| Contig-U09660-1 |
| Contig ID |
Contig-U09660-1 |
| Contig update |
2002. 9.13 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1791 |
| Chromosome number (1..6, M) |
1 |
| Chromosome length |
4919822 |
| Start point |
3525747 |
| End point |
3527454 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
17 |
| Number of EST |
21 |
| Link to clone list |
U09660 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.16 |
| Homology vs DNA |
Query= Contig-U09660-1 (Contig-U09660-1Q) /CSM_Contig/Contig-U09660-1Q.Seq.d
(1801 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ432213) Dictyostelium discoideum cDNA clone:ddv18d06, 3' ... 369 0.0 6
(AU266158) Dictyostelium discoideum vegetative cDNA clone:VS... 963 0.0 1
(BJ432999) Dictyostelium discoideum cDNA clone:ddv20p10, 3' ... 329 0.0 9
(BJ433909) Dictyostelium discoideum cDNA clone:ddv23f10, 3' ... 226 0.0 8
(BJ434129) Dictyostelium discoideum cDNA clone:ddv23p24, 3' ... 226 0.0 8
(BJ433911) Dictyostelium discoideum cDNA clone:ddv23f12, 3' ... 226 0.0 7
(AU039871) Dictyostelium discoideum slug cDNA, clone SLG627. 226 0.0 8
(BJ347513) Dictyostelium discoideum cDNA clone:dda27g09, 3' ... 222 0.0 8
(BJ433860) Dictyostelium discoideum cDNA clone:ddv23m02, 3' ... 331 0.0 4
(BJ433336) Dictyostelium discoideum cDNA clone:ddv21a17, 3' ... 210 0.0 7
(AU263043) Dictyostelium discoideum vegetative cDNA clone:VS... 224 0.0 7
(AU034425) Dictyostelium discoideum slug cDNA, clone SLC857. 222 0.0 7
(BJ435338) Dictyostelium discoideum cDNA clone:ddv26g21, 3' ... 226 e-177 6
(C94241) Dictyostelium discoideum slug cDNA, clone SSK579. 214 e-113 5
(AU074958) Dictyostelium discoideum slug cDNA, clone SSM582. 222 2e-98 3
(AU061077) Dictyostelium discoideum slug cDNA, clone SLC857. 198 4e-70 3
(AU074397) Dictyostelium discoideum slug cDNA, clone SSK579. 212 3e-50 1
(BJ430282) Dictyostelium discoideum cDNA clone:ddv6o13, 3' e... 155 2e-48 2
(BJ435796) Dictyostelium discoideum cDNA clone:ddv28m10, 3' ... 165 6e-37 2
(EJ164237) 1092344059430 Global-Ocean-Sampling_GS-27-01-01-1... 34 0.20 4
(AC106377) Rattus norvegicus clone CH230-114N22, WORKING DRA... 50 0.30 1
(AC095739) Rattus norvegicus clone CH230-1J4, *** SEQUENCING... 50 0.30 1
(AC091409) Rattus norvegicus clone CH230-1B4, *** SEQUENCING... 50 0.30 1
(BJ416879) Dictyostelium discoideum cDNA clone:ddv27j18, 5' ... 50 0.30 1
(BJ416566) Dictyostelium discoideum cDNA clone:ddv26g21, 5' ... 50 0.30 1
(BJ414091) Dictyostelium discoideum cDNA clone:ddv18d06, 5' ... 50 0.30 1
(BJ330082) Dictyostelium discoideum cDNA clone:dda27g09, 5' ... 50 0.30 1
(EY216786) PRAG-aaa59a03.g1 Sand_fly_EST_Normalized Phleboto... 34 0.83 2
(EY213012) PRAG-aaa68d02.g1 Sand_fly_EST_Normalized Phleboto... 34 0.83 2
(FG110769) PRAG-aac70b01.g1 Sand_fly_EST_Normalized Phleboto... 34 0.84 2
(EJ464683) 1095388044959 Global-Ocean-Sampling_GS-28-01-01-1... 48 1.2 1
(BJ415622) Dictyostelium discoideum cDNA clone:ddv23m02, 5' ... 48 1.2 1
(AC134223) Rattus norvegicus clone CH230-10C12, *** SEQUENCI... 46 1.8 2
(FC765356) CBBN2423.fwd CBBN Lottia gigantea 3,4,5,6.5d Larv... 36 3.1 2
(CR956407) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 3.2 5
(BX511144) Zebrafish DNA sequence from clone CH211-39L20 in ... 46 4.6 1
(BX005400) Zebrafish DNA sequence from clone CH211-203C7. 46 4.6 1
(EK062262) 1092960094034 Global-Ocean-Sampling_GS-31-01-01-1... 46 4.6 1
(EK015862) 1092955233971 Global-Ocean-Sampling_GS-31-01-01-1... 46 4.6 1
(CE256735) tigr-gss-dog-17000345542937 Dog Library Canis lup... 46 4.6 1
(AC223352) Bos taurus clone CH240-421F19, WORKING DRAFT SEQU... 40 5.7 6
(CR933398) Paramecium tetraurelia, Small GTPase rab, putativ... 40 6.0 2
(FI024451) CHO_OF6933xn12r1.ab1 CHO_OF6 Nicotiana tabacum ge... 36 6.8 2
>(BJ432213) Dictyostelium discoideum cDNA clone:ddv18d06, 3' end,
single read.
Length = 709
Score = 369 bits (186), Expect(6) = 0.0
Identities = 186/186 (100%)
Strand = Plus / Minus
Query: 772 gaacattgttagagaaaaggatggtaaaccaaagggttatggtttcattaaatactcaac 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 gaacattgttagagaaaaggatggtaaaccaaagggttatggtttcattaaatactcaac 650
Query: 832 cagagatgaatctgaaaatgccttaagagaaatcgatggtaaacatactcttccaggttc 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 cagagatgaatctgaaaatgccttaagagaaatcgatggtaaacatactcttccaggttc 590
Query: 892 aaatcttccaatcatcgttaaattcgccgatactgaaagacaaaagagaaagaagttact 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 aaatcttccaatcatcgttaaattcgccgatactgaaagacaaaagagaaagaagttact 530
Query: 952 cggtaa 957
||||||
Sbjct: 529 cggtaa 524
Score = 226 bits (114), Expect(6) = 0.0
Identities = 114/114 (100%)
Strand = Plus / Minus
Query: 1043 aatcaataccaaccattcttctatggtcaaaactctcaaatgtcacaagctatgggtaat 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aatcaataccaaccattcttctatggtcaaaactctcaaatgtcacaagctatgggtaat 379
Query: 1103 aatggttatcgtggttatcaacaacaaccaaatgttaattttggtatgatgcaa 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aatggttatcgtggttatcaacaacaaccaaatgttaattttggtatgatgcaa 325
Score = 222 bits (112), Expect(6) = 0.0
Identities = 112/112 (100%)
Strand = Plus / Minus
Query: 1221 gaatcaaatgatttattcatttattacctcccattcacttatggtgatgaagaattaaaa 1280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaatcaaatgatttattcatttattacctcccattcacttatggtgatgaagaattaaaa 202
Query: 1281 caactttttgctccatatggtaatgtaataagctcaaaagttttcattgata 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caactttttgctccatatggtaatgtaataagctcaaaagttttcattgata 150
Score = 182 bits (92), Expect(6) = 0.0
Identities = 92/92 (100%)
Strand = Plus / Minus
Query: 1334 aaaatactcaacaatctaaatgttttggttttgtatcttatgataacactcaatcagcca 1393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 aaaatactcaacaatctaaatgttttggttttgtatcttatgataacactcaatcagcca 90
Query: 1394 tttgctgcaattcaagaattaaatggtcgtgc 1425
||||||||||||||||||||||||||||||||
Sbjct: 89 tttgctgcaattcaagaattaaatggtcgtgc 58
Score = 52.0 bits (26), Expect(6) = 0.0
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 1156 aaggtaaccaagcttttgattataat 1181
||||||||||||||||||||||||||
Sbjct: 326 aaggtaaccaagcttttgattataat 301
Score = 50.1 bits (25), Expect(6) = 0.0
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1433 aaggtaaaaaactcaaggttaatttcaag 1461
|||||||||||| ||||||||||||||||
Sbjct: 52 aaggtaaaaaacccaaggttaatttcaag 24
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,323,308,749
Number of extensions: 80354017
Number of successful extensions: 6535097
Number of sequences better than 10.0: 43
Length of query: 1801
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1777
Effective length of database: 97,308,875,965
Effective search space: 172917872589805
Effective search space used: 172917872589805
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.26 |
| Homology vs Protein |
Query= Contig-U09660-1 (Contig-U09660-1Q) /CSM_Contig/Contig-U09660-1Q.Seq.d
(1801 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC005275_3(AC005275|pid:none) Arabidopsis thaliana BAC F4C21 fro... 148 6e-34
AY065261_1(AY065261|pid:none) Arabidopsis thaliana putative ribo... 148 6e-34
AK316961_1(AK316961|pid:none) Arabidopsis thaliana AT4G03110 mRN... 148 6e-34
(Q6DGV1) RecName: Full=CUG-BP- and ETR-3-like factor 4; ... 147 1e-33
(Q7ZWM3) RecName: Full=CUG-BP- and ETR-3-like factor 3-B; ... 147 2e-33
CR760829_1(CR760829|pid:none) Xenopus tropicalis finished cDNA, ... 146 3e-33
(Q91579) RecName: Full=CUG-BP- and ETR-3-like factor 3-A; ... 146 3e-33
U16800_1(U16800|pid:none) Xenopus laevis elav-type ribonucleopro... 146 3e-33
BC154063_1(BC154063|pid:none) Xenopus tropicalis trinucleotide r... 146 3e-33
EF520347_1(EF520347|pid:none) Gallus gallus CUG-BP and ETR-3-lik... 145 6e-33
BC045711_1(BC045711|pid:none) Homo sapiens bruno-like 4, RNA bin... 145 6e-33
AF248650_1(AF248650|pid:none) Homo sapiens RNA-binding protein B... 145 6e-33
BC163416_1(BC163416|pid:none) Danio rerio bruno-like 5, RNA bind... 144 8e-33
(Q9IBD1) RecName: Full=CUG-BP- and ETR-3-like factor 3; ... 143 2e-32
AB032725_1(AB032725|pid:none) Danio rerio mRNA for Etr-1, comple... 143 2e-32
(Q08E07) RecName: Full=CUG-BP- and ETR-3-like factor 3; ... 143 2e-32
AY165003_1(AY165003|pid:none) Homo sapiens CUG-BP and ETR-3 like... 143 2e-32
BC057553_1(BC057553|pid:none) Mus musculus trinucleotide repeat ... 143 2e-32
(Q5SZQ8) RecName: Full=CUG-BP- and ETR-3-like factor 3; ... 143 2e-32
AL589765_5(AL589765|pid:none) Human DNA sequence from clone RP11... 143 2e-32
AK117246_1(AK117246|pid:none) Arabidopsis thaliana At1g03460 mRN... 143 2e-32
BC146142_1(BC146142|pid:none) Bos taurus bruno-like 4, RNA bindi... 142 4e-32
(Q4R535) RecName: Full=CUG-BP- and ETR-3-like factor 4; ... 142 4e-32
AK295009_1(AK295009|pid:none) Homo sapiens cDNA FLJ54925 complet... 142 4e-32
AF515450_1(AF515450|pid:none) Mus musculus bruno-like 4 protein ... 142 4e-32
AL929135_1(AL929135|pid:none) Zebrafish DNA sequence from clone ... 142 5e-32
BC143226_1(BC143226|pid:none) Homo sapiens trinucleotide repeat ... 140 2e-31
(Q8CIN6) RecName: Full=CUG-BP- and ETR-3-like factor 3; ... 140 2e-31
AK099501_1(AK099501|pid:none) Oryza sativa Japonica Group cDNA c... 140 2e-31
AK073796_1(AK073796|pid:none) Oryza sativa Japonica Group cDNA c... 140 2e-31
AP008211_995(AP008211|pid:none) Oryza sativa (japonica cultivar-... 140 2e-31
AB209774_1(AB209774|pid:none) Homo sapiens mRNA for bruno-like 4... 138 6e-31
(Q5NVC8) RecName: Full=CUG-BP- and ETR-3-like factor 4; ... 138 6e-31
EU975915_1(EU975915|pid:none) Zea mays clone 505277 RNA binding ... 138 6e-31
(A0JM51) RecName: Full=CUG-BP- and ETR-3-like factor 5; ... 137 1e-30
EU743745_1(EU743745|pid:none) Xenopus laevis RNA binding protein... 137 1e-30
BC048405_1(BC048405|pid:none) Mus musculus bruno-like 4, RNA bin... 137 1e-30
CR859631_1(CR859631|pid:none) Pongo abelii mRNA; cDNA DKFZp459F0... 137 1e-30
CR860590_1(CR860590|pid:none) Pongo abelii mRNA; cDNA DKFZp459H0... 137 2e-30
AK296004_1(AK296004|pid:none) Homo sapiens cDNA FLJ56494 complet... 137 2e-30
(Q96J87) RecName: Full=CUG-BP- and ETR-3-like factor 6; ... 137 2e-30
BC030835_1(BC030835|pid:none) Homo sapiens bruno-like 6, RNA bin... 137 2e-30
CR926110_1(CR926110|pid:none) Pongo abelii mRNA; cDNA DKFZp459J0... 136 2e-30
AC002560_8(AC002560|pid:none) Genomic sequence for Arabidopsis t... 135 5e-30
T00912(T00912)ribonucleoprotein homolog F21B7.26 - Arabidopsis t... 135 5e-30
AK074596_1(AK074596|pid:none) Homo sapiens cDNA FLJ90115 fis, cl... 135 6e-30
BC004145_1(BC004145|pid:none) Homo sapiens trinucleotide repeat ... 134 1e-29
AL589765_4(AL589765|pid:none) Human DNA sequence from clone RP11... 134 1e-29
AB209067_1(AB209067|pid:none) Homo sapiens mRNA for bruno-like 5... 133 2e-29
(Q8N6W0) RecName: Full=CUG-BP- and ETR-3-like factor 5; ... 133 2e-29
AF329266_1(AF329266|pid:none) Homo sapiens CUG-BP and ETR-3 like... 133 2e-29
AM436394_3(AM436394|pid:none) Vitis vinifera contig VV78X113742.... 128 6e-28
AY342388_1(AY342388|pid:none) Caenorhabditis elegans putative RN... 128 8e-28
AE014134_2272(AE014134|pid:none) Drosophila melanogaster chromos... 126 2e-27
DQ021476_1(DQ021476|pid:none) Danio rerio napor protein isoform ... 126 2e-27
AL935165_2(AL935165|pid:none) Zebrafish DNA sequence from clone ... 126 2e-27
(Q6P0B1) RecName: Full=CUG-BP- and ETR-3-like factor 2; ... 126 2e-27
AE014134_2273(AE014134|pid:none) Drosophila melanogaster chromos... 126 2e-27
DQ021474_1(DQ021474|pid:none) Danio rerio napor protein short is... 126 2e-27
AL845492_3(AL845492|pid:none) Mouse DNA sequence from clone RP23... 126 3e-27
AK151818_1(AK151818|pid:none) Mus musculus bone marrow macrophag... 126 3e-27
AL845492_2(AL845492|pid:none) Mouse DNA sequence from clone RP23... 126 3e-27
AF036956_1(AF036956|pid:none) Homo sapiens neuroblastoma apoptos... 126 3e-27
AK137292_1(AK137292|pid:none) Mus musculus adult male urinary bl... 126 3e-27
AJ010351_1(AJ010351|pid:none) Rattus norvegicus mRNA for ETR-R3a... 126 3e-27
AL845515_7(AL845515|pid:none) Mouse DNA sequence from clone RP23... 126 3e-27
(Q3U7J8) RecName: Full=CUG-BP- and ETR-3-like factor 2; ... 126 3e-27
AF090696_1(AF090696|pid:none) Mus musculus apoptosis-related RNA... 126 3e-27
AF090694_1(AF090694|pid:none) Homo sapiens apoptosis-related RNA... 126 3e-27
AL845492_1(AL845492|pid:none) Mouse DNA sequence from clone RP23... 126 3e-27
AK314087_1(AK314087|pid:none) Homo sapiens cDNA, FLJ94762, highl... 126 3e-27
AK164914_1(AK164914|pid:none) Mus musculus 0 day neonate lung cD... 126 3e-27
(O95319) RecName: Full=CUG-BP- and ETR-3-like factor 2; ... 126 3e-27
CR860449_1(CR860449|pid:none) Pongo abelii mRNA; cDNA DKFZp459A1... 126 3e-27
(Q7T2T1) RecName: Full=CUG-BP- and ETR-3-like factor 2; ... 125 4e-27
AY288985_1(AY288985|pid:none) Gallus gallus ELAV-type RNA-bindin... 125 4e-27
U80455_2(U80455|pid:none) Caenorhabditis elegans cosmid T01D1, c... 125 4e-27
EF523766_1(EF523766|pid:none) Caenorhabditis elegans ELAV-type R... 125 4e-27
EF523768_1(EF523768|pid:none) Caenorhabditis elegans ELAV-type R... 125 4e-27
U80455_3(U80455|pid:none) Caenorhabditis elegans cosmid T01D1, c... 125 4e-27
(Q7ZXE2) RecName: Full=CUG-BP- and ETR-3-like factor 2; ... 125 5e-27
EF520343_1(EF520343|pid:none) Gallus gallus CUG binding protein ... 125 7e-27
CR861202_1(CR861202|pid:none) Pongo abelii mRNA; cDNA DKFZp459F0... 124 9e-27
AB384673_1(AB384673|pid:none) Synthetic construct DNA, clone: pF... 124 1e-26
CR861433_1(CR861433|pid:none) Pongo abelii mRNA; cDNA DKFZp459J2... 124 1e-26
U58976_1(U58976|pid:none) Drosophila melanogaster ovarian RNA-bi... 124 1e-26
U73846_1(U73846|pid:none) Drosophila melanogaster testis-specifi... 124 1e-26
AE014134_2269(AE014134|pid:none) Drosophila melanogaster chromos... 124 1e-26
AE014134_2267(AE014134|pid:none) Drosophila melanogaster chromos... 124 1e-26
AK304430_1(AK304430|pid:none) Homo sapiens cDNA FLJ61559 complet... 123 2e-26
(Q6PF35) RecName: Full=CUG-BP- and ETR-3-like factor 1-B; ... 123 3e-26
(Q5F3T7) RecName: Full=CUG-BP- and ETR-3-like factor 1; ... 122 3e-26
AY805329_1(AY805329|pid:none) Pisum sativum FCA gamma (FCA gamma... 122 3e-26
AJ237848_1(AJ237848|pid:none) Brassica napus partial fca gene, h... 122 4e-26
AK014492_1(AK014492|pid:none) Mus musculus 14 days embryo liver ... 122 4e-26
AL672241_9(AL672241|pid:none) Mouse DNA sequence from clone RP23... 122 4e-26
AK156725_1(AK156725|pid:none) Mus musculus activated spleen cDNA... 122 4e-26
AK143698_1(AK143698|pid:none) Mus musculus 6 days neonate spleen... 122 4e-26
AF267535_1(AF267535|pid:none) Mus musculus CUG-binding protein L... 122 4e-26
AF414188_1(AF414188|pid:none) Brassica napus FCA gamma gene, com... 122 4e-26
Z82990_1(Z82990|pid:none) A.thaliana mRNA for FCA delta. 122 6e-26
A85181(A85181) FCA delta protein [imported] - Arabidopsis thalia... 122 6e-26
BC151433_1(BC151433|pid:none) Bos taurus CUG triplet repeat, RNA... 122 6e-26
U63289_1(U63289|pid:none) Human RNA-binding protein CUG-BP/hNab5... 122 6e-26
AL161543_28(AL161543|pid:none) Arabidopsis thaliana DNA chromoso... 122 6e-26
(Q9IBD0) RecName: Full=CUG-BP- and ETR-3-like factor 1; ... 121 7e-26
BT066428_1(BT066428|pid:none) Zea mays full-length cDNA clone ZM... 119 4e-25
BC070706_1(BC070706|pid:none) Xenopus laevis CUG-BP- and ETR-3-l... 117 1e-24
EU743743_1(EU743743|pid:none) Xenopus laevis RNA binding protein... 115 4e-24
AY230366_1(AY230366|pid:none) Triticum aestivum clone 2Mb-B6 FCA... 115 5e-24
AY230339_1(AY230339|pid:none) Triticum aestivum clone 3W2c-C11 F... 115 5e-24
AY230378_1(AY230378|pid:none) Triticum aestivum clone 2Mb-A5 FCA... 115 5e-24
AY230402_1(AY230402|pid:none) Triticum aestivum clone A1 FCA-D1 ... 115 5e-24
AY230398_1(AY230398|pid:none) Triticum aestivum FCA-A1 (Fca) mRN... 115 5e-24
AY230384_1(AY230384|pid:none) Triticum aestivum clone 1Nb-H5 FCA... 115 5e-24
AY230397_1(AY230397|pid:none) Triticum aestivum clone 1Nb-H10 FC... 115 5e-24
AY230367_1(AY230367|pid:none) Triticum aestivum clone 2Mb-H8 FCA... 115 5e-24
AY230324_1(AY230324|pid:none) Triticum aestivum clone 3W2c-A3 FC... 115 7e-24
AY230349_1(AY230349|pid:none) Triticum aestivum clone 4Sc-D4 FCA... 115 7e-24
AY230357_1(AY230357|pid:none) Triticum aestivum clone 4Sc-H10 FC... 115 7e-24
AY230326_1(AY230326|pid:none) Triticum aestivum clone 3W2c-D9 FC... 114 9e-24
AY230376_1(AY230376|pid:none) Triticum aestivum clone 2Mb-C3e FC... 114 9e-24
AY230355_1(AY230355|pid:none) Triticum aestivum clone 4Sc-D7 FCA... 114 9e-24
AY230388_1(AY230388|pid:none) Triticum aestivum clone 1Nb-E7 FCA... 114 9e-24
BC049453_1(BC049453|pid:none) Danio rerio CUG triplet repeat, RN... 114 9e-24
AM910993_114(AM910993|pid:none) Plasmodium knowlesi strain H chr... 114 1e-23
AY230334_1(AY230334|pid:none) Triticum aestivum clone 3W2c-A10 F... 114 1e-23
AY230346_1(AY230346|pid:none) Triticum aestivum clone 4Sc-E3 FCA... 114 2e-23
AP008215_54(AP008215|pid:none) Oryza sativa (japonica cultivar-g... 114 2e-23
AY230372_1(AY230372|pid:none) Triticum aestivum clone 2Mb-E11 FC... 114 2e-23
AY230327_1(AY230327|pid:none) Triticum aestivum clone 3W2c-D3 FC... 114 2e-23
AP006062_17(AP006062|pid:none) Oryza sativa Japonica Group genom... 114 2e-23
AY230335_1(AY230335|pid:none) Triticum aestivum clone 3W2-A1 FCA... 113 2e-23
AY230368_1(AY230368|pid:none) Triticum aestivum clone 2M-H7 FCA ... 112 3e-23
AL844509_578(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 112 4e-23
AC119289_14(AC119289|pid:none) Oryza sativa (japonica cultivar-g... 112 6e-23
AY230336_1(AY230336|pid:none) Triticum aestivum clone 3W2b-F7 FC... 110 2e-22
AK100642_1(AK100642|pid:none) Oryza sativa Japonica Group cDNA c... 109 3e-22
AY230386_1(AY230386|pid:none) Triticum aestivum clone 1Nb-A5 FCA... 109 3e-22
BT029831_1(BT029831|pid:none) Bos taurus trinucleotide repeat co... 105 4e-21
AY230323_1(AY230323|pid:none) Triticum aestivum mutant FCA-D1 (F... 100 2e-19
AF314172_1(AF314172|pid:none) Mus musculus BRUNOL2 (Brunol2) mRN... 99 4e-19
AM910995_382(AM910995|pid:none) Plasmodium knowlesi strain H chr... 99 7e-19
FN357392_14(FN357392|pid:none) Schistosoma mansoni genome sequen... 98 1e-18
AE014187_93(AE014187|pid:none) Plasmodium falciparum 3D7 chromos... 97 2e-18
AX969846_1(AX969846|pid:none) Sequence 649 from Patent EP1104808. 96 6e-18
AC135465_22(AC135465|pid:none) Medicago truncatula clone mth2-24... 96 6e-18
EF520345_1(EF520345|pid:none) Gallus gallus CUG-BP and ETR-3-lik... 92 5e-17
(Q0V9L3) RecName: Full=CUG-BP- and ETR-3-like factor 4; ... 92 8e-17
AE014296_2444(AE014296|pid:none) Drosophila melanogaster chromos... 91 2e-16
AK299983_1(AK299983|pid:none) Homo sapiens cDNA FLJ50653 complet... 88 1e-15
AK294382_1(AK294382|pid:none) Homo sapiens cDNA FLJ55572 complet... 87 2e-15
AK229352_1(AK229352|pid:none) Arabidopsis thaliana mRNA for puta... 87 2e-15
AK034216_1(AK034216|pid:none) Mus musculus adult male diencephal... 86 4e-15
AK083461_1(AK083461|pid:none) Mus musculus 9 days embryo whole b... 85 8e-15
AK295511_1(AK295511|pid:none) Homo sapiens cDNA FLJ51739 complet... 85 8e-15
AY538250_1(AY538250|pid:none) Bradysia coprophila sex-lethal (Sx... 84 2e-14
AK301013_1(AK301013|pid:none) Homo sapiens cDNA FLJ60076 complet... 83 3e-14
AK148528_1(AK148528|pid:none) Mus musculus adult pancreas islet ... 83 3e-14
AK034536_1(AK034536|pid:none) Mus musculus 12 days embryo embryo... 83 3e-14
AB168603_1(AB168603|pid:none) Macaca fascicularis testis cDNA cl... 83 3e-14
BC072716_1(BC072716|pid:none) Danio rerio zgc:91918, mRNA (cDNA ... 82 5e-14
AB209294_1(AB209294|pid:none) Homo sapiens mRNA for ELAV (embryo... 82 5e-14
AL837505_1(AL837505|pid:none) Mouse DNA sequence from clone RP23... 82 5e-14
AY035379_1(AY035379|pid:none) Mus musculus ELAV-like neuronal pr... 82 5e-14
BC094189_1(BC094189|pid:none) Xenopus laevis ELAV (embryonic let... 82 5e-14
I39077(I39077) RNA-binding protein Hel-N2 - human &U29943_1(U29... 82 5e-14
AL837505_7(AL837505|pid:none) Mouse DNA sequence from clone RP23... 82 5e-14
AK141919_1(AK141919|pid:none) Mus musculus 12 days embryo spinal... 82 5e-14
BC127338_1(BC127338|pid:none) Xenopus tropicalis ELAV (embryonic... 82 5e-14
AY035378_1(AY035378|pid:none) Mus musculus ELAV-like neuronal pr... 82 5e-14
AL837505_4(AL837505|pid:none) Mouse DNA sequence from clone RP23... 82 5e-14
CR860401_1(CR860401|pid:none) Pongo abelii mRNA; cDNA DKFZp459N1... 82 5e-14
AL837505_6(AL837505|pid:none) Mouse DNA sequence from clone RP23... 82 5e-14
AL837505_2(AL837505|pid:none) Mouse DNA sequence from clone RP23... 82 5e-14
BC170539_1(BC170539|pid:none) Xenopus laevis elav like 1, mRNA (... 82 5e-14
AX463221_1(AX463221|pid:none) Sequence 22 from Patent WO0249625.... 82 5e-14
(Q60899) RecName: Full=ELAV-like protein 2; AltName: Full=Hu-ant... 82 5e-14
AL161628_3(AL161628|pid:none) Human DNA sequence from clone RP11... 82 5e-14
AY178581_1(AY178581|pid:none) Sciara ocellaris sex-lethal mRNA, ... 82 5e-14
(Q12926) RecName: Full=ELAV-like protein 2; AltName: Full=Hu-ant... 82 5e-14
BC136134_1(BC136134|pid:none) Xenopus tropicalis ELAV (embryonic... 82 5e-14
AY016023_9(AY016023|pid:none) Sphoeroides nephelus alpha globin ... 82 6e-14
(Q60900) RecName: Full=ELAV-like protein 3; AltName: Full=Hu-ant... 82 6e-14
BT045701_1(BT045701|pid:none) Salmo salar clone ssal-rgf-529-045... 82 6e-14
EF384209_1(EF384209|pid:none) Platynereis dumerilii Elav mRNA, c... 82 8e-14
AF025689_1(AF025689|pid:none) Musca domestica clone MdSxlc1 Sex-... 82 8e-14
BC102495_1(BC102495|pid:none) Bos taurus ELAV (embryonic lethal,... 82 8e-14
AK089088_1(AK089088|pid:none) Mus musculus 2 days neonate thymus... 81 1e-13
(P70372) RecName: Full=ELAV-like protein 1; AltName: Full=Hu-ant... 81 1e-13
AF176673_1(AF176673|pid:none) Gallus gallus RNA-binding protein ... 81 1e-13
FN357324_7(FN357324|pid:none) Schistosoma mansoni genome sequenc... 81 1e-13
BT077985_1(BT077985|pid:none) Lepeophtheirus salmonis clone lsal... 80 2e-13
AF234183_1(AF234183|pid:none) Lucilia cuprina sex-lethal protein... 80 2e-13
AJ715415_1(AJ715415|pid:none) Bactrocera oleae mRNA for sex-leth... 80 3e-13
AF026145_1(AF026145|pid:none) Ceratitis capitata sex-lethal homo... 80 3e-13
AL583843_2(AL583843|pid:none) Human DNA sequence from clone RP11... 79 4e-13
AL627425_2(AL627425|pid:none) Mouse DNA sequence from clone RP23... 79 4e-13
AL627425_4(AL627425|pid:none) Mouse DNA sequence from clone RP23... 79 4e-13
(P26378) RecName: Full=ELAV-like protein 4; AltName: Full=Parane... 79 4e-13
AK298817_1(AK298817|pid:none) Homo sapiens cDNA FLJ51957 complet... 79 4e-13
AL583843_1(AL583843|pid:none) Human DNA sequence from clone RP11... 79 4e-13
AF176675_1(AF176675|pid:none) Gallus gallus RNA-binding protein ... 79 4e-13
AF041341_1(AF041341|pid:none) Mus musculus RNA binding protein E... 79 4e-13
AL583843_3(AL583843|pid:none) Human DNA sequence from clone RP11... 79 4e-13
BC036071_1(BC036071|pid:none) Homo sapiens ELAV (embryonic letha... 79 4e-13
(Q61701) RecName: Full=ELAV-like protein 4; AltName: Full=Parane... 79 4e-13
AK079088_1(AK079088|pid:none) Mus musculus adult male diencephal... 79 4e-13
AY036909_1(AY036909|pid:none) Homo sapiens HUC (ELAVL3) mRNA, co... 79 5e-13
BT034281_1(BT034281|pid:none) Zea mays full-length cDNA clone ZM... 79 5e-13
AX463223_1(AX463223|pid:none) Sequence 24 from Patent WO0249625.... 79 5e-13
BC065343_1(BC065343|pid:none) Danio rerio ELAV (embryonic lethal... 79 5e-13
BC099348_1(BC099348|pid:none) Xenopus laevis RNA-binding protein... 79 7e-13
CR761704_1(CR761704|pid:none) Xenopus tropicalis finished cDNA, ... 79 7e-13
I51678(I51678) ribonucleoprotein - African clawed frog &U17599_... 79 7e-13
AK014133_1(AK014133|pid:none) Mus musculus 13 days embryo head c... 79 7e-13
AB207268_1(AB207268|pid:none) Bombyx mori Sxl mRNA for sex-letha... 78 9e-13
AB050498_1(AB050498|pid:none) Gallus gallus etr-3 mRNA for elav-... 78 9e-13
DQ209268_1(DQ209268|pid:none) Bombyx mori sex-lethal isoform 1 (... 78 9e-13
AE014297_2127(AE014297|pid:none) Drosophila melanogaster chromos... 78 9e-13
X85111_1(X85111|pid:none) X.laevis mRNA for XEL-1. 78 9e-13
EF085266_1(EF085266|pid:none) Picea sitchensis clone WS02718_G07... 78 1e-12
AE014134_536(AE014134|pid:none) Drosophila melanogaster chromoso... 77 2e-12
BC086269_1(BC086269|pid:none) Xenopus laevis hypothetical LOC495... 77 2e-12
AK161667_1(AK161667|pid:none) Mus musculus 8 days embryo whole b... 77 2e-12
EF676928_1(EF676928|pid:none) Picea sitchensis clone WS02758_C10... 77 3e-12
AK103490_1(AK103490|pid:none) Oryza sativa Japonica Group cDNA c... 77 3e-12
AE014298_1040(AE014298|pid:none) Drosophila melanogaster chromos... 76 4e-12
BT003583_1(BT003583|pid:none) Drosophila melanogaster LD15933 fu... 76 4e-12
AE014298_1044(AE014298|pid:none) Drosophila melanogaster chromos... 76 4e-12
AE014298_1049(AE014298|pid:none) Drosophila melanogaster chromos... 76 4e-12
B39725(B39725) sex-lethal sex determination protein MS11 - fruit... 76 4e-12
AE014298_1041(AE014298|pid:none) Drosophila melanogaster chromos... 76 4e-12
AK126716_1(AK126716|pid:none) Homo sapiens cDNA FLJ44762 fis, cl... 76 5e-12
CR954212_4(CR954212|pid:none) Ostreococcus tauri strain OTTH0595... 75 6e-12
(Q24668) RecName: Full=Protein sex-lethal; 75 6e-12
L05109_1(L05109|pid:none) Drosophila melanogaster poly(A)-bindin... 75 8e-12
AE014134_533(AE014134|pid:none) Drosophila melanogaster chromoso... 75 8e-12
S30887(S30887)polyadenylate-binding protein - fruit fly (Drosoph... 75 8e-12
S55886_1(S55886|pid:none) Drosophila melanogaster RRM9 (rbp9) ge... 75 8e-12
AP005797_18(AP005797|pid:none) Oryza sativa Japonica Group genom... 75 1e-11
AY087856_1(AY087856|pid:none) Arabidopsis thaliana clone 38968 m... 75 1e-11
(P21187) RecName: Full=Polyadenylate-binding protein; S... 75 1e-11
AY035152_1(AY035152|pid:none) Arabidopsis thaliana putative spli... 75 1e-11
AC148486_19(AC148486|pid:none) Medicago truncatula clone mth2-56... 75 1e-11
FB912279_1(FB912279|pid:none) Sequence 131552 from Patent WO2008... 75 1e-11
AC006135_14(AC006135|pid:none) Arabidopsis thaliana chromosome 2... 75 1e-11
AP005797_17(AP005797|pid:none) Oryza sativa Japonica Group genom... 75 1e-11
AJ000546_1(AJ000546|pid:none) Megaselia scalaris mRNA for Sex-le... 74 1e-11
AF176674_1(AF176674|pid:none) Gallus gallus RNA-binding protein ... 74 1e-11
AB050497_1(AB050497|pid:none) Gallus gallus brul mRNA for bruno-... 74 1e-11
BT038475_1(BT038475|pid:none) Zea mays full-length cDNA clone ZM... 74 2e-11
AE014298_202(AE014298|pid:none) Drosophila melanogaster chromoso... 74 2e-11
CP001326_401(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 74 2e-11
EU955573_1(EU955573|pid:none) Zea mays clone 1537388 ribonucleop... 74 2e-11
AE014298_203(AE014298|pid:none) Drosophila melanogaster chromoso... 74 2e-11
FB912195_1(FB912195|pid:none) Sequence 131468 from Patent WO2008... 74 2e-11
AB050499_1(AB050499|pid:none) Mus musculus brul mRNA for bruno-l... 74 2e-11
BT033456_1(BT033456|pid:none) Zea mays full-length cDNA clone ZM... 74 2e-11
AF389431_1(AF389431|pid:none) Solanum tuberosum single-stranded ... 74 2e-11
A41732(A41732) heterogeneous ribonuclear particle protein hrp36 ... 73 3e-11
BT054576_1(BT054576|pid:none) Zea mays full-length cDNA clone ZM... 73 3e-11
X59691_1(X59691|pid:none) D.melanogaster gene for P11 protein, A... 73 3e-11
BT081408_1(BT081408|pid:none) Drosophila melanogaster MIP06224 f... 73 3e-11
X58183_1(X58183|pid:none) D.melanogaster gene for heteronuclear ... 73 3e-11
S22315(S22315;S65539;S13731) snRNP-associated protein P11 - frui... 73 3e-11
(P48810) RecName: Full=Heterogeneous nuclear ribonucleoprotein 8... 73 3e-11
BT035575_1(BT035575|pid:none) Zea mays full-length cDNA clone ZM... 73 4e-11
BC045264_1(BC045264|pid:none) Xenopus laevis splicing factor 3b,... 73 4e-11
AK070743_1(AK070743|pid:none) Oryza sativa Japonica Group cDNA c... 72 5e-11
(A2Q848) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 72 7e-11
S37085(S37085) polyadenylate-binding protein - fern (Anemia phyl... 72 7e-11
FJ830848_1(FJ830848|pid:none) Triticum aestivum cp31BHv mRNA, pa... 72 7e-11
EF576487_1(EF576487|pid:none) Oryza sativa (indica cultivar-grou... 72 9e-11
BC071591_1(BC071591|pid:none) Homo sapiens poly(A) binding prote... 72 9e-11
AL365277_14(AL365277|pid:none) Human DNA sequence from clone RP1... 72 9e-11
(Q13310) RecName: Full=Polyadenylate-binding protein 4; ... 72 9e-11
AK001239_1(AK001239|pid:none) Homo sapiens cDNA FLJ10377 fis, cl... 71 1e-10
(Q6AYL5) RecName: Full=Splicing factor 3B subunit 4; &(Q8QZY9) ... 71 1e-10
(Q9NW13) RecName: Full=RNA-binding protein 28; AltName: Full=RNA... 71 1e-10
BC056532_1(BC056532|pid:none) Danio rerio splicing factor 3b, su... 71 1e-10
FN357488_2(FN357488|pid:none) Schistosoma mansoni genome sequenc... 71 1e-10
CP000592_2(CP000592|pid:none) Ostreococcus lucimarinus CCE9901 c... 71 1e-10
(P31209) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 71 1e-10
FN314364_1(FN314364|pid:none) Schistosoma japonicum isolate Anhu... 71 1e-10
(P07909) RecName: Full=Heterogeneous nuclear ribonucleoprotein A... 71 1e-10
AE014297_4407(AE014297|pid:none) Drosophila melanogaster chromos... 71 1e-10
DQ646407_1(DQ646407|pid:none) Bombyx mori poly A binding protein... 71 1e-10
DQ336954_2(DQ336954|pid:none) Glycine max cultivar Williams 82 c... 71 1e-10
BC061357_1(BC061357|pid:none) Xenopus tropicalis splicing factor... 71 1e-10
AE014297_4411(AE014297|pid:none) Drosophila melanogaster chromos... 71 1e-10
AP004339_10(AP004339|pid:none) Oryza sativa Japonica Group genom... 71 1e-10
AF190655_1(AF190655|pid:none) Nicotiana tabacum poly(A)-binding ... 71 1e-10
AJ719757_1(AJ719757|pid:none) Gallus gallus mRNA for hypothetica... 71 1e-10
(P49313) RecName: Full=30 kDa ribonucleoprotein, chloroplastic; ... 71 1e-10
CR940348_585(CR940348|pid:none) Theileria annulata strain Ankara... 71 1e-10
(P04147) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 71 1e-10
BC003283_1(BC003283|pid:none) Mus musculus poly(A) binding prote... 70 2e-10
AL032631_5(AL032631|pid:none) Caenorhabditis elegans YAC Y106G6H... 70 2e-10
AL606917_1(AL606917|pid:none) Mouse DNA sequence from clone RP23... 70 2e-10
AK135962_1(AK135962|pid:none) Mus musculus in vitro fertilized e... 70 2e-10
AL606917_2(AL606917|pid:none) Mouse DNA sequence from clone RP23... 70 2e-10
EU972185_1(EU972185|pid:none) Zea mays clone 377000 polyadenylat... 70 2e-10
AL606917_4(AL606917|pid:none) Mouse DNA sequence from clone RP23... 70 2e-10
BC116459_1(BC116459|pid:none) Xenopus laevis ribonucleoprotein, ... 70 2e-10
EF677394_1(EF677394|pid:none) Picea sitchensis clone WS02768_B11... 70 3e-10
AC136449_14(AC136449|pid:none) Medicago truncatula clone mth2-11... 70 3e-10
M64603_1(M64603|pid:none) Schizosaccharomyces pombe poly(A)-bind... 70 3e-10
EF147288_1(EF147288|pid:none) Populus trichocarpa clone WS0122_E... 70 3e-10
AM447494_2(AM447494|pid:none) Vitis vinifera contig VV78X024983.... 70 3e-10
AY956294_1(AY956294|pid:none) Aplysia californica ELAV 2-like pr... 70 3e-10
AF248649_1(AF248649|pid:none) Homo sapiens RNA-binding protein B... 55 4e-10
U70731_1(U70731|pid:none) Emericella nidulans putative poly(A)-b... 69 4e-10
AK223322_1(AK223322|pid:none) Homo sapiens mRNA for splicing fac... 69 4e-10
AY099515_1(AY099515|pid:none) Danio rerio splicing factor 3b sub... 69 4e-10
AP006062_18(AP006062|pid:none) Oryza sativa Japonica Group genom... 69 4e-10
(Q4VXU2) RecName: Full=Polyadenylate-binding protein 1-like; &A... 69 6e-10
EU042108_1(EU042108|pid:none) Epinephelus coioides Hnrpa01 prote... 69 6e-10
BT053933_1(BT053933|pid:none) Zea mays full-length cDNA clone ZM... 69 6e-10
(Q32P51) RecName: Full=Heterogeneous nuclear ribonucleoprotein A... 69 6e-10
BC168959_1(BC168959|pid:none) Rattus norvegicus poly(A) binding ... 69 6e-10
AF349964_1(AF349964|pid:none) Daucus carota poly(A)-binding prot... 69 6e-10
AL032631_3(AL032631|pid:none) Caenorhabditis elegans YAC Y106G6H... 69 7e-10
AY048286_1(AY048286|pid:none) Arabidopsis thaliana AT4g36960/C7A... 69 7e-10
(Q2UK72) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 69 7e-10
BC066672_1(BC066672|pid:none) Danio rerio zgc:77366, mRNA (cDNA ... 69 7e-10
BX004991_3(BX004991|pid:none) Zebrafish DNA sequence from clone ... 69 7e-10
EF082899_1(EF082899|pid:none) Picea sitchensis clone WS0279_B19 ... 69 7e-10
EF087603_1(EF087603|pid:none) Picea sitchensis clone WS02729_L07... 69 7e-10
BC167360_1(BC167360|pid:none) Xenopus tropicalis RNA binding mot... 69 7e-10
DQ344977_1(DQ344977|pid:none) Schmidtea mediterranea bruno-like ... 54 9e-10
(P29341) RecName: Full=Polyadenylate-binding protein 1; ... 68 1e-09
AK067210_1(AK067210|pid:none) Oryza sativa Japonica Group cDNA c... 68 1e-09
(Q5R8F7) RecName: Full=Polyadenylate-binding protein 1; ... 68 1e-09
S52491(S52491) polyadenylate binding protein II - human &Z48501... 68 1e-09
(P11940) RecName: Full=Polyadenylate-binding protein 1; ... 68 1e-09
(Q9EPH8) RecName: Full=Polyadenylate-binding protein 1; ... 68 1e-09
AK089747_1(AK089747|pid:none) Mus musculus activated spleen cDNA... 68 1e-09
CR860292_1(CR860292|pid:none) Pongo abelii mRNA; cDNA DKFZp459D2... 68 1e-09
BC106632_1(BC106632|pid:none) Xenopus laevis ribonucleoprotein, ... 68 1e-09
(P51990) RecName: Full=Heterogeneous nuclear ribonucleoprotein A... 68 1e-09
AK297327_1(AK297327|pid:none) Homo sapiens cDNA FLJ51677 complet... 68 1e-09
AC122728_12(AC122728|pid:none) Medicago truncatula clone mth2-22... 68 1e-09
(P60047) RecName: Full=Polyadenylate-binding protein 5; ... 68 1e-09
AL122118_1(AL122118|pid:none) Homo sapiens mRNA; cDNA DKFZp434O1... 68 1e-09
AE014298_1908(AE014298|pid:none) Drosophila melanogaster chromos... 68 1e-09
AJ719881_1(AJ719881|pid:none) Gallus gallus mRNA for hypothetica... 68 1e-09
BT053136_1(BT053136|pid:none) Medicago truncatula clone MTYFL_FM... 68 1e-09
EU960096_1(EU960096|pid:none) Zea mays clone 221668 ribonucleopr... 67 2e-09
EF082620_1(EF082620|pid:none) Picea sitchensis clone WS0287_G23 ... 67 2e-09
BT053782_1(BT053782|pid:none) Zea mays full-length cDNA clone ZM... 67 2e-09
AY223431_1(AY223431|pid:none) Schistosoma japonicum clone ZZZ405... 67 2e-09
(Q0U1G2) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 67 2e-09
BC059662_1(BC059662|pid:none) Danio rerio poly A binding protein... 67 2e-09
FB912267_1(FB912267|pid:none) Sequence 131540 from Patent WO2008... 67 2e-09
AK131715_1(AK131715|pid:none) Mus musculus adult male testis cDN... 67 2e-09
CP000585_410(CP000585|pid:none) Ostreococcus lucimarinus CCE9901... 67 2e-09
D31715_1(D31715|pid:none) Arabidopsis thaliana gene for RNA-bind... 67 2e-09
AC084766_7(AC084766|pid:none) Oryza sativa chromosome 3 BAC OSJN... 67 2e-09
DQ443319_1(DQ443319|pid:none) Bombyx mori heterogeneous nuclear ... 67 2e-09
FN357508_16(FN357508|pid:none) Schistosoma mansoni genome sequen... 67 2e-09
BC051134_1(BC051134|pid:none) Mus musculus poly(A) binding prote... 67 2e-09
DQ440228_1(DQ440228|pid:none) Aedes aegypti clone AET-265 polyad... 67 2e-09
CR942663_2(CR942663|pid:none) Xenopus tropicalis finished cDNA, ... 67 2e-09
AY360385_9(AY360385|pid:none) Oryza sativa (japonica cultivar-gr... 67 2e-09
FB912199_1(FB912199|pid:none) Sequence 131472 from Patent WO2008... 67 2e-09
CR954209_116(CR954209|pid:none) Ostreococcus tauri strain OTTH05... 67 2e-09
BT047843_1(BT047843|pid:none) Salmo salar clone ssal-eve-537-259... 67 2e-09
DQ120646_1(DQ120646|pid:none) Aotus trivirgatus PABP3 gene, part... 67 2e-09
AB023046_18(AB023046|pid:none) Arabidopsis thaliana genomic DNA,... 67 2e-09
(A1D4K4) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 67 2e-09
DQ120643_1(DQ120643|pid:none) Pongo pygmaeus PABP3 gene, partial... 67 2e-09
BC076931_1(BC076931|pid:none) Xenopus tropicalis polyadenylate-b... 67 2e-09
AJ719821_1(AJ719821|pid:none) Gallus gallus mRNA for hypothetica... 67 2e-09
AY062455_1(AY062455|pid:none) Arabidopsis thaliana ubiquitin / r... 67 2e-09
FN392320_99(FN392320|pid:none) Pichia pastoris GS115 chromosome ... 67 2e-09
AJ416631_1(AJ416631|pid:none) Xenopus laevis partial mRNA for TI... 67 3e-09
AL844509_593(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 67 3e-09
(Q9H361) RecName: Full=Polyadenylate-binding protein 3; ... 67 3e-09
DQ120640_1(DQ120640|pid:none) Homo sapiens PABP3 gene, partial c... 67 3e-09
AF240679_1(AF240679|pid:none) Cucumis sativus poly(A)-binding pr... 67 3e-09
CR380959_163(CR380959|pid:none) Candida glabrata strain CBS138 c... 67 3e-09
DQ120644_1(DQ120644|pid:none) Hylobates lar PABP3 gene, partial ... 67 3e-09
AF132026_1(AF132026|pid:none) Homo sapiens testis-specific poly(... 67 3e-09
CP001330_310(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 66 4e-09
X57483_1(X57483|pid:none) X.laevis variant mRNA (X ABP 12-5) for... 66 4e-09
FN357347_16(FN357347|pid:none) Schistosoma mansoni genome sequen... 66 4e-09
(Q9TTV2) RecName: Full=Heterogeneous nuclear ribonucleoproteins ... 66 4e-09
(A1CRM1) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 66 4e-09
AL136900_1(AL136900|pid:none) Homo sapiens mRNA; cDNA DKFZp434M1... 66 4e-09
BC145588_1(BC145588|pid:none) Mus musculus heterogeneous nuclear... 66 4e-09
(O94432) RecName: Full=Uncharacterized RNA-binding protein C660.... 66 4e-09
(Q5KBW2) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 66 4e-09
CR762263_1(CR762263|pid:none) Xenopus tropicalis finished cDNA, ... 66 4e-09
U28944_7(U28944|pid:none) Caenorhabditis elegans cosmid C18A3, c... 66 5e-09
EU970290_1(EU970290|pid:none) Zea mays clone 343126 unknown mRNA. 66 5e-09
CP000502_45(CP000502|pid:none) Pichia stipitis CBS 6054 chromoso... 66 5e-09
AK013047_1(AK013047|pid:none) Mus musculus 10, 11 days embryo wh... 66 5e-09
BT063107_1(BT063107|pid:none) Zea mays full-length cDNA clone ZM... 66 5e-09
T15542(T15542)hypothetical protein C18A3.5 - Caenorhabditis eleg... 66 5e-09
CR380951_131(CR380951|pid:none) Candida glabrata strain CBS138 c... 66 5e-09
AK069121_1(AK069121|pid:none) Oryza sativa Japonica Group cDNA c... 66 5e-09
EF676187_1(EF676187|pid:none) Picea sitchensis clone WS02717_O03... 66 5e-09
AK156773_1(AK156773|pid:none) Mus musculus activated spleen cDNA... 66 5e-09
CU633895_170(CU633895|pid:none) Podospora anserina genomic DNA c... 66 5e-09
U28944_4(U28944|pid:none) Caenorhabditis elegans cosmid C18A3, c... 66 5e-09
AK099630_1(AK099630|pid:none) Oryza sativa Japonica Group cDNA c... 66 5e-09
AJ720206_1(AJ720206|pid:none) Gallus gallus mRNA for hypothetica... 66 5e-09
(Q5RBU8) RecName: Full=Heterogeneous nuclear ribonucleoproteins ... 66 5e-09
AK124858_1(AK124858|pid:none) Homo sapiens cDNA FLJ42868 fis, cl... 64 6e-09
AF406651_1(AF406651|pid:none) Mus musculus heterogeneous nuclear... 65 6e-09
BC053126_1(BC053126|pid:none) Danio rerio poly(A) binding protei... 65 6e-09
AC003979_7(AC003979|pid:none) Arabidopsis thaliana chromosome 1 ... 65 6e-09
AF293840_1(AF293840|pid:none) Arabidopsis thaliana poly(A) bindi... 65 6e-09
(Q2HJ60) RecName: Full=Heterogeneous nuclear ribonucleoproteins ... 65 6e-09
(Q1DXH0) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 65 6e-09
AK289429_1(AK289429|pid:none) Homo sapiens cDNA FLJ75945 complet... 65 6e-09
(P19682) RecName: Full=28 kDa ribonucleoprotein, chloroplastic; ... 65 6e-09
(P22626) RecName: Full=Heterogeneous nuclear ribonucleoproteins ... 65 6e-09
(O88569) RecName: Full=Heterogeneous nuclear ribonucleoproteins ... 65 6e-09
(P19683) RecName: Full=31 kDa ribonucleoprotein, chloroplastic; ... 65 6e-09
AB006818_1(AB006818|pid:none) Rattus norvegicus hnRNP mRNA for h... 65 8e-09
AL451015_4(AL451015|pid:none) Neurospora crassa DNA linkage grou... 65 8e-09
AM910989_140(AM910989|pid:none) Plasmodium knowlesi strain H chr... 65 8e-09
FN357339_19(FN357339|pid:none) Schistosoma mansoni genome sequen... 65 8e-09
(P21522) RecName: Full=Heterogeneous nuclear ribonucleoprotein A... 65 8e-09
CR382131_630(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 65 8e-09
DQ120645_1(DQ120645|pid:none) Cercopithecus sabaeus PABP3 gene, ... 65 8e-09
(A7VJC2) RecName: Full=Heterogeneous nuclear ribonucleoproteins ... 65 8e-09
AB006817_1(AB006817|pid:none) Rattus norvegicus hnRNP mRNA for h... 65 8e-09
AC148528_1(AC148528|pid:none) Medicago truncatula clone mth2-53h... 65 8e-09
D38485_1(D38485|pid:none) Triticum aestivum mRNA for Ps16 protei... 65 8e-09
D12799_1(D12799|pid:none) Homo sapiens mRNA for polyadenylate bi... 65 8e-09
AF411956_7(AF411956|pid:none) Takifugu rubripes lck gene locus, ... 65 1e-08
Z78536_2(Z78536|pid:none) Caenorhabditis elegans Cosmid C07A4, c... 65 1e-08
AC002391_1(AC002391|pid:none) Arabidopsis thaliana chromosome 2 ... 65 1e-08
BC066434_1(BC066434|pid:none) Danio rerio heterogeneous nuclear ... 65 1e-08
DNXLPA(A32323;S12000) polyadenylate-binding protein - African cl... 65 1e-08
(Q2GSX8) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 65 1e-08
AK248078_1(AK248078|pid:none) Dugesia japonica mRNA for polyaden... 65 1e-08
AB073375_1(AB073375|pid:none) Ciona savignyi mRNA for Cs-ETR1, p... 50 1e-08
U80746_1(U80746|pid:none) Homo sapiens CAGH4 mRNA, partial cds. 48 1e-08
AK298852_1(AK298852|pid:none) Homo sapiens cDNA FLJ51939 complet... 48 1e-08
AM910993_99(AM910993|pid:none) Plasmodium knowlesi strain H chro... 64 1e-08
BT025832_1(BT025832|pid:none) Drosophila melanogaster IP09238 fu... 64 1e-08
FB912277_1(FB912277|pid:none) Sequence 131550 from Patent WO2008... 64 1e-08
CR940347_345(CR940347|pid:none) Theileria annulata strain Ankara... 64 1e-08
AK146630_1(AK146630|pid:none) Mus musculus 17 days embryo kidney... 64 1e-08
BT044656_1(BT044656|pid:none) Salmo salar clone ssal-rgf-002-074... 64 1e-08
FB912193_1(FB912193|pid:none) Sequence 131466 from Patent WO2008... 64 1e-08
BC062235_1(BC062235|pid:none) Rattus norvegicus heterogeneous nu... 64 1e-08
AB170166_1(AB170166|pid:none) Macaca fascicularis brain cDNA clo... 64 1e-08
(P09651) RecName: Full=Heterogeneous nuclear ribonucleoprotein A... 64 1e-08
(P0C7M2) RecName: Full=Putative heterogeneous nuclear ribonucleo... 64 1e-08
AK169216_1(AK169216|pid:none) Mus musculus 16 days embryo kidney... 64 1e-08
CR855235_3(CR855235|pid:none) Oryza sativa genomic DNA, chromoso... 64 1e-08
AE014297_4382(AE014297|pid:none) Drosophila melanogaster chromos... 64 1e-08
FJ502080_1(FJ502080|pid:none) Aristichthys nobilis clone B26 pol... 64 1e-08
(A4QUF0) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 64 2e-08
AC148756_6(AC148756|pid:none) Medicago truncatula clone mth2-22d... 64 2e-08
EU956408_1(EU956408|pid:none) Zea mays clone 1562489 plastid-spe... 64 2e-08
BT077518_1(BT077518|pid:none) Lepeophtheirus salmonis clone lsal... 64 2e-08
FB912189_1(FB912189|pid:none) Sequence 131462 from Patent WO2008... 64 2e-08
AJ421781_1(AJ421781|pid:none) Persea americana chloroplast mRNA ... 64 2e-08
S02061(S02061) heterogeneous ribonuclear particle protein A1.bet... 64 2e-08
BT052605_1(BT052605|pid:none) Medicago truncatula clone MTYFD_FE... 64 2e-08
BC084798_1(BC084798|pid:none) Xenopus laevis hypothetical LOC495... 64 2e-08
A40252(A40252)elav protein - fruit fly (Drosophila virilis) 64 2e-08
BT075703_1(BT075703|pid:none) Osmerus mordax clone omor-rgc-503-... 64 2e-08
AY854826_1(AY854826|pid:none) Drosophila americana strain FP99.2... 64 2e-08
(Q22037) RecName: Full=Heterogeneous nuclear ribonucleoprotein A... 64 2e-08
EF635076_1(EF635076|pid:none) Drosophila littoralis strain Kemi9... 64 2e-08
EF188910_1(EF188910|pid:none) Drosophila recens strain NH_ST_6 e... 64 2e-08
AY854860_1(AY854860|pid:none) Drosophila americana strain OR01.4... 64 2e-08
EF188911_1(EF188911|pid:none) Drosophila recens strain NH_ST_7 e... 64 2e-08
EF188917_1(EF188917|pid:none) Drosophila recens strain NY_ST_14 ... 64 2e-08
EF188903_1(EF188903|pid:none) Drosophila recens strain MI_ST_6 e... 64 2e-08
CR382123_558(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 64 2e-08
AY854839_1(AY854839|pid:none) Drosophila americana strain FP99.5... 64 2e-08
EF188894_1(EF188894|pid:none) Drosophila recens strain MN_ST_3 e... 64 2e-08
AM910994_313(AM910994|pid:none) Plasmodium knowlesi strain H chr... 64 2e-08
AC005966_5(AC005966|pid:none) Arabidopsis thaliana chromosome 1 ... 64 2e-08
EF188893_1(EF188893|pid:none) Drosophila recens strain MN_ST_2 e... 64 2e-08
EF188935_1(EF188935|pid:none) Drosophila subquinaria elav (elav)... 64 2e-08
BC065334_1(BC065334|pid:none) Danio rerio heterogeneous nuclear ... 64 2e-08
AK248132_1(AK248132|pid:none) Dugesia japonica mRNA for hnRNP A2... 64 2e-08
AP003687_23(AP003687|pid:none) Oryza sativa Japonica Group genom... 64 2e-08
EF635077_1(EF635077|pid:none) Drosophila montana strain Kemi96 e... 64 2e-08
EF188916_1(EF188916|pid:none) Drosophila recens strain NY_ST_13 ... 64 2e-08
BT045697_1(BT045697|pid:none) Salmo salar clone ssal-rgf-529-021... 64 2e-08
EF188892_1(EF188892|pid:none) Drosophila recens strain MN_ST_1 e... 64 2e-08
AM910987_183(AM910987|pid:none) Plasmodium knowlesi strain H chr... 64 2e-08
AP008207_3648(AP008207|pid:none) Oryza sativa (japonica cultivar... 64 2e-08
BC099992_1(BC099992|pid:none) Danio rerio poly A binding protein... 64 2e-08
CP000081_499(CP000081|pid:none) Leishmania major chromosome 35, ... 64 2e-08
AY854856_1(AY854856|pid:none) Drosophila americana strain OR01.1... 64 2e-08
AF038613_6(AF038613|pid:none) Caenorhabditis elegans cosmid F42A... 64 2e-08
AM502253_532(AM502253|pid:none) Leishmania infantum chromosome 35. 64 2e-08
EF188900_1(EF188900|pid:none) Drosophila recens strain MI_ST_14 ... 64 2e-08
(Q05196) RecName: Full=Polyadenylate-binding protein 5; ... 63 3e-08
>AC005275_3(AC005275|pid:none) Arabidopsis thaliana BAC F4C21 from
chromosome IV, top arm, near 17 cM, complete sequence.
&AF069442_1(AF069442|pid:none)
&AL161496_5(AL161496|pid:none) &T01382(T01382)
Length = 492
Score = 148 bits (374), Expect = 6e-34
Identities = 72/177 (40%), Positives = 114/177 (64%), Gaps = 1/177 (0%)
Frame = +2
Query: 425 VFVGHIPSSMNEEGVSQIFNKFGXILDITMXKDKRTNVSKGCAFITFSTKEEADNALNTT 604
+FVG IP M+E + +F +F + ++ + KDK T S+GC F+ ++EEAD +N
Sbjct: 20 LFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVNAC 79
Query: 605 NESGTFLENMNKPLQVKYSDNEIEKMERKLFIGMLGTS-DEDQIRILFGNYGIIEDLNIV 781
+ T L N LQVKY+D E+E++E KLF+GML + E +++ LF YG I+DL I+
Sbjct: 80 HNKKT-LPGANSLLQVKYADGELERLEHKLFVGMLPKNVSEAEVQSLFSKYGTIKDLQIL 138
Query: 782 REKDGKPKGYGFIKYSTRDESENALREIDGKHTLPGSNLPIIVKFADTERQKRKKLL 952
R KG F+KY T++++ +A+ I+GKH + GS +P++VK+ADTER++ + L
Sbjct: 139 RGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWADTERERHTRRL 195
Score = 42.4 bits (98), Expect(2) = 2e-06
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +3
Query: 1221 ESNDLFIYYLPFTYGDEELKQLFAPYGNVISSKVFIDR 1334
E +LFIY +P +GD+EL F +G V+S+KVF+D+
Sbjct: 347 EGANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDK 384
Score = 34.7 bits (78), Expect(2) = 2e-06
Identities = 24/46 (52%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = +1
Query: 1339 TQQSKCFGFVSYDN---TQSAI-CCNSRIKWSCYAKGKKLKVNFKR 1464
T SKCFGFVSYD+ Q+AI N R + GKKLKV KR
Sbjct: 386 TGVSKCFGFVSYDSQAAAQNAIDMMNGR-----HLGGKKLKVQLKR 426
Score = 46.6 bits (109), Expect = 0.003
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +2
Query: 416 GFTVFVGHIPSSMNEEGVSQIFNKFGXILDITMXKDKRTNVSKGCAFITFSTKEEADNAL 595
G +F+ +IP ++ ++ F FG +L + DK T VSK F+++ ++ A NA+
Sbjct: 348 GANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAI 407
Query: 596 NTTNESGTFLENMNKPLQVKYSDN--EIEKMERKL 694
+ N G L +Q+K N + K RK+
Sbjct: 408 DMMN--GRHLGGKKLKVQLKRDSNNGQPSKFRRKI 440
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,906,324,529
Number of extensions: 30572408
Number of successful extensions: 73945
Number of sequences better than 10.0: 3045
Number of HSP's gapped: 71926
Number of HSP's successfully gapped: 5188
Length of query: 600
Length of database: 1,040,966,779
Length adjustment: 134
Effective length of query: 466
Effective length of database: 611,592,589
Effective search space: 285002146474
Effective search space used: 285002146474
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
2 |
| VH (FL, L) |
0 |
| VF (FL, S) |
11 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
2 |
| SS (DIR, S) |
2 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |