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Dicty_cDB
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U09598-1
Contig ID Contig-U09598-1
Contig update 2002. 9.13
Contig sequence 
>Contig-U09598-1 (Contig-U09598-1Q) /CSM_Contig/Contig-U09598-1Q.Seq.d
GAAAAAAAGAGAGAAAAATTGAATTAAATAAATAAATAAAAAAATGGCAC
CACCAAATAAATCATCAAATAGAAATAAAAGTAATAATAATAATAATAAA
AATAAAGTTAAAAGTAAAAAAAGTAAAAGATCAATAGATGAAACACCAGA
AGCATTAGATTTAGATCAAGCAGCAATTAGTAAATCAATTGTATATAAAA
GAGGTGATTGTAATAAAGGTATAAAGAAATTAGTTAAAGAGTTTAGACAG
GTAATGGAGCCATATACAGCAACTAAACTCCAAGAGACATCAGACAATAC
CACCNAAGATTTTGTAAACATTGCAGCACATTACGGTGTTTCACATTTGG
TTGGNTTCAGTTCAACCGA----------TTCNANTTTAGNAGATATTAG
TGATTATGTTATGAATGGATTGGGTGCAACAGAGAGTGATTATGAAGATG
CAAATGATGGTCAAGTTGAGTTGAGTTCAAAGATGATCAATTCAAAAGCA
AAGAATATAAAATTGGAACATAAGGGATTGGATATTAATACCACTCAAAA
GAGAGCAATCAAACTGGAAGAAATCGGACCACGTATGAATCTTTCTTTGT
TAAAGGTTGAAGATGATCTTTACAAGGGTGAAGTACTCTACCATCAATAC
ATTAAAAAGAGTGATATCGAGAAAGAAGAAGCTAAACTTCGTAGAGATGA
AGCTAANNTCGAAAAAGAACGT
Gap gap included
Contig length 712
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 3343926
End point 3344639
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 2
Link to clone list U09598
List of clone(s) 

est1=VFE807F,1,370
est2=VFE807Z,371,714
Translated Amino Acid sequence 
kkrekn*ik*INKKMAPPNKSSNRNKSNNNNNKNKVKSKKSKRSIDETPEALDLDQAAIS
KSIVYKRGDCNKGIKKLVKEFRQVMEPYTATKLQETSDNTTXDFVNIAAHYGVSHLVGFS
ST---

---SXLXDISDYVMNGLGATESDYEDANDGQVELSSKMINSKAKNIKLEHKGLDINTTQK
RAIKLEEIGPRMNLSLLKVEDDLYKGEVLYHQYIKKSDIEKEEAKLRRDEAXXEKER
Translated Amino Acid sequence (All Frames) 
Frame A:
ekkrekln*ink*kngttk*iik*k*k******k*s*k*kk*kinr*ntrsirfrsssn*
*inci*kr*l**rykeis*rv*tgngaiysn*tprdirqyhxrfckhcstlrcftfgwxq
fnr---

---fxfxry**lcyewigcnre*l*rck*wss*vefkddqfkskeykigt*gigy*yhsk
esnqtgrnrttyesffvkg*r*slqg*stlpsih*ke*yrerrs*ts*r*s*xrkrt

Frame B:
kkrekn*ik*INKKMAPPNKSSNRNKSNNNNNKNKVKSKKSKRSIDETPEALDLDQAAIS
KSIVYKRGDCNKGIKKLVKEFRQVMEPYTATKLQETSDNTTXDFVNIAAHYGVSHLVGFS
ST---

---SXLXDISDYVMNGLGATESDYEDANDGQVELSSKMINSKAKNIKLEHKGLDINTTQK
RAIKLEEIGPRMNLSLLKVEDDLYKGEVLYHQYIKKSDIEKEEAKLRRDEAXXEKER

Frame C:
kkerkielnk*ikkwhhqinhqieikviiiiikiklkvkkvkdq*mkhqkh*i*ikqqlv
nqlyikevivikv*rn*lksldr*wshiqqlnskrhqtippkil*tlqhitvfhiwlxsv
qp---

---xx*xilviml*mdwvqqrvimkmqmmvkls*vqr*siqkqri*nwnirdwiliplkr
eqsnwkksdhv*iflc*rlkmiftrvkystintlkrvisrkkklnfvemklxskkn
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U09598-1 (Contig-U09598-1Q)
/CSM_Contig/Contig-U09598-1Q.Seq.d
         (722 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U09598-1 (Contig-U09598-1Q) /CSM_Contig/Conti...  1076  0.0
Contig-U11234-1 (Contig-U11234-1Q) /CSM_Contig/Conti...    38  0.013
Contig-U12161-1 (Contig-U12161-1Q) /CSM_Contig/Conti...    34  0.20
Contig-U09419-1 (Contig-U09419-1Q) /CSM_Contig/Conti...    34  0.20
Contig-U14717-1 (Contig-U14717-1Q) /CSM_Contig/Conti...    32  0.79
Contig-U13965-1 (Contig-U13965-1Q) /CSM_Contig/Conti...    32  0.79
Contig-U13615-1 (Contig-U13615-1Q) /CSM_Contig/Conti...    32  0.79
Contig-U12835-1 (Contig-U12835-1Q) /CSM_Contig/Conti...    32  0.79
Contig-U12775-1 (Contig-U12775-1Q) /CSM_Contig/Conti...    32  0.79
Contig-U12542-1 (Contig-U12542-1Q) /CSM_Contig/Conti...    32  0.79

>Contig-U09598-1 (Contig-U09598-1Q) /CSM_Contig/Contig-U09598-1Q.Seq.d
          Length = 722

 Score = 1076 bits (543), Expect = 0.0
 Identities = 594/594 (100%)
 Strand = Plus / Plus

                                                                       
Query: 129 gatcaatagatgaaacaccagaagcattagatttagatcaagcagcaattagtaaatcaa 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gatcaatagatgaaacaccagaagcattagatttagatcaagcagcaattagtaaatcaa 188

                                                                       
Query: 189 ttgtatataaaagaggtgattgtaataaaggtataaagaaattagttaaagagtttagac 248
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttgtatataaaagaggtgattgtaataaaggtataaagaaattagttaaagagtttagac 248

                                                                       
Query: 249 aggtaatggagccatatacagcaactaaactccaagagacatcagacaataccaccnaag 308
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aggtaatggagccatatacagcaactaaactccaagagacatcagacaataccaccnaag 308

                                                                       
Query: 309 attttgtaaacattgcagcacattacggtgtttcacatttggttggnttcagttcaaccg 368
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 attttgtaaacattgcagcacattacggtgtttcacatttggttggnttcagttcaaccg 368

                                                                       
Query: 369 annnnnnnnnnttcnantttagnagatattagtgattatgttatgaatggattgggtgca 428
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 annnnnnnnnnttcnantttagnagatattagtgattatgttatgaatggattgggtgca 428

                                                                       
Query: 429 acagagagtgattatgaagatgcaaatgatggtcaagttgagttgagttcaaagatgatc 488
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 acagagagtgattatgaagatgcaaatgatggtcaagttgagttgagttcaaagatgatc 488

                                                                       
Query: 489 aattcaaaagcaaagaatataaaattggaacataagggattggatattaataccactcaa 548
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 aattcaaaagcaaagaatataaaattggaacataagggattggatattaataccactcaa 548

                                                                       
Query: 549 aagagagcaatcaaactggaagaaatcggaccacgtatgaatctttctttgttaaaggtt 608
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aagagagcaatcaaactggaagaaatcggaccacgtatgaatctttctttgttaaaggtt 608

                                                                       
Query: 609 gaagatgatctttacaagggtgaagtactctaccatcaatacattaaaaagagtgatatc 668
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gaagatgatctttacaagggtgaagtactctaccatcaatacattaaaaagagtgatatc 668

                                                                 
Query: 669 gagaaagaagaagctaaacttcgtagagatgaagctaanntcgaaaaagaacgt 722
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gagaaagaagaagctaaacttcgtagagatgaagctaanntcgaaaaagaacgt 722


>Contig-U11234-1 (Contig-U11234-1Q) /CSM_Contig/Contig-U11234-1Q.Seq.d
          Length = 2513

 Score = 38.2 bits (19), Expect = 0.013
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 597  ttgttaaaggttgaagatg 615
            |||||||||||||||||||
Sbjct: 2106 ttgttaaaggttgaagatg 2088


>Contig-U12161-1 (Contig-U12161-1Q) /CSM_Contig/Contig-U12161-1Q.Seq.d
          Length = 1414

 Score = 34.2 bits (17), Expect = 0.20
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 182 aaatcaattgtatataa 198
           |||||||||||||||||
Sbjct: 750 aaatcaattgtatataa 766


 Score = 30.2 bits (15), Expect = 3.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 214 taaaggtataaagaa 228
           |||||||||||||||
Sbjct: 78  taaaggtataaagaa 92


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5261
Number of Sequences: 6905
Number of extensions: 5261
Number of successful extensions: 490
Number of sequences better than 10.0: 44
length of query: 722
length of database: 5,674,871
effective HSP length: 16
effective length of query: 706
effective length of database: 5,564,391
effective search space: 3928460046
effective search space used: 3928460046
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.16
Homology vs DNA 
Query= Contig-U09598-1 (Contig-U09598-1Q) /CSM_Contig/Contig-U09598-1Q.Seq.d
         (722 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ427950) Dictyostelium discoideum cDNA clone:ddv10n02, 3' ...   650   0.0    1
(BJ409831) Dictyostelium discoideum cDNA clone:ddv10n02, 5' ...   464   e-126  1
(AL772302) Mouse DNA sequence from clone RP23-450F9 on chrom...    48   0.46   1
(CS796933) Sequence 5 from Patent WO2007089611.                    48   0.46   1
(CS794020) Sequence 5 from Patent WO2007089584.                    48   0.46   1
(Z49154) Human DNA sequence from clone LA04NC01-1C2 on chrom...    48   0.46   1
(AL390059) Human DNA sequence from clone RP11-399E10 on chro...    48   0.46   1
(AC005516) Homo sapiens Chromosome 4p16.3 BAC clone 399e10 c...    48   0.46   1
(AZ977351) 2M0253B17F Mouse 10kb plasmid UUGC2M library Mus ...    48   0.46   1
(AC201664) Strongylocentrotus purpuratus clone R3-3083N5, WO...    46   1.8    1
(EI153268) DH016N07_F1.ab1 Brachypodium distachyon Bd21 Hind...    46   1.8    1
(AM451753) Vitis vinifera contig VV78X157482.9, whole genome...    32   3.9    2
(AC164660) Pan troglodytes BAC clone CH251-50D16 from chromo...    44   7.2    1
(AM464183) Vitis vinifera contig VV78X000980.5, whole genome...    44   7.2    1
(AL161492) Arabidopsis thaliana DNA chromosome 4, contig fra...    44   7.2    1
(AF069300) Arabidopsis thaliana BAC F3D13.                         44   7.2    1
(AC093511) Homo sapiens chromosome 16 clone CTD-2507C6, comp...    44   7.2    1
(AC009158) Homo sapiens chromosome 16 clone RP11-67I10, comp...    44   7.2    1
(AM630834) Entamoeba dispar GSS, clone dispar60a09.p1k.            44   7.2    1
(CW834864) OP__Ba0094P21.f OP__Ba Oryza punctata genomic clo...    44   7.2    1
(CU853359) A BAC library has been constructed from PN40024 g...    44   7.2    1
(CU751122) A BAC library has been constructed from PN40024 g...    44   7.2    1
(CU749437) A BAC library has been constructed from PN40024 g...    44   7.2    1
(AC148427) Macropus eugenii clone ME_KBa-170K8, WORKING DRAF...    38   9.7    2

>(BJ427950) Dictyostelium discoideum cDNA clone:ddv10n02, 3' end,
           single read.
          Length = 344

 Score =  650 bits (328), Expect = 0.0
 Identities = 337/337 (100%)
 Strand = Plus / Minus


Query: 386 tttagnagatattagtgattatgttatgaatggattgggtgcaacagagagtgattatga 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tttagnagatattagtgattatgttatgaatggattgggtgcaacagagagtgattatga 279


Query: 446 agatgcaaatgatggtcaagttgagttgagttcaaagatgatcaattcaaaagcaaagaa 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 agatgcaaatgatggtcaagttgagttgagttcaaagatgatcaattcaaaagcaaagaa 219


Query: 506 tataaaattggaacataagggattggatattaataccactcaaaagagagcaatcaaact 565
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tataaaattggaacataagggattggatattaataccactcaaaagagagcaatcaaact 159


Query: 566 ggaagaaatcggaccacgtatgaatctttctttgttaaaggttgaagatgatctttacaa 625
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 ggaagaaatcggaccacgtatgaatctttctttgttaaaggttgaagatgatctttacaa 99


Query: 626 gggtgaagtactctaccatcaatacattaaaaagagtgatatcgagaaagaagaagctaa 685
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98  gggtgaagtactctaccatcaatacattaaaaagagtgatatcgagaaagaagaagctaa 39


Query: 686 acttcgtagagatgaagctaanntcgaaaaagaacgt 722
           |||||||||||||||||||||||||||||||||||||
Sbjct: 38  acttcgtagagatgaagctaanntcgaaaaagaacgt 2

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 631,667,286
Number of extensions: 35542767
Number of successful extensions: 2756482
Number of sequences better than 10.0: 25
Length of query: 722
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 698
Effective length of database: 97,308,875,965
Effective search space: 67921595423570
Effective search space used: 67921595423570
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 6.26
Homology vs Protein 
Query= Contig-U09598-1 (Contig-U09598-1Q) /CSM_Contig/Contig-U09598-1Q.Seq.d
         (722 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

FN392319_606(FN392319|pid:none) Pichia pastoris GS115 chromosome...    69   2e-10
Z98531_1(Z98531|pid:none) S.pombe chromosome I cosmid c6B12.           64   5e-09
(O14206) RecName: Full=Brix domain-containing protein C1B9.03c; ...    64   5e-09
AF102805_1(AF102805|pid:none) Drosophila melanogaster Peter Pan ...    63   1e-08
CR382123_630(CR382123|pid:none) Kluyveromyces lactis strain NRRL...    62   2e-08
CU638744_754(CU638744|pid:none) Podospora anserina genomic DNA c...    62   2e-08
CP000497_462(CP000497|pid:none) Pichia stipitis CBS 6054 chromos...    62   2e-08
AM920428_276(AM920428|pid:none) Penicillium chrysogenum Wisconsi...    62   2e-08
AE016814_147(AE016814|pid:none) Ashbya gossypii (= Eremothecium ...    60   5e-08
BC045053_1(BC045053|pid:none) Xenopus laevis similar to peter pa...    59   1e-07
CU928175_591(CU928175|pid:none) Zygosaccharomyces rouxii strain ...    59   1e-07
CU928170_295(CU928170|pid:none) Kluyveromyces thermotolerans str...    59   1e-07
BC080470_1(BC080470|pid:none) Xenopus tropicalis cDNA clone MGC:...    59   2e-07
BC064262_1(BC064262|pid:none) Xenopus tropicalis solute carrier ...    59   2e-07
BC045506_1(BC045506|pid:none) Danio rerio peter pan homolog (Dro...    58   3e-07
BC000535_1(BC000535|pid:none) Homo sapiens peter pan homolog (Dr...    58   3e-07
AJ300588_1(AJ300588|pid:none) Homo sapiens mRNA for SSF1/P2Y11 c...    58   3e-07
(Q9NQ55) RecName: Full=Suppressor of SWI4 1 homolog;          Sh...    58   3e-07
AF043700_4(AF043700|pid:none) Caenorhabditis elegans cosmid K09H...    58   3e-07
BC089842_1(BC089842|pid:none) Rattus norvegicus peter pan homolo...    56   1e-06
EF677118_1(EF677118|pid:none) Picea sitchensis clone WS02762_C07...    55   2e-06
AK060603_1(AK060603|pid:none) Oryza sativa Japonica Group cDNA c...    55   3e-06
BT043067_1(BT043067|pid:none) Zea mays full-length cDNA clone ZM...    54   6e-06
AE017343_104(AE017343|pid:none) Cryptococcus neoformans var. neo...    52   1e-05
CP000595_142(CP000595|pid:none) Ostreococcus lucimarinus CCE9901...    52   2e-05
CR954216_185(CR954216|pid:none) Ostreococcus tauri strain OTTH05...    50   9e-05
AC146777_26(AC146777|pid:none) Medicago truncatula clone mth2-17...    49   1e-04
AY813167_1(AY813167|pid:none) Schistosoma japonicum SJCHGC02371 ...    49   2e-04
AC104642_9(AC104642|pid:none) Trypanosoma brucei chromosome 3 cl...    48   3e-04
AM502221_50(AM502221|pid:none) Leishmania infantum chromosome 3.       47   8e-04
AC125735_88(AC125735|pid:none) Leishmania major strain Friedlin ...    47   8e-04
FN357854_1(FN357854|pid:none) Schistosoma mansoni genome sequenc...    46   0.001
AM494940_81(AM494940|pid:none) Leishmania braziliensis chromosom...    46   0.001
BT035176_1(BT035176|pid:none) Zea mays full-length cDNA clone ZM...    45   0.002
BT021221_1(BT021221|pid:none) Drosophila melanogaster RH53050 fu...    45   0.003
BT086261_1(BT086261|pid:none) Zea mays full-length cDNA clone ZM...    44   0.007
FJ167344_1(FJ167344|pid:none) Plasmodium berghei TREP precursor,...    43   0.011
FJ160771_1(FJ160771|pid:none) Plasmodium berghei isolate ANKA sp...    43   0.011
CR940348_521(CR940348|pid:none) Theileria annulata strain Ankara...    40   0.094
AM910984_138(AM910984|pid:none) Plasmodium knowlesi strain H chr...    39   0.16
AB209996_1(AB209996|pid:none) Homo sapiens mRNA for CENPE varian...    36   1.0
S28261(S28261) centromere protein E - human  &Z15005_1(Z15005|pi...    36   1.0
AE014188_63(AE014188|pid:none) Plasmodium falciparum 3D7 chromos...    36   1.0
AE014185_262(AE014185|pid:none) Plasmodium falciparum 3D7 chromo...    36   1.4
AM910995_14(AM910995|pid:none) Plasmodium knowlesi strain H chro...    35   1.8
AJ938182_740(AJ938182|pid:none) Staphylococcus aureus RF122 comp...    35   1.8
L01992_1(L01992|pid:none) Saccharomyces cerevisiae myosin-like p...    35   2.3
(Q8C156) RecName: Full=Condensin complex subunit 2; AltName: Ful...    35   2.3
BC021499_1(BC021499|pid:none) Mus musculus non-SMC condensin I c...    35   2.3
CP000678_778(CP000678|pid:none) Methanobrevibacter smithii ATCC ...    35   2.3
AB007871_1(AB007871|pid:none) Homo sapiens KIAA0411 mRNA, partia...    34   5.2
AB384477_1(AB384477|pid:none) Synthetic construct DNA, clone: pF...    34   5.2
AK122276_1(AK122276|pid:none) Mus musculus mRNA for mKIAA0411 pr...    34   5.2
(O43295) RecName: Full=SLIT-ROBO Rho GTPase-activating protein 3...    34   5.2
(Q812A2) RecName: Full=SLIT-ROBO Rho GTPase-activating protein 3...    34   5.2
AK051262_1(AK051262|pid:none) Mus musculus 12 days embryo spinal...    34   5.2
CU633900_557(CU633900|pid:none) Podospora anserina genomic DNA c...    34   5.2
AK045508_1(AK045508|pid:none) Mus musculus adult male corpora qu...    34   5.2
AK129047_1(AK129047|pid:none) Mus musculus mRNA for mKIAA0074 pr...    33   6.7
(Q7VK73) RecName: Full=UvrABC system protein C;          Short=P...    33   6.7
(Q2KJB9) RecName: Full=Coiled-coil domain-containing protein KIA...    33   6.7
AX056907_1(AX056907|pid:none) Sequence 47 from Patent WO0075320....    33   8.8
AX056909_1(AX056909|pid:none) Sequence 49 from Patent WO0075320.       33   8.8
BC076739_1(BC076739|pid:none) Xenopus laevis MGC81432 protein, m...    33   8.8
AY389741_1(AY389741|pid:none) Hyacinthus orientalis unknown mRNA.      33   8.8
FM992688_1137(FM992688|pid:none) Candida dubliniensis CD36 chrom...    33   8.8

>FN392319_606(FN392319|pid:none) Pichia pastoris GS115 chromosome 1,
           complete sequence.
          Length = 408

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 46/115 (40%), Positives = 68/115 (59%), Gaps = 3/115 (2%)
 Frame = +3

Query: 387 LXDISDYVMNG--LGAT-ESDYEDANDGQVELSSKMINSKAKNIKLEHKGLDINTTQKRA 557
           + DIS+ + +   LG T ES+ ED  +  V++      +KAK IK E      N  +K+A
Sbjct: 234 IKDISEILEDSHHLGYTSESEVED-EESLVQVDETESLTKAKVIKNEGGA---NNIRKKA 289

Query: 558 IKLEEIGPRMNLSLLKVEDDLYKGEVLYHQYIKKSDIEKEEAKLRRDEAXXEKER 722
           IKL E+GPR+ + L+K+E  +  GEVLYH+Y+KKSD E  + K R  +   EK +
Sbjct: 290 IKLVELGPRLRMELVKIEAGVCDGEVLYHRYVKKSDSEIIQQKKRLSQKESEKAK 344

 Score = 35.8 bits (81), Expect = 1.4
 Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
 Frame = +2

Query: 149 EALDLDQAAISKSIVYKRGDC--NKGIKKLVKEFRQVMEPYTATKLQETSDNTTXDFVNI 322
           + ++ +   + KS++ + G    N  +++L  + R +M+P+TA  L+E   N   D+V +
Sbjct: 13  QPVEEEDVNVPKSMIIRVGSSFHNPSLQQLSLDLRVLMQPHTAINLRERRKNCLKDYVVM 72

Query: 323 AAHYGVSHLVGFS 361
               GV+ L+  S
Sbjct: 73  CGPLGVTQLMTLS 85

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 766,742,986
Number of extensions: 12237455
Number of successful extensions: 32274
Number of sequences better than 10.0: 66
Number of HSP's gapped: 32206
Number of HSP's successfully gapped: 96
Length of query: 240
Length of database: 1,040,966,779
Length adjustment: 125
Effective length of query: 115
Effective length of database: 640,431,154
Effective search space: 73649582710
Effective search space used: 73649582710
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
PSORT 

 psg: 0.41  gvh: 0.27  alm: 0.45  top: 0.53  tms: 0.00  mit: 0.47  mip: 0.07
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: cytoplasmic
	 32.0 %: mitochondrial
	 28.0 %: nuclear
	  4.0 %: cytoskeletal

>> prediction for Contig-U09598-1 is cyt
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 1
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0