| Contig-U09782-1 |
| Contig ID |
Contig-U09782-1 |
| Contig update |
2002. 9.13 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1312 |
| Chromosome number (1..6, M) |
5 |
| Chromosome length |
5062330 |
| Start point |
2632280 |
| End point |
2633584 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
3 |
| Number of EST |
4 |
| Link to clone list |
U09782 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.17 |
| Homology vs DNA |
Query= Contig-U09782-1 (Contig-U09782-1Q) /CSM_Contig/Contig-U09782-1Q.Seq.d
(1322 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ436125) Dictyostelium discoideum cDNA clone:ddv30e06, 3' ... 565 0.0 2
(BJ434878) Dictyostelium discoideum cDNA clone:ddv25b08, 3' ... 549 0.0 4
(BJ434401) Dictyostelium discoideum cDNA clone:ddv16c19, 3' ... 557 0.0 3
(BJ417268) Dictyostelium discoideum cDNA clone:ddv30e06, 5' ... 771 0.0 2
(AL445563) Mycoplasma pulmonis (strain UAB CTIP) complete ge... 32 0.021 15
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 34 0.024 18
(AC115604) Dictyostelium discoideum chromosome 2 map 4354771... 34 0.12 8
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 36 0.14 14
(FG080515) UI-FF-IH0-aay-a-15-0-UI.r1 Ceratitis capitata adu... 34 0.17 2
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 34 0.18 15
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 32 0.19 15
(CT030030) Mouse DNA sequence from clone RP23-123J19 on chro... 50 0.22 1
(AC161247) Mus musculus BAC clone RP24-447J22 from chromosom... 50 0.22 1
(AC212965) Nomascus leucogenys leucogenys clone CH271-141A10... 50 0.22 1
(EJ427791) 1093015235895 Global-Ocean-Sampling_GS-28-01-01-1... 50 0.22 1
(DJ386567) Diagnosis of Diseases Associated with Metastasis. 34 0.26 4
(BD452584) Diagnosis of Diseases Associated with tumor suppr... 34 0.26 4
(AX348581) Sequence 39 from Patent WO0202807. 34 0.26 4
(AX345262) Sequence 333 from Patent WO0200928. 34 0.26 4
(AX281363) Sequence 27 from Patent WO0177376. 34 0.26 4
(AX251063) Sequence 31 from Patent WO0168912. 34 0.26 4
(AZ695134) RPCI-23-240C18.TV RPCI-23 Mus musculus genomic cl... 36 0.37 2
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 36 0.42 20
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 36 0.47 10
(X70810) Euglena gracilis chloroplast complete genome. 34 0.48 8
(AY159036) Dictyostelium discoideum LvsE (lvsE) gene, partia... 36 0.52 5
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 38 0.56 20
(EK144557) 1095456012805 Global-Ocean-Sampling_GS-31-01-01-1... 42 0.58 3
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 38 0.68 10
(CP000246) Clostridium perfringens ATCC 13124, complete genome. 38 0.78 19
(BV489215) S216P61022FH4.T0 Masuku Pan troglodytes troglodyt... 48 0.86 1
(BV474604) G591P626508FB2.T0 Clint Pan troglodytes verus STS... 48 0.86 1
(BV474312) G591P626471FG7.T0 Clint Pan troglodytes verus STS... 48 0.86 1
(BV469334) G591P607253FA11.T0 Clint Pan troglodytes verus ST... 48 0.86 1
(AC161015) Pan troglodytes BAC clone CH251-489I22 from chrom... 48 0.86 1
(AF106580) Caenorhabditis elegans cosmid F58B6, complete seq... 48 0.86 1
(AL023575) Human DNA sequence from clone RP5-931E15 on chrom... 48 0.86 1
(Z82207) Human DNA sequence *** SEQUENCING CANCELLED *** fro... 48 0.86 1
(AC198520) Pongo abelii chromosome UNKNOWN clone CH276-398M9... 48 0.86 1
(ET861121) CHO_OF165xd12f1.ab1 CHO_OF Nicotiana tabacum geno... 48 0.86 1
(ET861116) CHO_OF165xb10f1.ab1 CHO_OF Nicotiana tabacum geno... 48 0.86 1
(AQ107437) HS_3110_B2_G10_T7 CIT Approved Human Genomic Sper... 48 0.86 1
(EJ380005) 1092963757968 Global-Ocean-Sampling_GS-28-01-01-1... 48 0.86 1
(AG173742) Pan troglodytes DNA, clone: RP43-043M17.TJ. 48 0.86 1
(DU964122) 236860 Tomato MboI BAC Library Solanum lycopersic... 36 0.91 3
(EJ804948) 1093017452312 Global-Ocean-Sampling_GS-30-02-01-1... 42 1.1 2
(AC174327) Medicago truncatula chromosome 8 clone mth2-108e2... 36 1.1 9
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 34 1.2 13
(AM422018) Candidatus Phytoplasma australiense complete genome. 36 1.2 16
(AC175047) Medicago truncatula chromosome 7 BAC clone mth2-6... 36 1.4 4
(CT989254) Zebrafish DNA sequence from clone DKEY-202I2 in l... 38 1.4 5
(CP000742) Methanococcus vannielii SB, complete genome. 32 1.5 2
(AC023394) Homo sapiens chromosome 18, clone RP11-389J22, co... 36 1.6 7
(AC205342) Zea mays chromosome 6 clone CH201-66J11; ZMMBBc00... 36 1.7 2
(AC206979) Zea mays chromosome 2 clone ZMMBBb-473M23; ZMMBBb... 36 1.7 2
(AC213599) Zea mays chromosome 7 clone CH201-238G1; ZMMBBc02... 36 1.7 2
(AC218953) Zea mays chromosome UNKNOWN clone ZMMBBb-358C12; ... 36 1.7 2
(AC194336) Zea mays chromosome unknown clone ZMMBBb-418B12; ... 36 1.7 2
(AC203918) Zea mays chromosome 2 clone ZMMBBb-331L10; ZMMBBb... 36 1.8 2
(AC022448) Homo sapiens chromosome 5 clone RP11-78G3, comple... 36 1.9 6
(AE017263) Mesoplasma florum L1 complete genome. 34 2.0 20
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 34 2.1 19
(AM285302) Spiroplasma citri GII3-3X chromosome, contig Cont... 36 2.2 9
(CL290887) ZMMBBb0635L07f ZMMBBb (HindIII) Zea mays subsp. m... 36 2.3 2
(CG794016) ZMMBBb0317C23.r ZMMBBb Zea mays subsp. mays genom... 36 2.3 2
(CL415128) ZMMBBb0422H10r ZMMBBb (HindIII) Zea mays subsp. m... 36 2.3 2
(AJ303199) Daucus carota sut2 gene for sucrose/proton sympor... 40 2.5 2
(DT781638) 125614870 TH1 Tribolium castaneum cDNA clone 69O3... 34 2.7 3
(DT780991) 125690652 TH1 Tribolium castaneum cDNA clone 75C1... 34 2.7 3
(CO204270) IS0014.B21.1_L12 IS-B-A-4 Picea engelmannii x Pic... 38 2.8 2
(AC164299) Mus musculus BAC clone RP23-313K8 from chromosome... 38 2.9 5
(EJ831003) 1093017581162 Global-Ocean-Sampling_GS-30-02-01-1... 34 2.9 3
(AC205926) Pongo abelii chromosome UNKNOWN clone CH276-36H14... 36 3.2 8
(AW759896) sl55e05.y1 Gm-c1027 Glycine max cDNA clone GENOME... 36 3.2 3
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 32 3.3 11
(EJ478712) 1095403457155 Global-Ocean-Sampling_GS-28-01-01-1... 38 3.4 2
(AC142095) Medicago truncatula clone mth2-14c17, complete se... 46 3.4 1
(ER597609) 1093016228537 Global-Ocean-Sampling_GS-36-01-01-2... 46 3.4 1
(ER529251) 1093015735922 Global-Ocean-Sampling_GS-35-01-01-1... 46 3.4 1
(EK120262) 1092963357344 Global-Ocean-Sampling_GS-31-01-01-1... 46 3.4 1
(EJ625672) 1092963155305 Global-Ocean-Sampling_GS-29-01-01-1... 46 3.4 1
(EJ623800) 1092963116041 Global-Ocean-Sampling_GS-29-01-01-1... 46 3.4 1
(EJ471786) 1095403414669 Global-Ocean-Sampling_GS-28-01-01-1... 46 3.4 1
(ED131985) AUAC-aaf08a01.g1 Ascaris suum whole genome shotgu... 46 3.4 1
(CJ401508) Molgula tectiformis cDNA, gonad clone:mtgd015e03,... 46 3.4 1
(CJ400851) Molgula tectiformis cDNA, gonad clone:mtgd013f23,... 46 3.4 1
(CP000393) Trichodesmium erythraeum IMS101, complete genome. 46 3.4 1
(CW044321) 104_280_10508882_115_30241 Sorghum methylation fi... 36 3.8 3
(DQ288858) Spodoptera litura granulovirus isolate SlGV-K1, c... 36 3.9 4
(AC135460) Oryza sativa Japonica Group chromosome 11 clone O... 36 4.1 6
(CW428422) fsbb001f141b22f0 Sorghum methylation filtered lib... 36 4.8 3
(AE015927) Clostridium tetani E88, complete genome. 34 5.0 19
(AM436513) Vitis vinifera contig VV78X223522.2, whole genome... 38 5.3 2
(AX349036) Sequence 494 from Patent WO0202807. 36 5.4 6
(AC167974) Mus musculus BAC clone RP23-314B11 from chromosom... 38 5.6 7
(BX649578) Zebrafish DNA sequence from clone CH211-196L7 in ... 38 5.8 7
(CU179680) Mycoplasma agalactiae PG2 chromosome, complete se... 36 6.3 19
(CL180093) 104_389_10895755_148_31907_283 Sorghum methylatio... 36 6.5 3
(L16560) Caenorhabditis elegans cosmid D2007, complete seque... 42 6.6 4
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 32 6.7 10
>(BJ436125) Dictyostelium discoideum cDNA clone:ddv30e06, 3' end,
single read.
Length = 750
Score = 565 bits (285), Expect(2) = 0.0
Identities = 285/285 (100%)
Strand = Plus / Minus
Query: 766 gaaagtgaatttaaaactaaaatcatttcaaattataataaaaagcatgaaaatgttaaa 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gaaagtgaatttaaaactaaaatcatttcaaattataataaaaagcatgaaaatgttaaa 499
Query: 826 gtttcagaagcattaaatgcatcatcggcagcaccaatttattttaaaccagtggagatt 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gtttcagaagcattaaatgcatcatcggcagcaccaatttattttaaaccagtggagatt 439
Query: 886 aatggtcacaaatatgttgatggaggtattggttatcaaaataatccaattttattggct 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aatggtcacaaatatgttgatggaggtattggttatcaaaataatccaattttattggct 379
Query: 946 cataaagaatgtttgaaattatttggtgatatgacagaatatttattcatttcattaggt 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cataaagaatgtttgaaattatttggtgatatgacagaatatttattcatttcattaggt 319
Query: 1006 actggtacttttgaagcaactagtactgtcatctctccaagtagt 1050
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 actggtacttttgaagcaactagtactgtcatctctccaagtagt 274
Score = 519 bits (262), Expect(2) = 0.0
Identities = 265/265 (100%)
Strand = Plus / Minus
Query: 1058 taatattccaagctcaagaaacctttaaaaatgctgttggtttaattaaaaatgctgctt 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 taatattccaagctcaagaaacctttaaaaatgctgttggtttaattaaaaatgctgctt 207
Query: 1118 caagtattggtgattctgaaacacctcatcaaatttttaaacaaatgtcaaattataaaa 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 caagtattggtgattctgaaacacctcatcaaatttttaaacaaatgtcaaattataaaa 147
Query: 1178 atgttagttactatcgtttcaatccaaaattaactcaaaacttttctttgtccgatacaa 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 atgttagttactatcgtttcaatccaaaattaactcaaaacttttctttgtccgatacaa 87
Query: 1238 gtaaatcaagtttagatgcaatggaaactgaagcacgacaatatatgcaatctcaagata 1297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 gtaaatcaagtttagatgcaatggaaactgaagcacgacaatatatgcaatctcaagata 27
Query: 1298 nattagagaagttcaaaatctaaaa 1322
|||||||||||||||||||||||||
Sbjct: 26 nattagagaagttcaaaatctaaaa 2
Score = 206 bits (104), Expect = 2e-48
Identities = 104/104 (100%)
Strand = Plus / Minus
Query: 574 aagtttttggtaataaccactatgggtaattttgctcaaaataaaaaattatttgttgtt 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 aagtttttggtaataaccactatgggtaattttgctcaaaataaaaaattatttgttgtt 691
Query: 634 gtttcaaaattaaaacataacaattcattattacaacaacagca 677
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gtttcaaaattaaaacataacaattcattattacaacaacagca 647
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,605,612,015
Number of extensions: 107852910
Number of successful extensions: 9220732
Number of sequences better than 10.0: 139
Length of query: 1322
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1298
Effective length of database: 97,308,875,965
Effective search space: 126306921002570
Effective search space used: 126306921002570
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.26 |
| Homology vs Protein |
Query= Contig-U09782-1 (Contig-U09782-1Q) /CSM_Contig/Contig-U09782-1Q.Seq.d
(1322 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EU419878_1(EU419878|pid:none) Gallus gallus PNPLA8 mRNA, complet... 72 3e-11
BC019364_1(BC019364|pid:none) Mus musculus patatin-like phosphol... 72 4e-11
AK004621_1(AK004621|pid:none) Mus musculus adult male lung cDNA,... 72 4e-11
AK168475_1(AK168475|pid:none) Mus musculus 17 days embryo kidney... 71 8e-11
AM482217_5(AM482217|pid:none) Vitis vinifera contig VV78X182164.... 71 1e-10
CT573075_3(CT573075|pid:none) Zebrafish DNA sequence from clone ... 69 4e-10
(Q5XTS1) RecName: Full=Calcium-independent phospholipase A2-gamm... 69 5e-10
CP000586_131(CP000586|pid:none) Ostreococcus lucimarinus CCE9901... 69 5e-10
AK002115_1(AK002115|pid:none) Homo sapiens cDNA FLJ11253 fis, cl... 68 6e-10
AC005058_1(AC005058|pid:none) Homo sapiens BAC clone CTB-54D4 fr... 68 6e-10
AK291755_1(AK291755|pid:none) Homo sapiens cDNA FLJ77572 complet... 68 6e-10
(Q9NP80) RecName: Full=Calcium-independent phospholipase A2-gamm... 68 6e-10
AK024335_1(AK024335|pid:none) Homo sapiens cDNA FLJ14273 fis, cl... 68 8e-10
AC152499_11(AC152499|pid:none) Medicago truncatula clone mth2-56... 67 1e-09
AF217519_1(AF217519|pid:none) Homo sapiens uncharacterized bone ... 67 1e-09
AC084197_19(AC084197|pid:none) Caenorhabditis elegans cosmid Y73... 66 2e-09
CP000470_209(CP000470|pid:none) Shewanella sp. ANA-3 plasmid 1, ... 65 7e-09
CP001291_4536(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 62 4e-08
CP000085_722(CP000085|pid:none) Burkholderia thailandensis E264 ... 62 5e-08
CP001295_19(CP001295|pid:none) Cyanothece sp. PCC 7424 plasmid p... 61 8e-08
CU207211_2078(CU207211|pid:none) Herminiimonas arsenicoxydans ch... 60 1e-07
CP000571_2308(CP000571|pid:none) Burkholderia pseudomallei 668 c... 60 2e-07
CP000615_1039(CP000615|pid:none) Burkholderia vietnamiensis G4 c... 59 3e-07
CP000379_965(CP000379|pid:none) Burkholderia cenocepacia AU 1054... 59 5e-07
CP000781_552(CP000781|pid:none) Xanthobacter autotrophicus Py2, ... 57 1e-06
AM999887_454(AM999887|pid:none) Wolbachia endosymbiont of Culex ... 57 1e-06
CP001325_513(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 57 2e-06
CP000875_2528(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 57 2e-06
AC006618_1(AC006618|pid:none) Caenorhabditis elegans cosmid C45B... 57 2e-06
CP000685_3223(CP000685|pid:none) Flavobacterium johnsoniae UW101... 56 3e-06
AL954747_2520(AL954747|pid:none) Nitrosomonas europaea ATCC 1971... 56 3e-06
CS163776_1(CS163776|pid:none) Sequence 7 from Patent WO200508309... 56 3e-06
CP000542_4567(CP000542|pid:none) Verminephrobacter eiseniae EF01... 56 3e-06
AM999887_271(AM999887|pid:none) Wolbachia endosymbiont of Culex ... 55 7e-06
AE017196_502(AE017196|pid:none) Wolbachia endosymbiont of Drosop... 54 1e-05
CP000393_1525(CP000393|pid:none) Trichodesmium erythraeum IMS101... 54 1e-05
AB478516_60(AB478516|pid:none) Wolbachia endosymbiont of Cadra c... 54 1e-05
CP001391_572(CP001391|pid:none) Wolbachia sp. wRi, complete geno... 53 2e-05
EF066650_25(EF066650|pid:none) Sinorhizobium meliloti strain SM1... 53 2e-05
T22327(T22327) hypothetical protein F47A4.5 - Caenorhabditis ele... 53 2e-05
CP000117_1617(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 53 3e-05
CU633750_297(CU633750|pid:none) Cupriavidus taiwanensis str. LMG... 52 4e-05
CP000874_1967(CP000874|pid:none) Rhizobium sp. NGR234 plasmid pN... 52 5e-05
CP000092_127(CP000092|pid:none) Ralstonia eutropha JMP134 megapl... 52 5e-05
CP001291_2614(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 52 6e-05
CP000384_3160(CP000384|pid:none) Mycobacterium sp. MCS, complete... 52 6e-05
CU458896_2069(CU458896|pid:none) Mycobacterium abscessus chromos... 52 6e-05
CP001102_1305(CP001102|pid:none) Candidatus Amoebophilus asiatic... 51 8e-05
CP001327_520(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 50 1e-04
AY233333_31(AY233333|pid:none) Escherichia coli strain ECOR31 hi... 50 1e-04
AM910993_130(AM910993|pid:none) Plasmodium knowlesi strain H chr... 50 1e-04
CP000469_1247(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 50 1e-04
CP001326_256(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 50 1e-04
AE016825_441(AE016825|pid:none) Chromobacterium violaceum ATCC 1... 50 1e-04
CU638743_858(CU638743|pid:none) Podospora anserina genomic DNA c... 50 2e-04
CP000700_31(CP000700|pid:none) Sphingomonas wittichii RW1 plasmi... 50 2e-04
BC077558_1(BC077558|pid:none) Xenopus laevis MGC83523 protein, m... 50 2e-04
AP003917_6(AP003917|pid:none) Oryza sativa Japonica Group genomi... 49 3e-04
BC155980_1(BC155980|pid:none) Xenopus tropicalis cDNA clone IMAG... 49 3e-04
AP007151_260(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 49 4e-04
CP000390_546(CP000390|pid:none) Mesorhizobium sp. BNC1, complete... 49 4e-04
CP001037_1989(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 49 4e-04
AB478515_66(AB478515|pid:none) Wolbachia endosymbiont of Cadra c... 49 4e-04
AE014296_1876(AE014296|pid:none) Drosophila melanogaster chromos... 49 4e-04
CP000585_207(CP000585|pid:none) Ostreococcus lucimarinus CCE9901... 48 7e-04
CP000107_182(CP000107|pid:none) Ehrlichia canis str. Jake, compl... 47 0.001
AM889285_2893(AM889285|pid:none) Gluconacetobacter diazotrophicu... 47 0.002
AM920439_312(AM920439|pid:none) Penicillium chrysogenum Wisconsi... 47 0.002
CP000030_187(CP000030|pid:none) Anaplasma marginale str. St. Mar... 46 0.003
CP001079_184(CP001079|pid:none) Anaplasma marginale str. Florida... 46 0.003
CP000884_748(CP000884|pid:none) Delftia acidovorans SPH-1, compl... 46 0.003
CP000738_1220(CP000738|pid:none) Sinorhizobium medicae WSM419, c... 46 0.003
AM920436_34(AM920436|pid:none) Penicillium chrysogenum Wisconsin... 46 0.003
AJ235272_50(AJ235272|pid:none) Rickettsia prowazekii strain Madr... 46 0.003
AE017197_501(AE017197|pid:none) Rickettsia typhi str. Wilmington... 46 0.003
AM920457_1(AM920457|pid:none) Penicillium chrysogenum Wisconsin ... 45 0.004
CP000847_867(CP000847|pid:none) Rickettsia akari str. Hartford, ... 45 0.004
CP001102_399(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 45 0.006
CU466930_967(CU466930|pid:none) Candidatus Cloacamonas acidamino... 45 0.006
AM180355_2237(AM180355|pid:none) Clostridium difficile 630 compl... 45 0.006
BC067375_1(BC067375|pid:none) Danio rerio phospholipase A2, grou... 45 0.006
BX571946_1(BX571946|pid:none) Zebrafish DNA sequence from clone ... 45 0.006
AK153333_1(AK153333|pid:none) Mus musculus bone marrow macrophag... 45 0.008
(P97819) RecName: Full=85 kDa calcium-independent phospholipase ... 45 0.008
CP000733_874(CP000733|pid:none) Coxiella burnetii Dugway 5J108-1... 45 0.008
(P97570) RecName: Full=85 kDa calcium-independent phospholipase ... 45 0.008
BC052845_1(BC052845|pid:none) Mus musculus phospholipase A2, gro... 45 0.008
T33857(T33857)hypothetical protein D1037.5 - Caenorhabditis eleg... 44 0.010
AJ617735_1(AJ617735|pid:none) Hevea brasiliensis partial mRNA fo... 44 0.013
CP001020_677(CP001020|pid:none) Coxiella burnetii CbuK_Q154, com... 44 0.013
AF113546_1(AF113546|pid:none) Hevea brasiliensis latex protein a... 44 0.013
AJ223038_1(AJ223038|pid:none) Hevea brasiliensis mRNA for latex ... 44 0.013
AM920458_1(AM920458|pid:none) Penicillium chrysogenum Wisconsin ... 44 0.013
AM920437_2668(AM920437|pid:none) Penicillium chrysogenum Wiscons... 44 0.013
AL021489_5(AL021489|pid:none) Caenorhabditis elegans YAC Y44A6C,... 44 0.017
AX876424_1(AX876424|pid:none) Sequence 11329 from Patent EP10746... 44 0.017
AK108679_1(AK108679|pid:none) Oryza sativa Japonica Group cDNA c... 44 0.017
AF102988_1(AF102988|pid:none) Homo sapiens Ca2+-independent phos... 44 0.017
CP000813_1621(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 44 0.017
AF117692_1(AF117692|pid:none) Homo sapiens calcium-independent p... 44 0.017
AL021489_4(AL021489|pid:none) Caenorhabditis elegans YAC Y44A6C,... 44 0.017
CP000139_3863(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 44 0.017
AL022322_4(AL022322|pid:none) Human DNA sequence from clone CTA-... 44 0.017
AL021489_3(AL021489|pid:none) Caenorhabditis elegans YAC Y44A6C,... 44 0.017
(O60733) RecName: Full=85 kDa calcium-independent phospholipase ... 44 0.017
T12503(T12503)hypothetical protein DKFZp434A102.1 - human (fragm... 44 0.017
CP000875_1140(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 44 0.017
AF102989_1(AF102989|pid:none) Homo sapiens Ca2+-independent phos... 44 0.017
BT060501_1(BT060501|pid:none) Zea mays full-length cDNA clone ZM... 43 0.022
EU962920_1(EU962920|pid:none) Zea mays clone 246543 patatin clas... 43 0.022
EU959038_1(EU959038|pid:none) Zea mays clone 209512 patatin T5 p... 43 0.022
BT066538_1(BT066538|pid:none) Zea mays full-length cDNA clone ZM... 43 0.022
AF158254_1(AF158254|pid:none) Nicotiana tabacum patatin-like pro... 43 0.029
AF158253_1(AF158253|pid:none) Nicotiana tabacum patatin-like pro... 42 0.038
EU973191_1(EU973191|pid:none) Zea mays clone 394708 patatin T5 p... 42 0.038
AF061282_12(AF061282|pid:none) Sorghum bicolor 22 kDa kafirin cl... 42 0.038
CP001102_1033(CP001102|pid:none) Candidatus Amoebophilus asiatic... 42 0.038
AP003962_8(AP003962|pid:none) Oryza sativa Japonica Group genomi... 42 0.038
(Q2MY54) RecName: Full=Patatin group J-1; EC=3.1.1.-; F... 42 0.049
AJ534341_1(AJ534341|pid:none) Agaricus bisporus partial mRNA for... 42 0.049
CP000644_958(CP000644|pid:none) Aeromonas salmonicida subsp. sal... 42 0.049
AM435376_1(AM435376|pid:none) Vitis vinifera contig VV78X013204.... 42 0.049
AM436318_2(AM436318|pid:none) Vitis vinifera contig VV78X058876.... 42 0.049
FM954972_1655(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 42 0.049
(Q2MY60) RecName: Full=Patatin-02; EC=3.1.1.-; AltName:... 42 0.049
AY809890_1(AY809890|pid:none) Schistosoma japonicum SJCHGC09449 ... 42 0.049
(Q41487) RecName: Full=Patatin-16; EC=3.1.1.-; Flags: P... 42 0.049
CP000746_1348(CP000746|pid:none) Actinobacillus succinogenes 130... 42 0.064
(Q2MY58) RecName: Full=Patatin group A-3; EC=3.1.1.-; F... 42 0.064
CP000053_360(CP000053|pid:none) Rickettsia felis URRWXCal2, comp... 42 0.064
AM920428_7(AM920428|pid:none) Penicillium chrysogenum Wisconsin ... 42 0.064
AP009380_1043(AP009380|pid:none) Porphyromonas gingivalis ATCC 3... 42 0.064
AE015924_782(AE015924|pid:none) Porphyromonas gingivalis W83, co... 42 0.064
EF145888_1(EF145888|pid:none) Populus trichocarpa clone WS0114_A... 41 0.084
AF061282_10(AF061282|pid:none) Sorghum bicolor 22 kDa kafirin cl... 41 0.084
(Q3YJT0) RecName: Full=Patatin-2-Kuras 4; EC=3.1.1.-; F... 41 0.084
AP006849_37(AP006849|pid:none) Oryza sativa Japonica Group genom... 41 0.084
AP008215_855(AP008215|pid:none) Oryza sativa (japonica cultivar-... 41 0.084
CS131067_1(CS131067|pid:none) Sequence 122 from Patent WO2005066... 41 0.084
CP000923_1144(CP000923|pid:none) Thermoanaerobacter sp. X514, co... 41 0.084
AP007174_307(AP007174|pid:none) Aspergillus oryzae RIB40 genomic... 41 0.084
CU633901_266(CU633901|pid:none) Podospora anserina genomic DNA c... 41 0.084
CS131065_1(CS131065|pid:none) Sequence 120 from Patent WO2005066... 41 0.084
(Q8LPW4) RecName: Full=Patatin-17; EC=3.1.1.-; Flags: P... 41 0.11
AF193067_1(AF193067|pid:none) Vigna unguiculata patatin-like pro... 41 0.11
AM452376_1(AM452376|pid:none) Vitis vinifera contig VV78X078974.... 41 0.11
AY233333_28(AY233333|pid:none) Escherichia coli strain ECOR31 hi... 41 0.11
EF085549_1(EF085549|pid:none) Picea sitchensis clone WS0276_K19 ... 41 0.11
AP008213_1137(AP008213|pid:none) Oryza sativa (japonica cultivar... 40 0.14
AF061282_14(AF061282|pid:none) Sorghum bicolor 22 kDa kafirin cl... 40 0.14
(Q2MY56) RecName: Full=Patatin group D-2; EC=3.1.1.-; F... 40 0.14
AP007161_245(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 40 0.14
CP000529_1598(CP000529|pid:none) Polaromonas naphthalenivorans C... 40 0.14
CP000804_1156(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 40 0.19
CP000159_2624(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 40 0.24
CP000325_1854(CP000325|pid:none) Mycobacterium ulcerans Agy99, c... 40 0.24
CP000717_2068(CP000717|pid:none) Mycobacterium tuberculosis F11,... 40 0.24
CP000854_2976(CP000854|pid:none) Mycobacterium marinum M, comple... 40 0.24
AX146911_1(AX146911|pid:none) Sequence 11 from Patent WO0136468. 40 0.24
T03841(T03841) patatin homolog - common tobacco &U68484_1(U6848... 40 0.24
U68483_1(U68483|pid:none) Nicotiana tabacum patatin homolog gene... 40 0.24
CP001097_387(CP001097|pid:none) Chlorobium limicola DSM 245, com... 40 0.24
EU973572_1(EU973572|pid:none) Zea mays clone 401130 unknown mRNA. 40 0.24
AP007163_14(AP007163|pid:none) Aspergillus oryzae RIB40 genomic ... 39 0.32
AL161590_32(AL161590|pid:none) Arabidopsis thaliana DNA chromoso... 39 0.32
Z68299_8(Z68299|pid:none) Caenorhabditis elegans Cosmid T04B2, c... 39 0.32
AC097279_16(AC097279|pid:none) Oryza sativa chromosome 3 BAC OSJ... 39 0.32
T24442(T24442;T26042)hypothetical protein T04B2.5 - Caenorhabdit... 39 0.32
CU638743_160(CU638743|pid:none) Podospora anserina genomic DNA c... 39 0.32
CP000687_1983(CP000687|pid:none) Actinobacillus pleuropneumoniae... 39 0.41
CP000316_3038(CP000316|pid:none) Polaromonas sp. JS666, complete... 39 0.41
CP001091_2083(CP001091|pid:none) Actinobacillus pleuropneumoniae... 39 0.41
CP000849_501(CP000849|pid:none) Rickettsia bellii OSU 85-389, co... 39 0.54
AM398681_220(AM398681|pid:none) Flavobacterium psychrophilum JIP... 39 0.54
EU481350_1(EU481350|pid:none) Caenorhabditis remanei strain PB24... 39 0.54
AJ002596_1(AJ002596|pid:none) Arabidopsis thaliana mRNA for pata... 39 0.54
CP000413_523(CP000413|pid:none) Lactobacillus gasseri ATCC 33323... 39 0.54
AM260479_2344(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 39 0.54
CP000409_355(CP000409|pid:none) Rickettsia canadensis str. McKie... 39 0.54
CP000267_353(CP000267|pid:none) Rhodoferax ferrireducens T118, c... 39 0.54
CU633749_1897(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 39 0.54
(Q2MY40) RecName: Full=Patatin-11; EC=3.1.1.-; Flags: P... 39 0.54
CP000352_2134(CP000352|pid:none) Ralstonia metallidurans CH34, c... 38 0.71
BT038613_1(BT038613|pid:none) Zea mays full-length cDNA clone ZM... 38 0.71
CP000388_210(CP000388|pid:none) Pseudoalteromonas atlantica T6c,... 38 0.71
AE006914_775(AE006914|pid:none) Rickettsia conorii str. Malish 7... 38 0.71
(Q2MY45) RecName: Full=Patatin-06; EC=3.1.1.-; Flags: P... 38 0.71
CP000270_2776(CP000270|pid:none) Burkholderia xenovorans LB400 c... 38 0.92
AE016958_1765(AE016958|pid:none) Mycobacterium avium subsp. para... 38 0.92
(Q42502) RecName: Full=Patatin-2-Kuras 3; EC=3.1.1.-; F... 38 0.92
AM746676_642(AM746676|pid:none) Sorangium cellulosum 'So ce 56' ... 38 0.92
AP008957_4854(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 38 0.92
CP001230_967(CP001230|pid:none) Persephonella marina EX-H1, comp... 38 0.92
AM920429_239(AM920429|pid:none) Penicillium chrysogenum Wisconsi... 38 0.92
AP009153_3381(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 38 0.92
CP000479_2369(CP000479|pid:none) Mycobacterium avium 104, comple... 38 0.92
AP007171_777(AP007171|pid:none) Aspergillus oryzae RIB40 genomic... 38 0.92
(Q2MY41) RecName: Full=Patatin-10; EC=3.1.1.-; Flags: P... 37 1.2
(Q2MY37) RecName: Full=Patatin-14; EC=3.1.1.-; Flags: P... 37 1.2
B26017(B26017)patatin T58 precursor - potato 37 1.2
CP000891_4219(CP000891|pid:none) Shewanella baltica OS195, compl... 37 1.2
EU419875_1(EU419875|pid:none) Gallus gallus PNPLA3 mRNA, partial... 37 1.2
S05593(S05593) patatin precursor (clone pPATB1) - potato (fragme... 37 1.2
CP001111_35(CP001111|pid:none) Stenotrophomonas maltophilia R551... 37 1.2
CP000563_212(CP000563|pid:none) Shewanella baltica OS155, comple... 37 1.2
AE017198_626(AE017198|pid:none) Lactobacillus johnsonii NCC 533,... 37 1.2
(P15477) RecName: Full=Patatin-B2; EC=3.1.1.-; Flags: P... 37 1.2
BT039730_1(BT039730|pid:none) Zea mays full-length cDNA clone ZM... 37 1.2
(Q2MY52) RecName: Full=Patatin group M-2; EC=3.1.1.-; F... 37 1.2
(P15476) RecName: Full=Patatin-B1; EC=3.1.1.-; Flags: P... 37 1.2
CP000888_181(CP000888|pid:none) Brucella abortus S19 chromosome ... 37 1.2
(P11768) RecName: Full=Patatin group M-1; EC=3.1.1.-; A... 37 1.2
CU928161_2010(CU928161|pid:none) Escherichia coli S88 chromosome... 37 1.6
AL646052_1179(AL646052|pid:none) Ralstonia solanacearum GMI1000 ... 37 1.6
AM746676_5510(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 37 1.6
CS163782_1(CS163782|pid:none) Sequence 13 from Patent WO20050830... 37 1.6
AJ620477_24(AJ620477|pid:none) Angiococcus disciformis partial O... 37 1.6
CU914168_1676(CU914168|pid:none) Ralstonia solanacearum strain I... 37 1.6
AP006716_2556(AP006716|pid:none) Staphylococcus haemolyticus JCS... 37 1.6
AJ620477_25(AJ620477|pid:none) Angiococcus disciformis partial O... 37 1.6
AM920428_498(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 37 1.6
CU694395_64(CU694395|pid:none) Ralstonia solanacearum strain Mol... 37 1.6
AB426060_28(AB426060|pid:none) Escherichia coli O111:H- DNA, gen... 37 1.6
CP000462_2851(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 37 1.6
CP001392_732(CP001392|pid:none) Diaphorobacter sp. TPSY, complet... 37 2.1
AE004439_638(AE004439|pid:none) Pasteurella multocida subsp. mul... 37 2.1
CP000539_767(CP000539|pid:none) Acidovorax sp. JS42, complete ge... 37 2.1
T25804(T25804)hypothetical protein H03E18.1 - Caenorhabditis ele... 37 2.1
AF498099_1(AF498099|pid:none) Solanum chacoense patatin storage ... 37 2.1
(Q3YJT3) RecName: Full=Patatin-2-Kuras 1; EC=3.1.1.-; F... 37 2.1
AE009951_1084(AE009951|pid:none) Fusobacterium nucleatum subsp. ... 36 2.7
CP000492_1968(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 36 2.7
CP000975_2182(CP000975|pid:none) Methylacidiphilum infernorum V4... 36 2.7
CP000020_1811(CP000020|pid:none) Vibrio fischeri ES114 chromosom... 36 2.7
CP000353_1273(CP000353|pid:none) Ralstonia metallidurans CH34 me... 36 2.7
CP000325_1439(CP000325|pid:none) Mycobacterium ulcerans Agy99, c... 36 2.7
CP000854_2128(CP000854|pid:none) Mycobacterium marinum M, comple... 36 2.7
CP000269_2403(CP000269|pid:none) Janthinobacterium sp. Marseille... 36 2.7
CP001110_2217(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 36 2.7
CR628337_2733(CR628337|pid:none) Legionella pneumophila str. Len... 36 3.5
AE015928_896(AE015928|pid:none) Bacteroides thetaiotaomicron VPI... 36 3.5
CP000896_384(CP000896|pid:none) Acholeplasma laidlawii PG-8A, co... 36 3.5
CP000514_805(CP000514|pid:none) Marinobacter aquaeolei VT8, comp... 36 3.5
CP000738_415(CP000738|pid:none) Sinorhizobium medicae WSM419, co... 36 3.5
CP000675_2979(CP000675|pid:none) Legionella pneumophila str. Cor... 36 3.5
CP000777_1418(CP000777|pid:none) Leptospira biflexa serovar Pato... 36 3.5
BX908798_1639(BX908798|pid:none) Parachlamydia-related symbiont ... 35 4.6
CP000090_2106(CP000090|pid:none) Ralstonia eutropha JMP134 chrom... 35 4.6
AE010301_252(AE010301|pid:none) Leptospira interrogans serovar L... 35 4.6
AP006841_2408(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 35 4.6
CP000267_3471(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 35 4.6
AP009179_1173(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic ... 35 4.6
CT990606_2(CT990606|pid:none) Zebrafish DNA sequence from clone ... 35 4.6
CP000108_287(CP000108|pid:none) Chlorobium chlorochromatii CaD3,... 35 4.6
A81002(A81002) conserved hypothetical protein NMB2139 [imported]... 35 4.6
BC153514_1(BC153514|pid:none) Danio rerio zgc:162327, mRNA (cDNA... 35 4.6
(Q3YJT2) RecName: Full=Patatin-2-Kuras 2; EC=3.1.1.-; F... 35 4.6
BX294013_9(BX294013|pid:none) Neurospora crassa DNA linkage grou... 35 4.6
CP000381_1998(CP000381|pid:none) Neisseria meningitidis 053442, ... 35 4.6
CP000351_186(CP000351|pid:none) Leptospira borgpetersenii serova... 35 4.6
AL591688_805(AL591688|pid:none) Sinorhizobium meliloti 1021 comp... 35 4.6
CP000349_193(CP000349|pid:none) Leptospira borgpetersenii serova... 35 4.6
CP000514_496(CP000514|pid:none) Marinobacter aquaeolei VT8, comp... 35 6.0
FM180568_1112(FM180568|pid:none) Escherichia coli 0127:H6 E2348/... 35 6.0
CP000450_2061(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 35 6.0
BA000007_2798(BA000007|pid:none) Escherichia coli O157:H7 str. S... 35 6.0
CP001164_1259(CP001164|pid:none) Escherichia coli O157:H7 str. E... 35 6.0
(Q6V9D9) RecName: Full=NADH-ubiquinone oxidoreductase chain 5; ... 35 6.0
AE014075_2453(AE014075|pid:none) Escherichia coli CFT073, comple... 35 6.0
DQ077748_3(DQ077748|pid:none) Uncultured bacterium clone pLR12 p... 35 6.0
AE016825_2715(AE016825|pid:none) Chromobacterium violaceum ATCC ... 35 7.8
AE003849_66(AE003849|pid:none) Xylella fastidiosa 9a5c, complete... 35 7.8
CP000412_540(CP000412|pid:none) Lactobacillus delbrueckii subsp.... 35 7.8
CP000644_1885(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 35 7.8
CP001100_1415(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 35 7.8
BT021623_1(BT021623|pid:none) Bos taurus patatin-like phospholip... 35 7.8
CP001068_821(CP001068|pid:none) Ralstonia pickettii 12J chromoso... 35 7.8
CP001052_2439(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 35 7.8
CP000083_2756(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 35 7.8
AE016877_2548(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 35 7.8
CP001176_2569(CP001176|pid:none) Bacillus cereus B4264, complete... 35 7.8
CP000542_692(CP000542|pid:none) Verminephrobacter eiseniae EF01-... 35 7.8
CP000140_3128(CP000140|pid:none) Parabacteroides distasonis ATCC... 35 7.8
>EU419878_1(EU419878|pid:none) Gallus gallus PNPLA8 mRNA, complete
cds.
Length = 803
Score = 72.4 bits (176), Expect = 3e-11
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 9/182 (4%)
Frame = +1
Query: 778 KTKIISNYN-----KKHE----NVKVSEALNASSAAPIYFKPVEINGHKYVDGGIGYQNN 930
K + NYN K H K+ +A+ ASSAAP YF+ + + DGG+ NN
Sbjct: 597 KAFVFRNYNHFPGVKSHYIGGCQYKLWQAIRASSAAPGYFQEYVLGNDLHQDGGL-LLNN 655
Query: 931 PILLAHKECLKLFGDMTEYLFISLGTGTFEATSTVISPSSKKIIFQAQETFKNAVGLIKN 1110
P LA EC L+ D+ +SLGTG +E+ + T+ + + N
Sbjct: 656 PSALAVHECKCLWPDVPLQCLVSLGTGRYESAG------------KTNVTYTSLKAKLTN 703
Query: 1111 AASSIGDSETPHQIFKQMSNYKNVSYYRFNPKLTQNFSLSDTSKSSLDAMETEARQYMQS 1290
SS D+E H + + +Y+RFNP + ++ L ++ K L ++T+ +Y++
Sbjct: 704 VISSATDTEEVHTMLDAL--LPPDTYFRFNPLMHEDIPLDESRKEKLSQLQTDGIRYLER 761
Query: 1291 QD 1296
+
Sbjct: 762 NE 763
Score = 56.6 bits (135), Expect = 2e-06
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Frame = +3
Query: 297 VIVVTLDGGGIRGIVTLTILRELQKMMGLDIIDKAHMVCGTSTGSIIA-MGRSKPLPYDE 473
V V+ +DGGG RG+V L LR+L+++ G + +CG STG+I+A M +P D+
Sbjct: 463 VRVLAIDGGGTRGLVALQTLRKLEELTGKPVHHLFDYICGVSTGAILAFMLGLFHIPLDD 522
Query: 474 IVEIYKNFGKVIFK-----GTVK 527
E+Y G +FK GTVK
Sbjct: 523 CEELYHKLGSDVFKQNVIVGTVK 545
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,666,643,580
Number of extensions: 30412732
Number of successful extensions: 106640
Number of sequences better than 10.0: 283
Number of HSP's gapped: 106371
Number of HSP's successfully gapped: 368
Length of query: 440
Length of database: 1,040,966,779
Length adjustment: 132
Effective length of query: 308
Effective length of database: 618,001,159
Effective search space: 190344356972
Effective search space used: 190344356972
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
3 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |