT059506|pid:none) Salmo salar clone ssal-rgf-518-310... 39 0.16 FB817274_1(FB817274|pid:none) Sequence 36547 from Patent WO20080... 39 0.16 AC024812_2(AC024812|pid:none) Caenorhabditis elegans cosmid Y54E... 39 0.16 AK314180_1(AK314180|pid:none) Homo sapiens cDNA, FLJ94902, highl... 39 0.16 BT056206_1(BT056206|pid:none) Zea mays full-length cDNA clone ZM... 39 0.16 BT062519_1(BT062519|pid:none) Zea mays full-length cDNA clone ZM... 39 0.16 CR382131_1286(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 39 0.16 CR380948_212(CR380948|pid:none) Candida glabrata strain CBS138 c... 39 0.16 AC183494_3(AC183494|pid:none) Brassica oleracea Contig C, comple... 39 0.16 (Q5SSZ7) RecName: Full=Zinc/RING finger protein 3; Flags: Precur... 39 0.16 DQ812520_2(DQ812520|pid:none) Spironucleus barkhanus isolate Sp3... 39 0.16 (O00237) RecName: Full=RING finger protein 103; AltName: Full=Zi... 39 0.16 AY813144_1(AY813144|pid:none) Schistosoma japonicum SJCHGC05585 ... 39 0.16 BC151080_1(BC151080|pid:none) Mus musculus zinc and ring finger ... 39 0.16 AB020742_8(AB020742|pid:none) Arabidopsis thaliana genomic DNA, ... 39 0.16 AP003760_20(AP003760|pid:none) Oryza sativa Japonica Group genom... 39 0.16 A86323(A86323) protein F14D16.3 [imported] - Arabidopsis thalian... 39 0.16 EU968128_1(EU968128|pid:none) Zea mays clone 314895 RING-H2 fing... 39 0.21 EU965227_1(EU965227|pid:none) Zea mays clone 284641 hypothetical... 39 0.21 AC129090_8(AC129090|pid:none) Medicago truncatula clone mth2-14i... 39 0.21 AM494954_4(AM494954|pid:none) Leishmania braziliensis chromosome... 39 0.21 (Q3U2C5) RecName: Full=E3 ubiquitin-protein ligase RNF149; ... 39 0.21 AC079022_20(AC079022|pid:none) Oryza sativa chromosome 5 clone P... 39 0.21 AL663003_5(AL663003|pid:none) Oryza sativa genomic DNA, chromoso... 39 0.21 BT042710_1(BT042710|pid:none) Zea mays full-length cDNA clone ZM... 39 0.21 AP008211_65(AP008211|pid:none) Oryza sativa (japonica cultivar-g... 39 0.21 EF677666_1(EF677666|pid:none) Picea sitchensis clone WS02772_L03... 39 0.21 EU966227_1(EU966227|pid:none) Zea mays clone 292713 RING-H2 fing... 39 0.21 AY057571_1(AY057571|pid:none) Arabidopsis thaliana AT4g23450/F16... 39 0.21 AC079356_2(AC079356|pid:none) Oryza sativa (japonica cultivar-gr... 39 0.21 AY035147_1(AY035147|pid:none) Arabidopsis thaliana unknown prote... 39 0.21 AC005724_5(AC005724|pid:none) Arabidopsis thaliana chromosome 2 ... 39 0.21 AY084564_1(AY084564|pid:none) Arabidopsis thaliana clone 112003 ... 39 0.21 AE014298_2901(AE014298|pid:none) Drosophila melanogaster chromos... 39 0.21 FN313814_1(FN313814|pid:none) Schistosoma japonicum isolate Anhu... 39 0.21 AK029824_1(AK029824|pid:none) Mus musculus adult male testis cDN... 39 0.21 EF134067_1(EF134067|pid:none) Perkinsus marinus isolate Pma_cDNA... 39 0.21 (Q6NQG7) RecName: Full=RING-H2 finger protein ATL1L; &AK176235_... 39 0.21 AL031326_15(AL031326|pid:none) Arabidopsis thaliana DNA chromoso... 39 0.21 AY069600_1(AY069600|pid:none) Drosophila melanogaster LD35343 fu... 39 0.21 (A8Y4B2) RecName: Full=E3 ubiquitin-protein ligase hrd-1; AltNam... 39 0.21 FM992689_610(FM992689|pid:none) Candida dubliniensis CD36 chromo... 39 0.21
>(Q08CN9) RecName: Full=E3 ubiquitin-protein ligase ZNRF2; EC=6.3.2.-; AltName: Full=Zinc/RING finger protein 2; &BC124159_1(BC124159|pid:none) Length = 217
Score = 64.3 bits (155), Expect = 4e-09 Identities = 33/88 (37%), Positives = 46/88 (52%) Frame = +3
Query: 435 YKCPLCNEKSPNLISHLSKTHIRVQQKQVGVGYSTSVLENDLSEDIECPICLEEFTKGQN 614 +KCP+C S + S H+ + + V Y+ VL D E C ICLEE +G Sbjct: 133 FKCPVC---SKFISSDEMDLHLVMCLTKPRVTYNEDVLSKDAGE---CAICLEELLQGDT 186
Query: 615 VARLECWCIFHTNCISEYLLKSKKCPVH 698 +ARL C CI+H CI E+ ++ CP H Sbjct: 187 IARLPCLCIYHKGCIDEWFEVNRSCPEH 214
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3204285 Number of Hits to DB: 1,044,141,979 Number of extensions: 20193009 Number of successful extensions: 54588 Number of sequences better than 10.0: 1165 Number of HSP's gapped: 54282 Number of HSP's successfully gapped: 1183 Length of query: 243 Length of database: 1,040,966,779 Length adjustment: 125 Effective length of query: 118 Effective length of database: 640,431,154 Effective search space: 75570876172 Effective search space used: 75570876172 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 31 (16.5 bits)
|
PSORT |
|
VS (DIR, S) |
1 |
VH (FL, L) |
0 |
VF (FL, S) |
0 |
AH (FL, L) |
0 |
AF (FL, S) |
0 |
SL (DIR, L) |
0 |
SS (DIR, S) |
0 |
SH (FL, L) |
0 |
SF (FL, S) |
0 |
CH (FL, L) |
0 |
CF (FL, S) |
0 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
0 |
FC-IC (SUB) |
0 |