| Contig-U09523-1 |
| Contig ID |
Contig-U09523-1 |
| Contig update |
2002. 9.13 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
934 |
| Chromosome number (1..6, M) |
5 |
| Chromosome length |
5062330 |
| Start point |
1676805 |
| End point |
1677740 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
1 |
| Number of EST |
2 |
| Link to clone list |
U09523 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.16 |
| Homology vs DNA |
Query= Contig-U09523-1 (Contig-U09523-1Q) /CSM_Contig/Contig-U09523-1Q.Seq.d
(944 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU075033) Dictyostelium discoideum slug cDNA, clone SSM778. 222 2e-53 1
(C93386) Dictyostelium discoideum slug cDNA, clone SSM778. 165 6e-39 2
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 38 0.036 9
(EY146207) CBTN10240.b1_O16.ab1:P Triphysaria pusilla root t... 52 0.039 1
(AC098007) Rattus norvegicus clone CH230-105P19, *** SEQUENC... 38 0.056 3
(ET865368) CHO_OF193xd14r1.ab1 CHO_OF Nicotiana tabacum geno... 50 0.15 1
(AU053960) Dictyostelium discoideum slug cDNA, clone SLK301. 34 0.24 3
(CU041224) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 0.34 2
(BJ427345) Dictyostelium discoideum cDNA clone:ddv62j02, 5' ... 40 0.40 2
(CP000881) Hemiselmis andersenii chromosome 1, complete sequ... 48 0.50 5
(BV360811) S231P6465FF3.T0 BedlingtonTerrier Canis familiari... 36 0.54 3
(CU469147) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.61 1
(EG622575) EMBRYOF088221I17 POSSUM_01-POSSUM-C-EMBRYO-2KB Tr... 48 0.61 1
(DY971094) CLSM4569.b1_B16.ab1 CLS(LMS) lettuce sativa Lactu... 48 0.61 1
(ED032154) SBA031_I01.f Sugar beet BAC library USH20 (Code S... 36 1.1 3
(AU060144) Dictyostelium discoideum slug cDNA, clone SLA428. 38 1.4 2
(BJ389534) Dictyostelium discoideum cDNA clone:dds19i05, 5' ... 44 1.5 2
(BJ325498) Dictyostelium discoideum cDNA clone:dda14h22, 5' ... 44 1.5 2
(BJ387527) Dictyostelium discoideum cDNA clone:dds3m04, 5' e... 44 1.5 2
(BJ323532) Dictyostelium discoideum cDNA clone:dda11e06, 5' ... 44 1.5 2
(BJ389782) Dictyostelium discoideum cDNA clone:dds20d06, 5' ... 44 1.5 2
(BJ326818) Dictyostelium discoideum cDNA clone:dda18k02, 5' ... 44 1.5 2
(BJ327306) Dictyostelium discoideum cDNA clone:dda19p22, 5' ... 44 1.5 2
(AL452937) T. brucei sheared genomic DNA clone 26d08, revers... 34 1.5 3
(BJ329249) Dictyostelium discoideum cDNA clone:dda24g08, 5' ... 44 1.5 2
(BJ329759) Dictyostelium discoideum cDNA clone:dda26n04, 5' ... 44 1.5 2
(BJ330227) Dictyostelium discoideum cDNA clone:dda27e22, 5' ... 44 1.5 2
(BJ361447) Dictyostelium discoideum cDNA clone:ddc17n03, 5' ... 44 1.5 2
(BJ361763) Dictyostelium discoideum cDNA clone:ddc18l13, 5' ... 44 1.5 2
(BJ328686) Dictyostelium discoideum cDNA clone:dda29h02, 5' ... 44 1.5 2
(BJ328214) Dictyostelium discoideum cDNA clone:dda23i10, 5' ... 44 1.5 2
(BJ324700) Dictyostelium discoideum cDNA clone:dda7f15, 5' e... 44 1.5 2
(BJ328416) Dictyostelium discoideum cDNA clone:dda28h04, 5' ... 44 1.5 2
(BJ412813) Dictyostelium discoideum cDNA clone:ddv9o23, 5' e... 44 1.5 2
(BJ362274) Dictyostelium discoideum cDNA clone:ddc21i01, 5' ... 44 1.5 2
(BJ329181) Dictyostelium discoideum cDNA clone:dda24h02, 5' ... 44 1.5 2
(BJ327166) Dictyostelium discoideum cDNA clone:dda19n10, 5' ... 44 1.5 2
(BJ325145) Dictyostelium discoideum cDNA clone:dda9o23, 5' e... 44 1.5 2
(BJ323372) Dictyostelium discoideum cDNA clone:dda10d07, 5' ... 44 1.5 2
(BJ389846) Dictyostelium discoideum cDNA clone:dds20d09, 5' ... 44 1.5 2
(BJ329218) Dictyostelium discoideum cDNA clone:dda24p04, 5' ... 44 1.5 2
(BJ324588) Dictyostelium discoideum cDNA clone:dda7d03, 5' e... 44 1.5 2
(BJ327969) Dictyostelium discoideum cDNA clone:dda22m12, 5' ... 44 1.5 2
(BJ327290) Dictyostelium discoideum cDNA clone:dda19l22, 5' ... 44 1.5 2
(BJ390977) Dictyostelium discoideum cDNA clone:dds14a15, 5' ... 44 1.6 2
(BJ390335) Dictyostelium discoideum cDNA clone:dds22f01, 5' ... 44 1.6 2
(BJ386823) Dictyostelium discoideum cDNA clone:dds10h22, 5' ... 44 1.6 2
(BJ324143) Dictyostelium discoideum cDNA clone:dda5c03, 5' e... 44 1.6 2
(BJ329102) Dictyostelium discoideum cDNA clone:dda30e21, 5' ... 44 1.6 2
(BJ324522) Dictyostelium discoideum cDNA clone:dda6p14, 5' e... 44 1.6 2
(BJ326289) Dictyostelium discoideum cDNA clone:dda15o03, 5' ... 44 1.6 2
(BJ324665) Dictyostelium discoideum cDNA clone:dda7l11, 5' e... 44 1.6 2
(BJ325186) Dictyostelium discoideum cDNA clone:dda13m02, 5' ... 44 1.6 2
(BJ387037) Dictyostelium discoideum cDNA clone:dds12d02, 5' ... 44 1.6 2
(BB045998) Mus musculus 13 days embryo male testis cDNA, RIK... 44 1.6 2
(BJ390352) Dictyostelium discoideum cDNA clone:dds22i02, 5' ... 44 1.6 2
(BJ325168) Dictyostelium discoideum cDNA clone:dda13f04, 5' ... 44 1.6 2
(BJ325910) Dictyostelium discoideum cDNA clone:dda2o23, 5' e... 44 1.6 2
(CV748763) SJL1-002_G07_SJL1-002G07-T7_052.ab1 SJL Schistoso... 38 1.6 2
(AU060984) Dictyostelium discoideum slug cDNA, clone SLC513. 44 1.6 2
(BJ325896) Dictyostelium discoideum cDNA clone:dda2i22, 5' e... 44 1.7 2
(BU718208) SJM2CGG12 SJM Schistosoma japonicum cDNA, mRNA se... 38 1.7 2
(CV756415) sjl6-008_H12_sjl6-008H12-T7_104.ab1 SJL Schistoso... 38 1.8 2
(CV758336) sjl9-007_H10_sjl9-007H10-T3_092.ab1 SJL Schistoso... 38 1.8 2
(AY815126) Schistosoma japonicum SJCHGC05165 protein mRNA, c... 38 2.2 2
(AC162831) Bos taurus clone CH240-124K14, WORKING DRAFT SEQU... 46 2.4 1
(AC165126) Bos taurus clone CH240-164O7, WORKING DRAFT SEQUE... 46 2.4 1
(DE298262) Bombyx mori genomic DNA, BAC clone:BES_048_F17. 46 2.4 1
(AG482320) Mus musculus molossinus DNA, clone:MSMg01-377C20.... 46 2.4 1
(CE322133) tigr-gss-dog-17000360489777 Dog Library Canis lup... 46 2.4 1
(DC613426) Lethenteron japonicum cDNA, clone: Lamprey_liver_... 46 2.4 1
(AC011756) Drosophila melanogaster, chromosome 2L, region 36... 40 2.6 5
(Z73913) Human DNA sequence from clone LL0XNC01-61B11 on chr... 34 2.9 4
(AJ224893) Dictyostelium discoideum srfA gene. 32 3.4 3
(Z98866) Caenorhabditis elegans YAC Y49E10. 42 4.0 4
(AP003661) Mus musculus genomic DNA, chromosome 16q clone:RP... 42 4.1 4
(AU038072) Dictyostelium discoideum slug cDNA, clone SSH233. 38 4.5 2
(AP001851) Homo sapiens genomic DNA, chromosome 18q21 clone:... 40 5.0 3
(AC221022) Homo sapiens FOSMID clone ABC13-47642800N4 from c... 34 5.1 3
(AP001991) Homo sapiens genomic DNA, chromosome 18q21 clone:... 40 5.2 2
(BJ441521) Dictyostelium discoideum cDNA clone:ddv46p19, 3' ... 38 5.3 2
(BE240841) MD0902 Meloidogyne incognita J2 (#MD99-1) Meloido... 40 5.5 2
(AC140285) Mus musculus BAC clone RP24-559A5 from chromosome... 38 5.6 6
(AC115164) Rattus norvegicus clone CH230-116A6, *** SEQUENCI... 42 5.8 4
(BI745936) rm20e11.y1 Meloidogyne arenaria egg pAMP1 v1 Chia... 34 5.9 3
(AM642509) Entamoeba dispar GSS, clone dispar95b07.p1k. 34 6.1 2
(AM627270) Entamoeba dispar GSS, clone dispar20b04.q1k. 34 6.1 2
(EJ571946) 1092960050103 Global-Ocean-Sampling_GS-29-01-01-1... 40 6.7 2
(CR208370) Forward strand read from insert in 5'HPRT inserti... 36 7.6 2
(BX974558) Forward strand read from insert in 5'HPRT inserti... 36 7.6 2
(CR321585) mte1-48B3RM1 BAC end, cultivar Jemalong A17 of Me... 34 7.7 3
(CR007573) Forward strand read from insert in 5'HPRT inserti... 36 8.5 2
(CR936967) Zebrafish DNA sequence from clone DKEY-95J11 in l... 44 9.5 1
(AC163697) Gallus gallus BAC clone CH261-186A14 from chromos... 44 9.5 1
(AC159009) Gallus gallus BAC clone CH261-189M12 from chromos... 44 9.5 1
(BC089791) Rattus norvegicus nuclear transcription factor-Y ... 44 9.5 1
(AC158636) Mus musculus 10 BAC RP23-402A24 (Roswell Park Can... 44 9.5 1
(AC156641) Mus musculus BAC clone RP23-204J8 from chromosome... 44 9.5 1
(AC155709) Mus musculus 10 BAC RP24-200F4 (Roswell Park Canc... 44 9.5 1
(CS429715) Sequence 2622 from Patent WO2006100066. 44 9.5 1
>(AU075033) Dictyostelium discoideum slug cDNA, clone SSM778.
Length = 240
Score = 222 bits (112), Expect = 2e-53
Identities = 112/112 (100%)
Strand = Plus / Plus
Query: 129 tttcaaaaggaaaaactgtttgtatttacaacaacaacaatagcaatttaatcatgcaaa 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tttcaaaaggaaaaactgtttgtatttacaacaacaacaatagcaatttaatcatgcaaa 188
Query: 189 atccaagagcattagcaaatattagtaatcaagcaccttctttgcaaaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 atccaagagcattagcaaatattagtaatcaagcaccttctttgcaaaaaca 240
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 725,107,434
Number of extensions: 51022375
Number of successful extensions: 5854979
Number of sequences better than 10.0: 186
Length of query: 944
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 920
Effective length of database: 97,308,875,965
Effective search space: 89524165887800
Effective search space used: 89524165887800
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.26 |
| Homology vs Protein |
Query= Contig-U09523-1 (Contig-U09523-1Q) /CSM_Contig/Contig-U09523-1Q.Seq.d
(944 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR382139_551(CR382139|pid:none) Debaryomyces hansenii strain CBS... 46 0.002
(P58301) RecName: Full=DNA double-strand break repair rad50 ATPa... 43 0.014
AL844505_160(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 43 0.018
AL844508_299(AL844508|pid:none) Plasmodium falciparum 3D7 chromo... 42 0.023
BX537985_1(BX537985|pid:none) Homo sapiens mRNA; cDNA DKFZp686D0... 42 0.030
(Q54EQ9) RecName: Full=Putative uncharacterized protein DDB_G029... 42 0.039
AP008218_22(AP008218|pid:none) Oryza sativa (japonica cultivar-g... 42 0.039
BC144320_1(BC144320|pid:none) Homo sapiens coiled-coil domain co... 41 0.052
AB201172_1(AB201172|pid:none) Homo sapiens GRDN mRNA for girdin,... 41 0.052
BX648138_1(BX648138|pid:none) Homo sapiens mRNA; cDNA DKFZp686H0... 41 0.052
BC132736_1(BC132736|pid:none) Homo sapiens coiled-coil domain co... 41 0.052
(Q3V6T2) RecName: Full=Girdin; AltName: Full=Girders of actin fi... 41 0.052
CR940353_310(CR940353|pid:none) Theileria annulata strain Ankara... 41 0.052
CP000123_229(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 41 0.067
FN357322_14(FN357322|pid:none) Schistosoma mansoni genome sequen... 40 0.088
(Q55FA4) RecName: Full=Probable DNA-directed RNA polymerase I su... 40 0.088
AL009126_2219(AL009126|pid:none) Bacillus subtilis subsp. subtil... 40 0.088
FN357322_15(FN357322|pid:none) Schistosoma mansoni genome sequen... 40 0.088
AC115592_2(AC115592|pid:none) Dictyostelium discoideum chromosom... 40 0.11
FM992689_130(FM992689|pid:none) Candida dubliniensis CD36 chromo... 40 0.11
AE014187_421(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 40 0.11
AE014188_55(AE014188|pid:none) Plasmodium falciparum 3D7 chromos... 40 0.15
AE015927_2041(AE015927|pid:none) Clostridium tetani E88, complet... 40 0.15
CP000939_3233(CP000939|pid:none) Clostridium botulinum B1 str. O... 39 0.20
CP000111_809(CP000111|pid:none) Prochlorococcus marinus str. MIT... 39 0.20
(O42657) RecName: Full=GRIP and coiled-coil domain-containing pr... 39 0.20
AC116956_10(AC116956|pid:none) Dictyostelium discoideum chromoso... 39 0.20
AY394534_1(AY394534|pid:none) Streptococcus pyogenes strain NS23... 39 0.26
AY139414_1(AY139414|pid:none) Streptococcus pyogenes isolate NS2... 39 0.26
AY394503_1(AY394503|pid:none) Streptococcus pyogenes strain NS10... 39 0.26
AY394507_1(AY394507|pid:none) Streptococcus pyogenes strain NS12... 39 0.26
AE014186_199(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.26
CR548612_341(CR548612|pid:none) Paramecium tetraurelia macronucl... 39 0.26
AY394509_1(AY394509|pid:none) Streptococcus pyogenes strain NS13... 39 0.26
S28061(S28061) SCP1 protein - rat &X67805_1(X67805|pid:none) 39 0.26
CP001401_1855(CP001401|pid:none) Sulfolobus islandicus M.16.27, ... 39 0.26
EF460480_1(EF460480|pid:none) Streptococcus pyogenes M protein (... 39 0.26
CR380953_99(CR380953|pid:none) Candida glabrata strain CBS138 ch... 39 0.26
(Q03410) RecName: Full=Synaptonemal complex protein 1; ... 39 0.26
CP000123_228(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 39 0.33
CP000609_236(CP000609|pid:none) Methanococcus maripaludis C5, co... 39 0.33
AY906859_11(AY906859|pid:none) Erwinia amylovora strain Ea321 Rl... 39 0.33
AL844505_136(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.33
CR940348_262(CR940348|pid:none) Theileria annulata strain Ankara... 39 0.33
CR382399_52(CR382399|pid:none) Plasmodium falciparum chromosome ... 39 0.33
AB220160_1(AB220160|pid:none) Tetrahymena thermophila BNI1 mRNA ... 38 0.44
AC114263_52(AC114263|pid:none) Dictyostelium discoideum chromoso... 38 0.44
CP000123_803(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 38 0.44
AL844505_292(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 38 0.44
BA000021_579(BA000021|pid:none) Wigglesworthia glossinidia endos... 38 0.44
CR382401_38(CR382401|pid:none) Plasmodium falciparum chromosome ... 38 0.44
EF028068_1(EF028068|pid:none) Felis catus centrosomal protein ce... 38 0.44
CP000575_1274(CP000575|pid:none) Staphylothermus marinus F1, com... 38 0.57
AY335689_1(AY335689|pid:none) Synthetic construct Homo sapiens s... 38 0.57
CP001173_499(CP001173|pid:none) Helicobacter pylori G27, complet... 38 0.57
AL844506_105(AL844506|pid:none) Plasmodium falciparum 3D7 chromo... 38 0.57
AK022960_1(AK022960|pid:none) Homo sapiens cDNA FLJ12898 fis, cl... 38 0.57
AL844506_233(AL844506|pid:none) Plasmodium falciparum 3D7 chromo... 38 0.57
AE002114_13(AE002114|pid:none) Ureaplasma parvum serovar 3 str. ... 38 0.57
AE014185_77(AE014185|pid:none) Plasmodium falciparum 3D7 chromos... 38 0.57
(P61584) RecName: Full=Rho-associated protein kinase 1; ... 38 0.57
BC070077_1(BC070077|pid:none) Homo sapiens serine/threonine kina... 38 0.57
CP000013_822(CP000013|pid:none) Borrelia garinii PBi, complete g... 38 0.57
(Q13464) RecName: Full=Rho-associated protein kinase 1; ... 38 0.57
(Q8I3Z1) RecName: Full=MATH and LRR domain-containing protein PF... 37 0.74
AL844502_30(AL844502|pid:none) Plasmodium falciparum 3D7 chromos... 37 0.74
AF019980_1(AF019980|pid:none) Dictyostelium discoideum ZipA (zip... 37 0.74
CR548612_23(CR548612|pid:none) Paramecium tetraurelia macronucle... 37 0.74
AJ276471_1(AJ276471|pid:none) Tetrahymena thermophila mRNA for t... 37 0.74
(Q54MB1) RecName: Full=Uncharacterized SDCCAG3 family protein; 37 0.74
T18423(T18423)hypothetical protein C0150w - malaria parasite (Pl... 37 0.74
AM910995_58(AM910995|pid:none) Plasmodium knowlesi strain H chro... 37 0.74
AL844507_72(AL844507|pid:none) Plasmodium falciparum 3D7 chromos... 37 0.74
(P35458) RecName: Full=Dynactin subunit 1; AltName: Full=150 kDa... 37 0.97
X53947_1(X53947|pid:none) Yeast MYO1 gene for myosin heavy chain... 37 0.97
AL844509_541(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 37 0.97
BC113114_1(BC113114|pid:none) Homo sapiens Rho-associated, coile... 37 0.97
AY229987_101(AY229987|pid:none) Cryptophlebia leucotreta granulo... 37 0.97
AL034559_29(AL034559|pid:none) Plasmodium falciparum MAL3P7, com... 37 0.97
A41642(A41642)dynactin - chicken 37 0.97
(Q03390) RecName: Full=Vacuolar protein-sorting-associated prote... 37 0.97
FM204884_1293(FM204884|pid:none) Streptococcus equi subsp. zooep... 37 0.97
AC114265_7(AC114265|pid:none) Dictyostelium discoideum chromosom... 37 0.97
AY558173_1(AY558173|pid:none) Saccharomyces cerevisiae clone FLH... 37 0.97
CP000878_927(CP000878|pid:none) Prochlorococcus marinus str. MIT... 37 1.3
BC051733_1(BC051733|pid:none) Homo sapiens leucine zipper protei... 37 1.3
CP000393_487(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 37 1.3
(Q54G05) RecName: Full=Putative leucine-rich repeat-containing p... 37 1.3
AP005384_12(AP005384|pid:none) Oryza sativa Japonica Group genom... 37 1.3
BX548174_847(BX548174|pid:none) Prochlorococcus marinus MED4 com... 37 1.3
A71607(A71607) Mtn3/RAG1IP-like protein PFB0760w - malaria paras... 37 1.3
AL031428_1(AL031428|pid:none) Human DNA sequence from clone RP1-... 37 1.3
(Q04279) RecName: Full=Uncharacterized protein YMR086W; &S54461... 37 1.3
(Q86V48) RecName: Full=Leucine zipper protein 1; 37 1.3
(Q49XE1) RecName: Full=Nuclease sbcCD subunit C; &AP008934_1411... 37 1.3
BX284634_2(BX284634|pid:none) Mouse DNA sequence from clone RP23... 37 1.3
BC155436_1(BC155436|pid:none) Xenopus tropicalis homer homolog 1... 37 1.3
FJ531864_1(FJ531864|pid:none) Streptococcus sp. 'group C' isolat... 37 1.3
CP001108_451(CP001108|pid:none) Prosthecochloris aestuarii DSM 2... 37 1.3
CP000393_486(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 37 1.3
CP000049_13(CP000049|pid:none) Borrelia turicatae 91E135, comple... 36 1.7
(Q5SNZ0) RecName: Full=Girdin; AltName: Full=Girders of actin fi... 36 1.7
CP001083_3261(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 36 1.7
AL111168_40(AL111168|pid:none) Campylobacter jejuni subsp. jejun... 36 1.7
AL844504_216(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 36 1.7
A70204(A70204) endopeptidase Clp (EC 3.4.21.-) ATP-binding chain... 36 1.7
L41069_1(L41069|pid:none) Mus musculus testicular protein mRNA, ... 36 1.7
CP001287_2223(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 36 1.7
CP000302_1716(CP000302|pid:none) Shewanella denitrificans OS217,... 36 1.7
AB087827_1(AB087827|pid:none) Mus musculus mRNA for hypothetical... 36 1.7
CP001205_796(CP001205|pid:none) Borrelia burgdorferi ZS7, comple... 36 1.7
AE014185_193(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 36 1.7
CP000743_970(CP000743|pid:none) Methanococcus aeolicus Nankai-3,... 36 1.7
EF418585_1(EF418585|pid:none) Equine infectious anemia virus str... 36 1.7
BA000023_2280(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 36 1.7
AP009552_3691(AP009552|pid:none) Microcystis aeruginosa NIES-843... 36 1.7
AE009950_493(AE009950|pid:none) Pyrococcus furiosus DSM 3638, co... 36 1.7
AK172261_1(AK172261|pid:none) Mus musculus activated spleen cDNA... 36 2.2
AY327491_1(AY327491|pid:none) Penaeus monodon signal transducer ... 36 2.2
CP000140_3068(CP000140|pid:none) Parabacteroides distasonis ATCC... 36 2.2
AE017333_1719(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 36 2.2
CP001364_2884(CP001364|pid:none) Chloroflexus sp. Y-400-fl, comp... 36 2.2
AJ245435_1(AJ245435|pid:none) Plasmodium falciparum gc-alpha gen... 36 2.2
AK157867_1(AK157867|pid:none) Mus musculus adult inner ear cDNA,... 36 2.2
AC115604_4(AC115604|pid:none) Dictyostelium discoideum chromosom... 36 2.2
EU367985_1(EU367985|pid:none) Penaeus monodon STAT long form mRN... 36 2.2
AY029758_1(AY029758|pid:none) Petunia integrifolia kinase intera... 36 2.2
AL844508_220(AL844508|pid:none) Plasmodium falciparum 3D7 chromo... 36 2.2
A45592(S24597;A45592;S29393;S34842;B45592;C45592;D45592) liver s... 36 2.2
(O08788) RecName: Full=Dynactin subunit 1; AltName: Full=150 kDa... 36 2.2
CP000767_1433(CP000767|pid:none) Campylobacter curvus 525.92, co... 36 2.2
CP001337_3594(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 36 2.2
AK171376_1(AK171376|pid:none) Mus musculus B6-derived CD11 +ve d... 36 2.2
(Q04EE1) RecName: Full=Chaperone protein dnaK; AltName: Full=Hea... 35 2.8
CR548612_282(CR548612|pid:none) Paramecium tetraurelia macronucl... 35 2.8
FJ406871_1(FJ406871|pid:none) Plasmodium falciparum isolate RO33... 35 2.8
AE014185_52(AE014185|pid:none) Plasmodium falciparum 3D7 chromos... 35 2.8
AE014187_162(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 35 2.8
CR382126_820(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 35 2.8
AL844504_75(AL844504|pid:none) Plasmodium falciparum 3D7 chromos... 35 2.8
FJ406867_1(FJ406867|pid:none) Plasmodium falciparum isolate W2me... 35 2.8
FM204883_2083(FM204883|pid:none) Streptococcus equi subsp. equi ... 35 2.8
AE015935_6(AE015935|pid:none) Staphylococcus epidermidis ATCC 12... 35 2.8
AY191013_1(AY191013|pid:none) Dictyostelium discoideum autophagy... 35 2.8
FJ406878_1(FJ406878|pid:none) Plasmodium falciparum isolate Dd2 ... 35 2.8
AM778934_55(AM778934|pid:none) Microcystis aeruginosa PCC 7806 g... 35 2.8
FJ406880_1(FJ406880|pid:none) Plasmodium falciparum isolate D6 P... 35 2.8
(Q6NRC9) RecName: Full=Leucine-rich repeat and coiled-coil domai... 35 2.8
FJ406868_1(FJ406868|pid:none) Plasmodium falciparum isolate T9/1... 35 2.8
FJ406866_1(FJ406866|pid:none) Plasmodium falciparum isolate Well... 35 2.8
BC036053_1(BC036053|pid:none) Homo sapiens coiled-coil domain co... 35 2.8
CP000383_975(CP000383|pid:none) Cytophaga hutchinsonii ATCC 3340... 35 2.8
CP000771_1509(CP000771|pid:none) Fervidobacterium nodosum Rt17-B... 35 2.8
FN392322_234(FN392322|pid:none) Pichia pastoris GS115 chromosome... 35 2.8
AE015927_481(AE015927|pid:none) Clostridium tetani E88, complete... 35 2.8
CP001147_631(CP001147|pid:none) Thermodesulfovibrio yellowstonii... 35 2.8
AL844509_183(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 35 2.8
CP000361_106(CP000361|pid:none) Arcobacter butzleri RM4018, comp... 35 2.8
FJ406865_1(FJ406865|pid:none) Plasmodium falciparum isolate 3D7 ... 35 2.8
AE014185_349(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 35 2.8
AL844505_233(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 35 2.8
FJ406869_1(FJ406869|pid:none) Plasmodium falciparum isolate T9/9... 35 2.8
FJ406872_1(FJ406872|pid:none) Plasmodium falciparum isolate Palo... 35 2.8
(Q54IK9) RecName: Full=Protein hook homolog; AltName: Full=DdHk3; 35 2.8
(Q54WR4) RecName: Full=Phospholipase D B; EC=3.1.4.4; A... 35 2.8
FJ406874_1(FJ406874|pid:none) Plasmodium falciparum isolate K1 P... 35 2.8
(Q55CC5) RecName: Full=Beclin-1-like protein A; AltName: Full=Au... 35 2.8
CR548612_204(CR548612|pid:none) Paramecium tetraurelia macronucl... 35 2.8
AE014185_175(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 35 2.8
AJ890339_2(AJ890339|pid:none) Oenococcus oeni grpE gene, dnaK ge... 35 2.8
CP000312_1813(CP000312|pid:none) Clostridium perfringens SM101, ... 35 2.8
(Q8IYE0) RecName: Full=Coiled-coil domain-containing protein 146; 35 2.8
AF151684_1(AF151684|pid:none) Drosophila virilis gp150 (gp150) g... 35 3.7
EF568108_62(EF568108|pid:none) Glossina pallidipes salivary glan... 35 3.7
AE004969_620(AE004969|pid:none) Neisseria gonorrhoeae FA 1090, c... 35 3.7
FN357480_22(FN357480|pid:none) Schistosoma mansoni genome sequen... 35 3.7
(Q1T7C1) RecName: Full=Centromere protein K; Short=CENP... 35 3.7
(Q6PCJ1) RecName: Full=Dynactin subunit 1; &BC059305_1(BC059305... 35 3.7
T30336(T30336) nuclear/mitotic apparatus protein - African clawe... 35 3.7
AL929359_5(AL929359|pid:none) Plasmodium falciparum strain 3D7, ... 35 3.7
(Q60563) RecName: Full=Synaptonemal complex protein 1; ... 35 3.7
CR382137_815(CR382137|pid:none) Debaryomyces hansenii strain CBS... 35 3.7
CP000576_809(CP000576|pid:none) Prochlorococcus marinus str. MIT... 35 3.7
AY048212_1(AY048212|pid:none) Arabidopsis thaliana At2g07350/T13... 35 3.7
AL929356_73(AL929356|pid:none) Plasmodium falciparum strain 3D7,... 35 3.7
BX293980_421(BX293980|pid:none) Mycoplasma mycoides subsp. mycoi... 35 3.7
CR940348_84(CR940348|pid:none) Theileria annulata strain Ankara ... 35 3.7
CP000241_533(CP000241|pid:none) Helicobacter pylori HPAG1, compl... 35 3.7
AY380826_33(AY380826|pid:none) Lymphocystis disease virus - isol... 35 3.7
AF029788_1(AF029788|pid:none) Schizosaccharomyces pombe myosin-I... 35 3.7
AC123571_14(AC123571|pid:none) Medicago truncatula clone mth1-14... 35 3.7
AE014187_292(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 33 4.5
U36377_1(U36377|pid:none) Plasmodium falciparum mitogen-activate... 33 4.6
(O76329) RecName: Full=Interaptin; AltName: Full=Alpha-actinin B... 35 4.8
AL844509_266(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 35 4.8
CP000123_805(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 35 4.8
CP000099_369(CP000099|pid:none) Methanosarcina barkeri str. Fusa... 35 4.8
(Q14789) RecName: Full=Golgin subfamily B member 1; AltName: Ful... 35 4.8
(Q54SY5) RecName: Full=Putative uncharacterized protein DDB_G028... 35 4.8
FM992691_467(FM992691|pid:none) Candida dubliniensis CD36 chromo... 35 4.8
(Q9TU23) RecName: Full=Centrosomal protein of 290 kDa; ... 35 4.8
(B5RLZ3) RecName: Full=Chromosomal replication initiator protein... 35 4.8
BC098024_1(BC098024|pid:none) Rattus norvegicus similar to RIKEN... 35 4.8
EF100424_1(EF100424|pid:none) Plasmodium chabaudi strain AS-ART ... 35 4.8
AM920436_1757(AM920436|pid:none) Penicillium chrysogenum Wiscons... 35 4.8
AY502117_1(AY502117|pid:none) Rickettsia sp. A-167 surface antig... 35 4.8
AE014185_81(AE014185|pid:none) Plasmodium falciparum 3D7 chromos... 35 4.8
AL844506_138(AL844506|pid:none) Plasmodium falciparum 3D7 chromo... 35 4.8
AB371588_1(AB371588|pid:none) Homo sapiens GOLGB1 mRNA for golgi... 35 4.8
FN392320_1089(FN392320|pid:none) Pichia pastoris GS115 chromosom... 35 4.8
AC117072_76(AC117072|pid:none) Dictyostelium discoideum chromoso... 35 4.8
AL590447_143(AL590447|pid:none) chromosome VII of strain GB-M1 o... 35 4.8
AM422018_68(AM422018|pid:none) Candidatus Phytoplasma australien... 35 4.8
(P54697) RecName: Full=Myosin-J heavy chain; AltName: Full=Myosi... 35 4.8
T18278(T18278;T30579) myosin heavy chain [similarity] - slime mo... 35 4.8
AE014188_223(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 35 4.8
D25542_1(D25542|pid:none) Homo sapiens mRNA for golgi antigen gc... 35 4.8
AE014188_63(AE014188|pid:none) Plasmodium falciparum 3D7 chromos... 35 4.8
AC116956_15(AC116956|pid:none) Dictyostelium discoideum chromoso... 35 4.8
AE001362_47(AE001362|pid:none) Plasmodium falciparum 3D7 chromos... 35 4.8
A56539(A56539;S37536) giantin - human &X75304_1(X75304|pid:none) 35 4.8
AF041382_1(AF041382|pid:none) Drosophila melanogaster microtubul... 35 4.8
JC5153(JC5153)mitogen-activated protein kinase (EC 2.7.1.-) - ma... 33 5.8
(Q5HCM7) RecName: Full=Lipase 1; EC=3.1.1.3; AltName: F... 34 6.3
AY517555_1(AY517555|pid:none) Homo sapiens hypothetical rhabdomy... 34 6.3
BA000016_1884(BA000016|pid:none) Clostridium perfringens str. 13... 34 6.3
AE001362_157(AE001362|pid:none) Plasmodium falciparum 3D7 chromo... 34 6.3
AE014187_556(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 34 6.3
(Q54IE7) RecName: Full=Uncharacterized protein DDB_G0288805; 34 6.3
BA000033_2590(BA000033|pid:none) Staphylococcus aureus subsp. au... 34 6.3
AE017194_3767(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 34 6.3
AF064205_2(AF064205|pid:none) Homo sapiens dynactin 1 (DCTN1) ge... 34 6.3
AK301913_1(AK301913|pid:none) Homo sapiens cDNA FLJ58814 complet... 34 6.3
AL844504_46(AL844504|pid:none) Plasmodium falciparum 3D7 chromos... 34 6.3
FM992689_606(FM992689|pid:none) Candida dubliniensis CD36 chromo... 34 6.3
BC142240_1(BC142240|pid:none) Bos taurus multimerin 1, mRNA (cDN... 34 6.3
(A3M022) RecName: Full=Mediator of RNA polymerase II transcripti... 34 6.3
CT005269_71(CT005269|pid:none) Leishmania major strain Friedlin,... 34 6.3
AK294587_1(AK294587|pid:none) Homo sapiens cDNA FLJ60498 complet... 34 6.3
CR380957_106(CR380957|pid:none) Candida glabrata strain CBS138 c... 34 6.3
AK117758_1(AK117758|pid:none) Arabidopsis thaliana At4g37820 mRN... 34 6.3
AL844505_259(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 34 6.3
(P28023) RecName: Full=Dynactin subunit 1; AltName: Full=150 kDa... 34 6.3
M90693_1(M90693|pid:none) Staphylococcus aureus glycerol ester h... 34 6.3
(P11055) RecName: Full=Myosin-3; AltName: Full=Myosin heavy chai... 34 6.3
(O67526) RecName: Full=ATP synthase subunit b; AltName: Full=ATP... 34 6.3
CR940347_182(CR940347|pid:none) Theileria annulata strain Ankara... 34 6.3
AL844506_276(AL844506|pid:none) Plasmodium falciparum 3D7 chromo... 34 6.3
AM910990_191(AM910990|pid:none) Plasmodium knowlesi strain H chr... 34 6.3
AF270937_23(AF270937|pid:none) Plutella xylostella granulovirus ... 34 6.3
AL035477_11(AL035477|pid:none) Plasmodium falciparum MAL4P4. 34 6.3
E71606(E71606)hypothetical protein PFB0765w - malaria parasite (... 34 6.3
AE014298_1773(AE014298|pid:none) Drosophila melanogaster chromos... 34 6.3
CR857827_1(CR857827|pid:none) Pongo abelii mRNA; cDNA DKFZp459A1... 34 6.3
BC142509_1(BC142509|pid:none) Bos taurus dynactin 1 (p150, glued... 34 6.3
S16129(S16129)dynein-associated protein, 150K, cytosolic - bovine 34 6.3
BX538351_101(BX538351|pid:none) Cryptosporidium parvum chromosom... 34 6.3
AF202146_1(AF202146|pid:none) Homo sapiens p10-binding protein B... 34 6.3
X15696_1(X15696|pid:none) Human muscle mRNA for embryonic myosin... 34 6.3
AM910994_352(AM910994|pid:none) Plasmodium knowlesi strain H chr... 34 6.3
CP000724_2515(CP000724|pid:none) Alkaliphilus metalliredigens QY... 34 6.3
(P47460) RecName: Full=Cytadherence high molecular weight protei... 34 6.3
AM909652_13(AM909652|pid:none) Streptococcus equi subsp. equi in... 34 6.3
(O97237) RecName: Full=GRIP and coiled-coil domain-containing pr... 34 8.2
AE014185_353(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 34 8.2
CP000814_44(CP000814|pid:none) Campylobacter jejuni subsp. jejun... 34 8.2
CR857969_1(CR857969|pid:none) Pongo abelii mRNA; cDNA DKFZp468K1... 34 8.2
AF102575_1(AF102575|pid:none) Dictyostelium discoideum cell surf... 34 8.2
BC170308_1(BC170308|pid:none) Xenopus laevis homer 1b-1, mRNA (c... 34 8.2
EU912438_81(EU912438|pid:none) Vaucheria litorea chloroplast, co... 34 8.2
AL031745_16(AL031745|pid:none) Plasmodium falciparum DNA from MA... 34 8.2
CP000961_2823(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 34 8.2
AY224570_1(AY224570|pid:none) Oryza sativa (japonica cultivar-gr... 34 8.2
BX293980_451(BX293980|pid:none) Mycoplasma mycoides subsp. mycoi... 34 8.2
G89453(G89453)protein F35H12.2 [imported] - Caenorhabditis elegans 34 8.2
AB110205_1(AB110205|pid:none) Oryza sativa Japonica Group mRNA f... 34 8.2
DQ987498_1(DQ987498|pid:none) Gibberella zeae RING-12 protein mR... 34 8.2
CP001083_1995(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 34 8.2
BX908798_1764(BX908798|pid:none) Parachlamydia-related symbiont ... 34 8.2
AL844503_64(AL844503|pid:none) Plasmodium falciparum 3D7 chromos... 34 8.2
(Q4I7N9) RecName: Full=E3 ubiquitin-protein ligase BRE1; ... 34 8.2
BX537933_1(BX537933|pid:none) Homo sapiens mRNA; cDNA DKFZp686I0... 34 8.2
AE014187_469(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 34 8.2
CU928170_509(CU928170|pid:none) Kluyveromyces thermotolerans str... 34 8.2
DQ141215_1(DQ141215|pid:none) Danio rerio dynactin 1a mRNA, comp... 34 8.2
AL844505_244(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 34 8.2
AP007151_726(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 34 8.2
CP000776_1340(CP000776|pid:none) Campylobacter hominis ATCC BAA-... 34 8.2
JC5368(JC5368) dynactin 1 - mouse &U60312_1(U60312|pid:none) 34 8.2
AJ627213_5(AJ627213|pid:none) Gallus gallus primary C-C chemokin... 34 8.2
AL844507_240(AL844507|pid:none) Plasmodium falciparum 3D7 chromo... 34 8.2
CP000099_1544(CP000099|pid:none) Methanosarcina barkeri str. Fus... 34 8.2
CP000606_1802(CP000606|pid:none) Shewanella loihica PV-4, comple... 34 8.2
AE004969_110(AE004969|pid:none) Neisseria gonorrhoeae FA 1090, c... 34 8.2
AY355363_1(AY355363|pid:none) Rickettsia helvetica strain C9P9 s... 34 8.2
AK137029_1(AK137029|pid:none) Mus musculus 12 days embryo embryo... 34 8.2
BX538350_19(BX538350|pid:none) Cryptosporidium parvum chromosome... 34 8.2
AE006641_177(AE006641|pid:none) Sulfolobus solfataricus P2, comp... 34 8.2
AL844504_303(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 34 8.2
CU928175_510(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 34 8.2
AL844505_66(AL844505|pid:none) Plasmodium falciparum 3D7 chromos... 34 8.2
CP000015_58(CP000015|pid:none) Borrelia garinii PBi plasmid lp54... 34 8.2
AY859476_1(AY859476|pid:none) Xenopus laevis homer 1b-1 mRNA, co... 34 8.2
AB220161_1(AB220161|pid:none) Tetrahymena thermophila BNI2 mRNA ... 34 8.2
FN357719_21(FN357719|pid:none) Schistosoma mansoni genome sequen... 34 8.2
CP001287_3415(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 34 8.2
AE014188_70(AE014188|pid:none) Plasmodium falciparum 3D7 chromos... 34 8.2
AM422018_203(AM422018|pid:none) Candidatus Phytoplasma australie... 34 8.2
AE014186_314(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 34 8.2
AE014186_87(AE014186|pid:none) Plasmodium falciparum 3D7 chromos... 34 8.2
CP000713_1930(CP000713|pid:none) Psychrobacter sp. PRwf-1, compl... 34 8.2
(O74424) RecName: Full=Nucleoporin nup211; AltName: Full=Nuclear... 34 8.2
AL034558_26(AL034558|pid:none) Plasmodium falciparum MAL3P2, com... 34 8.2
AM494969_76(AM494969|pid:none) Leishmania braziliensis chromosom... 34 8.2
AE014188_497(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 34 8.2
CP001020_813(CP001020|pid:none) Coxiella burnetii CbuK_Q154, com... 34 8.2
AM422018_798(AM422018|pid:none) Candidatus Phytoplasma australie... 34 8.2
(B5RRN9) RecName: Full=Chromosomal replication initiator protein... 34 8.2
AX601919_1(AX601919|pid:none) Sequence 11 from Patent WO02092628. 34 8.2
AF251290_1(AF251290|pid:none) Plasmodium falciparum glutamic aci... 34 8.2
AF490392_1(AF490392|pid:none) Mus musculus translocated promoter... 34 8.2
U41540_6(U41540|pid:none) Caenorhabditis elegans cosmid F35H12, ... 34 8.2
AE014188_343(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 34 8.2
AL844509_289(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 34 8.2
>CR382139_551(CR382139|pid:none) Debaryomyces hansenii strain CBS767
chromosome G complete sequence.
Length = 1016
Score = 46.2 bits (108), Expect = 0.002
Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Frame = +2
Query: 326 QETELENAYKKIKELEEQNKLKDQIIKDQELTLLLLTNSNDYSDKLTIKQTNNRLRKIQQ 505
+E+ +E+ +++E++ NKLK +++D E T LL SN+ S ++ N L+K +
Sbjct: 646 KESIIEDLEARVREVDRNNKLKF-LVEDDEKTELLKAKSNNESKMRLLQLENENLQKEFE 704
Query: 506 QNI-----EIESLKEKREEDLYNN 562
I ++E L +++EED+YNN
Sbjct: 705 TQINFYKNKLEILLQRQEEDIYNN 728
Score = 34.7 bits (78), Expect = 4.8
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Frame = +2
Query: 236 KQQKKAVLSQPTPTNINIVNSAPRSFSVYTQETELENA-YKKIKELEEQNKLKDQIIKDQ 412
+ Q KA+L Q T N + Y E+E+E+ K+ + E+ NKL+ +I + Q
Sbjct: 410 RSQIKALLDQRTSNKDN-------DYKFY--ESEIESLKLKETRVSEQNNKLRIEISELQ 460
Query: 413 ELTLLLLTNSNDYSDKLTIKQTNNRLRKIQQQNIEIESLKEKREEDLYNNEKSDILDK 586
+ + TNSN + + RL+K+Q+Q E++ ++ Y + +IL+K
Sbjct: 461 DQLYQINTNSNSH---------DQRLKKLQEQKNELQ------DKLTYYENEYEILEK 503
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 734,405,888
Number of extensions: 10416179
Number of successful extensions: 49472
Number of sequences better than 10.0: 325
Number of HSP's gapped: 48895
Number of HSP's successfully gapped: 341
Length of query: 314
Length of database: 1,040,966,779
Length adjustment: 128
Effective length of query: 186
Effective length of database: 630,818,299
Effective search space: 117332203614
Effective search space used: 117332203614
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
1 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |