Contig-U09595-1
Contig ID Contig-U09595-1
Contig update 2002. 9.13
Contig sequence
>Contig-U09595-1 (Contig-U09595-1Q) /CSM_Contig/Contig-U09595-1Q.Seq.d
GGCCTACTGGAAAACATACAATAATATATATCATTTTACAAAAAAAAGAA
AAATGATGAATTTAGGTAATCGTGTTAAATCGGTTATTAAATTAACTTCA
ACAACAGGTTTAACAGGCAAAGATTTTCAAGCAACCAAAGTTGCAACATT
TTCAACAGCACAAGTTCAACAAGCACAAGAAAATGTTAGATCATATGGTG
GTTTGAAGGATAAAGATCGTATTTTCACAAATTTATATGGTGAACATGAC
GTTTATTTAAAGGGTGCTATTGCACGTGGAGATTGGTATAAAACTAAAAA
TATTATTGATAAAGGTAAAGATTGGATATTAAAAGAAATGATGGCCTCTG
GTTTAAGAGGTAGAGGTGGTGCTGGTTTCCCATCAGGTTTGAAATGGAGT
TTCATGCCAAAAACAACTTCAAAAGATAGACCACAATACCTTGTCATCAA
TGCTGATGAGGGTGAACCTGGAACATGCAAAGATAGAGAAATTATGAGAC
ACGATCCTCATAAATTAATTGAAGGTTGTTTACTTGCTGGTTTTGCAATG
AGAGCATGTGCAGCATACATTTATATTCGTGGTGAATTTCATTATGAAGC
AAAAGTATTAGAACAAGCAATCGATGAAGCATATAAAGCAGGTTTAATTG
GTGAAAATGCATGCGGTACA----------GCATATTTATACCTATATAT
ACATAAAATGACTAAAAACGTAATTGGTTCAATAACAAAGAATTTAGAAA
CAGTATTTGGAACTTTAGCAAAAAGAAAGAGTAAAGGTGAAAATTTATTA
GATGTTTGTTTTTCATTACCAAGTAGAGGTGTTGGAAATAAATTTGCTAA
AATGGGTTGGACTGAAAAAGATACATATTGGACCGTAACAAAAACAAAAT
TTAATAGTATTACTTGGCGGTGCTTGGTTTGCAAGTTTTGGTAGACCAAA
GAATGCAGGTACTAAATTATTTTGTATTTCCCGGTCATGTCAATAATCCC
ATGTACTGTTGAAGAAGAGATGAGTATTCCATTAAGAGAATTAATTGATA
AACATTGTGGTGGTGTCATTGGAGGTTGGGATAACTTAAAAGGTGTTATT
CCAGGGTGGTTCATCAGTACCAGTCCTTCCAAAAAATATTTGTGATAATG
TTTTAATGGATTTCGATGATCTTAGACAACACAGATCTGGTTTAGGTACA
GCTGCAGTTATAGTTATGAACAAAGAAACTGATATGATTGCAGCAATTGC
AAGATTATCTAAATTCTATAAACACGAATCATGTGGTCAATGTACCCCAT
GTCGTGAAGGTGTTGGATGGCTCTATGATATCACCGATCGTTTAGTCACT
GGTAATGCCAAACCCGATGAAATTGATTCACTTGAAGAAATTAGTAGACA
AATTGAAGGTCACACCATTTGTGCTTTAGGTGATGCTGCTGCTTGGCCAG
TACAAGGTTTAATTAGACATTTTAGACCAGAAATTGAAGATAGAATTAAA
CAATTCCAACTCAATAAGAAACAATCACCATTTTAAATTGTTTATCTAAT
ATTATTTATAATAGTATTATTAAAATAATAATAATAATAATCACACACCA
AAAACGCAATAAGAAATTAATTAATATTAATTTTTCCCCACTGCATCATA
AACCTCATAATATATAATAAAAAAAAA

Gap gap included
Contig length 1667
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 2102149
End point 2103813
Strand (PLUS/MINUS) PLUS
Number of clones 12
Number of EST 18
Link to clone list U09595
List of clone(s)

est1=VFJ750F,1,525
est2=VFO745F,2,492
est3=VFJ324F,11,670
est4=VFE815F,16,135
est5=VFK318F,16,575
est6=VSH769F,50,222
est7=VFE384F,369,565
est8=VSH439E,671,1652
est9=VFJ324Z,935,1585
est10=VFK318Z,942,1607
est11=VFJ750Z,972,1647
est12=VFD719Z,1065,1631
est13=VSH289E,1068,1557
est14=VFE384Z,1078,1629
est15=VSH769Z,1096,1366
est16=VFA673Z,1170,1635
est17=VSJ555F,1377,1668
est18=VSJ555Z,1377,1631
Translated Amino Acid sequence
AYWKTYNNIYHFTKKRKMMNLGNRVKSVIKLTSTTGLTGKDFQATKVATFSTAQVQQAQE
NVRSYGGLKDKDRIFTNLYGEHDVYLKGAIARGDWYKTKNIIDKGKDWILKEMMASGLRG
RGGAGFPSGLKWSFMPKTTSKDRPQYLVINADEGEPGTCKDREIMRHDPHKLIEGCLLAG
FAMRACAAYIYIRGEFHYEAKVLEQAIDEAYKAGLIGENACGT---

---AYLYLYIHKMTKNVIGSITKNLETVFGTLAKRKSKGENLLDVCFSLPSRGVGNKFAK
MGWTEKDTYWTVTKTKFNSITWRCLVCKFW*tkecry*iilyfpvmsiipctveeemsip
lrelidkhcggviggwdnlkgvipgwfistspskkyl**cfngfr*s*ttqiwfryscsy
syeqrn*ydcsnckii*il*trimwsmypms*rcwmal*yhrsfshw*cqtr*n*ft*rn
**tn*rshhlcfr*ccclastrfn*tf*trn*r*n*tiptq*etitilnclsniiynsii
kiiiiiithqkrnkklininfsplhhkphni**kk


Translated Amino Acid sequence (All Frames)
Frame A:
glleniq*yisfykkkkndefr*sc*igy*infnnrfnrqrfssnqscnifnstsststr
kc*iiwwfeg*rsyfhkfiw*t*rlfkgcyctwrlv*n*kyy**r*rldikrndglwfkr
*rwcwfpirfemefhaknnfkr*ttipchqc**g*twnmqr*rnyetrss*in*rlftcw
fcnesmcsihlysw*isl*sksirtsnr*si*srfnw*kcmry---

---AYLYLYIHKMTKNVIGSITKNLETVFGTLAKRKSKGENLLDVCFSLPSRGVGNKFAK
MGWTEKDTYWTVTKTKFNSITWRCLVCKFW*tkecry*iilyfpvmsiipctveeemsip
lrelidkhcggviggwdnlkgvipgwfistspskkyl**cfngfr*s*ttqiwfryscsy
syeqrn*ydcsnckii*il*trimwsmypms*rcwmal*yhrsfshw*cqtr*n*ft*rn
**tn*rshhlcfr*ccclastrfn*tf*trn*r*n*tiptq*etitilnclsniiynsii
kiiiiiithqkrnkklininfsplhhkphni**kk

Frame B:
AYWKTYNNIYHFTKKRKMMNLGNRVKSVIKLTSTTGLTGKDFQATKVATFSTAQVQQAQE
NVRSYGGLKDKDRIFTNLYGEHDVYLKGAIARGDWYKTKNIIDKGKDWILKEMMASGLRG
RGGAGFPSGLKWSFMPKTTSKDRPQYLVINADEGEPGTCKDREIMRHDPHKLIEGCLLAG
FAMRACAAYIYIRGEFHYEAKVLEQAIDEAYKAGLIGENACGT---

---hiytyiyik*lkt*lvq*qri*kqylel*qkervkvkiy*mfvfhyqvevleinllk
wvglkkihigp*qkqnlivllggawfasfgrpknagtklfcisrscq*shvllkkr*vfh
*en*linivvvslevgit*kvlfqggssvpvlpknicdnvlmdfddlrqhrsglgtaavi
vmnketdmiaaiarlskfykhescgqctpcregvgwlyditdrlvtgnakpdeidsleei
srqieghticalgdaaawpvqglirhfrpeiedrikqfqlnkkqspf*ivylilfiivll
k*****shtknairn*lilifphciinliiynkkk

Frame C:
ptgkhtiiyiilqkkek**i*vivlnrlln*lqqqv*qakifkqpklqhfqqhkfnkhkk
mldhmvv*rikivfsqiymvnmtfi*rvllhveigiklkillikvkigy*kk*wplv*ev
evvlvshqv*ngvscqkqlqkidhntlssmlmrvnlehakiekl*dtilin*lkvvyllv
lq*ehvqhtfifvvnfimkqky*nkqsmkhikqv*lvkmhav---

---ifipiyt*nd*krnwfnnkefrnsiwnfskkke*r*kfirclffitk*rcwk*ic*n
gld*kryildrnknki**yylavlglqvlvdqrmqvlnyfvfpghvnnpmyc*rrdeysi
krin**tlwwchwrlg*lkrcysrvvhqyqsfqkifvimf*wismildntdlv*vqlql*
l*tkkli*lqqlqdylnsintnhvvnvphvvkvldgsmispiv*slvmpnpmklihlkkl
vdklkvtpfvl*vmlllgqykv*ldildqklkielnnsnsirnnhhfklfi*yyl**yy*
nnnnnnhtpktq*ein*y*ffptas*ts*yiikk

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U09595-1 (Contig-U09595-1Q)
/CSM_Contig/Contig-U09595-1Q.Seq.d
(1677 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U09595-1 (Contig-U09595-1Q) /CSM_Contig/Conti... 2866 0.0
Contig-U14028-1 (Contig-U14028-1Q) /CSM_Contig/Conti... 40 0.008
Contig-U12425-1 (Contig-U12425-1Q) /CSM_Contig/Conti... 38 0.030
Contig-U11394-1 (Contig-U11394-1Q) /CSM_Contig/Conti... 38 0.030
Contig-U10110-1 (Contig-U10110-1Q) /CSM_Contig/Conti... 38 0.030
Contig-U03714-1 (Contig-U03714-1Q) /CSM_Contig/Conti... 38 0.030
Contig-U11823-1 (Contig-U11823-1Q) /CSM_Contig/Conti... 36 0.12
Contig-U11702-1 (Contig-U11702-1Q) /CSM_Contig/Conti... 36 0.12
Contig-U11154-1 (Contig-U11154-1Q) /CSM_Contig/Conti... 36 0.12
Contig-U13131-1 (Contig-U13131-1Q) /CSM_Contig/Conti... 32 1.9

>Contig-U09595-1 (Contig-U09595-1Q) /CSM_Contig/Contig-U09595-1Q.Seq.d
Length = 1677

Score = 2866 bits (1446), Expect = 0.0
Identities = 1476/1476 (100%)
Strand = Plus / Plus


Query: 54 tgatgaatttaggtaatcgtgttaaatcggttattaaattaacttcaacaacaggtttaa 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 tgatgaatttaggtaatcgtgttaaatcggttattaaattaacttcaacaacaggtttaa 113


Query: 114 caggcaaagattttcaagcaaccaaagttgcaacattttcaacagcacaagttcaacaag 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 caggcaaagattttcaagcaaccaaagttgcaacattttcaacagcacaagttcaacaag 173


Query: 174 cacaagaaaatgttagatcatatggtggtttgaaggataaagatcgtattttcacaaatt 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 cacaagaaaatgttagatcatatggtggtttgaaggataaagatcgtattttcacaaatt 233


Query: 234 tatatggtgaacatgacgtttatttaaagggtgctattgcacgtggagattggtataaaa 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 tatatggtgaacatgacgtttatttaaagggtgctattgcacgtggagattggtataaaa 293


Query: 294 ctaaaaatattattgataaaggtaaagattggatattaaaagaaatgatggcctctggtt 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ctaaaaatattattgataaaggtaaagattggatattaaaagaaatgatggcctctggtt 353


Query: 354 taagaggtagaggtggtgctggtttcccatcaggtttgaaatggagtttcatgccaaaaa 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 taagaggtagaggtggtgctggtttcccatcaggtttgaaatggagtttcatgccaaaaa 413


Query: 414 caacttcaaaagatagaccacaataccttgtcatcaatgctgatgagggtgaacctggaa 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 caacttcaaaagatagaccacaataccttgtcatcaatgctgatgagggtgaacctggaa 473


Query: 474 catgcaaagatagagaaattatgagacacgatcctcataaattaattgaaggttgtttac 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 catgcaaagatagagaaattatgagacacgatcctcataaattaattgaaggttgtttac 533


Query: 534 ttgctggttttgcaatgagagcatgtgcagcatacatttatattcgtggtgaatttcatt 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ttgctggttttgcaatgagagcatgtgcagcatacatttatattcgtggtgaatttcatt 593


Query: 594 atgaagcaaaagtattagaacaagcaatcgatgaagcatataaagcaggtttaattggtg 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 atgaagcaaaagtattagaacaagcaatcgatgaagcatataaagcaggtttaattggtg 653


Query: 654 aaaatgcatgcggtacannnnnnnnnngcatatttatacctatatatacataaaatgact 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 aaaatgcatgcggtacannnnnnnnnngcatatttatacctatatatacataaaatgact 713


Query: 714 aaaaacgtaattggttcaataacaaagaatttagaaacagtatttggaactttagcaaaa 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 aaaaacgtaattggttcaataacaaagaatttagaaacagtatttggaactttagcaaaa 773


Query: 774 agaaagagtaaaggtgaaaatttattagatgtttgtttttcattaccaagtagaggtgtt 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 agaaagagtaaaggtgaaaatttattagatgtttgtttttcattaccaagtagaggtgtt 833


Query: 834 ggaaataaatttgctaaaatgggttggactgaaaaagatacatattggaccgtaacaaaa 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 ggaaataaatttgctaaaatgggttggactgaaaaagatacatattggaccgtaacaaaa 893


Query: 894 acaaaatttaatagtattacttggcggtgcttggtttgcaagttttggtagaccaaagaa 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 acaaaatttaatagtattacttggcggtgcttggtttgcaagttttggtagaccaaagaa 953


Query: 954 tgcaggtactaaattattttgtatttcccggtcatgtcaataatcccatgtactgttgaa 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 tgcaggtactaaattattttgtatttcccggtcatgtcaataatcccatgtactgttgaa 1013


Query: 1014 gaagagatgagtattccattaagagaattaattgataaacattgtggtggtgtcattgga 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 gaagagatgagtattccattaagagaattaattgataaacattgtggtggtgtcattgga 1073


Query: 1074 ggttgggataacttaaaaggtgttattccagggtggttcatcagtaccagtccttccaaa 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1074 ggttgggataacttaaaaggtgttattccagggtggttcatcagtaccagtccttccaaa 1133


Query: 1134 aaatatttgtgataatgttttaatggatttcgatgatcttagacaacacagatctggttt 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1134 aaatatttgtgataatgttttaatggatttcgatgatcttagacaacacagatctggttt 1193


Query: 1194 aggtacagctgcagttatagttatgaacaaagaaactgatatgattgcagcaattgcaag 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1194 aggtacagctgcagttatagttatgaacaaagaaactgatatgattgcagcaattgcaag 1253


Query: 1254 attatctaaattctataaacacgaatcatgtggtcaatgtaccccatgtcgtgaaggtgt 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1254 attatctaaattctataaacacgaatcatgtggtcaatgtaccccatgtcgtgaaggtgt 1313


Query: 1314 tggatggctctatgatatcaccgatcgtttagtcactggtaatgccaaacccgatgaaat 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1314 tggatggctctatgatatcaccgatcgtttagtcactggtaatgccaaacccgatgaaat 1373


Query: 1374 tgattcacttgaagaaattagtagacaaattgaaggtcacaccatttgtgctttaggtga 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1374 tgattcacttgaagaaattagtagacaaattgaaggtcacaccatttgtgctttaggtga 1433


Query: 1434 tgctgctgcttggccagtacaaggtttaattagacattttagaccagaaattgaagatag 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1434 tgctgctgcttggccagtacaaggtttaattagacattttagaccagaaattgaagatag 1493


Query: 1494 aattaaacaattccaactcaataagaaacaatcacc 1529
||||||||||||||||||||||||||||||||||||
Sbjct: 1494 aattaaacaattccaactcaataagaaacaatcacc 1529


Score = 153 bits (77), Expect = 7e-37
Identities = 77/77 (100%)
Strand = Plus / Plus


Query: 1592 cacacaccaaaaacgcaataagaaattaattaatattaatttttccccactgcatcataa 1651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1592 cacacaccaaaaacgcaataagaaattaattaatattaatttttccccactgcatcataa 1651


Query: 1652 acctcataatatataat 1668
|||||||||||||||||
Sbjct: 1652 acctcataatatataat 1668


Score = 77.8 bits (39), Expect = 4e-14
Identities = 39/39 (100%)
Strand = Plus / Plus


Query: 1 ggcctactggaaaacatacaataatatatatcattttac 39
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcctactggaaaacatacaataatatatatcattttac 39


>Contig-U14028-1 (Contig-U14028-1Q) /CSM_Contig/Contig-U14028-1Q.Seq.d
Length = 729

Score = 40.1 bits (20), Expect = 0.008
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 146 acattttcaacagcacaagt 165
||||||||||||||||||||
Sbjct: 61 acattttcaacagcacaagt 80


>Contig-U12425-1 (Contig-U12425-1Q) /CSM_Contig/Contig-U12425-1Q.Seq.d
Length = 1669

Score = 38.2 bits (19), Expect = 0.030
Identities = 22/23 (95%)
Strand = Plus / Plus


Query: 1611 aagaaattaattaatattaattt 1633
|||||||||||||||| ||||||
Sbjct: 711 aagaaattaattaatagtaattt 733


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 21,165
Number of Sequences: 6905
Number of extensions: 21165
Number of successful extensions: 2493
Number of sequences better than 10.0: 235
length of query: 1677
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1661
effective length of database: 5,564,391
effective search space: 9242453451
effective search space used: 9242453451
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.16
Homology vs DNA
Query= Contig-U09595-1 (Contig-U09595-1Q) /CSM_Contig/Contig-U09595-1Q.Seq.d
(1677 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ414455) Dictyostelium discoideum cDNA clone:ddv19p05, 5' ... 1223 0.0 2
(U61989) Dictyostelium discoideum QinA (qinA) mRNA, complete... 1207 0.0 2
(BJ414971) Dictyostelium discoideum cDNA clone:ddv21d05, 5' ... 1035 0.0 2
(BJ433185) Dictyostelium discoideum cDNA clone:ddv21d05, 3' ... 842 0.0 2
(BJ433016) Dictyostelium discoideum cDNA clone:ddv20d13, 3' ... 842 0.0 2
(AU267453) Dictyostelium discoideum vegetative cDNA clone:VS... 991 0.0 2
(BJ432618) Dictyostelium discoideum cDNA clone:ddv19p05, 3' ... 749 0.0 4
(BJ414823) Dictyostelium discoideum cDNA clone:ddv20d13, 5' ... 936 0.0 2
(BJ430634) Dictyostelium discoideum cDNA clone:ddv8f05, 3' e... 902 0.0 1
(BJ417369) Dictyostelium discoideum cDNA clone:ddv30j11, 5' ... 846 0.0 2
(AU267208) Dictyostelium discoideum vegetative cDNA clone:VS... 842 0.0 2
(AU267452) Dictyostelium discoideum vegetative cDNA clone:VS... 595 0.0 4
(BJ431093) Dictyostelium discoideum cDNA clone:ddv9h21, 3' e... 831 0.0 2
(AU267207) Dictyostelium discoideum vegetative cDNA clone:VS... 672 0.0 2
(BJ429214) Dictyostelium discoideum cDNA clone:ddv2a20, 3' e... 656 0.0 1
(AU267946) Dictyostelium discoideum vegetative cDNA clone:VS... 462 e-125 1
(BJ412784) Dictyostelium discoideum cDNA clone:ddv9h21, 5' e... 367 9e-97 1
(AU270108) Dictyostelium discoideum vegetative cDNA clone:VS... 283 2e-85 2
(AU267945) Dictyostelium discoideum vegetative cDNA clone:VS... 321 5e-83 1
(AF399714) Candida tropicalis NADH dehydrogenase complex I 5... 90 4e-82 12
(AU270109) Dictyostelium discoideum vegetative cDNA clone:VS... 283 1e-71 1
(DN795922) MVSG234 S.sclerotiorum lambda phage ESTs Library ... 92 3e-45 7
(DW118685) CLRY731.b1_F16.ab1 CLR(XYZ) lettuce serriola Lact... 107 3e-44 6
(BJ409832) Dictyostelium discoideum cDNA clone:ddv10n04, 5' ... 163 1e-43 2
(EK282106) 1095462299136 Global-Ocean-Sampling_GS-31-01-01-1... 94 7e-39 7
(CR382138) Debaryomyces hansenii chromosome F of strain CBS7... 72 3e-38 18
(EL908602) INIT2_26_C02.b1_A006 G5 trophont cDNA (INIT2) Ich... 82 7e-38 5
(EL908681) INIT2_26_C02.g1_A006 G5 trophont cDNA (INIT2) Ich... 82 5e-36 5
(EL916019) INIT2_98_D02.g1_A006 G5 trophont cDNA (INIT2) Ich... 82 6e-36 5
(DY889661) CeleSEQ11619 Cunninghamella elegans pBluescript (... 68 3e-34 6
(EL914806) INIT2_82_F07.g2_A006 G5 trophont cDNA (INIT2) Ich... 82 6e-34 5
(DY886109) CeleSEQ1632 Cunninghamella elegans pBluescript (E... 68 8e-34 6
(FC813195) Sr_pASP6_013g16_SP6 S. ratti mixed stage pAMP Str... 84 2e-32 4
(AY813376) Schistosoma japonicum SJCHGC01665 protein mRNA, c... 54 2e-32 7
(FC811112) Sr_pASP6_06i17_SP6 S. ratti mixed stage pAMP Stro... 84 4e-32 4
(EL913115) INIT2_56_F01.g2_A006 G5 trophont cDNA (INIT2) Ich... 100 7e-32 3
(FG150909) AGN_RNC112xf18r1.ab1 AGN_RNC Nicotiana tabacum cD... 64 9e-32 6
(EL915728) INIT2_94_E07.g2_A006 G5 trophont cDNA (INIT2) Ich... 100 9e-32 3
(AR545094) Sequence 225 from patent US 6747137. 88 4e-31 3
(CD080617) MA3-9999U-M312-H11-U.B MA3-0001 Schistosoma manso... 100 1e-30 3
(FE249013) CAPH2033.rev CAPH Naegleria gruberi amoeba stage ... 100 2e-30 5
(FE238070) CAPG4676.rev CAPG Naegleria gruberi amoeba stage ... 100 2e-30 5
(FE261743) CAZO2195.rev CAZO Naegleria gruberi Flagellate St... 100 2e-30 5
(FE256108) CAPH5944.rev CAPH Naegleria gruberi amoeba stage ... 100 3e-30 5
(FE239763) CAPG5527.rev CAPG Naegleria gruberi amoeba stage ... 100 3e-30 5
(AY608636) Euplotes sp. BB-2004 hydrogenosomal NADH dehydrog... 74 3e-30 4
(FE235487) CAPG3387.rev CAPG Naegleria gruberi amoeba stage ... 100 4e-30 5
(FE241577) CAPG6753.rev CAPG Naegleria gruberi amoeba stage ... 100 5e-30 5
(DY894439) CeleSEQ14014 Cunninghamella elegans pBluescript (... 68 3e-29 6
(EL923380) NY4Th2_99_A09.b1_A039 NY4 theronts Ichthyophthiri... 82 3e-29 5
(BJ871554) Marchantia polymorpha cDNA clone:lwb4h20, 5' end. 86 3e-28 4
(FE233554) CAPG2346.rev CAPG Naegleria gruberi amoeba stage ... 92 4e-28 5
(EX477981) EST_lsal_evj_798772 lsalevj mixed_tissue_mixed_st... 80 2e-27 3
(AR545093) Sequence 224 from patent US 6747137. 82 3e-27 4
(X83999) S.tuberosum mRNA for NADH dehydrogenase, NADH-bindi... 72 5e-27 5
(EJ214218) 1092351036390 Global-Ocean-Sampling_GS-27-01-01-1... 62 3e-26 6
(CX633664) taj42a02.y3 Hydra EST UCI 5 Hydra magnipapillata ... 101 2e-25 3
(CV182787) tai88d09.y1 Hydra EST UCI 5 ALP Hydra magnipapill... 101 3e-25 3
(EJ370367) 1092963722483 Global-Ocean-Sampling_GS-28-01-01-1... 86 5e-25 2
(CZ540280) SRAA-aad30g04.g1 Strongyloides ratti whole genome... 84 1e-24 4
(EJ507842) 1095407013237 Global-Ocean-Sampling_GS-28-01-01-1... 78 1e-24 4
(EU752528) Populus tremula isolate swl3-95 esterase/lipase/t... 58 4e-24 4
(EU752526) Populus tremula isolate swl3-85 esterase/lipase/t... 58 4e-24 4
(EU752523) Populus tremula isolate swl3-76 esterase/lipase/t... 58 4e-24 4
(EU752520) Populus tremula isolate swl3-75 esterase/lipase/t... 58 4e-24 4
(EU752515) Populus tremula isolate swl3-43 esterase/lipase/t... 58 4e-24 4
(EU752514) Populus tremula isolate swl3-43 esterase/lipase/t... 58 4e-24 4
(EU752513) Populus tremula isolate swl3-31 esterase/lipase/t... 58 4e-24 4
(EU752512) Populus tremula isolate swl3-31 esterase/lipase/t... 58 4e-24 4
(EU752511) Populus tremula isolate swl3-3 esterase/lipase/th... 58 4e-24 4
(EU752510) Populus tremula isolate swl3-3 esterase/lipase/th... 58 4e-24 4
(EU752508) Populus tremula isolate swl3-24 esterase/lipase/t... 58 4e-24 4
(EU752507) Populus tremula isolate swl3-16 esterase/lipase/t... 58 4e-24 4
(EU752501) Populus tremula isolate swl3-104 esterase/lipase/... 58 4e-24 4
(EU752500) Populus tremula isolate swl3-104 esterase/lipase/... 58 4e-24 4
(FG127021) LY_YIT_BG1617 German Cockroach Whole Organism cDN... 88 5e-24 4
(EK121481) 1092963529176 Global-Ocean-Sampling_GS-31-01-01-1... 62 5e-24 5
(CT739144) Paramecium tetraurelia 5-PRIME EST from clone LK0... 60 1e-23 6
(AY608632) Nyctotherus ovalis from Blaberus sp. var. Amsterd... 68 2e-23 6
(CX830394) ACAC-aaa28b02.g1 Hydra EST UCI 7 Hydra magnipapil... 101 4e-23 3
(AC215467) Solanum lycopersicum chromosome 2 clone C02SLe012... 80 4e-23 5
(EU752535) Populus tremula isolate swl3-fra17 esterase/lipas... 58 5e-23 4
(EU752534) Populus tremula isolate swl3-fra17 esterase/lipas... 58 5e-23 4
(EU752533) Populus tremula isolate swl3-aut64 esterase/lipas... 58 5e-23 4
(EU752532) Populus tremula isolate swl3-aut64 esterase/lipas... 58 5e-23 4
(EU752527) Populus tremula isolate swl3-85 esterase/lipase/t... 58 5e-23 4
(EU752524) Populus tremula isolate swl3-84 esterase/lipase/t... 58 5e-23 4
(EU752522) Populus tremula isolate swl3-76 esterase/lipase/t... 58 5e-23 4
(EU752521) Populus tremula isolate swl3-75 esterase/lipase/t... 58 5e-23 4
(EU752519) Populus tremula isolate swl3-63 esterase/lipase/t... 58 5e-23 4
(EU752518) Populus tremula isolate swl3-63 esterase/lipase/t... 58 5e-23 4
(EU752517) Populus tremula isolate swl3-54 esterase/lipase/t... 58 5e-23 4
(EU752516) Populus tremula isolate swl3-54 esterase/lipase/t... 58 5e-23 4
(EU752509) Populus tremula isolate swl3-24 esterase/lipase/t... 58 5e-23 4
(EU752506) Populus tremula isolate swl3-16 esterase/lipase/t... 58 5e-23 4
(EU752505) Populus tremula isolate swl3-14 esterase/lipase/t... 58 5e-23 4
(EU752504) Populus tremula isolate swl3-14 esterase/lipase/t... 58 5e-23 4
(EU752503) Populus tremula isolate swl3-114 esterase/lipase/... 58 5e-23 4
(EU752502) Populus tremula isolate swl3-114 esterase/lipase/... 58 5e-23 4
(CN566598) taf99b12.x1 Hydra EST -Kiel 1 Hydra magnipapillat... 109 6e-23 3

>(BJ414455) Dictyostelium discoideum cDNA clone:ddv19p05, 5' end,
single read.
Length = 660

Score = 1223 bits (617), Expect(2) = 0.0
Identities = 617/617 (100%)
Strand = Plus / Plus


Query: 54 tgatgaatttaggtaatcgtgttaaatcggttattaaattaacttcaacaacaggtttaa 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 tgatgaatttaggtaatcgtgttaaatcggttattaaattaacttcaacaacaggtttaa 103


Query: 114 caggcaaagattttcaagcaaccaaagttgcaacattttcaacagcacaagttcaacaag 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 caggcaaagattttcaagcaaccaaagttgcaacattttcaacagcacaagttcaacaag 163


Query: 174 cacaagaaaatgttagatcatatggtggtttgaaggataaagatcgtattttcacaaatt 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 cacaagaaaatgttagatcatatggtggtttgaaggataaagatcgtattttcacaaatt 223


Query: 234 tatatggtgaacatgacgtttatttaaagggtgctattgcacgtggagattggtataaaa 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tatatggtgaacatgacgtttatttaaagggtgctattgcacgtggagattggtataaaa 283


Query: 294 ctaaaaatattattgataaaggtaaagattggatattaaaagaaatgatggcctctggtt 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ctaaaaatattattgataaaggtaaagattggatattaaaagaaatgatggcctctggtt 343


Query: 354 taagaggtagaggtggtgctggtttcccatcaggtttgaaatggagtttcatgccaaaaa 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 taagaggtagaggtggtgctggtttcccatcaggtttgaaatggagtttcatgccaaaaa 403


Query: 414 caacttcaaaagatagaccacaataccttgtcatcaatgctgatgagggtgaacctggaa 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 caacttcaaaagatagaccacaataccttgtcatcaatgctgatgagggtgaacctggaa 463


Query: 474 catgcaaagatagagaaattatgagacacgatcctcataaattaattgaaggttgtttac 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 catgcaaagatagagaaattatgagacacgatcctcataaattaattgaaggttgtttac 523


Query: 534 ttgctggttttgcaatgagagcatgtgcagcatacatttatattcgtggtgaatttcatt 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ttgctggttttgcaatgagagcatgtgcagcatacatttatattcgtggtgaatttcatt 583


Query: 594 atgaagcaaaagtattagaacaagcaatcgatgaagcatataaagcaggtttaattggtg 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 atgaagcaaaagtattagaacaagcaatcgatgaagcatataaagcaggtttaattggtg 643


Query: 654 aaaatgcatgcggtaca 670
|||||||||||||||||
Sbjct: 644 aaaatgcatgcggtaca 660

Score = 50.1 bits (25), Expect(2) = 0.0
Identities = 28/29 (96%)
Strand = Plus / Plus


Query: 11 aaaacatacaataatatatatcattttac 39
||||||||||||||||||||| |||||||
Sbjct: 1 aaaacatacaataatatatataattttac 29

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,926,591,736
Number of extensions: 118961485
Number of successful extensions: 10047815
Number of sequences better than 10.0: 3214
Length of query: 1677
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1653
Effective length of database: 97,308,875,965
Effective search space: 160851571970145
Effective search space used: 160851571970145
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.26
Homology vs Protein
Query= Contig-U09595-1 (Contig-U09595-1Q) /CSM_Contig/Contig-U09595-1Q.Seq.d
(1677 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

U61989_1(U61989|pid:none) Dictyostelium discoideum ndufv1 (ndufv... 421 e-116
S52261(S52261) NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) fla... 259 2e-67
EU306858_1(EU306858|pid:none) Drosophila silvestris clone sv3E-M... 203 1e-66
CR954215_50(CR954215|pid:none) Ostreococcus tauri strain OTTH059... 251 7e-65
EU960708_1(EU960708|pid:none) Zea mays clone 227779 NADH-ubiquin... 250 9e-65
(Q91YT0) RecName: Full=NADH dehydrogenase [ubiquinone] flavoprot... 250 1e-64
AM486822_1(AM486822|pid:none) Vitis vinifera contig VV78X177049.... 249 2e-64
BT039286_1(BT039286|pid:none) Zea mays full-length cDNA clone ZM... 249 2e-64
BT040380_1(BT040380|pid:none) Zea mays full-length cDNA clone ZM... 249 2e-64
AM270079_6(AM270079|pid:none) Aspergillus niger contig An04c0180... 249 2e-64
(Q92406) RecName: Full=NADH-ubiquinone oxidoreductase 51 kDa sub... 248 5e-64
T19160(T19160) hypothetical protein C09H10.3 - Caenorhabditis el... 248 5e-64
AM920437_672(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 248 5e-64
AB303966_1(AB303966|pid:none) Macaca fascicularis NDUFV1 mRNA fo... 248 6e-64
AJ852424_1(AJ852424|pid:none) Nilaparvata lugens gene for NADH-q... 248 6e-64
(Q8HXQ9) RecName: Full=NADH dehydrogenase [ubiquinone] flavoprot... 248 6e-64
(Q0MQI4) RecName: Full=NADH dehydrogenase [ubiquinone] flavoprot... 248 6e-64
BC078648_1(BC078648|pid:none) Danio rerio NADH dehydrogenase (ub... 248 6e-64
BT054535_1(BT054535|pid:none) Zea mays full-length cDNA clone ZM... 247 8e-64
EU752525_1(EU752525|pid:none) Populus tremula isolate swl3-84 es... 247 1e-63
AY084155_1(AY084155|pid:none) Drosophila melanogaster RE33648 fu... 247 1e-63
AK065185_1(AK065185|pid:none) Oryza sativa Japonica Group cDNA c... 247 1e-63
(Q0MQI6) RecName: Full=NADH dehydrogenase [ubiquinone] flavoprot... 247 1e-63
(P49821) RecName: Full=NADH dehydrogenase [ubiquinone] flavoprot... 246 1e-63
AB006697_9(AB006697|pid:none) Arabidopsis thaliana genomic DNA, ... 246 1e-63
Y17379_1(Y17379|pid:none) Homo sapiens NDUFV1 gene, exon 1 and j... 246 1e-63
FN319631_1(FN319631|pid:none) Schistosoma japonicum isolate Anhu... 246 2e-63
FN314785_1(FN314785|pid:none) Schistosoma japonicum isolate Anhu... 246 2e-63
BC110120_1(BC110120|pid:none) Danio rerio zgc:123290, mRNA (cDNA... 246 2e-63
(P25708) RecName: Full=NADH dehydrogenase [ubiquinone] flavoprot... 246 2e-63
M58607_1(M58607|pid:none) Bovine mitochondrial NADH-ubiquinone r... 246 2e-63
BC083709_1(BC083709|pid:none) Rattus norvegicus NADH dehydrogena... 245 3e-63
AP007155_967(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 245 4e-63
FN319630_1(FN319630|pid:none) Schistosoma japonicum isolate Anhu... 244 5e-63
EU752506_1(EU752506|pid:none) Populus tremula isolate swl3-16 es... 244 5e-63
BT075748_1(BT075748|pid:none) Osmerus mordax clone omor-rgc-505-... 244 7e-63
AY347479_1(AY347479|pid:none) Chlamydomonas reinhardtii NADH:ubi... 244 7e-63
BT041409_1(BT041409|pid:none) Zea mays full-length cDNA clone ZM... 243 2e-62
BT078382_1(BT078382|pid:none) Lepeophtheirus salmonis clone lsal... 243 2e-62
CP000394_1297(CP000394|pid:none) Granulibacter bethesdensis CGDN... 242 3e-62
BT045225_1(BT045225|pid:none) Salmo salar clone ssal-rgf-515-298... 240 1e-61
EU306852_1(EU306852|pid:none) Drosophila silvestris clone sv3E-K... 240 1e-61
AY608636_1(AY608636|pid:none) Euplotes sp. BB-2004 hydrogenosoma... 239 2e-61
CU633895_307(CU633895|pid:none) Podospora anserina genomic DNA c... 237 8e-61
CP001142_194(CP001142|pid:none) Phaeodactylum tricornutum CCAP 1... 236 2e-60
AF197536_1(AF197536|pid:none) Yarrowia lipolytica nucleotide-bin... 234 5e-60
AM502223_99(AM502223|pid:none) Leishmania infantum chromosome 5. 234 9e-60
FN392320_1194(FN392320|pid:none) Pichia pastoris GS115 chromosom... 233 2e-59
AE013599_2677(AE013599|pid:none) Drosophila melanogaster chromos... 232 3e-59
AF399714_1(AF399714|pid:none) Candida tropicalis NADH dehydrogen... 232 3e-59
FM160648_29(FM160648|pid:none) Trypanosoma brucei TREU927 BAC26D... 232 3e-59
CP000031_2711(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple... 229 2e-58
CP000872_780(CP000872|pid:none) Brucella canis ATCC 23365 chromo... 229 3e-58
CP000498_546(CP000498|pid:none) Pichia stipitis CBS 6054 chromos... 228 4e-58
CP000362_3051(CP000362|pid:none) Roseobacter denitrificans OCh 1... 228 7e-58
CP000708_736(CP000708|pid:none) Brucella ovis ATCC 25840 chromos... 227 9e-58
AE014291_782(AE014291|pid:none) Brucella suis 1330 chromosome I,... 227 1e-57
CP000633_1264(CP000633|pid:none) Agrobacterium vitis S4 chromoso... 226 2e-57
AC3396(AC3396) NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) [im... 226 2e-57
CP000390_1019(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 225 3e-57
BA000040_4912(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 225 4e-57
EU752532_1(EU752532|pid:none) Populus tremula isolate swl3-aut64... 225 4e-57
CU459003_2373(CU459003|pid:none) Magnetospirillum gryphiswaldens... 224 6e-57
CP000628_1385(CP000628|pid:none) Agrobacterium radiobacter K84 c... 224 7e-57
AM999887_1003(AM999887|pid:none) Wolbachia endosymbiont of Culex... 224 7e-57
CP001016_2346(CP001016|pid:none) Beijerinckia indica subsp. indi... 224 9e-57
CU234118_3958(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 223 2e-56
CP000157_1330(CP000157|pid:none) Erythrobacter litoralis HTCC259... 223 2e-56
EU752531_1(EU752531|pid:none) Populus tremula isolate swl3-aut63... 223 2e-56
AM236080_1713(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 222 3e-56
AK293522_1(AK293522|pid:none) Homo sapiens cDNA FLJ57949 complet... 222 3e-56
BC007619_1(BC007619|pid:none) Homo sapiens, clone IMAGE:3355366,... 222 3e-56
AK300726_1(AK300726|pid:none) Homo sapiens cDNA FLJ57201 complet... 222 3e-56
CP001191_1256(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 222 4e-56
(A8EXI1) RecName: Full=NADH-quinone oxidoreductase subunit F; ... 222 4e-56
CP000158_1719(CP000158|pid:none) Hyphomonas neptunium ATCC 15444... 221 5e-56
(Q9ZE33) RecName: Full=NADH-quinone oxidoreductase subunit F; ... 221 6e-56
CP000697_916(CP000697|pid:none) Acidiphilium cryptum JF-5, compl... 221 6e-56
CP000781_4589(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 221 8e-56
BX572602_176(BX572602|pid:none) Rhodopseudomonas palustris CGA00... 221 8e-56
CP000699_2966(CP000699|pid:none) Sphingomonas wittichii RW1, com... 220 1e-55
CP000133_1586(CP000133|pid:none) Rhizobium etli CFN 42, complete... 220 1e-55
CP001389_1036(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 220 1e-55
CP000250_2570(CP000250|pid:none) Rhodopseudomonas palustris HaA2... 220 1e-55
(P56912) RecName: Full=NADH-quinone oxidoreductase subunit F 1; ... 220 1e-55
CP000356_1293(CP000356|pid:none) Sphingopyxis alaskensis RB2256,... 219 2e-55
CP001391_771(CP001391|pid:none) Wolbachia sp. wRi, complete geno... 219 3e-55
(Q4UKA6) RecName: Full=NADH-quinone oxidoreductase subunit F; ... 218 5e-55
CP000107_472(CP000107|pid:none) Ehrlichia canis str. Jake, compl... 217 1e-54
(A8F0M0) RecName: Full=NADH-quinone oxidoreductase subunit F; ... 217 1e-54
BX897699_870(BX897699|pid:none) Bartonella henselae strain Houst... 216 2e-54
AM494475_1632(AM494475|pid:none) Orientia tsutsugamushi Boryong ... 216 2e-54
BA000012_1073(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 216 3e-54
CP000115_1874(CP000115|pid:none) Nitrobacter winogradskyi Nb-255... 215 3e-54
CP000524_736(CP000524|pid:none) Bartonella bacilliformis KC583, ... 215 3e-54
AE017321_470(AE017321|pid:none) Wolbachia endosymbiont strain TR... 215 3e-54
AP008981_916(AP008981|pid:none) Orientia tsutsugamushi str. Iked... 215 3e-54
CP000830_1309(CP000830|pid:none) Dinoroseobacter shibae DFL 12, ... 215 4e-54
CP000377_748(CP000377|pid:none) Silicibacter sp. TM1040, complet... 214 6e-54
CP000577_1170(CP000577|pid:none) Rhodobacter sphaeroides ATCC 17... 214 1e-53
(A8GYE0) RecName: Full=NADH-quinone oxidoreductase subunit F; ... 214 1e-53
(Q92JB2) RecName: Full=NADH-quinone oxidoreductase subunit F; ... 213 1e-53
CR925677_493(CR925677|pid:none) Ehrlichia ruminantium str. Garde... 213 1e-53
CR767821_501(CR767821|pid:none) Ehrlichia ruminantium strain Wel... 213 1e-53
CR925678_503(CR925678|pid:none) Ehrlichia ruminantium str. Welge... 213 1e-53
CP001612_123(CP001612|pid:none) Rickettsia africae ESF-5, comple... 213 1e-53
(A8GQT6) RecName: Full=NADH-quinone oxidoreductase subunit F; ... 211 5e-53
CP000661_1980(CP000661|pid:none) Rhodobacter sphaeroides ATCC 17... 211 6e-53
CP001029_994(CP001029|pid:none) Methylobacterium populi BJ001, c... 211 8e-53
AM260525_1077(AM260525|pid:none) Bartonella tribocorum CIP 10547... 210 1e-52
CP000489_2218(CP000489|pid:none) Paracoccus denitrificans PD1222... 210 1e-52
CP000264_1179(CP000264|pid:none) Jannaschia sp. CCS1, complete g... 210 1e-52
CP001349_3957(CP001349|pid:none) Methylobacterium nodulans ORS 2... 209 2e-52
CP000943_4149(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 209 2e-52
FN357308_35(FN357308|pid:none) Schistosoma mansoni genome sequen... 208 4e-52
CP000235_398(CP000235|pid:none) Anaplasma phagocytophilum HZ, co... 205 3e-51
FN319632_1(FN319632|pid:none) Schistosoma japonicum isolate Anhu... 202 3e-50
CP000084_878(CP000084|pid:none) Candidatus Pelagibacter ubique H... 197 1e-48
AM697700_1(AM697700|pid:none) Platynereis dumerilii partial mRNA... 191 7e-47
CP000237_687(CP000237|pid:none) Neorickettsia sennetsu strain Mi... 187 8e-46
CP001339_974(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, c... 166 2e-39
CP000471_3586(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 166 2e-39
AE016828_1247(AE016828|pid:none) Coxiella burnetii RSA 493, comp... 165 5e-39
S67973_1(S67973|pid:none) NDUFV1=NADH:ubiquinone oxidoreductase ... 164 9e-39
AE017354_2726(AE017354|pid:none) Legionella pneumophila subsp. p... 162 4e-38
CP000675_2957(CP000675|pid:none) Legionella pneumophila str. Cor... 162 4e-38
DQ062237_1(DQ062237|pid:none) Lysiphlebus testaceipes NADH dehyd... 161 6e-38
AY123091_1(AY123091|pid:none) Griffithsia japonica NADH dehydrog... 160 1e-37
CP000884_5157(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 160 1e-37
CP000116_1147(CP000116|pid:none) Thiobacillus denitrificans ATCC... 158 5e-37
CP000512_1241(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 156 2e-36
CP000316_3198(CP000316|pid:none) Polaromonas sp. JS666, complete... 156 2e-36
CP000937_934(CP000937|pid:none) Francisella philomiragia subsp. ... 153 2e-35
CR555306_2744(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 153 2e-35
CP000544_1729(CP000544|pid:none) Halorhodospira halophila SL1, c... 153 2e-35
AY089293_1(AY089293|pid:none) Drosophila melanogaster AT08706 fu... 152 4e-35
AE013599_2144(AE013599|pid:none) Drosophila melanogaster chromos... 152 4e-35
AM421808_230(AM421808|pid:none) Neisseria meningitidis serogroup... 151 6e-35
CP001154_529(CP001154|pid:none) Laribacter hongkongensis HLHK9, ... 151 8e-35
AE002098_234(AE002098|pid:none) Neisseria meningitidis MC58, com... 151 8e-35
BX640413_161(BX640413|pid:none) Bordetella pertussis strain Toha... 150 1e-34
AL157959_13(AL157959|pid:none) Neisseria meningitidis serogroup ... 150 1e-34
AE004969_1594(AE004969|pid:none) Neisseria gonorrhoeae FA 1090, ... 150 2e-34
CP000103_1090(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 150 2e-34
CP000529_1416(CP000529|pid:none) Polaromonas naphthalenivorans C... 150 2e-34
CP000127_2459(CP000127|pid:none) Nitrosococcus oceani ATCC 19707... 149 2e-34
CP000267_1469(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 149 2e-34
CP000803_1930(CP000803|pid:none) Francisella tularensis subsp. h... 149 3e-34
AM233362_1824(AM233362|pid:none) Francisella tularensis subsp. h... 149 3e-34
CP001392_866(CP001392|pid:none) Diaphorobacter sp. TPSY, complet... 149 4e-34
CP000608_82(CP000608|pid:none) Francisella tularensis subsp. tul... 149 4e-34
CP000381_1807(CP000381|pid:none) Neisseria meningitidis 053442, ... 148 5e-34
CP001010_699(CP001010|pid:none) Polynucleobacter necessarius sub... 147 9e-34
CP000539_946(CP000539|pid:none) Acidovorax sp. JS42, complete ge... 147 9e-34
CP000542_2753(CP000542|pid:none) Verminephrobacter eiseniae EF01... 147 1e-33
CP000488_220(CP000488|pid:none) Candidatus Ruthia magnifica str.... 145 3e-33
CP001100_1989(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 145 4e-33
CP000360_1308(CP000360|pid:none) Acidobacteria bacterium Ellin34... 144 1e-32
CP000941_243(CP000941|pid:none) Xylella fastidiosa M12, complete... 144 1e-32
CP000850_4296(CP000850|pid:none) Salinispora arenicola CNS-205, ... 144 1e-32
AE003849_308(AE003849|pid:none) Xylella fastidiosa 9a5c, complet... 144 1e-32
CP000916_458(CP000916|pid:none) Thermotoga neapolitana DSM 4359,... 143 2e-32
CP001132_2193(CP001132|pid:none) Acidithiobacillus ferrooxidans ... 143 2e-32
CP001013_1498(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 143 2e-32
CP000284_2052(CP000284|pid:none) Methylobacillus flagellatus KT,... 142 4e-32
CP000450_894(CP000450|pid:none) Nitrosomonas eutropha C91, compl... 142 4e-32
CP001472_281(CP001472|pid:none) Acidobacterium capsulatum ATCC 5... 141 8e-32
AE013598_3159(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 141 8e-32
AE008922_2477(AE008922|pid:none) Xanthomonas campestris pv. camp... 141 8e-32
AM920689_1660(AM920689|pid:none) Xanthomonas campestris pv. camp... 141 8e-32
AE000512_225(AE000512|pid:none) Thermotoga maritima MSB8, comple... 140 1e-31
CP000667_4005(CP000667|pid:none) Salinispora tropica CNB-440, co... 140 1e-31
CP000702_687(CP000702|pid:none) Thermotoga petrophila RKU-1, com... 140 1e-31
CP001052_1310(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 140 1e-31
AE017221_1909(AE017221|pid:none) Thermus thermophilus HB27, comp... 140 2e-31
(Q56222) RecName: Full=NADH-quinone oxidoreductase subunit 1; ... 140 2e-31
AM743169_3210(AM743169|pid:none) Stenotrophomonas maltophilia K2... 140 2e-31
CP001111_2821(CP001111|pid:none) Stenotrophomonas maltophilia R5... 140 2e-31
CP000969_711(CP000969|pid:none) Thermotoga sp. RQ2, complete gen... 139 2e-31
AL646052_2056(AL646052|pid:none) Ralstonia solanacearum GMI1000 ... 139 3e-31
CP001114_554(CP001114|pid:none) Deinococcus deserti VCD115, comp... 139 4e-31
AM260479_1044(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 139 4e-31
CP001503_2454(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 139 4e-31
AM420293_6706(AM420293|pid:none) Saccharopolyspora erythraea NRR... 138 5e-31
AP009385_2179(AP009385|pid:none) Burkholderia multivorans ATCC 1... 138 5e-31
CU695239_278(CU695239|pid:none) Ralstonia solanacearum strain Mo... 138 7e-31
CP000614_2300(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 138 7e-31
CP001025_2137(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 138 7e-31
CP000378_1621(CP000378|pid:none) Burkholderia cenocepacia AU 105... 138 7e-31
CP000151_2383(CP000151|pid:none) Burkholderia sp. 383 chromosome... 138 7e-31
CP000010_1568(CP000010|pid:none) Burkholderia mallei ATCC 23344 ... 138 7e-31
CP000249_532(CP000249|pid:none) Frankia sp. CcI3, complete genome. 137 9e-31
CP000352_932(CP000352|pid:none) Ralstonia metallidurans CH34, co... 137 2e-30
CP000440_2274(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 137 2e-30
CP000109_823(CP000109|pid:none) Thiomicrospira crunogena XCL-2, ... 136 3e-30
AE000513_1473(AE000513|pid:none) Deinococcus radiodurans R1 chro... 135 3e-30
CP000875_3070(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 135 3e-30
CP001131_4291(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 135 3e-30
CP000251_4185(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 135 3e-30
CT573213_1005(CT573213|pid:none) Frankia alni str. ACN14A chromo... 135 6e-30
CP000348_2297(CP000348|pid:none) Leptospira borgpetersenii serov... 135 6e-30
CP000771_968(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 134 1e-29
AM746676_4230(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 133 2e-29
AE010300_890(AE010300|pid:none) Leptospira interrogans serovar l... 132 4e-29
CP000127_1071(CP000127|pid:none) Nitrosococcus oceani ATCC 19707... 132 4e-29
CP000359_909(CP000359|pid:none) Deinococcus geothermalis DSM 113... 131 8e-29
CP000769_4306(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 131 8e-29
CP000252_143(CP000252|pid:none) Syntrophus aciditrophicus SB, co... 130 1e-28
CP000159_385(CP000159|pid:none) Salinibacter ruber DSM 13855, co... 130 1e-28
AP008957_2722(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 130 2e-28
CU458896_2117(CU458896|pid:none) Mycobacterium abscessus chromos... 129 2e-28
CP001185_1522(CP001185|pid:none) Thermosipho africanus TCF52B, c... 129 2e-28
AM398681_2164(AM398681|pid:none) Flavobacterium psychrophilum JI... 129 3e-28
CP001389_2163(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 129 3e-28
AP011115_5976(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 129 4e-28
CP000716_1140(CP000716|pid:none) Thermosipho melanesiensis BI429... 129 4e-28
AP006618_2675(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 128 7e-28
CP000685_1235(CP000685|pid:none) Flavobacterium johnsoniae UW101... 128 7e-28
AE017283_1885(AE017283|pid:none) Propionibacterium acnes KPA1712... 127 9e-28
AJ245399_13(AJ245399|pid:none) Sinorhizobium meliloti ORF-378 (p... 127 1e-27
AY608634_1(AY608634|pid:none) Nyctotherus ovalis from Blaberus s... 84 1e-27
CP001074_3594(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 127 2e-27
(P56913) RecName: Full=NADH-quinone oxidoreductase subunit F 2; ... 127 2e-27
CP000431_5855(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 126 2e-27
CP000133_3692(CP000133|pid:none) Rhizobium etli CFN 42, complete... 126 2e-27
CP000325_2032(CP000325|pid:none) Mycobacterium ulcerans Agy99, c... 126 3e-27
(Q9XAQ9) RecName: Full=NADH-quinone oxidoreductase subunit F; ... 126 3e-27
CP001337_1005(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 125 4e-27
CP000909_2842(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 125 6e-27
CP001071_1585(CP001071|pid:none) Akkermansia muciniphila ATCC BA... 124 8e-27
BX908798_564(BX908798|pid:none) Parachlamydia-related symbiont U... 124 1e-26
CP001251_1617(CP001251|pid:none) Dictyoglomus turgidum DSM 6724,... 123 2e-26
CU466930_1125(CU466930|pid:none) Candidatus Cloacamonas acidamin... 123 2e-26
CP001146_1506(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 123 2e-26
AP009493_2979(AP009493|pid:none) Streptomyces griseus subsp. gri... 123 2e-26
BA000030_4849(BA000030|pid:none) Streptomyces avermitilis MA-468... 123 2e-26
CP000480_1996(CP000480|pid:none) Mycobacterium smegmatis str. MC... 122 3e-26
DQ438988_4(DQ438988|pid:none) Theonella swinhoei bacterial symbi... 122 3e-26
AP009153_2398(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 122 5e-26
CT573326_3235(CT573326|pid:none) Pseudomonas entomophila str. L4... 121 7e-26
CP001616_2608(CP001616|pid:none) Tolumonas auensis DSM 9187, com... 121 7e-26
AE016958_3206(AE016958|pid:none) Mycobacterium avium subsp. para... 121 7e-26
CP000479_3887(CP000479|pid:none) Mycobacterium avium 104, comple... 121 7e-26
CP000656_4459(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 121 7e-26
AE014075_2754(AE014075|pid:none) Escherichia coli CFT073, comple... 121 9e-26
FP236842_1264(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/9... 121 9e-26
CP000926_3670(CP000926|pid:none) Pseudomonas putida GB-1, comple... 121 9e-26
AP009153_1657(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 121 9e-26
CP000384_1564(CP000384|pid:none) Mycobacterium sp. MCS, complete... 120 1e-25
AE015451_4072(AE015451|pid:none) Pseudomonas putida KT2440 compl... 120 1e-25
CP001618_3202(CP001618|pid:none) Beutenbergia cavernae DSM 12333... 120 1e-25
CP001098_179(CP001098|pid:none) Halothermothrix orenii H 168, co... 120 2e-25
(P31979) RecName: Full=NADH-quinone oxidoreductase subunit F; ... 120 2e-25
CP000266_2173(CP000266|pid:none) Shigella flexneri 5 str. 8401, ... 120 2e-25
AP006725_3547(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 120 2e-25
CP000653_2803(CP000653|pid:none) Enterobacter sp. 638, complete ... 120 2e-25
CP000142_223(CP000142|pid:none) Pelobacter carbinolicus DSM 2380... 120 2e-25
CP000822_489(CP000822|pid:none) Citrobacter koseri ATCC BAA-895,... 120 2e-25
CP000812_1501(CP000812|pid:none) Thermotoga lettingae TMO, compl... 120 2e-25
CP000103_1011(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 120 2e-25
X68301_6(X68301|pid:none) E.coli DNA sequence of nuo operon. 120 2e-25
A85869(A85869) NADH dehydrogenase I chain F [imported] - Escheri... 120 2e-25
(P33901) RecName: Full=NADH-quinone oxidoreductase subunit F; ... 120 2e-25
L22504_3(L22504|pid:none) Salmonella typhimurium NADH dehydrogen... 120 2e-25
CP001145_178(CP001145|pid:none) Coprothermobacter proteolyticus ... 119 3e-25
CP000580_1530(CP000580|pid:none) Mycobacterium sp. JLS, complete... 119 3e-25
CP000702_1353(CP000702|pid:none) Thermotoga petrophila RKU-1, co... 119 4e-25
CP000083_2003(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 118 6e-25
CP000969_1300(CP000969|pid:none) Thermotoga sp. RQ2, complete ge... 118 6e-25
AE016853_3293(AE016853|pid:none) Pseudomonas syringae pv. tomato... 118 7e-25
CP001101_447(CP001101|pid:none) Chlorobium phaeobacteroides BS1,... 118 7e-25
CP000961_2838(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 118 7e-25
AY827554_2(AY827554|pid:none) Clostridium saccharoperbutylaceton... 118 7e-25
CP001080_29(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1,... 117 1e-24
CP000075_3200(CP000075|pid:none) Pseudomonas syringae pv. syring... 117 1e-24
CP000058_2971(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 117 1e-24
(Q9I0J7) RecName: Full=NADH-quinone oxidoreductase subunit F; ... 117 1e-24
CP000361_301(CP000361|pid:none) Arcobacter butzleri RM4018, comp... 117 2e-24
CP000916_1068(CP000916|pid:none) Thermotoga neapolitana DSM 4359... 117 2e-24
CP000076_3850(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 116 2e-24
CP000568_425(CP000568|pid:none) Clostridium thermocellum ATCC 27... 116 2e-24
AE000512_1401(AE000512|pid:none) Thermotoga maritima MSB8, compl... 116 2e-24
AM181176_3737(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 116 3e-24
CP000094_3603(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 116 3e-24
CP001032_1537(CP001032|pid:none) Opitutus terrae PB90-1, complet... 116 3e-24
CP001016_974(CP001016|pid:none) Beijerinckia indica subsp. indic... 116 3e-24
AY458641_78(AY458641|pid:none) Uncultured marine bacterium 463 c... 115 4e-24
AE017180_2706(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 115 4e-24
AE008691_832(AE008691|pid:none) Thermoanaerobacter tengcongensis... 115 4e-24
CP000975_1224(CP000975|pid:none) Methylacidiphilum infernorum V4... 115 5e-24
CP000148_1100(CP000148|pid:none) Geobacter metallireducens GS-15... 115 6e-24
BX936398_2581(BX936398|pid:none) Yersinia pseudotuberculosis IP3... 115 6e-24
AM942759_1741(AM942759|pid:none) Proteus mirabilis strain HI4320... 115 6e-24
CP001098_295(CP001098|pid:none) Halothermothrix orenii H 168, co... 115 6e-24
CP001098_626(CP001098|pid:none) Halothermothrix orenii H 168, co... 114 8e-24
AE009952_1607(AE009952|pid:none) Yersinia pestis KIM, complete g... 114 8e-24
CP000826_3292(CP000826|pid:none) Serratia proteamaculans 568, co... 114 1e-23
CP001130_216(CP001130|pid:none) Hydrogenobaculum sp. Y04AAS1, co... 114 1e-23
CP001055_519(CP001055|pid:none) Elusimicrobium minutum Pei191, c... 114 1e-23
CP000721_4031(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 113 2e-23
CP000716_476(CP000716|pid:none) Thermosipho melanesiensis BI429,... 113 2e-23
CP001089_3100(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 112 3e-23
CP000853_2214(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,... 112 3e-23
CP000923_2087(CP000923|pid:none) Thermoanaerobacter sp. X514, co... 112 3e-23
CR543861_654(CR543861|pid:none) Acinetobacter sp. ADP1 complete ... 112 4e-23
CP000916_688(CP000916|pid:none) Thermotoga neapolitana DSM 4359,... 112 4e-23
(Q89AU2) RecName: Full=NADH-quinone oxidoreductase subunit F; ... 112 4e-23
CP001034_1232(CP001034|pid:none) Natranaerobius thermophilus JW/... 112 4e-23
CP000142_2883(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 112 4e-23
CP000812_1503(CP000812|pid:none) Thermotoga lettingae TMO, compl... 112 4e-23
AE017180_342(AE017180|pid:none) Geobacter sulfurreducens PCA, co... 112 5e-23
CP001393_1232(CP001393|pid:none) Anaerocellum thermophilum DSM 6... 112 5e-23
EU024408_6(EU024408|pid:none) Thermococcus litoralis soluble [Ni... 112 5e-23
DQ831230_2(DQ831230|pid:none) Heliobacillus mobilis NAD(P)H-quin... 112 5e-23
AE017282_1310(AE017282|pid:none) Methylococcus capsulatus str. B... 112 5e-23
CP000863_713(CP000863|pid:none) Acinetobacter baumannii ACICU, c... 112 5e-23
CP000284_718(CP000284|pid:none) Methylobacillus flagellatus KT, ... 111 7e-23
CP000679_1783(CP000679|pid:none) Caldicellulosiruptor saccharoly... 111 7e-23
CP000142_1012(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 111 9e-23
CP000716_1142(CP000716|pid:none) Thermosipho melanesiensis BI429... 111 9e-23
CP000680_2397(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 111 9e-23
CP000698_327(CP000698|pid:none) Geobacter uraniireducens Rf4, co... 111 9e-23
CP000478_1936(CP000478|pid:none) Syntrophobacter fumaroxidans MP... 111 9e-23
CP001357_2453(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 110 1e-22
CP001287_97(CP001287|pid:none) Cyanothece sp. PCC 8801, complete... 110 2e-22
CP000771_970(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 110 2e-22
CT573071_424(CT573071|pid:none) Kuenenia stuttgartiensis genome ... 110 2e-22
CP001161_144(CP001161|pid:none) Buchnera aphidicola str. 5A (Acy... 110 2e-22
CP001158_144(CP001158|pid:none) Buchnera aphidicola str. Tuc7 (A... 110 2e-22
CP000027_141(CP000027|pid:none) Dehalococcoides ethenogenes 195,... 110 2e-22
CP001322_2542(CP001322|pid:none) Desulfatibacillum alkenivorans ... 110 2e-22
CP001034_99(CP001034|pid:none) Natranaerobius thermophilus JW/NM... 110 2e-22
AJ312124_7(AJ312124|pid:none) Eubacterium acidaminophilum ORF1 (... 110 2e-22
CP001056_2232(CP001056|pid:none) Clostridium botulinum B str. Ek... 110 2e-22
DQ531485_2(DQ531485|pid:none) Xanthobacter flavus WM2814 fds/htx... 110 2e-22
AJ965256_142(AJ965256|pid:none) Dehalococcoides sp. CBDB1 comple... 110 2e-22
DQ309870_2(DQ309870|pid:none) Arthrospira platensis FACHB341 dia... 109 3e-22
CP001087_1645(CP001087|pid:none) Desulfobacterium autotrophicum ... 109 3e-22
AE016830_1295(AE016830|pid:none) Enterococcus faecalis V583, com... 109 3e-22
CP000148_154(CP000148|pid:none) Geobacter metallireducens GS-15,... 109 3e-22
AM162647_1(AM162647|pid:none) Heliobacillus mobilis hoxEF gene f... 109 3e-22
CP000448_746(CP000448|pid:none) Syntrophomonas wolfei subsp. wol... 109 3e-22
AP009389_2011(AP009389|pid:none) Pelotomaculum thermopropionicum... 109 3e-22
CP001078_1967(CP001078|pid:none) Clostridium botulinum E3 str. A... 109 3e-22
AE000512_10(AE000512|pid:none) Thermotoga maritima MSB8, complet... 109 3e-22
CP001251_508(CP001251|pid:none) Dictyoglomus turgidum DSM 6724, ... 109 3e-22
AP006878_1614(AP006878|pid:none) Thermococcus kodakarensis KOD1 ... 109 3e-22
CP000083_3899(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 109 3e-22
CP001185_1524(CP001185|pid:none) Thermosipho africanus TCF52B, c... 108 4e-22
BA000012_4173(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 108 4e-22
CP000806_2316(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 108 4e-22
CP000771_220(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 108 6e-22
CR522870_683(CR522870|pid:none) Desulfotalea psychrophila LSv54 ... 108 8e-22
CP000860_1278(CP000860|pid:none) Candidatus Desulforudis audaxvi... 108 8e-22
CP000812_946(CP000812|pid:none) Thermotoga lettingae TMO, comple... 108 8e-22
AP009385_859(AP009385|pid:none) Burkholderia multivorans ATCC 17... 108 8e-22
CP001336_1383(CP001336|pid:none) Desulfitobacterium hafniense DC... 107 1e-21
CP000494_2903(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 107 1e-21
CP000885_87(CP000885|pid:none) Clostridium phytofermentans ISDg,... 107 1e-21
CP000478_838(CP000478|pid:none) Syntrophobacter fumaroxidans MPO... 107 1e-21
CP000614_936(CP000614|pid:none) Burkholderia vietnamiensis G4 ch... 107 1e-21
CP000612_1631(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 107 1e-21
CP000568_337(CP000568|pid:none) Clostridium thermocellum ATCC 27... 107 1e-21
AE007870_1664(AE007870|pid:none) Agrobacterium tumefaciens str. ... 107 1e-21
CP000853_906(CP000853|pid:none) Alkaliphilus oremlandii OhILAs, ... 107 1e-21
CP000724_3946(CP000724|pid:none) Alkaliphilus metalliredigens QY... 107 1e-21
CP001025_896(CP001025|pid:none) Burkholderia ambifaria MC40-6 ch... 107 2e-21
BA000030_1841(BA000030|pid:none) Streptomyces avermitilis MA-468... 107 2e-21
CP000930_1689(CP000930|pid:none) Heliobacterium modesticaldum Ic... 107 2e-21
AF1900(AF1900) hydrogenase chain [imported] - Nostoc sp. (strain... 107 2e-21
CP000697_1099(CP000697|pid:none) Acidiphilium cryptum JF-5, comp... 107 2e-21
AP009552_109(AP009552|pid:none) Microcystis aeruginosa NIES-843 ... 106 2e-21
AM778929_53(AM778929|pid:none) Microcystis aeruginosa PCC 7806 g... 106 2e-21
CP000142_920(CP000142|pid:none) Pelobacter carbinolicus DSM 2380... 106 2e-21
AM412317_1834(AM412317|pid:none) Clostridium botulinum A str. AT... 106 2e-21
CP000633_3004(CP000633|pid:none) Agrobacterium vitis S4 chromoso... 106 2e-21
BA000040_3137(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 106 3e-21
CP000269_3653(CP000269|pid:none) Janthinobacterium sp. Marseille... 106 3e-21
CP000252_88(CP000252|pid:none) Syntrophus aciditrophicus SB, com... 106 3e-21
CP000879_699(CP000879|pid:none) Petrotoga mobilis SJ95, complete... 105 4e-21
CP000478_2678(CP000478|pid:none) Syntrophobacter fumaroxidans MP... 105 4e-21
CP001275_764(CP001275|pid:none) Thermomicrobium roseum DSM 5159,... 105 4e-21
CR522870_2209(CR522870|pid:none) Desulfotalea psychrophila LSv54... 105 4e-21
AP008971_1155(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA... 105 4e-21
CP001096_799(CP001096|pid:none) Rhodopseudomonas palustris TIE-1... 105 5e-21
BA000022_1519(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 105 5e-21
CP000841_175(CP000841|pid:none) Acaryochloris marina MBIC11017 p... 105 5e-21
AY204356_2(AY204356|pid:none) Leptospirillum ferrooxidans probab... 105 5e-21
BX640441_23(BX640441|pid:none) Bordetella bronchiseptica strain ... 105 5e-21
CP000016_474(CP000016|pid:none) Candidatus Blochmannia pennsylva... 105 5e-21
CP000394_1933(CP000394|pid:none) Granulibacter bethesdensis CGDN... 105 5e-21
BX572595_102(BX572595|pid:none) Rhodopseudomonas palustris CGA00... 105 5e-21
CP000853_966(CP000853|pid:none) Alkaliphilus oremlandii OhILAs, ... 105 5e-21
CP000885_3760(CP000885|pid:none) Clostridium phytofermentans ISD... 105 5e-21
CP000939_1770(CP000939|pid:none) Clostridium botulinum B1 str. O... 105 5e-21
CP000148_3312(CP000148|pid:none) Geobacter metallireducens GS-15... 105 6e-21
AM180355_3495(AM180355|pid:none) Clostridium difficile 630 compl... 105 6e-21
CP001390_458(CP001390|pid:none) Geobacter sp. FRC-32, complete g... 105 6e-21
CP000027_712(CP000027|pid:none) Dehalococcoides ethenogenes 195,... 105 6e-21
CP000688_654(CP000688|pid:none) Dehalococcoides sp. BAV1, comple... 105 6e-21
AJ965256_569(AJ965256|pid:none) Dehalococcoides sp. CBDB1 comple... 105 6e-21
CP000323_576(CP000323|pid:none) Psychrobacter cryohalolentis K5,... 104 8e-21
CP001581_1870(CP001581|pid:none) Clostridium botulinum A2 str. K... 104 8e-21
AP006840_3205(AP006840|pid:none) Symbiobacterium thermophilum IA... 104 8e-21
AM902716_3696(AM902716|pid:none) Bordetella petrii strain DSM 12... 104 8e-21
CT573072_290(CT573072|pid:none) Kuenenia stuttgartiensis genome ... 104 8e-21
CT573071_267(CT573071|pid:none) Kuenenia stuttgartiensis genome ... 104 8e-21
CP000680_386(CP000680|pid:none) Pseudomonas mendocina ymp, compl... 104 1e-20
CP000252_3032(CP000252|pid:none) Syntrophus aciditrophicus SB, c... 104 1e-20
CP001344_3773(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 104 1e-20
CP000232_1846(CP000232|pid:none) Moorella thermoacetica ATCC 390... 104 1e-20
CP000698_4164(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 104 1e-20
FJ529691_45(FJ529691|pid:none) Uncultured bacterium URE4 genomic... 103 1e-20
CP001083_1932(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 103 1e-20
CP001298_4663(CP001298|pid:none) Methylobacterium chloromethanic... 103 1e-20
CP001150_2475(CP001150|pid:none) Rhodobacter sphaeroides KD131 c... 103 2e-20
CP001322_5050(CP001322|pid:none) Desulfatibacillum alkenivorans ... 103 2e-20
AL939128_81(AL939128|pid:none) Streptomyces coelicolor A3(2) com... 103 2e-20
CP000686_3457(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 103 2e-20
CP001052_2961(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 103 2e-20
CP000908_4344(CP000908|pid:none) Methylobacterium extorquens PA1... 103 2e-20
CP000232_1679(CP000232|pid:none) Moorella thermoacetica ATCC 390... 103 2e-20
CP000679_579(CP000679|pid:none) Caldicellulosiruptor saccharolyt... 103 2e-20
CP000143_2695(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 c... 103 2e-20
CP000612_1829(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 103 2e-20
CP000661_2828(CP000661|pid:none) Rhodobacter sphaeroides ATCC 17... 103 2e-20
CP000555_3700(CP000555|pid:none) Methylibium petroleiphilum PM1,... 102 3e-20
CP000482_1464(CP000482|pid:none) Pelobacter propionicus DSM 2379... 102 3e-20
CP001280_3555(CP001280|pid:none) Methylocella silvestris BL2, co... 102 4e-20
CP000301_4014(CP000301|pid:none) Rhodopseudomonas palustris BisB... 102 4e-20
CP001390_212(CP001390|pid:none) Geobacter sp. FRC-32, complete g... 102 4e-20
CP001029_4813(CP001029|pid:none) Methylobacterium populi BJ001, ... 102 5e-20
CP000270_3443(CP000270|pid:none) Burkholderia xenovorans LB400 c... 102 5e-20
CP000362_3941(CP000362|pid:none) Roseobacter denitrificans OCh 1... 101 9e-20
CP001349_248(CP001349|pid:none) Methylobacterium nodulans ORS 20... 100 1e-19
AM236080_4392(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 100 1e-19
CP000100_279(CP000100|pid:none) Synechococcus elongatus PCC 7942... 100 1e-19
CP001096_4667(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 100 1e-19
BX572606_249(BX572606|pid:none) Rhodopseudomonas palustris CGA00... 100 1e-19
CP001503_831(CP001503|pid:none) Burkholderia glumae BGR1 chromos... 100 1e-19
CP000884_1853(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 100 1e-19
CP001338_810(CP001338|pid:none) Candidatus Methanosphaerula palu... 100 2e-19
CP000376_160(CP000376|pid:none) Silicibacter sp. TM1040 mega pla... 100 2e-19
CP001001_4928(CP001001|pid:none) Methylobacterium radiotolerans ... 100 2e-19
AY714840_30(AY714840|pid:none) Uncultured archaeon GZfos26D6 clo... 100 2e-19
CU633749_590(CU633749|pid:none) Cupriavidus taiwanensis str. LMG... 100 2e-19
CP001150_1420(CP001150|pid:none) Rhodobacter sphaeroides KD131 c... 100 2e-19
CP001337_2398(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 100 3e-19
CP000661_1674(CP000661|pid:none) Rhodobacter sphaeroides ATCC 17... 100 3e-19
CP001191_3599(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 100 3e-19
CP000724_622(CP000724|pid:none) Alkaliphilus metalliredigens QYM... 99 4e-19
CP000142_1727(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 99 4e-19
CP000572_2923(CP000572|pid:none) Burkholderia pseudomallei 1106a... 99 5e-19
CP000570_2864(CP000570|pid:none) Burkholderia pseudomallei 668 c... 99 5e-19
AJ223295_2(AJ223295|pid:none) Ralstonia eutropha fds operon. 99 6e-19
CU466930_1127(CU466930|pid:none) Candidatus Cloacamonas acidamin... 99 6e-19
CP001408_3053(CP001408|pid:none) Burkholderia pseudomallei MSHR3... 99 6e-19
CT573072_566(CT573072|pid:none) Kuenenia stuttgartiensis genome ... 99 6e-19
CP000086_1601(CP000086|pid:none) Burkholderia thailandensis E264... 99 6e-19
CP000542_2337(CP000542|pid:none) Verminephrobacter eiseniae EF01... 98 8e-19
CP001154_284(CP001154|pid:none) Laribacter hongkongensis HLHK9, ... 98 8e-19
AE015451_2163(AE015451|pid:none) Pseudomonas putida KT2440 compl... 98 1e-18
AB057405_1(AB057405|pid:none) Anabaena variabilis hoxF, ORF, hox... 98 1e-18
CP000830_1274(CP000830|pid:none) Dinoroseobacter shibae DFL 12, ... 97 1e-18
CP000712_3501(CP000712|pid:none) Pseudomonas putida F1, complete... 97 1e-18
AM420293_2376(AM420293|pid:none) Saccharopolyspora erythraea NRR... 97 2e-18
CP000264_2559(CP000264|pid:none) Jannaschia sp. CCS1, complete g... 97 2e-18
CP000688_773(CP000688|pid:none) Dehalococcoides sp. BAV1, comple... 96 3e-18
CP000248_731(CP000248|pid:none) Novosphingobium aromaticivorans ... 96 3e-18
CP001124_1435(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 96 3e-18
CP000316_2753(CP000316|pid:none) Polaromonas sp. JS666, complete... 96 3e-18
CP000612_3239(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 96 4e-18
CP001281_2654(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 96 4e-18
CP001390_228(CP001390|pid:none) Geobacter sp. FRC-32, complete g... 95 9e-18
CT573326_1671(CT573326|pid:none) Pseudomonas entomophila str. L4... 94 1e-17
CP000269_402(CP000269|pid:none) Janthinobacterium sp. Marseille,... 94 1e-17
CP000539_3329(CP000539|pid:none) Acidovorax sp. JS42, complete g... 94 1e-17
CP001013_1454(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 94 1e-17
CP000480_153(CP000480|pid:none) Mycobacterium smegmatis str. MC2... 94 2e-17
DQ780104_1(DQ780104|pid:none) Endoriftia persephone 'Hot96_1+Hot... 93 3e-17
CP001069_611(CP001069|pid:none) Ralstonia pickettii 12J chromoso... 93 3e-17
BA000040_2316(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 92 4e-17
CP000267_3217(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 92 4e-17
CU207211_337(CU207211|pid:none) Herminiimonas arsenicoxydans chr... 92 6e-17
CP000699_1465(CP000699|pid:none) Sphingomonas wittichii RW1, com... 91 1e-16
U70364_2(U70364|pid:none) Rhodococcus opacus plasmid pHG201 puta... 91 1e-16
CP001392_2743(CP001392|pid:none) Diaphorobacter sp. TPSY, comple... 91 1e-16
CP000091_1117(CP000091|pid:none) Ralstonia eutropha JMP134 chrom... 91 1e-16
CP001069_852(CP001069|pid:none) Ralstonia pickettii 12J chromoso... 90 2e-16
CP001196_2662(CP001196|pid:none) Oligotropha carboxidovorans OM5... 90 3e-16
AM260480_1680(AM260480|pid:none) Ralstonia eutropha H16 chromoso... 89 4e-16
CP000089_976(CP000089|pid:none) Dechloromonas aromatica RCB, com... 89 5e-16
CP001281_2183(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 89 6e-16
CP000390_2407(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 88 8e-16
CP001350_85(CP001350|pid:none) Methylobacterium nodulans ORS 206... 87 2e-15
CR555306_1544(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 87 2e-15
AE017282_2444(AE017282|pid:none) Methylococcus capsulatus str. B... 86 3e-15
AP006840_3100(AP006840|pid:none) Symbiobacterium thermophilum IA... 83 3e-14
AP007255_169(AP007255|pid:none) Magnetospirillum magneticum AMB-... 82 4e-14
CP000943_3084(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 81 1e-13

>U61989_1(U61989|pid:none) Dictyostelium discoideum ndufv1 (ndufv1)
mRNA, complete cds.
Length = 479

Score = 421 bits (1081), Expect = e-116
Identities = 204/206 (99%), Positives = 206/206 (100%)
Frame = +2

Query: 53 MMNLGNRVKSVIKLTSTTGLTGKDFQATKVATFSTAQVQQAQENVRSYGGLKDKDRIFTN 232
MMNLGNRVKSVIKLTSTTGLTGK+FQATKVATFSTAQVQQAQENVRSYGGLKDKDRIFTN
Sbjct: 1 MMNLGNRVKSVIKLTSTTGLTGKNFQATKVATFSTAQVQQAQENVRSYGGLKDKDRIFTN 60

Query: 233 LYGEHDVYLKGAIARGDWYKTKNIIDKGKDWILKEMMASGLRGRGGAGFPSGLKWSFMPK 412
LYGEHDVYLKGAIARGDWYKTKNIIDKGKDWILKEMMASGLRGRGGAGFPSGLKWSFMP+
Sbjct: 61 LYGEHDVYLKGAIARGDWYKTKNIIDKGKDWILKEMMASGLRGRGGAGFPSGLKWSFMPE 120

Query: 413 TTSKDRPQYLVINADEGEPGTCKDREIMRHDPHKLIEGCLLAGFAMRACAAYIYIRGEFH 592
TTSKDRPQYLVINADEGEPGTCKDREIMRHDPHKLIEGCLLAGFAMRACAAYIYIRGEFH
Sbjct: 121 TTSKDRPQYLVINADEGEPGTCKDREIMRHDPHKLIEGCLLAGFAMRACAAYIYIRGEFH 180

Query: 593 YEAKVLEQAIDEAYKAGLIGENACGT 670
YEAKVLEQAIDEAYKAGLIGENACGT
Sbjct: 181 YEAKVLEQAIDEAYKAGLIGENACGT 206

Score = 323 bits (829), Expect = 9e-87
Identities = 172/227 (75%), Positives = 175/227 (77%), Gaps = 18/227 (7%)
Frame = +1

Query: 904 IVLLGGAWFASFGRPKNAGTKLFCISRSCQ*SHVLLKKR*VFH*EN*LINIVVVSLEVGI 1083
I+ GGAWFASFGRPKNAGTKLFCIS HV N V E+ I
Sbjct: 271 ILRRGGAWFASFGRPKNAGTKLFCIS-----GHVN--------------NPCTVEEEMSI 311

Query: 1084 T*KVLFQ------------------GGSSVPVLPKNICDNVLMDFDDLRQHRSGLGTAAV 1209
+ L GGSSVPVLPKNICDNVLMDFDDLRQHRSGLGTAAV
Sbjct: 312 PLRELIDKHCGGVIGGWDNLKGVIPGGSSVPVLPKNICDNVLMDFDDLRQHRSGLGTAAV 371

Query: 1210 IVMNKETDMIAAIARLSKFYKHESCGQCTPCREGVGWLYDITDRLVTGNAKPDEIDSLEE 1389
IVMNKETDMIAAIARLSKFYKHESCGQCTPCREGVGWLYDITDRLVTGNAKPDEIDSLEE
Sbjct: 372 IVMNKETDMIAAIARLSKFYKHESCGQCTPCREGVGWLYDITDRLVTGNAKPDEIDSLEE 431

Query: 1390 ISRQIEGHTICALGDAAAWPVQGLIRHFRPEIEDRIKQFQLNKKQSP 1530
ISRQIEGHTICALGDAAAWPVQGLIRHFRPEIEDRIKQFQLNKKQSP
Sbjct: 432 ISRQIEGHTICALGDAAAWPVQGLIRHFRPEIEDRIKQFQLNKKQSP 478

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,614,821,711
Number of extensions: 51605239
Number of successful extensions: 118160
Number of sequences better than 10.0: 700
Number of HSP's gapped: 117331
Number of HSP's successfully gapped: 1606
Length of query: 559
Length of database: 1,040,966,779
Length adjustment: 134
Effective length of query: 425
Effective length of database: 611,592,589
Effective search space: 259926850325
Effective search space used: 259926850325
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.69 gvh: 0.53 alm: 0.35 top: 0.53 tms: 0.00 mit: 0.40 mip: 0.05
nuc: 0.04 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

40.0 %: mitochondrial
32.0 %: nuclear
16.0 %: cytoplasmic
4.0 %: cytoskeletal
4.0 %: vacuolar
4.0 %: plasma membrane

>> prediction for Contig-U09595-1 is mit

VS (DIR, S) 4
VH (FL, L) 0
VF (FL, S) 8
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0