Contig-U09569-1
Contig ID Contig-U09569-1
Contig update 2002. 9.13
Contig sequence
>Contig-U09569-1 (Contig-U09569-1Q) /CSM_Contig/Contig-U09569-1Q.Seq.d
CACTGTTGGCCTACTGGNAAAAAAAAAAGATTCCAAAATAATAAAATGAA
CAAATTAATTAAAATCATTGTAATTTTTACAATTATTGTAAATGTAATTA
ATGGTTTAGCATATCCAAAATATAATGCAGAAGAATTAATATTGGATGGT
AGTGGTAGTTTCCCAGCACAATGGTTCACTCAAACATTAGATCATTTTAA
TTTTCAAAATAATCAAACATTTCAACAAAAATATTATGTAAATGATCAAT
ATTATAACTATAAAAATGGTGGACCAATCATTTTATACATTAATGGTGAA
GGTCCAGTTAGTTCACCACCATATTCTTCTGATGATGGTGTTGTAATTTA
TGCTCAAGCATTAAATTGTATGATTGTTACATTAGAACATAGATTTTATG
GTGAATCATCACCATTTTCAGAATTAACAATTGAAAATTTACAATATCTT
AGTCATCAACAAGCATTGGAAGATTTAGCAACATTTGTTGTTGATTTTCA
AAGTAAACTTGTTGGTGCAGGTCATATTGTTACAATTGGTGGATCATATA
GTGGAGCATTATCAGCATGGTTCCGTATAAAGTATCCACATATTACTGTT
GGTTCAATTGCATCATTAGGTGTTGTACATTCAATTTTAGATTTCACTGC
ATTCGATGCCTATGTATCATATGCTG----------AAACAAATACTTCA
AGCTGAATCATTGGTTGATATTGGTGATTTCTTTTATTGGTTAGCCGATT
CGATGATGGAGGGTGACCAATACGGCTACATAGATGAATTATGTAGTCCA
TTGGTTGACGCTATCAATAGCGGTACCAGTGGTATCGATTTGATTACAGT
CTACTCCAATTACACTATCAACACTTGGGGTAAAGTTTTAGGTACTCCAG
ATGAATATTCAACAGCTTGGCAACAAAATGTCACCTATGACCCATCAAAG
AGTGCCGATAGAGCTTGGTGGTATCAAACTTGTAGTTCATTAGGTTGGAT
GCAAGCTGCACCATCTGAAAATTCAATTAGATCTTCATTGGTAAATATGA
CCTATTTCCAAACTCATTGTCAACAATTATTCGGTCAAGCCATTTGGCCT
CCAAATGTAAATGCTGTAAATACTCAATACGGTGGTGATCAATCAAATCC
ATTATTGAATGCAGCTGGTACTAATATTTTATTCACCAATGGTCATGCTG
ATCCATGGAGTCAAGCTTCAATCGTAAATTCAAATTATCCAAATGTTGAA
CCCTCTGCAATGACCACTTGTCGTAAATGTGGTCATTGTGTAGATTTAAG
AGGTTGTCCAGGTGGTTGTGATTTACCAAATAATTTAGATCAAGTTAGAT
CACTTTCATTAAAATCAATTGCACAATGGTTAAATTTAAATAATTAAAAA
TAAAATAAATATAAAATAAAATAAAAATTAACAA

Gap gap included
Contig length 1424
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 3658944
End point 3660352
Strand (PLUS/MINUS) PLUS
Number of clones 8
Number of EST 14
Link to clone list U09569
List of clone(s)

est1=VFC812F,1,508
est2=VFH712F,5,299
est3=VFC535F,7,621
est4=VFM655F,7,163
est5=VFL309F,19,676
est6=VFH136F,28,513
est7=VFI493F,34,627
est8=VFC812Z,677,1425
est9=VFI493Z,680,1411
est10=VFH712Z,683,1395
est11=VFL309Z,735,1425
est12=VFM655Z,746,1406
est13=VFL151Z,757,1412
est14=VFC535Z,795,1417
Translated Amino Acid sequence
HCWPTGKKKRFQNNKMNKLIKIIVIFTIIVNVINGLAYPKYNAEELILDGSGSFPAQWFT
QTLDHFNFQNNQTFQQKYYVNDQYYNYKNGGPIILYINGEGPVSSPPYSSDDGVVIYAQA
LNCMIVTLEHRFYGESSPFSELTIENLQYLSHQQALEDLATFVVDFQSKLVGAGHIVTIG
GSYSGALSAWFRIKYPHITVGSIASLGVVHSILDFTAFDAYVSYA---

---KQILQAESLVDIGDFFYWLADSMMEGDQYGYIDELCSPLVDAINSGTSGIDLITVYS
NYTINTWGKVLGTPDEYSTAWQQNVTYDPSKSADRAWWYQTCSSLGWMQAAPSENSIRSS
LVNMTYFQTHCQQLFGQAIWPPNVNAVNTQYGGDQSNPLLNAAGTNILFTNGHADPWSQA
SIVNSNYPNVEPSAMTTCRKCGHCVDLRGCPGGCDLPNNLDQVRSLSLKSIAQWLNLNN*
k*nkykik*klt


Translated Amino Acid sequence (All Frames)
Frame A:
HCWPTGKKKRFQNNKMNKLIKIIVIFTIIVNVINGLAYPKYNAEELILDGSGSFPAQWFT
QTLDHFNFQNNQTFQQKYYVNDQYYNYKNGGPIILYINGEGPVSSPPYSSDDGVVIYAQA
LNCMIVTLEHRFYGESSPFSELTIENLQYLSHQQALEDLATFVVDFQSKLVGAGHIVTIG
GSYSGALSAWFRIKYPHITVGSIASLGVVHSILDFTAFDAYVSYA---

---KQILQAESLVDIGDFFYWLADSMMEGDQYGYIDELCSPLVDAINSGTSGIDLITVYS
NYTINTWGKVLGTPDEYSTAWQQNVTYDPSKSADRAWWYQTCSSLGWMQAAPSENSIRSS
LVNMTYFQTHCQQLFGQAIWPPNVNAVNTQYGGDQSNPLLNAAGTNILFTNGHADPWSQA
SIVNSNYPNVEPSAMTTCRKCGHCVDLRGCPGGCDLPNNLDQVRSLSLKSIAQWLNLNN*
k*nkykik*klt

Frame B:
tvgllxkkkdskiik*tn*lksl*flqll*m*lmv*hiqnimqkn*ywmvvvvsqhngsl
kh*iilifkiikhfnknim*miniitikmvdqsfytlmvkvqlvhhhillmmvl*fmlkh
*iv*llh*nidfmvnhhhfqn*qlkiynilvinkhwki*qhlllifkvnllvqvillqlv
dhivehyqhgsv*sihilllvqlhh*vlyiqf*islhsmpmyhml---

---nkyfklnhwlilvisfig*pir*wrvtntat*mnyvvhwltlsiavpvvsi*lqstp
itlstlgvkf*vlqmniqqlgnkmspmthqrvpielggiklvvh*vgcklhhlkiqldlh
w*i*pisklivnnysvkpfglqm*ml*ilntvvinqihy*mqlvlifyspmvmlihgvkl
qs*iqiiqmlnplq*plvvnvviv*i*evvqvvviyqii*ikldhfh*nqlhng*i*iik
nkinik*nkn*q

Frame C:
llaywxkkkipk**neqin*nhcnfynyckcn*wfsiski*crrinigw*w*fpstmvhs
nirsf*fsk*snistkilck*sil*l*kwwtnhfih*w*rss*fttiff**wccnlcssi
klydcyirt*ilw*iitifrinn*kftis*sstsigrfsnicc*fsk*tcwcrsycynww
ii*wsiismvpykvstyycwfnciircctfnfrfhcirclciic---

---tntss*iig*yw*flllvsrfddgg*pirlhr*im*sig*ryq*ryqwyrfdysllq
lhyqhlg*sfrysr*ifnslatkchl*pikecr*slvvsnl*firldascti*kfn*ifi
gkydlfpnslstiirsshlaskckcckysirw*siksiiecswy*yfihqwsc*smessf
nrkfklskc*tlcndhls*mwslcrfkrlsrwl*ftk*frss*itfikinctmvkfk*lk
ik*i*nkikin

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U09569-1 (Contig-U09569-1Q)
/CSM_Contig/Contig-U09569-1Q.Seq.d
(1434 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U09569-1 (Contig-U09569-1Q) /CSM_Contig/Conti... 2619 0.0
Contig-U10799-1 (Contig-U10799-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U06117-1 (Contig-U06117-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U13639-1 (Contig-U13639-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U12423-1 (Contig-U12423-1Q) /CSM_Contig/Conti... 38 0.026
Contig-U11153-1 (Contig-U11153-1Q) /CSM_Contig/Conti... 38 0.026
Contig-U11145-1 (Contig-U11145-1Q) /CSM_Contig/Conti... 38 0.026
Contig-U12940-1 (Contig-U12940-1Q) /CSM_Contig/Conti... 36 0.10
Contig-U06855-1 (Contig-U06855-1Q) /CSM_Contig/Conti... 36 0.10

>Contig-U09569-1 (Contig-U09569-1Q) /CSM_Contig/Contig-U09569-1Q.Seq.d
Length = 1434

Score = 2619 bits (1321), Expect = 0.0
Identities = 1351/1351 (100%)
Strand = Plus / Plus


Query: 29 gattccaaaataataaaatgaacaaattaattaaaatcattgtaatttttacaattattg 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29 gattccaaaataataaaatgaacaaattaattaaaatcattgtaatttttacaattattg 88


Query: 89 taaatgtaattaatggtttagcatatccaaaatataatgcagaagaattaatattggatg 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 taaatgtaattaatggtttagcatatccaaaatataatgcagaagaattaatattggatg 148


Query: 149 gtagtggtagtttcccagcacaatggttcactcaaacattagatcattttaattttcaaa 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 gtagtggtagtttcccagcacaatggttcactcaaacattagatcattttaattttcaaa 208


Query: 209 ataatcaaacatttcaacaaaaatattatgtaaatgatcaatattataactataaaaatg 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ataatcaaacatttcaacaaaaatattatgtaaatgatcaatattataactataaaaatg 268


Query: 269 gtggaccaatcattttatacattaatggtgaaggtccagttagttcaccaccatattctt 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gtggaccaatcattttatacattaatggtgaaggtccagttagttcaccaccatattctt 328


Query: 329 ctgatgatggtgttgtaatttatgctcaagcattaaattgtatgattgttacattagaac 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ctgatgatggtgttgtaatttatgctcaagcattaaattgtatgattgttacattagaac 388


Query: 389 atagattttatggtgaatcatcaccattttcagaattaacaattgaaaatttacaatatc 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 atagattttatggtgaatcatcaccattttcagaattaacaattgaaaatttacaatatc 448


Query: 449 ttagtcatcaacaagcattggaagatttagcaacatttgttgttgattttcaaagtaaac 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ttagtcatcaacaagcattggaagatttagcaacatttgttgttgattttcaaagtaaac 508


Query: 509 ttgttggtgcaggtcatattgttacaattggtggatcatatagtggagcattatcagcat 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ttgttggtgcaggtcatattgttacaattggtggatcatatagtggagcattatcagcat 568


Query: 569 ggttccgtataaagtatccacatattactgttggttcaattgcatcattaggtgttgtac 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ggttccgtataaagtatccacatattactgttggttcaattgcatcattaggtgttgtac 628


Query: 629 attcaattttagatttcactgcattcgatgcctatgtatcatatgctgnnnnnnnnnnaa 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 attcaattttagatttcactgcattcgatgcctatgtatcatatgctgnnnnnnnnnnaa 688


Query: 689 acaaatacttcaagctgaatcattggttgatattggtgatttcttttattggttagccga 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 acaaatacttcaagctgaatcattggttgatattggtgatttcttttattggttagccga 748


Query: 749 ttcgatgatggagggtgaccaatacggctacatagatgaattatgtagtccattggttga 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 ttcgatgatggagggtgaccaatacggctacatagatgaattatgtagtccattggttga 808


Query: 809 cgctatcaatagcggtaccagtggtatcgatttgattacagtctactccaattacactat 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 cgctatcaatagcggtaccagtggtatcgatttgattacagtctactccaattacactat 868


Query: 869 caacacttggggtaaagttttaggtactccagatgaatattcaacagcttggcaacaaaa 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 caacacttggggtaaagttttaggtactccagatgaatattcaacagcttggcaacaaaa 928


Query: 929 tgtcacctatgacccatcaaagagtgccgatagagcttggtggtatcaaacttgtagttc 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 tgtcacctatgacccatcaaagagtgccgatagagcttggtggtatcaaacttgtagttc 988


Query: 989 attaggttggatgcaagctgcaccatctgaaaattcaattagatcttcattggtaaatat 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 attaggttggatgcaagctgcaccatctgaaaattcaattagatcttcattggtaaatat 1048


Query: 1049 gacctatttccaaactcattgtcaacaattattcggtcaagccatttggcctccaaatgt 1108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1049 gacctatttccaaactcattgtcaacaattattcggtcaagccatttggcctccaaatgt 1108


Query: 1109 aaatgctgtaaatactcaatacggtggtgatcaatcaaatccattattgaatgcagctgg 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1109 aaatgctgtaaatactcaatacggtggtgatcaatcaaatccattattgaatgcagctgg 1168


Query: 1169 tactaatattttattcaccaatggtcatgctgatccatggagtcaagcttcaatcgtaaa 1228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1169 tactaatattttattcaccaatggtcatgctgatccatggagtcaagcttcaatcgtaaa 1228


Query: 1229 ttcaaattatccaaatgttgaaccctctgcaatgaccacttgtcgtaaatgtggtcattg 1288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1229 ttcaaattatccaaatgttgaaccctctgcaatgaccacttgtcgtaaatgtggtcattg 1288


Query: 1289 tgtagatttaagaggttgtccaggtggttgtgatttaccaaataatttagatcaagttag 1348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1289 tgtagatttaagaggttgtccaggtggttgtgatttaccaaataatttagatcaagttag 1348


Query: 1349 atcactttcattaaaatcaattgcacaatgg 1379
|||||||||||||||||||||||||||||||
Sbjct: 1349 atcactttcattaaaatcaattgcacaatgg 1379


>Contig-U10799-1 (Contig-U10799-1Q) /CSM_Contig/Contig-U10799-1Q.Seq.d
Length = 1079

Score = 42.1 bits (21), Expect = 0.002
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 884 agttttaggtactccagatga 904
|||||||||||||||||||||
Sbjct: 733 agttttaggtactccagatga 753


Score = 32.2 bits (16), Expect = 1.6
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 2 actgttggcctactgg 17
||||||||||||||||
Sbjct: 1 actgttggcctactgg 16


>Contig-U06117-1 (Contig-U06117-1Q) /CSM_Contig/Contig-U06117-1Q.Seq.d
Length = 966

Score = 42.1 bits (21), Expect = 0.002
Identities = 30/33 (90%)
Strand = Plus / Plus


Query: 33 ccaaaataataaaatgaacaaattaattaaaat 65
||||||||||||||| | |||| ||||||||||
Sbjct: 861 ccaaaataataaaattaccaaaataattaaaat 893


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 22,669
Number of Sequences: 6905
Number of extensions: 22669
Number of successful extensions: 2937
Number of sequences better than 10.0: 646
length of query: 1434
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1418
effective length of database: 5,564,391
effective search space: 7890306438
effective search space used: 7890306438
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.16
Homology vs DNA
Query= Contig-U09569-1 (Contig-U09569-1Q) /CSM_Contig/Contig-U09569-1Q.Seq.d
(1434 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ430101) Dictyostelium discoideum cDNA clone:ddv6h04, 3' e... 1330 0.0 1
(BJ434169) Dictyostelium discoideum cDNA clone:ddv16h03, 3' ... 1318 0.0 1
(BJ432165) Dictyostelium discoideum cDNA clone:ddv17j24, 3' ... 1316 0.0 1
(BJ433808) Dictyostelium discoideum cDNA clone:ddv23b03, 3' ... 1209 0.0 1
(BJ433981) Dictyostelium discoideum cDNA clone:ddv23e13, 3' ... 1172 0.0 1
(BJ415570) Dictyostelium discoideum cDNA clone:ddv23b03, 5' ... 1136 0.0 1
(BJ430163) Dictyostelium discoideum cDNA clone:ddv6e09, 3' e... 1096 0.0 1
(BJ435287) Dictyostelium discoideum cDNA clone:ddv26m14, 3' ... 1061 0.0 1
(BJ414048) Dictyostelium discoideum cDNA clone:ddv17j24, 5' ... 1033 0.0 1
(BJ411913) Dictyostelium discoideum cDNA clone:ddv6e09, 5' e... 1021 0.0 1
(BJ413380) Dictyostelium discoideum cDNA clone:ddv15g09, 5' ... 801 0.0 1
(BJ411857) Dictyostelium discoideum cDNA clone:ddv6h04, 5' e... 783 0.0 2
(BJ413524) Dictyostelium discoideum cDNA clone:ddv16h03, 5' ... 264 4e-92 3
(BJ416514) Dictyostelium discoideum cDNA clone:ddv26m14, 5' ... 121 8e-23 1
(BJ415810) Dictyostelium discoideum cDNA clone:ddv23g20, 5' ... 36 7e-07 4
(BJ413214) Dictyostelium discoideum cDNA clone:ddv14j17, 5' ... 36 9e-07 4
(BJ387798) Dictyostelium discoideum cDNA clone:dds5f06, 5' e... 36 1e-06 4
(BJ363423) Dictyostelium discoideum cDNA clone:ddc26f15, 5' ... 36 1e-06 4
(BJ415342) Dictyostelium discoideum cDNA clone:ddv22c07, 5' ... 36 1e-06 4
(BJ415522) Dictyostelium discoideum cDNA clone:ddv22i19, 5' ... 36 2e-06 4
(BJ411740) Dictyostelium discoideum cDNA clone:ddv5j18, 5' e... 36 2e-06 4
(BJ411669) Dictyostelium discoideum cDNA clone:ddv5h07, 5' e... 36 3e-06 4
(BJ391311) Dictyostelium discoideum cDNA clone:dds13k06, 5' ... 36 3e-06 4
(BJ413720) Dictyostelium discoideum cDNA clone:ddv16a24, 5' ... 36 3e-06 4
(BJ413779) Dictyostelium discoideum cDNA clone:ddv16n22, 5' ... 36 3e-06 4
(BJ387679) Dictyostelium discoideum cDNA clone:dds4m06, 5' e... 36 3e-06 4
(BJ388854) Dictyostelium discoideum cDNA clone:dds16c17, 5' ... 36 4e-06 4
(BJ413607) Dictyostelium discoideum cDNA clone:ddv16i12, 5' ... 36 4e-06 4
(BJ388987) Dictyostelium discoideum cDNA clone:dds17c05, 5' ... 36 4e-06 4
(BJ415517) Dictyostelium discoideum cDNA clone:ddv22h19, 5' ... 36 5e-06 4
(BJ389151) Dictyostelium discoideum cDNA clone:dds17n17, 5' ... 36 5e-06 4
(BJ416443) Dictyostelium discoideum cDNA clone:ddv26o08, 5' ... 36 6e-06 4
(BJ416042) Dictyostelium discoideum cDNA clone:ddv24o13, 5' ... 36 6e-06 4
(BJ415462) Dictyostelium discoideum cDNA clone:ddv22l16, 5' ... 36 6e-06 4
(BJ415569) Dictyostelium discoideum cDNA clone:ddv23b02, 5' ... 36 9e-06 4
(BJ411526) Dictyostelium discoideum cDNA clone:ddv4c24, 5' e... 36 1e-05 4
(BJ415584) Dictyostelium discoideum cDNA clone:ddv23d05, 5' ... 36 2e-05 4
(BJ413274) Dictyostelium discoideum cDNA clone:ddv14m19, 5' ... 54 2e-05 2
(BJ324450) Dictyostelium discoideum cDNA clone:dda6k08, 5' e... 54 2e-05 2
(BJ411658) Dictyostelium discoideum cDNA clone:ddv5d09, 5' e... 36 3e-05 4
(BJ387292) Dictyostelium discoideum cDNA clone:dds1k09, 5' e... 36 0.001 3
(BJ411600) Dictyostelium discoideum cDNA clone:ddv5f02, 5' e... 36 0.001 3
(BJ417234) Dictyostelium discoideum cDNA clone:ddv29n24, 5' ... 36 0.002 3
(BJ413567) Dictyostelium discoideum cDNA clone:ddv16a08, 5' ... 36 0.002 3
(BJ360925) Dictyostelium discoideum cDNA clone:ddc8h13, 5' e... 36 0.002 3
(BJ390362) Dictyostelium discoideum cDNA clone:dds22k04, 5' ... 36 0.002 3
(BJ412219) Dictyostelium discoideum cDNA clone:ddv7m08, 5' e... 36 0.002 3
(BJ362130) Dictyostelium discoideum cDNA clone:ddc20l10, 5' ... 36 0.002 3
(BJ413452) Dictyostelium discoideum cDNA clone:ddv15j17, 5' ... 36 0.002 3
(BJ412315) Dictyostelium discoideum cDNA clone:ddv7h24, 5' e... 36 0.002 3
(BJ390920) Dictyostelium discoideum cDNA clone:dds14b12, 5' ... 36 0.002 3
(BJ387557) Dictyostelium discoideum cDNA clone:dds3k10, 5' e... 36 0.002 3
(BJ390887) Dictyostelium discoideum cDNA clone:dds14i01, 5' ... 36 0.002 3
(BJ388007) Dictyostelium discoideum cDNA clone:dds7j09, 5' e... 36 0.002 3
(BJ413985) Dictyostelium discoideum cDNA clone:ddv17k15, 5' ... 36 0.002 3
(BJ361528) Dictyostelium discoideum cDNA clone:ddc17f15, 5' ... 36 0.002 3
(BJ410855) Dictyostelium discoideum cDNA clone:ddv2i06, 5' e... 36 0.002 3
(BJ389913) Dictyostelium discoideum cDNA clone:dds20e17, 5' ... 36 0.002 3
(BJ414653) Dictyostelium discoideum cDNA clone:ddv20b04, 5' ... 36 0.002 3
(BJ412296) Dictyostelium discoideum cDNA clone:ddv7b23, 5' e... 36 0.003 3
(BJ413437) Dictyostelium discoideum cDNA clone:ddv15g13, 5' ... 36 0.006 3
(BJ413401) Dictyostelium discoideum cDNA clone:ddv15m07, 5' ... 36 0.006 3
(BJ411367) Dictyostelium discoideum cDNA clone:ddv4j03, 5' e... 36 0.006 3
(BJ388052) Dictyostelium discoideum cDNA clone:dds7k13, 5' e... 36 0.006 3
(BJ360307) Dictyostelium discoideum cDNA clone:ddc5p08, 5' e... 36 0.006 3
(BJ413496) Dictyostelium discoideum cDNA clone:ddv16b01, 5' ... 36 0.007 3
(BJ413399) Dictyostelium discoideum cDNA clone:ddv15l07, 5' ... 36 0.007 3
(BJ388411) Dictyostelium discoideum cDNA clone:dds9n10, 5' e... 36 0.007 3
(BJ412805) Dictyostelium discoideum cDNA clone:ddv9n19, 5' e... 36 0.007 3
(BJ360543) Dictyostelium discoideum cDNA clone:ddc6k14, 5' e... 36 0.007 3
(BJ417108) Dictyostelium discoideum cDNA clone:ddv29o12, 5' ... 36 0.007 3
(BJ417098) Dictyostelium discoideum cDNA clone:ddv29m08, 5' ... 36 0.007 3
(BJ417756) Dictyostelium discoideum cDNA clone:ddv28n13, 5' ... 36 0.007 3
(BJ412786) Dictyostelium discoideum cDNA clone:ddv9i20, 5' e... 36 0.007 3
(BJ417484) Dictyostelium discoideum cDNA clone:ddv30c24, 5' ... 36 0.007 3
(BJ387256) Dictyostelium discoideum cDNA clone:dds1k02, 5' e... 36 0.007 3
(BJ410003) Dictyostelium discoideum cDNA clone:ddv10i22, 5' ... 36 0.007 3
(BJ363261) Dictyostelium discoideum cDNA clone:ddc25f24, 5' ... 36 0.007 3
(AU263564) Dictyostelium discoideum vegetative cDNA clone:VS... 36 0.007 3
(BJ360389) Dictyostelium discoideum cDNA clone:ddc5j22, 5' e... 36 0.007 3
(BJ362985) Dictyostelium discoideum cDNA clone:ddc24o08, 5' ... 36 0.007 3
(BJ412807) Dictyostelium discoideum cDNA clone:ddv9n21, 5' e... 36 0.007 3
(BJ363430) Dictyostelium discoideum cDNA clone:ddc26i17, 5' ... 36 0.007 3
(BJ389876) Dictyostelium discoideum cDNA clone:dds20l12, 5' ... 36 0.007 3
(BJ390656) Dictyostelium discoideum cDNA clone:dds23b10, 5' ... 36 0.007 3
(BJ412637) Dictyostelium discoideum cDNA clone:ddv9f12, 5' e... 36 0.008 3
(BJ411102) Dictyostelium discoideum cDNA clone:ddv3b05, 5' e... 36 0.008 3
(BJ411362) Dictyostelium discoideum cDNA clone:ddv4h05, 5' e... 36 0.008 3
(BJ411241) Dictyostelium discoideum cDNA clone:ddv3f18, 5' e... 36 0.008 3
(BJ410515) Dictyostelium discoideum cDNA clone:ddv12h20, 5' ... 36 0.008 3
(BJ412064) Dictyostelium discoideum cDNA clone:ddv6h19, 5' e... 36 0.008 3
(AU266957) Dictyostelium discoideum vegetative cDNA clone:VS... 36 0.008 3
(AU270524) Dictyostelium discoideum vegetative cDNA clone:VS... 36 0.008 3
(BJ417333) Dictyostelium discoideum cDNA clone:ddv30b12, 5' ... 36 0.008 3
(BJ413140) Dictyostelium discoideum cDNA clone:ddv14g10, 5' ... 36 0.008 3
(BJ391127) Dictyostelium discoideum cDNA clone:dds15o02, 5' ... 36 0.008 3
(BJ387017) Dictyostelium discoideum cDNA clone:dds11m19, 5' ... 36 0.008 3
(BJ417405) Dictyostelium discoideum cDNA clone:ddv30b18, 5' ... 36 0.008 3
(BJ410067) Dictyostelium discoideum cDNA clone:ddv11h03, 5' ... 36 0.008 3
(BJ416929) Dictyostelium discoideum cDNA clone:ddv27f20, 5' ... 36 0.008 3

>(BJ430101) Dictyostelium discoideum cDNA clone:ddv6h04, 3' end,
single read.
Length = 749

Score = 1330 bits (671), Expect = 0.0
Identities = 671/671 (100%)
Strand = Plus / Minus


Query: 687 aaacaaatacttcaagctgaatcattggttgatattggtgatttcttttattggttagcc 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 aaacaaatacttcaagctgaatcattggttgatattggtgatttcttttattggttagcc 690


Query: 747 gattcgatgatggagggtgaccaatacggctacatagatgaattatgtagtccattggtt 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gattcgatgatggagggtgaccaatacggctacatagatgaattatgtagtccattggtt 630


Query: 807 gacgctatcaatagcggtaccagtggtatcgatttgattacagtctactccaattacact 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gacgctatcaatagcggtaccagtggtatcgatttgattacagtctactccaattacact 570


Query: 867 atcaacacttggggtaaagttttaggtactccagatgaatattcaacagcttggcaacaa 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 atcaacacttggggtaaagttttaggtactccagatgaatattcaacagcttggcaacaa 510


Query: 927 aatgtcacctatgacccatcaaagagtgccgatagagcttggtggtatcaaacttgtagt 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aatgtcacctatgacccatcaaagagtgccgatagagcttggtggtatcaaacttgtagt 450


Query: 987 tcattaggttggatgcaagctgcaccatctgaaaattcaattagatcttcattggtaaat 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tcattaggttggatgcaagctgcaccatctgaaaattcaattagatcttcattggtaaat 390


Query: 1047 atgacctatttccaaactcattgtcaacaattattcggtcaagccatttggcctccaaat 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 atgacctatttccaaactcattgtcaacaattattcggtcaagccatttggcctccaaat 330


Query: 1107 gtaaatgctgtaaatactcaatacggtggtgatcaatcaaatccattattgaatgcagct 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gtaaatgctgtaaatactcaatacggtggtgatcaatcaaatccattattgaatgcagct 270


Query: 1167 ggtactaatattttattcaccaatggtcatgctgatccatggagtcaagcttcaatcgta 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ggtactaatattttattcaccaatggtcatgctgatccatggagtcaagcttcaatcgta 210


Query: 1227 aattcaaattatccaaatgttgaaccctctgcaatgaccacttgtcgtaaatgtggtcat 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 aattcaaattatccaaatgttgaaccctctgcaatgaccacttgtcgtaaatgtggtcat 150


Query: 1287 tgtgtagatttaagaggttgtccaggtggttgtgatttaccaaataatttagatcaagtt 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tgtgtagatttaagaggttgtccaggtggttgtgatttaccaaataatttagatcaagtt 90


Query: 1347 agatcactttc 1357
|||||||||||
Sbjct: 89 agatcactttc 79

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,409,728,272
Number of extensions: 81629142
Number of successful extensions: 6548181
Number of sequences better than 10.0: 397
Length of query: 1434
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1410
Effective length of database: 97,308,875,965
Effective search space: 137205515110650
Effective search space used: 137205515110650
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.26
Homology vs Protein
Query= Contig-U09569-1 (Contig-U09569-1Q) /CSM_Contig/Contig-U09569-1Q.Seq.d
(1434 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AK070496_1(AK070496|pid:none) Oryza sativa Japonica Group cDNA c... 152 1e-67
EU964441_1(EU964441|pid:none) Zea mays clone 278922 prolyl carbo... 145 4e-66
FB848276_1(FB848276|pid:none) Sequence 67549 from Patent WO20080... 145 6e-66
FB848274_1(FB848274|pid:none) Sequence 67547 from Patent WO20080... 141 1e-65
EF085613_1(EF085613|pid:none) Picea sitchensis clone WS0289_O21 ... 153 3e-65
FB848280_1(FB848280|pid:none) Sequence 67553 from Patent WO20080... 144 6e-65
BT030459_1(BT030459|pid:none) Arabidopsis thaliana At4g36190 mRN... 143 1e-64
AK176014_1(AK176014|pid:none) Arabidopsis thaliana mRNA for prol... 139 3e-64
AK175200_1(AK175200|pid:none) Arabidopsis thaliana mRNA for prol... 139 3e-64
AK176922_1(AK176922|pid:none) Arabidopsis thaliana mRNA for prol... 139 4e-64
AP008216_1034(AP008216|pid:none) Oryza sativa (japonica cultivar... 146 7e-64
AK176216_1(AK176216|pid:none) Arabidopsis thaliana mRNA for prol... 139 9e-64
EF147757_1(EF147757|pid:none) Populus trichocarpa clone WS0124_N... 145 2e-63
AC073867_7(AC073867|pid:none) Oryza sativa chromosome 10 BAC OSJ... 146 2e-61
BT055044_1(BT055044|pid:none) Zea mays full-length cDNA clone ZM... 133 4e-60
FB848298_1(FB848298|pid:none) Sequence 67571 from Patent WO20080... 131 7e-60
AL022141_8(AL022141|pid:none) Arabidopsis thaliana DNA chromosom... 132 7e-57
AC174351_16(AC174351|pid:none) Medicago truncatula clone mth2-7h... 122 1e-51
AK073197_1(AK073197|pid:none) Oryza sativa Japonica Group cDNA c... 122 7e-51
AC087192_20(AC087192|pid:none) Oryza sativa chromosome 10 BAC OS... 119 1e-32
BC108759_1(BC108759|pid:none) Xenopus laevis hypothetical protei... 132 2e-29
AK117113_1(AK117113|pid:none) Arabidopsis thaliana At4g36190 mRN... 128 4e-28
BC161646_1(BC161646|pid:none) Xenopus tropicalis hypothetical pr... 128 6e-28
BC133755_1(BC133755|pid:none) Xenopus laevis hypothetical LOC495... 124 6e-27
AE014296_1236(AE014296|pid:none) Drosophila melanogaster chromos... 124 1e-26
AM411657_1(AM411657|pid:none) Plasmodiophora brassicae ORF1 DNA ... 118 5e-25
S44851(S44851)K12H4.7 protein - Caenorhabditis elegans 118 6e-25
L14331_6(L14331|pid:none) Caenorhabditis elegans cosmid K12H4, c... 118 6e-25
(P34528) RecName: Full=Putative serine protease K12H4.7; ... 118 6e-25
AY058177_1(AY058177|pid:none) Arabidopsis thaliana At2g24280/F27... 111 6e-23
BT080886_1(BT080886|pid:none) Caligus clemensi clone ccle-evs-50... 111 6e-23
BT076193_1(BT076193|pid:none) Caligus rogercresseyi clone crog-e... 109 2e-22
CP000590_55(CP000590|pid:none) Ostreococcus lucimarinus CCE9901 ... 108 6e-22
T16490(T16490)hypothetical protein F56F10.1 - Caenorhabditis ele... 106 2e-21
(P90893) RecName: Full=Putative serine protease F56F10.1; ... 106 2e-21
(Q5RBU7) RecName: Full=Lysosomal Pro-X carboxypeptidase; ... 104 7e-21
AK312919_1(AK312919|pid:none) Homo sapiens cDNA, FLJ93368, highl... 102 3e-20
AM448616_1(AM448616|pid:none) Vitis vinifera contig VV78X081228.... 100 1e-19
EF677907_1(EF677907|pid:none) Picea sitchensis clone WS0278_A06 ... 100 1e-19
EF710656_15(EF710656|pid:none) Glyptapanteles indiensis clone BA... 100 1e-19
BC104722_1(BC104722|pid:none) Rattus norvegicus protease, serine... 100 2e-19
BC026424_1(BC026424|pid:none) Mus musculus prolylcarboxypeptidas... 100 2e-19
(Q7TMR0) RecName: Full=Lysosomal Pro-X carboxypeptidase; ... 100 2e-19
AE014297_2752(AE014297|pid:none) Drosophila melanogaster chromos... 100 2e-19
(Q9NQE7) RecName: Full=Thymus-specific serine protease; ... 99 3e-19
AK091786_1(AK091786|pid:none) Homo sapiens cDNA FLJ34467 fis, cl... 99 4e-19
EF710650_10(EF710650|pid:none) Glyptapanteles flavicoxis clone B... 99 5e-19
(Q2TA14) RecName: Full=Lysosomal Pro-X carboxypeptidase; ... 99 5e-19
(Q9QXE5) RecName: Full=Thymus-specific serine protease; ... 98 8e-19
AK228101_1(AK228101|pid:none) Arabidopsis thaliana mRNA for lyso... 97 1e-18
BT083779_1(BT083779|pid:none) Zea mays full-length cDNA clone ZM... 97 2e-18
DQ507338_1(DQ507338|pid:none) Belgica antarctica clone Ba-D02 CG... 96 2e-18
EU969341_1(EU969341|pid:none) Zea mays clone 328878 lysosomal Pr... 95 5e-18
AE014297_2751(AE014297|pid:none) Drosophila melanogaster chromos... 93 2e-17
EF676497_1(EF676497|pid:none) Picea sitchensis clone WS02739_M20... 93 3e-17
S44886(S44886)ZK112.1 protein - Caenorhabditis elegans 92 5e-17
(P34610) RecName: Full=Putative serine protease pcp-1; ... 92 5e-17
AP003371_2(AP003371|pid:none) Oryza sativa Japonica Group genomi... 92 5e-17
AB010075_11(AB010075|pid:none) Arabidopsis thaliana genomic DNA,... 89 5e-16
FN315329_1(FN315329|pid:none) Schistosoma japonicum isolate Anhu... 87 1e-15
FN315333_1(FN315333|pid:none) Schistosoma japonicum isolate Anhu... 87 1e-15
FN315327_1(FN315327|pid:none) Schistosoma japonicum isolate Anhu... 87 1e-15
CT956057_5(CT956057|pid:none) Zebrafish DNA sequence from clone ... 87 2e-15
CT956057_3(CT956057|pid:none) Zebrafish DNA sequence from clone ... 87 2e-15
BC090719_1(BC090719|pid:none) Danio rerio dipeptidyl-peptidase 7... 87 2e-15
AY084941_1(AY084941|pid:none) Arabidopsis thaliana clone 122449 ... 87 2e-15
BC095721_1(BC095721|pid:none) Danio rerio dipeptidyl-peptidase 7... 87 2e-15
FJ168548_4(FJ168548|pid:none) Bodo saltans clone fosmid 14L17, c... 86 3e-15
FN315331_1(FN315331|pid:none) Schistosoma japonicum isolate Anhu... 86 3e-15
AC134048_14(AC134048|pid:none) Oryza sativa (japonica cultivar-g... 86 3e-15
AE017346_10(AE017346|pid:none) Cryptococcus neoformans var. neof... 86 3e-15
AM487379_1(AM487379|pid:none) Vitis vinifera contig VV78X237931.... 86 4e-15
FJ387009_1(FJ387009|pid:none) Trichoplax adhaerens prolylcarboxy... 86 4e-15
AM691747_1(AM691747|pid:none) Haemonchus contortus mRNA for inte... 85 6e-15
AM270273_11(AM270273|pid:none) Aspergillus niger contig An12c017... 85 7e-15
AM487379_2(AM487379|pid:none) Vitis vinifera contig VV78X237931.... 84 1e-14
T19048(T19048;T21307) probable Pro-X carboxypeptidase F23B2.12 -... 84 2e-14
AE014134_3349(AE014134|pid:none) Drosophila melanogaster chromos... 82 4e-14
AL021808_1(AL021808|pid:none) Human DNA sequence from clone XXba... 81 8e-14
BC149045_1(BC149045|pid:none) Bos taurus dipeptidyl-peptidase 7,... 80 2e-13
AE017346_9(AE017346|pid:none) Cryptococcus neoformans var. neofo... 78 7e-13
DQ902585_1(DQ902585|pid:none) Clonorchis sinensis clone cs005d04... 78 9e-13
AY305022_1(AY305022|pid:none) Homo sapiens thymus specific serin... 78 9e-13
BT022905_1(BT022905|pid:none) Drosophila melanogaster IP12634 fu... 77 1e-12
AE014297_2753(AE014297|pid:none) Drosophila melanogaster chromos... 77 1e-12
(Q9ET22) RecName: Full=Dipeptidyl-peptidase 2; EC=3.4.1... 77 2e-12
AK292112_1(AK292112|pid:none) Homo sapiens cDNA FLJ75894 complet... 75 6e-12
AM270168_6(AM270168|pid:none) Aspergillus niger contig An08c0130... 75 6e-12
CU633438_554(CU633438|pid:none) Podospora anserina genomic DNA c... 75 8e-12
CR857236_1(CR857236|pid:none) Pongo abelii mRNA; cDNA DKFZp469H0... 74 1e-11
BT025375_1(BT025375|pid:none) Bos taurus protease, serine, 16 (t... 74 1e-11
CU633454_155(CU633454|pid:none) Podospora anserina genomic DNA c... 73 2e-11
AF154502_1(AF154502|pid:none) Homo sapiens quiescent cell prolin... 73 2e-11
(Q9UHL4) RecName: Full=Dipeptidyl-peptidase 2; EC=3.4.1... 73 3e-11
T19963(T19963)hypothetical protein C46C2.4 - Caenorhabditis eleg... 70 1e-10
AM920429_33(AM920429|pid:none) Penicillium chrysogenum Wisconsin... 69 3e-10
CP001575_192(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 63 2e-08
EF677886_1(EF677886|pid:none) Picea sitchensis clone WS0277_G16 ... 63 2e-08
AM270312_8(AM270312|pid:none) Aspergillus niger contig An14c0040... 60 2e-07
AE014297_2758(AE014297|pid:none) Drosophila melanogaster chromos... 59 4e-07
EF147644_1(EF147644|pid:none) Populus trichocarpa clone WS0124_A... 59 6e-07
BT037068_1(BT037068|pid:none) Zea mays full-length cDNA clone ZM... 58 7e-07
AY305024_1(AY305024|pid:none) Homo sapiens thymus specific serin... 55 6e-06
EU953457_1(EU953457|pid:none) Zea mays clone 1413847 unknown mRNA. 54 1e-05
AM776397_1(AM776397|pid:none) Anopheles gambiae partial ENSANGG0... 53 2e-05
BT057614_1(BT057614|pid:none) Salmo salar clone ssal-eve-526-235... 52 4e-05
BT037758_1(BT037758|pid:none) Zea mays full-length cDNA clone ZM... 51 9e-05
AP007171_298(AP007171|pid:none) Aspergillus oryzae RIB40 genomic... 50 2e-04
AP007155_759(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 45 0.005
AB171496_1(AB171496|pid:none) Macaca fascicularis brain cDNA clo... 45 0.006
U40801_7(U40801|pid:none) Caenorhabditis elegans cosmid F28E10, ... 43 0.025
AC174351_15(AC174351|pid:none) Medicago truncatula clone mth2-7h... 41 0.12
FJ946987_3(FJ946987|pid:none) Pseudomonas syringae pv. tabaci st... 39 0.36
AM236084_271(AM236084|pid:none) Rhizobium leguminosarum bv. vici... 39 0.61
CP000058_1203(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 39 0.61
AX884267_1(AX884267|pid:none) Sequence 130 from Patent EP1033401. 38 1.0
AY305023_1(AY305023|pid:none) Homo sapiens thymus specific serin... 36 3.0
AY062933_5(AY062933|pid:none) Polytomella parva strain UTEX L 19... 36 3.9
(Q93105) RecName: Full=Insulin-like receptor; Short=MIR... 36 3.9
CP000656_4497(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 35 5.2
CP000482_3507(CP000482|pid:none) Pelobacter propionicus DSM 2379... 35 8.8
AB071137_1(AB071137|pid:none) Photobacterium damselae subsp. pis... 35 8.8
CP000474_2102(CP000474|pid:none) Arthrobacter aurescens TC1, com... 35 8.8

>AK070496_1(AK070496|pid:none) Oryza sativa Japonica Group cDNA
clone:J023054G22, full insert sequence.
&AP008216_1033(AP008216|pid:none)
Length = 507

Score = 152 bits (383), Expect(2) = 1e-67
Identities = 86/242 (35%), Positives = 126/242 (52%), Gaps = 11/242 (4%)
Frame = +3

Query: 687 KQILQAESLVDIGDFFYWLADSMMEGDQYGYIDELCSPLVDAINSGTSGIDLITVY-SNY 863
KQ+ A +L + GDF + LAD+ QYG D LCSP+V+A +GT ++ Y +Y
Sbjct: 254 KQLFGASTLANDGDFLFLLADAAAIAFQYGNPDALCSPIVEAKKNGTDLVETFARYVKDY 313

Query: 864 TINTWGKVLGTPDEYSTAWQQNVTYDPSKSADRAWWYQTCSSLGWMQAAPSENSIRSSLV 1043
I T+G + + Y + +N T P++SA R WWYQ CS + + Q AP +S+RS+ +
Sbjct: 314 YIGTFGASVAS---YDQEYLKNTTPPPAESAYRLWWYQVCSEVAYFQVAPKNDSVRSAKI 370

Query: 1044 NMTYFQTHCQQLFGQAIWPPNVNAVNTQYGGDQSNPLLNAAGTNILFTNGHADPWSQASI 1223
+ Y C+ +FG+ ++ P+V N YGG + AG+ I+F NG DPW AS
Sbjct: 371 DTRYHLDLCRNVFGEGVY-PDVFMTNLYYGGTR------IAGSKIVFANGSQDPWRHASK 423

Query: 1224 VNSNYPNVEPSAMTTCRKCGHCVDLRGCP----------GGCDLPNNLDQVRSLSLKSIA 1373
S+ PS + C CGHC DL GCP C P +++VR + I
Sbjct: 424 QKSS--KELPSYLIECSNCGHCSDLSGCPQAPSHIEGDSSNCSSPEAVNKVRKQIVDHID 481

Query: 1374 QW 1379
W
Sbjct: 482 LW 483

Score = 130 bits (326), Expect(2) = 1e-67
Identities = 76/173 (43%), Positives = 99/173 (57%), Gaps = 7/173 (4%)
Frame = +1

Query: 169 QWFTQTLDHXXXXXXXXXXXKYYVNDQYYNYKNGGPIILYINGEGPVSSPPYSSDDGVVI 348
+W QTLDH +YY YY G PI LYI GE + P S + +
Sbjct: 55 RWMDQTLDHFNPTDHRQFKQRYYEFLDYYRAPKG-PIFLYICGESSCNGIPNSY---LAV 110

Query: 349 YAQALNCMIVTLEHRFYGESSPFSELTIENLQYLSHQQALEDLATFVVDFQSKL------ 510
A+ +V+ EHR+YG+SSPF LT ENL++LS +QAL DLA F +Q L
Sbjct: 111 MAKKFGAAVVSPEHRYYGKSSPFESLTTENLRFLSSKQALFDLAVFRQYYQETLNAKYNR 170

Query: 511 VGAGHI-VTIGGSYSGALSAWFRIKYPHITVGSIASLGVVHSILDFTAFDAYV 666
GA GGSY+GALSAWFR+K+PH+T GS+AS GVV S+ ++T FD +
Sbjct: 171 SGADSSWFVFGGSYAGALSAWFRLKFPHLTCGSLASSGVVLSVYNYTDFDKQI 223

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,202,082,327
Number of extensions: 43746015
Number of successful extensions: 107237
Number of sequences better than 10.0: 123
Number of HSP's gapped: 106912
Number of HSP's successfully gapped: 215
Length of query: 478
Length of database: 1,040,966,779
Length adjustment: 132
Effective length of query: 346
Effective length of database: 618,001,159
Effective search space: 213828401014
Effective search space used: 213828401014
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.45 gvh: 0.49 alm: 0.25 top: -0.07 tms: 0.07 mit: 0.31 mip: 0.03
nuc: 0.10 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 1.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

24.0 %: mitochondrial
16.0 %: cytoplasmic
16.0 %: nuclear
16.0 %: endoplasmic reticulum
12.0 %: Golgi
4.0 %: vacuolar
4.0 %: extracellular, including cell wall
4.0 %: vesicles of secretory system
4.0 %: peroxisomal

>> prediction for Contig-U09569-1 is mit

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 8
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0