Contig-U01592-1
Contig ID Contig-U01592-1
Contig update 2001. 8.29
Contig sequence
>Contig-U01592-1 (Contig-U01592-1Q) /CSM_Contig/Contig-U01592-1Q.Seq.d
ATAAAATTTATAAATTTTTTTTTTTTTTTTTTTTAATATAAACTTTTTTA
ATTAAATGTACGGATACGGATATACACCAGCAGTTGTAGCACCAACAGTC
ATGTCATTCTCATTTGTCCCACCTCAAGCATTCCAACAATGTTGGTTTTA
CTCATTATACACTCAAATTCAACAAGCTCAATTATATGAAATGCAATCTT
GGTTTATGAGAGTTGATGCAAATCGTAGCGGAACAATTAGCAGTGGTGAA
TTACAATATTTAAATATTGGTGGCACTCCTCTTGGTATTGAAACAGCTAC
TAAATTAATTAAAGTTTTTGATCATAATAAAAATGGTCAAATTGATTTCT
ATGAATATGCAGCACTTCATCAATTTATCAATAACCTTTACAGATGTTTT
GTTGCCAAATGATCGGTAATTTCAGTGGTACCATTGATGCAAATGAAATT
TATAATGCACTCATTACAAGTGGATTCCAATTACCATTCCCAACTGTTAA
CTACCTTTTCTTAAAGTTATCCCCAAGTGGTTATGGCCTTTTATTCACTC
AATTCTTAAATTTATGTGCAACCGTCGCTTTAACTCGTTCATTATTTGAA
TGGAATGATCCAATGAGAACCTGGTGTAGTCCATTTAAATTTAGCTCAAC
TTTATGATATCATTGCTTTAGTTTAAATAATTAATAATAATAAATTAAAT
AAAATGTTGTTGTAATCATAAATAAAAAAAAAAAAAATAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAA----------GTCCNTTTTAATTTGGC
TCCCCTTTTTGGTTTCNTTGCTTTGGTTTTATTTTTTTTTTTTTTTTATT
TAAATGTTGTTGTTATCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA

Gap gap included
Contig length 948
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 2976820
End point 2977709
Strand (PLUS/MINUS) PLUS
Number of clones 5
Number of EST 6
Link to clone list U01592
List of clone(s)

est1=SSB886E,1,742
est2=SSC304F,11,527
est3=VSI696F,67,461
est4=VSD203E,177,727
est5=VSB303Z,275,767
est6=SSC304Z,775,950
Translated Amino Acid sequence
ikfinffffff*yklf*lnvririytsscstnshvilicptssiptmlvlliihsnstss
ii*nailvyes*cks*rnn*qw*itifkywwhsswy*nsy*in*sf*s**kwsn*fl*ic
stssiyq*plqmfccqmignfsgtidaneiynalitsgfqlpfptvnylflklspsgygl
lftqflnlcatvaltrslfewndpmrtwcspfkfsstl*yhcfslnn****ik*NVVVII
NKKKKNKKKKKKKKKKK---

---VXFNLAPLFGFXALVLFFFFFYLNVVVIFKKKKKKKKKKKKKKKKKKKKKKKKKKKK
K


Translated Amino Acid sequence (All Frames)
Frame A:
ikfinffffff*yklf*lnvririytsscstnshvilicptssiptmlvlliihsnstss
ii*nailvyes*cks*rnn*qw*itifkywwhsswy*nsy*in*sf*s**kwsn*fl*ic
stssiyq*plqmfccqmignfsgtidaneiynalitsgfqlpfptvnylflklspsgygl
lftqflnlcatvaltrslfewndpmrtwcspfkfsstl*yhcfslnn****ik*NVVVII
NKKKKNKKKKKKKKKKK---

---VXFNLAPLFGFXALVLFFFFFYLNVVVIFKKKKKKKKKKKKKKKKKKKKKKKKKKKK
K

Frame B:
*nl*iffffffninffn*mygygytpavvaptvmsfsfvppqafqqcwfyslytqiqqaq
lyemqswfmrvdanrsgtissgelqylniggtplgietatklikvfdhnkngqidfyeya
alhqfinnlyrcfvak*svisvvplmqmkfimhslqvdsnyhsqllttfs*sypqvvmaf
yslns*iyvqpsl*lvhylngmiq*epgvvhlnlaqlydiialv*iinnnklnkmll*s*
ikkkkikkkkkkkkkkk---

---sxliwlpflvsllwfyfffffi*mlllslkkkkkkkkkkkkkkkkkkkkkkkkkkkk
k

Frame C:
kiykffffffli*tflikctdtdihqql*hqqschshlshlkhsnnvgfthytlkfnkln
ymkcnlgl*elmqivaeqlavvnyni*ilvalllvlkqlln*lkfliiikmvklismnmq
hfinlsitftdvllpndr*fqwyh*ck*nl*cthykwipitipnc*lpflkvipkwlwpf
ihsilkfmcnrrfnsfii*me*snenlv*si*i*lnfmisll*fk*liiin*ikcccnhk
*kkkk*kkkkkkkkkkk---

---pf*fgspfwfxcfgfifffflfkcccyl*kkkkkkkkkkkkkkkkkkkkkkkkkkkk

own update 2004. 6. 7
Homology vs CSM-cDNA
Query= Contig-U01592-1 (Contig-U01592-1Q)
/CSM_Contig/Contig-U01592-1Q.Seq.d
(958 letters)

Database: CSM
8361 sequences; 7,895,291 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U01592-1 (Contig-U01592-1Q) /CSM_Contig/Conti... 1265 0.0
Contig-U04437-1 (Contig-U04437-1Q) /CSM_Contig/Conti... 74 4e-13
Contig-U14035-1 (Contig-U14035-1Q) /CSM_Contig/Conti... 36 0.094
Contig-U10975-1 (Contig-U10975-1Q) /CSM_Contig/Conti... 36 0.094
Contig-U09715-1 (Contig-U09715-1Q) /CSM_Contig/Conti... 36 0.094
Contig-U14468-1 (Contig-U14468-1Q) /CSM_Contig/Conti... 34 0.37
Contig-U13269-1 (Contig-U13269-1Q) /CSM_Contig/Conti... 34 0.37
Contig-U10787-1 (Contig-U10787-1Q) /CSM_Contig/Conti... 34 0.37
Contig-U04734-1 (Contig-U04734-1Q) /CSM_Contig/Conti... 34 0.37
Contig-U14844-1 (Contig-U14844-1Q) /CSM_Contig/Conti... 32 1.5

>Contig-U01592-1 (Contig-U01592-1Q) /CSM_Contig/Contig-U01592-1Q.Seq.d
Length = 958

Score = 1265 bits (638), Expect = 0.0
Identities = 638/638 (100%)
Strand = Plus / Plus


Query: 35 aatataaacttttttaattaaatgtacggatacggatatacaccagcagttgtagcacca 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 aatataaacttttttaattaaatgtacggatacggatatacaccagcagttgtagcacca 94


Query: 95 acagtcatgtcattctcatttgtcccacctcaagcattccaacaatgttggttttactca 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 acagtcatgtcattctcatttgtcccacctcaagcattccaacaatgttggttttactca 154


Query: 155 ttatacactcaaattcaacaagctcaattatatgaaatgcaatcttggtttatgagagtt 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 ttatacactcaaattcaacaagctcaattatatgaaatgcaatcttggtttatgagagtt 214


Query: 215 gatgcaaatcgtagcggaacaattagcagtggtgaattacaatatttaaatattggtggc 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gatgcaaatcgtagcggaacaattagcagtggtgaattacaatatttaaatattggtggc 274


Query: 275 actcctcttggtattgaaacagctactaaattaattaaagtttttgatcataataaaaat 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 actcctcttggtattgaaacagctactaaattaattaaagtttttgatcataataaaaat 334


Query: 335 ggtcaaattgatttctatgaatatgcagcacttcatcaatttatcaataacctttacaga 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ggtcaaattgatttctatgaatatgcagcacttcatcaatttatcaataacctttacaga 394


Query: 395 tgttttgttgccaaatgatcggtaatttcagtggtaccattgatgcaaatgaaatttata 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tgttttgttgccaaatgatcggtaatttcagtggtaccattgatgcaaatgaaatttata 454


Query: 455 atgcactcattacaagtggattccaattaccattcccaactgttaactaccttttcttaa 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 atgcactcattacaagtggattccaattaccattcccaactgttaactaccttttcttaa 514


Query: 515 agttatccccaagtggttatggccttttattcactcaattcttaaatttatgtgcaaccg 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 agttatccccaagtggttatggccttttattcactcaattcttaaatttatgtgcaaccg 574


Query: 575 tcgctttaactcgttcattatttgaatggaatgatccaatgagaacctggtgtagtccat 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tcgctttaactcgttcattatttgaatggaatgatccaatgagaacctggtgtagtccat 634


Query: 635 ttaaatttagctcaactttatgatatcattgctttagt 672
||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ttaaatttagctcaactttatgatatcattgctttagt 672


Score = 83.8 bits (42), Expect = 4e-16
Identities = 48/48 (100%)
Strand = Plus / Plus


Query: 784 gtccnttttaatttggctcccctttttggtttcnttgctttggtttta 831
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 gtccnttttaatttggctcccctttttggtttcnttgctttggtttta 831


Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 848 atttaaatgttgttgttatcttt 870
|||||||||||||||||||||||
Sbjct: 848 atttaaatgttgttgttatcttt 870


Score = 38.2 bits (19), Expect = 0.024
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 705 tgttgttgtaatcataaat 723
|||||||||||||||||||
Sbjct: 705 tgttgttgtaatcataaat 723


Score = 32.2 bits (16), Expect = 1.5
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 254 caatatttaaatattg 269
||||||||||||||||
Sbjct: 269 caatatttaaatattg 254


>Contig-U04437-1 (Contig-U04437-1Q) /CSM_Contig/Contig-U04437-1Q.Seq.d
Length = 750

Score = 73.8 bits (37), Expect = 4e-13
Identities = 86/101 (85%), Gaps = 1/101 (0%)
Strand = Plus / Plus


Query: 284 ggtattgaaacagctacta-aattaattaaagtttttgatcataataaaaatggtcaaat 342
||||||||||||||||| ||||||||| ||| |||||| | |||| | |||||||||
Sbjct: 266 ggtattgaaacagctacagtaattaattagagtatttgatgttgataagagtggtcaaat 325


Query: 343 tgatttctatgaatatgcagcacttcatcaatttatcaata 383
|||||| ||||||||||| ||| | ||||||||||| ||||
Sbjct: 326 tgatttttatgaatatgctgcattgcatcaatttattaata 366


>Contig-U14035-1 (Contig-U14035-1Q) /CSM_Contig/Contig-U14035-1Q.Seq.d
Length = 1003

Score = 36.2 bits (18), Expect = 0.094
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 250 attacaatatttaaatat 267
||||||||||||||||||
Sbjct: 113 attacaatatttaaatat 130


Database: CSM
Posted date: Jun 7, 2004 8:33 AM
Number of letters in database: 7,895,291
Number of sequences in database: 8361

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,450
Number of Sequences: 8361
Number of extensions: 15450
Number of successful extensions: 1579
Number of sequences better than 10.0: 137
length of query: 958
length of database: 7,895,291
effective HSP length: 16
effective length of query: 942
effective length of database: 7,761,515
effective search space: 7311347130
effective search space used: 7311347130
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 5. 3
Homology vs DNA
Query= Contig-U01592-1 (Contig-U01592-1Q) /CSM_Contig/Contig-U01592-1Q.Seq.d
(958 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AB056714) Dictyostelium discoideum DdPEF-2 mRNA for penta-E... 741 0.0 4
(AF358912) Dictyostelium discoideum apoptosis-linked gene 2 ... 700 0.0 3
(AF358914) Dictyostelium discoideum apoptosis-linked gene 2 ... 482 0.0 4
(AU263641) Dictyostelium discoideum vegetative cDNA clone:VS... 511 0.0 2
(AU263642) Dictyostelium discoideum vegetative cDNA clone:VS... 406 0.0 4
(AU269099) Dictyostelium discoideum vegetative cDNA clone:VS... 670 0.0 2
(AU261940) Dictyostelium discoideum vegetative cDNA clone:VS... 406 0.0 3
(AU036967) Dictyostelium discoideum slug cDNA, clone SSB886. 430 e-141 2
(AU071696) Dictyostelium discoideum slug cDNA, clone SSC304. 428 e-115 1
(AU071608) Dictyostelium discoideum slug cDNA, clone SSB886. 408 e-111 2
(AU051883) Dictyostelium discoideum slug cDNA, clone SSC304. 82 4e-19 2
(AF358911) Dictyostelium discoideum apoptosis-linked gene 2 ... 96 3e-15 1
(AB056713) Dictyostelium discoideum DdPEF-1 mRNA for penta-E... 96 3e-15 1
(AU264221) Dictyostelium discoideum vegetative cDNA clone:VS... 96 3e-15 1
(AU076347) Dictyostelium discoideum slug cDNA, clone SSA625. 96 3e-15 1
(AU038363) Dictyostelium discoideum slug cDNA, clone SSH619. 96 3e-15 1
(C90011) Dictyostelium discoideum slug cDNA, clone SSG888. 96 3e-15 1
(C89854) Dictyostelium discoideum slug cDNA, clone SSG263. 96 3e-15 1
(C89737) Dictyostelium discoideum slug cDNA, clone SSG731. 96 3e-15 1
(AU264222) Dictyostelium discoideum vegetative cDNA clone:VS... 62 1e-09 2
(AF358913) Dictyostelium discoideum apoptosis-linked gene 2 ... 68 2e-08 2
(CU024887) M.truncatula DNA sequence from clone MTH2-174G4 o... 36 0.25 5
(CU468277) M.truncatula DNA sequence *** SEQUENCING CANCELLE... 36 0.51 5
(CU073362) AGENAE Rainbow trout multi-tissues library (tcce)... 48 0.63 1
(CP001291) Cyanothece sp. PCC 7424, complete genome. 48 0.63 1
(CZ932597) 253337 Tomato EcoRI BAC Library Solanum lycopersi... 46 2.5 1
(AC187039) Zea mays chromosome 7 clone CH201-16H14; ZMMBBc00... 40 4.3 4
(DX547595) GH_MBb0078A03f GH_MBb Gossypium hirsutum genomic ... 34 6.2 2
(CJ402951) Molgula tectiformis cDNA, gonad clone:mtgd019e09,... 34 6.3 2
(AC139761) Mus musculus BAC clone RP23-223C23 from 6, comple... 36 6.3 3
(CJ398023) Molgula tectiformis cDNA, gonad clone:mtgd001p20,... 34 6.4 2
(AC158142) Mus musculus chromosome 15, clone RP24-342H15, co... 44 9.8 1
(AC126971) Rattus norvegicus clone CH230-17G21, WORKING DRAF... 44 9.8 1
(CU929932) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 9.8 1
(AC231852) Oryza minuta clone OM__Ba0211A01, *** SEQUENCING ... 44 9.8 1
(AC181430) Strongylocentrotus purpuratus clone R3-50H14, WOR... 44 9.8 1
(ER766377) SB_BBc149-G08.F SB_BBc Sorghum bicolor genomic 5'... 44 9.8 1
(ER696865) SB_BBc157-O11.R SB_BBc Sorghum bicolor genomic 3'... 44 9.8 1
(ER657905) SB_BBc22-J11.F SB_BBc Sorghum bicolor genomic 5',... 44 9.8 1
(ER653083) SB_BBc99-F01.F SB_BBc Sorghum bicolor genomic 5',... 44 9.8 1
(ER649814) SB_BBc31-C01.F SB_BBc Sorghum bicolor genomic 5',... 44 9.8 1
(ER649142) SB_BBc66-N20.R SB_BBc Sorghum bicolor genomic 3',... 44 9.8 1
(ER647507) SB_BBc216-N12.F SB_BBc Sorghum bicolor genomic 5'... 44 9.8 1
(ER640513) SB_BBc135-I03.F SB_BBc Sorghum bicolor genomic 5'... 44 9.8 1
(ER628371) 1093018379533 Global-Ocean-Sampling_GS-36-01-01-2... 44 9.8 1
(AM637830) Entamoeba dispar GSS, clone dispar48c03.p1k. 44 9.8 1
(EI697346) SB_BBd15-N12.F SB_BBd Sorghum bicolor genomic 5',... 44 9.8 1
(CW460123) fsbb001f207d06f0 Sorghum methylation filtered lib... 44 9.8 1
(FK042896) XABT91681.g1 Gateway compatible cien cDNA library... 44 9.8 1

>(AB056714) Dictyostelium discoideum DdPEF-2 mRNA for penta-EF-hand
Ca2+-binding protein, complete cds.
Length = 740

Score = 741 bits (374), Expect(4) = 0.0
Identities = 374/374 (100%)
Strand = Plus / Plus


Query: 35 aatataaacttttttaattaaatgtacggatacggatatacaccagcagttgtagcacca 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 aatataaacttttttaattaaatgtacggatacggatatacaccagcagttgtagcacca 94


Query: 95 acagtcatgtcattctcatttgtcccacctcaagcattccaacaatgttggttttactca 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 acagtcatgtcattctcatttgtcccacctcaagcattccaacaatgttggttttactca 154


Query: 155 ttatacactcaaattcaacaagctcaattatatgaaatgcaatcttggtttatgagagtt 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 ttatacactcaaattcaacaagctcaattatatgaaatgcaatcttggtttatgagagtt 214


Query: 215 gatgcaaatcgtagcggaacaattagcagtggtgaattacaatatttaaatattggtggc 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gatgcaaatcgtagcggaacaattagcagtggtgaattacaatatttaaatattggtggc 274


Query: 275 actcctcttggtattgaaacagctactaaattaattaaagtttttgatcataataaaaat 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 actcctcttggtattgaaacagctactaaattaattaaagtttttgatcataataaaaat 334


Query: 335 ggtcaaattgatttctatgaatatgcagcacttcatcaatttatcaataacctttacaga 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ggtcaaattgatttctatgaatatgcagcacttcatcaatttatcaataacctttacaga 394


Query: 395 tgttttgttgccaa 408
||||||||||||||
Sbjct: 395 tgttttgttgccaa 408

Score = 406 bits (205), Expect(4) = 0.0
Identities = 205/205 (100%)
Strand = Plus / Plus


Query: 416 gtaatttcagtggtaccattgatgcaaatgaaatttataatgcactcattacaagtggat 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gtaatttcagtggtaccattgatgcaaatgaaatttataatgcactcattacaagtggat 473


Query: 476 tccaattaccattcccaactgttaactaccttttcttaaagttatccccaagtggttatg 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tccaattaccattcccaactgttaactaccttttcttaaagttatccccaagtggttatg 533


Query: 536 gccttttattcactcaattcttaaatttatgtgcaaccgtcgctttaactcgttcattat 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gccttttattcactcaattcttaaatttatgtgcaaccgtcgctttaactcgttcattat 593


Query: 596 ttgaatggaatgatccaatgagaac 620
|||||||||||||||||||||||||
Sbjct: 594 ttgaatggaatgatccaatgagaac 618

Score = 105 bits (53), Expect(4) = 0.0
Identities = 53/53 (100%)
Strand = Plus / Plus


Query: 621 ctggtgtagtccatttaaatttagctcaactttatgatatcattgctttagtt 673
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ctggtgtagtccatttaaatttagctcaactttatgatatcattgctttagtt 670

Score = 28.2 bits (14), Expect(4) = 0.0
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 1 ataaaatttataaa 14
||||||||||||||
Sbjct: 1 ataaaatttataaa 14

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 921,466,747
Number of extensions: 54231647
Number of successful extensions: 4283677
Number of sequences better than 10.0: 49
Length of query: 958
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 934
Effective length of database: 99,340,224,878
Effective search space: 92783770036052
Effective search space used: 92783770036052
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.18
Homology vs Protein
Query= Contig-U01592-1 (Contig-U01592-1Q) /CSM_Contig/Contig-U01592-1Q.Seq.d
(958 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q95YL4) RecName: Full=Penta-EF hand domain-containing protein 2... 255 2e-66
AY044085_2(AY044085|pid:none) Dictyostelium discoideum Rho GDP-d... 79 1e-13
AF082530_1(AF082530|pid:none) Entamoeba histolytica Grainin 2 (g... 64 1e-11
CT005252_146(CT005252|pid:none) Leishmania major strain Friedlin... 54 4e-11
AF291721_1(AF291721|pid:none) Entamoeba histolytica URE3-BP sequ... 69 2e-10
EU952518_1(EU952518|pid:none) Zea mays clone 1282225 hypothetica... 54 9e-10
AF085196_1(AF085196|pid:none) Entamoeba histolytica Grainin 1 (g... 59 4e-09
AE013599_1152(AE013599|pid:none) Drosophila melanogaster chromos... 53 1e-08
AB002727_1(AB002727|pid:none) Entamoeba histolytica mRNA for cal... 63 1e-08
EF103372_1(EF103372|pid:none) Haliotis discus discus apoptosis-l... 47 2e-08
(Q94743) RecName: Full=Sorcin; &U39069_1(U39069|pid:none) 57 7e-07
AY814388_1(AY814388|pid:none) Schistosoma japonicum SJCHGC01795 ... 57 1e-06
FN319651_1(FN319651|pid:none) Schistosoma japonicum isolate Anhu... 57 1e-06
FN314794_1(FN314794|pid:none) Schistosoma japonicum isolate Anhu... 56 2e-06
AF208390_1(AF208390|pid:none) Entamoeba histolytica actinin-like... 55 4e-06
AY815956_1(AY815956|pid:none) Schistosoma japonicum SJCHGC06659 ... 40 4e-06
EU952237_1(EU952237|pid:none) Zea mays clone 1272066 unknown mRNA. 54 8e-06
(Q9UBV8) RecName: Full=Peflin; AltName: Full=PEF protein with a ... 51 7e-05
AK339975_1(AK339975|pid:none) Acyrthosiphon pisum ACYPI005521 mR... 50 9e-05
BC140666_1(BC140666|pid:none) Bos taurus penta-EF-hand domain co... 50 1e-04
EF639013_1(EF639013|pid:none) Triatoma infestans clone TI-491 Ca... 49 3e-04
BC130164_1(BC130164|pid:none) Xenopus laevis hypothetical protei... 49 3e-04
DQ311266_1(DQ311266|pid:none) Bombyx mori apoptosis-linked prote... 47 7e-04
EF210317_1(EF210317|pid:none) Bombyx mori apoptosis-linked prote... 47 7e-04
(Q641Z8) RecName: Full=Peflin; AltName: Full=PEF protein with a ... 47 0.001
AK013238_1(AK013238|pid:none) Mus musculus 10, 11 days embryo wh... 47 0.001
BT076486_1(BT076486|pid:none) Caligus rogercresseyi clone crog-e... 47 0.001
EF145761_1(EF145761|pid:none) Populus trichocarpa clone WS0113_D... 46 0.002
(Q6DC93) RecName: Full=Peflin; AltName: Full=PEF protein with a ... 46 0.002
BT078767_1(BT078767|pid:none) Esox lucius clone eluc-evq-528-357... 46 0.002
BC053162_1(BC053162|pid:none) Danio rerio programmed cell death ... 46 0.002
AJ632071_1(AJ632071|pid:none) Suberites domuncula mRNA for apopt... 46 0.002
CR760932_1(CR760932|pid:none) Xenopus tropicalis finished cDNA, ... 46 0.002
AK339841_1(AK339841|pid:none) Acyrthosiphon pisum ACYPI004216 mR... 46 0.002
BT075615_1(BT075615|pid:none) Osmerus mordax clone omor-eva-518-... 46 0.002
AY808351_1(AY808351|pid:none) Schistosoma japonicum SJCHGC06474 ... 45 0.003
BC110939_1(BC110939|pid:none) Xenopus laevis programmed cell dea... 45 0.003
BC168744_1(BC168744|pid:none) Rattus norvegicus programmed cell ... 45 0.005
BC073099_1(BC073099|pid:none) Xenopus laevis MGC83560 protein, m... 34 0.007
BT057085_1(BT057085|pid:none) Salmo salar clone ssal-evf-548-257... 44 0.008
BC110291_1(BC110291|pid:none) Homo sapiens programmed cell death... 44 0.008
AX877818_1(AX877818|pid:none) Sequence 12723 from Patent EP10746... 44 0.008
BT057817_1(BT057817|pid:none) Salmo salar clone ssal-sjb-010-056... 44 0.011
BC031083_1(BC031083|pid:none) Homo sapiens plastin 1 (I isoform)... 43 0.014
(Q14651) RecName: Full=Plastin-1; AltName: Full=Intestine-specif... 43 0.014
AK290316_1(AK290316|pid:none) Homo sapiens cDNA FLJ78068 complet... 43 0.014
BT057803_1(BT057803|pid:none) Salmo salar clone ssal-eve-516-091... 43 0.014
(Q3V0K9) RecName: Full=Plastin-1; &AK133070_1(AK133070|pid:none... 43 0.014
AY891262_1(AY891262|pid:none) Synthetic construct Homo sapiens c... 42 0.024
AK078044_1(AK078044|pid:none) Mus musculus adult male medulla ob... 42 0.024
BC116154_1(BC116154|pid:none) Bos taurus programmed cell death 6... 42 0.024
(P12815) RecName: Full=Programmed cell death protein 6; AltName:... 42 0.024
FJ591154_1(FJ591154|pid:none) Oncorhynchus mykiss programmed cel... 42 0.024
AK147979_1(AK147979|pid:none) Mus musculus melanocyte cDNA, RIKE... 42 0.024
BC166134_1(BC166134|pid:none) Xenopus tropicalis hypothetical pr... 33 0.025
BC135414_1(BC135414|pid:none) Xenopus tropicalis hypothetical pr... 33 0.025
AC120985_3(AC120985|pid:none) Oryza sativa (japonica cultivar-gr... 42 0.031
(A6H742) RecName: Full=Plastin-1; &BC146105_1(BC146105|pid:none) 41 0.053
CP000496_1005(CP000496|pid:none) Pichia stipitis CBS 6054 chromo... 41 0.053
(Q6BWS8) RecName: Full=Calcineurin subunit B; AltName: Full=Prot... 41 0.053
AF194414_1(AF194414|pid:none) Oryza sativa calcium-dependent pro... 40 0.091
(Q9SN89) RecName: Full=Probable calcium-binding protein CML47; A... 40 0.091
CT005252_145(CT005252|pid:none) Leishmania major strain Friedlin... 40 0.091
BT041096_1(BT041096|pid:none) Zea mays full-length cDNA clone ZM... 40 0.091
CU928168_647(CU928168|pid:none) Kluyveromyces thermotolerans str... 40 0.091
T47245(T47245) calcineurin regulatory chain [imported] - Neurosp... 40 0.12
BC055369_1(BC055369|pid:none) Mus musculus solute carrier family... 40 0.16
AM920435_1189(AM920435|pid:none) Penicillium chrysogenum Wiscons... 40 0.16
AK228675_1(AK228675|pid:none) Arabidopsis thaliana mRNA for hypo... 39 0.20
(Q6NUK1) RecName: Full=Calcium-binding mitochondrial carrier pro... 39 0.20
AC007508_2(AC007508|pid:none) Genomic sequence for Arabidopsis t... 39 0.20
EF469732_1(EF469732|pid:none) Setosphaeria turcica calcineurin B... 39 0.20
AP007164_83(AP007164|pid:none) Aspergillus oryzae RIB40 genomic ... 39 0.20
AK316506_1(AK316506|pid:none) Homo sapiens cDNA, FLJ79405 comple... 39 0.20
(Q6CGE6) RecName: Full=Calcineurin subunit B; AltName: Full=Prot... 39 0.27
BC134711_1(BC134711|pid:none) Bos taurus calmodulin-like 5, mRNA... 39 0.35
CU640366_1300(CU640366|pid:none) Podospora anserina genomic DNA ... 39 0.35
EF026029_1(EF026029|pid:none) Lilium longiflorum clone LLP-50 ca... 39 0.35
AM270333_12(AM270333|pid:none) Aspergillus niger contig An15c006... 38 0.45
(Q9M101) RecName: Full=Calcium-dependent protein kinase 23; ... 38 0.45
(P87072) RecName: Full=Calcineurin subunit B; AltName: Full=Prot... 38 0.45
AF282385_1(AF282385|pid:none) Filobasidiella neoformans FK506-re... 38 0.59
AF034089_1(AF034089|pid:none) Neurospora crassa calcineurin subu... 38 0.59
(Q9ZSA2) RecName: Full=Calcium-dependent protein kinase 21; ... 38 0.59
AY050891_1(AY050891|pid:none) Arabidopsis thaliana putative calc... 38 0.59
(Q9HDE1) RecName: Full=Calcineurin subunit B; AltName: Full=Prot... 38 0.59
EU617320_1(EU617320|pid:none) Sus scrofa small calcium-binding m... 38 0.59
EU521743_1(EU521743|pid:none) Silene latifolia putative calcium ... 37 0.77
EU521741_1(EU521741|pid:none) Silene diclinis putative calcium d... 37 0.77
EU521731_1(EU521731|pid:none) Silene conica putative calcium dep... 37 0.77
(Q757B7) RecName: Full=Calcineurin subunit B; AltName: Full=Prot... 37 0.77
CP000498_422(CP000498|pid:none) Pichia stipitis CBS 6054 chromos... 37 0.77
AJ631223_1(AJ631223|pid:none) Silene latifolia partial mRNA for ... 37 0.77
AJ631224_1(AJ631224|pid:none) Silene latifolia partial gene for ... 37 0.77
EU521732_1(EU521732|pid:none) Silene noctiflora putative calcium... 37 0.77
AJ631226_1(AJ631226|pid:none) Silene dioica partial gene for put... 37 0.77
(Q93Z27) RecName: Full=Probable calcium-binding protein CML45; A... 37 0.77
AJ631225_1(AJ631225|pid:none) Silene dioica partial mRNA for put... 37 0.77
BC068561_1(BC068561|pid:none) Homo sapiens solute carrier family... 37 0.77
CU928174_563(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 37 0.77
AC151665_27(AC151665|pid:none) Medicago truncatula clone mth2-7k... 37 1.0
BC061655_1(BC061655|pid:none) Xenopus laevis hypothetical protei... 37 1.0
L36202_1(L36202|pid:none) Dictyostelium discoideum fimbrin (fimA... 37 1.0
AM428392_2(AM428392|pid:none) Vitis vinifera contig VV78X017201.... 37 1.0
(P25296) RecName: Full=Calcineurin subunit B; AltName: Full=Prot... 37 1.0
(Q6FLU4) RecName: Full=Calcineurin subunit B; AltName: Full=Prot... 37 1.0
(P54680) RecName: Full=Fimbrin; 37 1.0
(Q55G87) RecName: Full=Calcineurin subunit B type 1; AltName: Fu... 37 1.0
(O18757) RecName: Full=Calcium-binding mitochondrial carrier pro... 37 1.3
S31765(S31765) T-plastin - rat (fragment) &X70706_1(X70706|pid:... 37 1.3
BC094886_1(BC094886|pid:none) Xenopus tropicalis plastin 3 (T is... 37 1.3
(O88818) RecName: Full=Plastin-3; AltName: Full=T-plastin; &AB0... 37 1.3
CR382139_127(CR382139|pid:none) Debaryomyces hansenii strain CBS... 37 1.3
FN392320_632(FN392320|pid:none) Pichia pastoris GS115 chromosome... 37 1.3
(Q99K51) RecName: Full=Plastin-3; AltName: Full=T-plastin; &AB1... 37 1.3
AK160501_1(AK160501|pid:none) Mus musculus adult male tongue cDN... 37 1.3
AK304165_1(AK304165|pid:none) Homo sapiens cDNA FLJ50039 complet... 37 1.3
(Q63598) RecName: Full=Plastin-3; AltName: Full=T-plastin; 37 1.3
AL589842_1(AL589842|pid:none) Human DNA sequence from clone RP11... 36 1.7
(A7E3Q8) RecName: Full=Plastin-3; AltName: Full=T-plastin; &BT0... 36 1.7
AK298501_1(AK298501|pid:none) Homo sapiens cDNA FLJ50605 complet... 36 1.7
CR859218_1(CR859218|pid:none) Pongo abelii mRNA; cDNA DKFZp459D0... 36 1.7
AY893127_1(AY893127|pid:none) Synthetic construct Homo sapiens c... 36 1.7
(P13797) RecName: Full=Plastin-3; AltName: Full=T-plastin; &A34... 36 1.7
BC105483_1(BC105483|pid:none) Bos taurus plastin 3 (T isoform), ... 36 1.7
BC167378_1(BC167378|pid:none) Xenopus tropicalis hypothetical pr... 36 1.7
(Q6P069) RecName: Full=Sorcin; &AK134747_1(AK134747|pid:none) &... 36 2.2
(Q9MBG5) RecName: Full=Probable calcium-binding protein CML30; A... 36 2.2
AK008783_1(AK008783|pid:none) Mus musculus adult male stomach cD... 36 2.2
AK008404_1(AK008404|pid:none) Mus musculus adult male small inte... 36 2.2
CP001160_195(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 35 2.9
Z28189_1(Z28189|pid:none) S.cerevisiae chromosome XI reading fra... 35 2.9
AM910990_305(AM910990|pid:none) Plasmodium knowlesi strain H chr... 35 2.9
AB103586_1(AB103586|pid:none) Babesia rodhaini BrCDPK mRNA for c... 35 3.8
BT079605_1(BT079605|pid:none) Esox lucius clone eluc-evq-520-228... 35 3.8
(Q9N1Q8) RecName: Full=Calcium-binding protein 5; Short... 35 3.8
AJ301668_1(AJ301668|pid:none) Dictyostelium discoideum cnbA gene... 35 3.8
FN357388_1(FN357388|pid:none) Schistosoma mansoni genome sequenc... 35 3.8
(Q6L5F4) RecName: Full=Probable calcium-binding protein CML14; A... 35 3.8
(Q9FYE4) RecName: Full=Probable calcium-binding protein CML50; A... 35 3.8
AY861686_1(AY861686|pid:none) Meloidogyne incognita troponin C-l... 35 3.8
EU952907_1(EU952907|pid:none) Zea mays clone 1347188 calmodulin ... 35 3.8
AY389513_1(AY389513|pid:none) Eimeria tenella calmodulin-domain ... 35 5.0
AK220422_1(AK220422|pid:none) Mus musculus mRNA for mKIAA1799 pr... 35 5.0
(Q63811) RecName: Full=Calcineurin subunit B type 2; AltName: Fu... 35 5.0
AL359258_2(AL359258|pid:none) Human DNA sequence from clone RP11... 35 5.0
AK143777_1(AK143777|pid:none) Mus musculus 6 days neonate spleen... 35 5.0
DQ205648_1(DQ205648|pid:none) Eimeria tenella calmodulin-like do... 34 6.5
(P21671) RecName: Full=1-phosphatidylinositol-4,5-bisphosphate p... 34 6.5
FB335045_1(FB335045|pid:none) Sequence 2571 from Patent WO200711... 34 6.5
AM910985_116(AM910985|pid:none) Plasmodium knowlesi strain H chr... 34 6.5
AY247755_1(AY247755|pid:none) Glycine max seed calcium dependent... 34 6.5
AB066374_1(AB066374|pid:none) Gallus gallus brca2 mRNA for tumor... 34 6.5
FB924757_1(FB924757|pid:none) Sequence 144030 from Patent WO2008... 34 6.5
(Q8SPR7) RecName: Full=1-phosphatidylinositol-4,5-bisphosphate p... 34 6.5
S14113(S14113;S04944)1-phosphatidylinositol-4,5-bisphosphate pho... 34 6.5
Z71757_1(Z71757|pid:none) E.tenella mRNA for calmodulin-domain p... 34 6.5
BC083305_1(BC083305|pid:none) Danio rerio calcium binding protei... 34 8.5
AB168501_1(AB168501|pid:none) Macaca fascicularis testis cDNA cl... 34 8.5
AE017341_4(AE017341|pid:none) Cryptococcus neoformans var. neofo... 34 8.5
BC043993_1(BC043993|pid:none) Xenopus laevis hypothetical protei... 34 8.5
CR954204_362(CR954204|pid:none) Ostreococcus tauri strain OTTH05... 34 8.5
AC078839_23(AC078839|pid:none) Oryza sativa (japonica cultivar-g... 34 8.5
AF078680_1(AF078680|pid:none) Olea europaea calcium-binding prot... 34 8.5

>(Q95YL4) RecName: Full=Penta-EF hand domain-containing protein 2;
AltName: Full=DdPEF-2; AltName: Full=Apoptosis-linked
gene 2 protein homolog B; AltName: Full=Dd-ALG-2b;
&AB056714_1(AB056714|pid:none)
&AF358912_1(AF358912|pid:none)
&AF358914_1(AF358914|pid:none)
Length = 205

Score = 255 bits (651), Expect = 2e-66
Identities = 140/214 (65%), Positives = 150/214 (70%), Gaps = 13/214 (6%)
Frame = +2

Query: 56 MYGYGYTPAVVAPTVMSFSFVPPQAFQQCWFYSLYTQIQQAQLYEMQSWFMRVDANRSGT 235
MYGYGYTPAVVAPTVMSFSFVPPQAFQQCWFYSLYTQIQQAQLYEMQSWFMRVDANRSGT
Sbjct: 1 MYGYGYTPAVVAPTVMSFSFVPPQAFQQCWFYSLYTQIQQAQLYEMQSWFMRVDANRSGT 60

Query: 236 ISSGELQYLNIGGTPLGIETATKLIKVFDHNKNGQIDFYEYAALHQFINNLYRCFVAK*S 415
ISSGELQYLNIGGTPLGIETATKLIKVFDHNKNGQIDFYEYAALHQFINNLYRCFVA
Sbjct: 61 ISSGELQYLNIGGTPLGIETATKLIKVFDHNKNGQIDFYEYAALHQFINNLYRCFVANDR 120

Query: 416 VISVVPLMQMKFIMHSLQVDSNYHSQLLTTFS*SYPQVVMAFYSLNS*IYVQPSL*LVHY 595
S ++ + Y++ + + F +P V F L+ Y L +
Sbjct: 121 NFS-----------GTIDANEIYNALITSGFQLPFPTVNYLFLKLSPSGY---GLLFTQF 166

Query: 596 LNGMI-------------Q*EPGVVHLNLAQLYD 658
LN GVVHLNLAQLYD
Sbjct: 167 LNLCATVALTRSLFEWNDPMRTGVVHLNLAQLYD 200

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,075,728,184
Number of extensions: 20045850
Number of successful extensions: 46672
Number of sequences better than 10.0: 164
Number of HSP's gapped: 46585
Number of HSP's successfully gapped: 177
Length of query: 319
Length of database: 1,051,180,864
Length adjustment: 128
Effective length of query: 191
Effective length of database: 636,901,312
Effective search space: 121648150592
Effective search space used: 121648150592
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.07 gvh: 0.48 alm: 0.18 top: 0.60 tms: 0.07 mit: 0.34 mip: 0.00
nuc: 3.42 erl: 0.00 erm: 1.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.11 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 1.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

56.0 %: nuclear
16.0 %: cytoplasmic
12.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: plasma membrane
4.0 %: endoplasmic reticulum
4.0 %: peroxisomal

>> prediction for Contig-U01592-1 is nuc

VS (DIR, S) 3
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 2
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0