| Contig-U09490-1 |
| Contig ID |
Contig-U09490-1 |
| Contig update |
2002. 9.13 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1195 |
| Chromosome number (1..6, M) |
4 |
| Chromosome length |
5430582 |
| Start point |
451672 |
| End point |
450515 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
3 |
| Number of EST |
5 |
| Link to clone list |
U09490 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.16 |
| Homology vs DNA |
Query= Contig-U09490-1 (Contig-U09490-1Q) /CSM_Contig/Contig-U09490-1Q.Seq.d
(1205 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ435432) Dictyostelium discoideum cDNA clone:ddv27i03, 3' ... 1350 0.0 1
(AU074508) Dictyostelium discoideum slug cDNA, clone SSL158. 476 e-129 1
(AU038703) Dictyostelium discoideum slug cDNA, clone SSL367. 367 7e-97 1
(BJ416729) Dictyostelium discoideum cDNA clone:ddv27i03, 5' ... 325 4e-86 2
(AU074609) Dictyostelium discoideum slug cDNA, clone SSL367. 240 1e-58 1
(C94523) Dictyostelium discoideum slug cDNA, clone SSL158. 182 2e-41 1
(AM476482) Vitis vinifera contig VV78X091179.12, whole genom... 38 0.051 5
(AI483681) EST249552 tomato ovary, TAMU Solanum lycopersicum... 38 0.13 2
(EK795547) 1093017175597 Global-Ocean-Sampling_GS-33-01-01-1... 50 0.20 1
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 38 0.48 18
(CC872827) NDL.26P12.T7 Notre Dame Liverpool Aedes aegypti g... 44 0.53 2
(BZ063970) llf27b08.b1 B.oleracea002 Brassica oleracea genom... 34 0.56 2
(EH216562) USDA-FP_179363 WHMH (pink hibiscus mealybug) Maco... 44 0.76 2
(BX284651) Mouse DNA sequence from clone RP23-308C21 on chro... 48 0.78 1
(AC147982) Mus musculus chromosome 17 clone RP24-364M10 map ... 48 0.78 1
(CC864531) NDL.96I1.T7 Notre Dame Liverpool Aedes aegypti ge... 44 0.78 2
(CJ487170) Macaca fascicularis mRNA, clone: QtsA-14827, 5' e... 40 0.81 2
(AC149209) Medicago truncatula chromosome 2 BAC clone mth2-3... 36 0.84 6
(DU091342) 100467 Tomato HindIII BAC Library Solanum lycoper... 38 0.84 2
(DU885245) 400557 Tomato HindIII BAC Library Solanum lycoper... 38 0.92 2
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 36 1.2 14
(CU234113) M.truncatula DNA sequence from clone MTH2-16M17 o... 36 1.5 5
(AC145453) Cicer arietinum strain ICC4958 clone cp1-18f4, WO... 36 1.7 2
(AP002497) Homo sapiens genomic DNA, chromosome 11q clone:CT... 40 2.0 6
(AC102573) Mus musculus chromosome 1, clone RP23-237L7, comp... 42 2.2 2
(EJ669761) 1092955054167 Global-Ocean-Sampling_GS-30-02-01-1... 38 2.4 2
(AQ008227) CpG0456A CpIOWAgDNA1 Cryptosporidium parvum genom... 40 2.4 2
(AJ862958) Vitis vinifera EST, clone RP01H09. 42 2.6 2
(AM449750) Vitis vinifera, whole genome shotgun sequence, co... 38 2.7 5
(BX538353) Cryptosporidium parvum chromosome 6, complete seq... 40 2.8 8
(CU468280) M.truncatula DNA sequence from clone MTH2-97H11 o... 32 2.9 8
(AC191877) Pan troglodytes BAC clone CH251-9N1 from chromoso... 46 3.1 1
(AM477349) Vitis vinifera contig VV78X004616.7, whole genome... 46 3.1 1
(AL023804) Human DNA sequence from clone RP4-633O20 on chrom... 46 3.1 1
(AC219616) Bos taurus clone CH240-327I8, WORKING DRAFT SEQUE... 46 3.1 1
(AC199152) Zea mays chromosome 7 clone ZMMBBb-135P15; ZMMBBb... 46 3.1 1
(AC173508) Bos taurus clone CH240-266L9, WORKING DRAFT SEQUE... 46 3.1 1
(ET056509) MUGQ_CH252P349C24Sp6_CP653_094 CHORI-252 Vervet M... 46 3.1 1
(ER509797) 1093015436573 Global-Ocean-Sampling_GS-35-01-01-1... 46 3.1 1
(EK212781) 1095460104715 Global-Ocean-Sampling_GS-31-01-01-1... 46 3.1 1
(EJ684721) 1092955165678 Global-Ocean-Sampling_GS-30-02-01-1... 46 3.1 1
(EJ372858) 1092963729939 Global-Ocean-Sampling_GS-28-01-01-1... 46 3.1 1
(EJ325363) 1092405886139 Global-Ocean-Sampling_GS-28-01-01-1... 46 3.1 1
(CC119815) NDL.71I23.T7 Notre Dame Liverpool Aedes aegypti g... 46 3.1 1
(FF658775) G826P5289FB11.T0 Acorn worm normalized juvenile p... 46 3.1 1
(FF640787) G826P510FE7.T0 Acorn worm normalized juvenile pEx... 46 3.1 1
(FF628066) G825P534FF10.T0 Acorn worm normalized gastrula pE... 46 3.1 1
(FF517409) G710P5205FF3.T0 Acorn worm normalized juvenile pE... 46 3.1 1
(CP000679) Caldicellulosiruptor saccharolyticus DSM 8903, co... 46 3.1 1
(AF005383) Caldicellulosiruptor saccharolyticus putative tra... 46 3.1 1
(FG708750) G1144P312FM12.T0 Anolis carolinensis pooled norma... 44 3.3 2
(EJ164841) 1092344061734 Global-Ocean-Sampling_GS-27-01-01-1... 38 3.6 2
(J03902) Plasmodium falciparum p101/acidic basic repeat anti... 40 4.4 2
(AC147877) Medicago truncatula clone mth2-9b13, complete seq... 36 5.2 6
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi... 36 5.2 2
(AC189381) Brassica rapa subsp. pekinensis clone KBrB051E13,... 36 6.0 9
(CZ520789) GMW2-66O21a.g2 GMW2 Glycine max genomic, genomic ... 32 7.6 3
(CX337355) JGI_XZT19952.rev NIH_XGC_tropTad5 Xenopus (Silura... 34 7.8 2
(ET098163) QM0AAB12BF11FM1 CCER1 Citrus clementina genomic c... 32 7.8 2
(EC821865) SME00004544 esmbsro2 Sawyeria marylandensis cDNA,... 42 8.0 2
(EC821485) SME00004090 esmbsro2 Sawyeria marylandensis cDNA,... 42 8.1 2
(EC823230) SME00005697 esmbsro2 Sawyeria marylandensis cDNA,... 42 8.2 2
(CP000312) Clostridium perfringens SM101, complete genome. 34 8.4 22
(AL358796) Human DNA sequence from clone RP13-260P4 on chrom... 40 8.5 3
(EC826007) SME00002222 esmbsro2 Sawyeria marylandensis cDNA,... 42 8.7 2
(EG353587) SAAH-aaa69a07.g1 Agen 0058 Schmidtea mediterranea... 42 8.8 2
(EC825014) SME00009638 esmbsro2 Sawyeria marylandensis cDNA,... 42 9.1 2
(AC158453) Dasypus novemcinctus clone VMRC5-127H3, WORKING D... 40 9.1 5
(AC004153) Plasmodium falciparum chromosome 12 clone 3D7, **... 40 9.9 8
(EE670750) SAAH-aac51a04.g1 Agen 0058 Schmidtea mediterranea... 42 9.9 2
>(BJ435432) Dictyostelium discoideum cDNA clone:ddv27i03, 3' end,
single read.
Length = 737
Score = 1350 bits (681), Expect = 0.0
Identities = 686/688 (99%)
Strand = Plus / Minus
Query: 396 caattttaacttcatcatttttaaattcaaataaaactcattcaaaattaaattttgtaa 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 caattttaacttcatcatttttaaattcaaataaaactcattcaaaattaaattttgtaa 678
Query: 456 atgatgtaattgttggaaatgatgatatgatttattttacagatagtacaagtattgcgc 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 atgatgtaattgttggaaatgatgatatgatttattttacagatagtacaagtattgcgc 618
Query: 516 caattttagataatactggtgattggaatactttaataccatcaatgtatacattagtta 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 caattttagataatactggtgattggaatactttaataccatcaatgtatacattagtta 558
Query: 576 ccactgttagtcatggtaaattattatcttataatccaaatacaaaggaaactaaagttt 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ccactgttagtcatggtaaattattatcttataatccaaatacaaaggaaactaaagttt 498
Query: 636 taatggatggttttaaatattcaaatggtgttgcatttgatccaaaagaagagagtattt 695
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 497 taatggatggttttaaatattcaaatggtgttgcatttgatccaaaagaanagagtattt 438
Query: 696 tcattggtgaaaccactggatgtaaagtttttagatactggatcaaaggtgcaaataaag 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tcattggtgaaaccactggatgtaaagtttttagatactggatcaaaggtgcaaataaag 378
Query: 756 gtaaatctgaagttttcattgataatttaccaggctatccagatggtgttgatgttgatt 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gtaaatctgaagttttcattgataatttaccaggctatccagatggtgttgatgttgatt 318
Query: 816 tcaaagaaggaaaactttatattagtatatttggtggtagaaattggtttatagatttaa 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tcaaagaaggaaaactttatattagtatatttggtggtagaaattggtttatagatttaa 258
Query: 876 ttcatccatatccaatactcaaaaatattttcttgagaataccatatttaaaaatgagac 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ttcatccatatccaatactcaaaaatattttcttgagaataccatatttaaaaatgagac 198
Query: 936 ctcaaaaaccttcaatagtagttgctgatactcaaactggtaaaatcttaaattatttcc 995
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 197 ctcaaaaaccttcaatagtagttgctgacactcaaactggtaaaatcttaaattatttcc 138
Query: 996 aaacctctaatgattttccaacaattacaagcacaattgaacataatggtaaaattttaa 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 aaacctctaatgattttccaacaattacaagcacaattgaacataatggtaaaattttaa 78
Query: 1056 ttggtaatcttttaagtgacttttttac 1083
||||||||||||||||||||||||||||
Sbjct: 77 ttggtaatcttttaagtgacttttttac 50
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,292,515,549
Number of extensions: 82015627
Number of successful extensions: 6844575
Number of sequences better than 10.0: 72
Length of query: 1205
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1181
Effective length of database: 97,308,875,965
Effective search space: 114921782514665
Effective search space used: 114921782514665
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.26 |
| Homology vs Protein |
Query= Contig-U09490-1 (Contig-U09490-1Q) /CSM_Contig/Contig-U09490-1Q.Seq.d
(1205 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CP000514_501(CP000514|pid:none) Marinobacter aquaeolei VT8, comp... 130 1e-28
AY714847_40(AY714847|pid:none) Uncultured archaeon GZfos27E7 clo... 120 1e-25
BC090086_1(BC090086|pid:none) Xenopus tropicalis hypothetical LO... 116 1e-24
CP000388_3402(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 114 5e-24
CP000777_2493(CP000777|pid:none) Leptospira biflexa serovar Pato... 114 7e-24
CP001322_4293(CP001322|pid:none) Desulfatibacillum alkenivorans ... 113 2e-23
CP000438_3797(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 108 4e-22
EF677213_1(EF677213|pid:none) Picea sitchensis clone WS02763_K16... 107 6e-22
AE004091_1295(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 107 8e-22
FM209186_3889(FM209186|pid:none) Pseudomonas aeruginosa LESB58 c... 107 8e-22
AP011115_647(AP011115|pid:none) Rhodococcus opacus B4 DNA, compl... 106 1e-21
CP000431_908(CP000431|pid:none) Rhodococcus jostii RHA1, complet... 105 3e-21
CP000744_4056(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 105 4e-21
CP000680_1761(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 103 1e-20
AM181176_3911(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 100 8e-20
CP000076_3640(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 100 2e-19
BA000012_1348(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 98 5e-19
BA000040_7869(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 97 9e-19
AM464697_2(AM464697|pid:none) Vitis vinifera contig VV78X098631.... 95 4e-18
AF419594_1(AF419594|pid:none) Arabidopsis thaliana At1g08470/T27... 94 1e-17
CP000031_2957(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple... 91 1e-16
(Q3T0E5) RecName: Full=Adipocyte plasma membrane-associated prot... 90 1e-16
AP009153_3410(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 90 1e-16
BC067549_1(BC067549|pid:none) Danio rerio bscv (C20orf3) homolog... 90 1e-16
BT042476_1(BT042476|pid:none) Zea mays full-length cDNA clone ZM... 90 2e-16
BC163230_1(BC163230|pid:none) Danio rerio zgc:194209, mRNA (cDNA... 89 2e-16
CP000826_4838(CP000826|pid:none) Serratia proteamaculans 568, co... 87 1e-15
AY325201_1(AY325201|pid:none) Rattus norvegicus Ab2-305 mRNA, co... 87 2e-15
AC135206_16(AC135206|pid:none) Oryza sativa (japonica cultivar-g... 87 2e-15
(Q7TP48) RecName: Full=Adipocyte plasma membrane-associated prot... 86 2e-15
EF085554_1(EF085554|pid:none) Picea sitchensis clone WS0277_M04 ... 86 2e-15
AC051633_19(AC051633|pid:none) Oryza sativa chromosome 10 BAC OS... 86 3e-15
CP000094_3126(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 86 3e-15
AM851014_1(AM851014|pid:none) Nicotiana tabacum mRNA for stricto... 85 6e-15
AY458643_43(AY458643|pid:none) Uncultured marine bacterium 561 c... 85 6e-15
AK221697_1(AK221697|pid:none) Arabidopsis thaliana mRNA for puta... 85 6e-15
(Q9HDC9) RecName: Full=Adipocyte plasma membrane-associated prot... 84 8e-15
AK025834_1(AK025834|pid:none) Homo sapiens cDNA: FLJ22181 fis, c... 84 8e-15
AM488281_1(AM488281|pid:none) Vitis vinifera contig VV78X163218.... 84 8e-15
AB033767_1(AB033767|pid:none) Homo sapiens BSCv mRNA, partial cds. 84 8e-15
BT083777_1(BT083777|pid:none) Zea mays full-length cDNA clone ZM... 84 1e-14
FB746667_1(FB746667|pid:none) Sequence 134 from Patent EP1903111. 83 2e-14
BT023417_1(BT023417|pid:none) Arabidopsis thaliana At3g57030 gen... 83 2e-14
AM481947_1(AM481947|pid:none) Vitis vinifera contig VV78X007222.... 83 2e-14
EU968924_1(EU968924|pid:none) Zea mays clone 324997 strictosidin... 82 5e-14
CP000494_4547(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 80 1e-13
EU966347_1(EU966347|pid:none) Zea mays clone 293813 strictosidin... 79 2e-13
AP008217_210(AP008217|pid:none) Oryza sativa (japonica cultivar-... 79 4e-13
AY352241_1(AY352241|pid:none) Drosophila yakuba Hmu gene, partia... 78 5e-13
AF261141_1(AF261141|pid:none) Lycopersicon esculentum putative s... 78 7e-13
JC7260(JC7260)strictosidine synthase (EC 4.3.3.2) homolog 2 - fr... 77 1e-12
AY352233_1(AY352233|pid:none) Drosophila yakuba CG11833 gene, pa... 76 2e-12
AY864356_1(AY864356|pid:none) Drosophila melanogaster strain Mel... 76 3e-12
AK064775_1(AK064775|pid:none) Oryza sativa Japonica Group cDNA c... 76 3e-12
AY864361_1(AY864361|pid:none) Drosophila melanogaster strain Mel... 76 3e-12
AY864357_1(AY864357|pid:none) Drosophila melanogaster strain Mel... 76 3e-12
AE014297_4287(AE014297|pid:none) Drosophila melanogaster chromos... 76 3e-12
AY864359_1(AY864359|pid:none) Drosophila melanogaster strain Mel... 76 3e-12
AY864355_1(AY864355|pid:none) Drosophila melanogaster strain Mel... 76 3e-12
AY118372_1(AY118372|pid:none) Drosophila melanogaster RE16762 fu... 76 3e-12
AY864492_1(AY864492|pid:none) Drosophila simulans strain TX-2 he... 75 4e-12
AY864490_1(AY864490|pid:none) Drosophila simulans strain CA2-8 h... 75 4e-12
AY864497_1(AY864497|pid:none) Drosophila simulans strain TX-7 he... 75 4e-12
AY864513_1(AY864513|pid:none) Drosophila simulans strain ZIM-12 ... 75 4e-12
AY349745_1(AY349745|pid:none) Drosophila simulans strain Sim1 Hm... 75 4e-12
AP004680_7(AP004680|pid:none) Oryza sativa Japonica Group genomi... 75 4e-12
AY864508_1(AY864508|pid:none) Drosophila simulans strain ZIM-7 h... 75 4e-12
AY864500_1(AY864500|pid:none) Drosophila simulans strain TX-10 h... 75 4e-12
AC092556_23(AC092556|pid:none) Oryza sativa chromosome 3 BAC OSJ... 75 4e-12
AY864484_1(AY864484|pid:none) Drosophila simulans strain CA2-2 h... 75 5e-12
AY349750_1(AY349750|pid:none) Drosophila simulans strain Sim6 Hm... 75 5e-12
AP003882_2(AP003882|pid:none) Oryza sativa Japonica Group genomi... 75 5e-12
AY864505_1(AY864505|pid:none) Drosophila simulans strain ZIM-4 h... 75 5e-12
AY864494_1(AY864494|pid:none) Drosophila simulans strain TX-4 he... 75 5e-12
AY864510_1(AY864510|pid:none) Drosophila simulans strain ZIM-9 h... 75 5e-12
AY864511_1(AY864511|pid:none) Drosophila simulans strain ZIM-10 ... 75 5e-12
AY864512_1(AY864512|pid:none) Drosophila simulans strain ZIM-11 ... 75 5e-12
AY864495_1(AY864495|pid:none) Drosophila simulans strain TX-5 he... 75 5e-12
AY864501_1(AY864501|pid:none) Drosophila simulans strain TX-11 h... 75 6e-12
AC148763_28(AC148763|pid:none) Medicago truncatula clone mth2-29... 74 8e-12
AP008215_486(AP008215|pid:none) Oryza sativa (japonica cultivar-... 74 8e-12
AC124957_3(AC124957|pid:none) Medicago truncatula clone mth2-15k... 74 1e-11
AC150799_22(AC150799|pid:none) Medicago truncatula chromosome 2 ... 74 1e-11
AP004680_5(AP004680|pid:none) Oryza sativa Japonica Group genomi... 74 1e-11
AY349686_1(AY349686|pid:none) Drosophila simulans strain Sim3 CG... 73 2e-11
AK073494_1(AK073494|pid:none) Oryza sativa Japonica Group cDNA c... 73 2e-11
AY349687_1(AY349687|pid:none) Drosophila simulans strain Sim4 CG... 73 2e-11
AE014297_4472(AE014297|pid:none) Drosophila melanogaster chromos... 73 2e-11
CP000656_4833(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 73 2e-11
AY349688_1(AY349688|pid:none) Drosophila simulans strain Sim5 CG... 73 2e-11
AY349691_1(AY349691|pid:none) Drosophila simulans strain Sim8 CG... 73 2e-11
AK109686_1(AK109686|pid:none) Oryza sativa Japonica Group cDNA c... 73 2e-11
AP004680_4(AP004680|pid:none) Oryza sativa Japonica Group genomi... 72 3e-11
AY349748_1(AY349748|pid:none) Drosophila simulans strain Sim4 Hm... 72 4e-11
CP000384_1207(CP000384|pid:none) Mycobacterium sp. MCS, complete... 72 5e-11
AP003838_1(AP003838|pid:none) Oryza sativa Japonica Group genomi... 70 2e-10
BA000045_2811(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 69 3e-10
CP000580_1233(CP000580|pid:none) Mycobacterium sp. JLS, complete... 69 3e-10
AL133452_6(AL133452|pid:none) Arabidopsis thaliana DNA chromosom... 69 3e-10
AP003838_6(AP003838|pid:none) Oryza sativa Japonica Group genomi... 68 6e-10
EU968200_1(EU968200|pid:none) Zea mays clone 316544 strictosidin... 67 1e-09
CP000511_1547(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 67 2e-09
AK175245_1(AK175245|pid:none) Arabidopsis thaliana mRNA for muci... 66 2e-09
AL138655_10(AL138655|pid:none) Arabidopsis thaliana DNA chromoso... 63 2e-08
AF076979_3(AF076979|pid:none) Arabidopsis thaliana late-embryoge... 62 3e-08
A84840(A84840) probable strictosidine synthase [imported] - Arab... 62 3e-08
FN357537_9(FN357537|pid:none) Schistosoma mansoni genome sequenc... 62 4e-08
CP000449_1667(CP000449|pid:none) Maricaulis maris MCS10, complet... 62 4e-08
AL138655_9(AL138655|pid:none) Arabidopsis thaliana DNA chromosom... 58 8e-07
AP005867_20(AP005867|pid:none) Oryza sativa Japonica Group genom... 57 1e-06
(P92976) RecName: Full=Strictosidine synthase 3; Short=... 57 1e-06
AE016823_3271(AE016823|pid:none) Leptospira interrogans serovar ... 57 2e-06
AY813347_1(AY813347|pid:none) Schistosoma japonicum SJCHGC09501 ... 56 2e-06
AE010300_4212(AE010300|pid:none) Leptospira interrogans serovar ... 56 2e-06
(P94111) RecName: Full=Strictosidine synthase 1; Short=... 55 4e-06
AK301959_1(AK301959|pid:none) Homo sapiens cDNA FLJ58338 complet... 55 6e-06
T22841(T22841) hypothetical protein F57C2.5 - Caenorhabditis ele... 55 6e-06
FN317796_1(FN317796|pid:none) Schistosoma japonicum isolate Anhu... 55 6e-06
AM450736_3(AM450736|pid:none) Vitis vinifera contig VV78X153972.... 54 8e-06
AM453615_2(AM453615|pid:none) Vitis vinifera contig VV78X084497.... 53 2e-05
BA000040_2817(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 52 5e-05
CP001029_1038(CP001029|pid:none) Methylobacterium populi BJ001, ... 50 1e-04
AM427134_2(AM427134|pid:none) Vitis vinifera contig VV78X264233.... 50 1e-04
AM270216_35(AM270216|pid:none) Aspergillus niger contig An10c005... 50 2e-04
(P68175) RecName: Full=Strictosidine synthase; EC=4.3.3... 50 2e-04
(P68174) RecName: Full=Strictosidine synthase; EC=4.3.3... 50 2e-04
CP000804_2780(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 49 3e-04
AC016662_12(AC016662|pid:none) Arabidopsis thaliana chromosome 1... 49 3e-04
EU288197_1(EU288197|pid:none) Mitragyna speciosa strictosidine s... 47 0.001
AM260479_2935(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 47 0.001
AP007164_430(AP007164|pid:none) Aspergillus oryzae RIB40 genomic... 47 0.001
CP000032_239(CP000032|pid:none) Ruegeria pomeroyi DSS-3 plasmid ... 47 0.001
AC162031_7(AC162031|pid:none) Medicago truncatula clone mth2-194... 47 0.001
CP000494_2656(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 47 0.002
(P18417) RecName: Full=Strictosidine synthase; EC=4.3.3... 47 0.002
X53602_1(X53602|pid:none) C.roseus mRNA for strictosidine syntha... 47 0.002
AY499191_1(AY499191|pid:none) Synthetic construct paraoxonase PO... 47 0.002
CP001399_2551(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 46 0.002
EU408348_3(EU408348|pid:none) Uncultured bacterium BLR3 genomic ... 46 0.002
CP000136_140(CP000136|pid:none) Rhizobium etli CFN 42 plasmid p4... 46 0.002
EU670747_1(EU670747|pid:none) Ophiorrhiza japonica strictosidine... 46 0.003
AM453615_1(AM453615|pid:none) Vitis vinifera contig VV78X084497.... 46 0.003
CP000271_2372(CP000271|pid:none) Burkholderia xenovorans LB400 c... 46 0.003
CP000740_259(CP000740|pid:none) Sinorhizobium medicae WSM419 pla... 45 0.004
CP000667_650(CP000667|pid:none) Salinispora tropica CNB-440, com... 45 0.005
CP001402_2551(CP001402|pid:none) Sulfolobus islandicus M.16.4, c... 45 0.007
CU234118_2336(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 45 0.007
CP001037_5545(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 45 0.007
BX571966_35(BX571966|pid:none) Burkholderia pseudomallei strain ... 45 0.007
AC148763_10(AC148763|pid:none) Medicago truncatula clone mth2-29... 45 0.007
AP011115_3133(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 45 0.007
CP000125_1540(CP000125|pid:none) Burkholderia pseudomallei 1710b... 44 0.009
AP006725_4840(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 44 0.011
CP000479_4946(CP000479|pid:none) Mycobacterium avium 104, comple... 44 0.011
CP000647_3943(CP000647|pid:none) Klebsiella pneumoniae subsp. pn... 44 0.011
CP001053_280(CP001053|pid:none) Burkholderia phytofirmans PsJN c... 44 0.011
AE006641_2467(AE006641|pid:none) Sulfolobus solfataricus P2, com... 44 0.015
(P27170) RecName: Full=Serum paraoxonase/arylesterase 1; ... 43 0.019
CP000494_6096(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 43 0.019
CP000964_111(CP000964|pid:none) Klebsiella pneumoniae 342, compl... 43 0.019
CP001192_135(CP001192|pid:none) Rhizobium leguminosarum bv. trif... 43 0.019
AE016958_3581(AE016958|pid:none) Mycobacterium avium subsp. para... 43 0.019
AF220942_1(AF220942|pid:none) Oryctolagus cuniculus paraoxonase ... 43 0.019
CP000697_2558(CP000697|pid:none) Acidiphilium cryptum JF-5, comp... 43 0.025
AY499189_1(AY499189|pid:none) Synthetic construct paraoxonase PO... 43 0.025
U32684_1(U32684|pid:none) Mus musculus serum paraoxonase (Pon) m... 42 0.033
FP236842_3562(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/9... 42 0.033
AY499193_1(AY499193|pid:none) Synthetic construct paraoxonase PO... 42 0.043
AY499192_1(AY499192|pid:none) Synthetic construct paraoxonase PO... 42 0.043
CP000699_2289(CP000699|pid:none) Sphingomonas wittichii RW1, com... 42 0.043
CP000473_1914(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 42 0.056
CP000474_540(CP000474|pid:none) Arthrobacter aurescens TC1, comp... 42 0.056
AE007870_999(AE007870|pid:none) Agrobacterium tumefaciens str. C... 42 0.056
AB300377_5(AB300377|pid:none) Uncultured bacterium genomic DNA, ... 42 0.056
EF473651_1(EF473651|pid:none) Sus scrofa paraoxonase 1 (PON1) mR... 42 0.056
(P52430) RecName: Full=Serum paraoxonase/arylesterase 1; ... 42 0.056
AE008281_6(AE008281|pid:none) Agrobacterium tumefaciens str. C58... 42 0.056
CP000360_646(CP000360|pid:none) Acidobacteria bacterium Ellin345... 42 0.056
CP000384_2005(CP000384|pid:none) Mycobacterium sp. MCS, complete... 42 0.056
CP000409_965(CP000409|pid:none) Rickettsia canadensis str. McKie... 41 0.074
U94856_1(U94856|pid:none) Rattus norvegicus paraoxonase mRNA, pa... 41 0.074
(P55159) RecName: Full=Serum paraoxonase/arylesterase 1; ... 41 0.074
BC091403_1(BC091403|pid:none) Rattus norvegicus paraoxonase 1, m... 41 0.074
CP000874_2193(CP000874|pid:none) Rhizobium sp. NGR234 plasmid pN... 41 0.096
CP000656_4083(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 41 0.096
CP000959_1663(CP000959|pid:none) Burkholderia cenocepacia MC0-3 ... 41 0.096
AM236084_388(AM236084|pid:none) Rhizobium leguminosarum bv. vici... 41 0.096
AP007165_2(AP007165|pid:none) Aspergillus oryzae RIB40 genomic D... 41 0.096
CP001074_3927(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 40 0.13
CP000542_1497(CP000542|pid:none) Verminephrobacter eiseniae EF01... 40 0.13
AE008923_4191(AE008923|pid:none) Xanthomonas axonopodis pv. citr... 40 0.13
AM236086_286(AM236086|pid:none) Rhizobium leguminosarum bv. vici... 40 0.16
CU633897_91(CU633897|pid:none) Podospora anserina genomic DNA ch... 40 0.16
CP001401_2223(CP001401|pid:none) Sulfolobus islandicus M.16.27, ... 40 0.21
CP001298_575(CP001298|pid:none) Methylobacterium chloromethanicu... 40 0.21
CP000511_2200(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 40 0.21
CP000272_1282(CP000272|pid:none) Burkholderia xenovorans LB400 c... 40 0.21
AM270106_4(AM270106|pid:none) Aspergillus niger contig An05c0060... 39 0.28
CP000580_4741(CP000580|pid:none) Mycobacterium sp. JLS, complete... 39 0.28
CP000494_4522(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 39 0.28
CP000384_4390(CP000384|pid:none) Mycobacterium sp. MCS, complete... 39 0.28
L48513_1(L48513|pid:none) Homo sapiens paraoxonase 2 (PON2) mRNA... 39 0.37
CP000849_1394(CP000849|pid:none) Rickettsia bellii OSU 85-389, c... 39 0.37
CP000908_597(CP000908|pid:none) Methylobacterium extorquens PA1,... 39 0.37
CP000087_81(CP000087|pid:none) Rickettsia bellii RML369-C, compl... 39 0.37
CP000697_2553(CP000697|pid:none) Acidiphilium cryptum JF-5, comp... 39 0.37
AK301772_1(AK301772|pid:none) Homo sapiens cDNA FLJ57644 complet... 39 0.48
AC004022_2(AC004022|pid:none) Homo sapiens BAC clone GS1-155M11 ... 39 0.48
AK296636_1(AK296636|pid:none) Homo sapiens cDNA FLJ54305 complet... 39 0.48
(P27169) RecName: Full=Serum paraoxonase/arylesterase 1; ... 39 0.48
AK296029_1(AK296029|pid:none) Homo sapiens cDNA FLJ55376 complet... 39 0.48
AM236080_4242(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 39 0.48
AK315209_1(AK315209|pid:none) Homo sapiens cDNA, FLJ96200, highl... 39 0.48
CP000138_485(CP000138|pid:none) Rhizobium etli CFN 42 plasmid p4... 39 0.48
AM039952_4353(AM039952|pid:none) Xanthomonas campestris pv. vesi... 38 0.62
CP000826_3483(CP000826|pid:none) Serratia proteamaculans 568, co... 38 0.62
AY499198_1(AY499198|pid:none) Synthetic construct paraoxonase PO... 38 0.62
AM434419_4(AM434419|pid:none) Vitis vinifera contig VV78X045774.... 38 0.62
(Q15165) RecName: Full=Serum paraoxonase/arylesterase 2; ... 38 0.62
BA000023_2726(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 38 0.81
M63014_1(M63014|pid:none) H.sapiens serum paraoxonase (PON) mRNA... 38 0.81
AF001601_1(AF001601|pid:none) Homo sapiens paraoxonase (PON2) mR... 38 0.81
CP000113_3163(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 38 0.81
AM849034_938(AM849034|pid:none) Clavibacter michiganensis subsp.... 38 0.81
AE014613_2449(AE014613|pid:none) Salmonella enterica subsp. ente... 38 0.81
CP000746_1823(CP000746|pid:none) Actinobacillus succinogenes 130... 38 0.81
EU579457_1(EU579457|pid:none) Ovis aries celiac disease 2 mRNA, ... 38 0.81
CP000053_1251(CP000053|pid:none) Rickettsia felis URRWXCal2, com... 37 1.1
CP001227_596(CP001227|pid:none) Rickettsia peacockii str. Rustic... 37 1.1
CP000848_1188(CP000848|pid:none) Rickettsia rickettsii str. 'She... 37 1.1
AE008922_4057(AE008922|pid:none) Xanthomonas campestris pv. camp... 37 1.1
CP000269_269(CP000269|pid:none) Janthinobacterium sp. Marseille,... 37 1.4
AM920689_4362(AM920689|pid:none) Xanthomonas campestris pv. camp... 37 1.4
CP001189_392(CP001189|pid:none) Gluconacetobacter diazotrophicus... 37 1.4
AJ292086_1(AJ292086|pid:none) Platichthys flesus partial mRNA fo... 37 1.4
AM238664_575(AM238664|pid:none) Streptomyces ambofaciens ATCC 23... 37 1.8
AY499194_1(AY499194|pid:none) Synthetic construct paraoxonase PO... 37 1.8
CP001176_4885(CP001176|pid:none) Bacillus cereus B4264, complete... 37 1.8
CP001001_5359(CP001001|pid:none) Methylobacterium radiotolerans ... 37 1.8
Y11779_1(Y11779|pid:none) R.prowazekii ygjT-like gene and 4 open... 36 2.4
AM260480_339(AM260480|pid:none) Ralstonia eutropha H16 chromosom... 36 2.4
CP000362_3458(CP000362|pid:none) Roseobacter denitrificans OCh 1... 36 2.4
AM920431_1205(AM920431|pid:none) Penicillium chrysogenum Wiscons... 36 2.4
CP000847_1113(CP000847|pid:none) Rickettsia akari str. Hartford,... 36 2.4
(Q58DS7) RecName: Full=Serum paraoxonase/arylesterase 2; ... 36 2.4
EU442571_1(EU442571|pid:none) Sus scrofa celiac disease 2 mRNA, ... 36 2.4
BA000040_2172(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 36 2.4
AY499195_1(AY499195|pid:none) Synthetic construct paraoxonase PO... 36 2.4
AY028616_1(AY028616|pid:none) Calliphora vicina anterior fat bod... 36 2.4
CP000113_2791(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 36 3.1
CP000316_3055(CP000316|pid:none) Polaromonas sp. JS666, complete... 36 3.1
AL844509_293(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 36 3.1
CP001013_713(CP001013|pid:none) Leptothrix cholodnii SP-6, compl... 36 3.1
BT082556_1(BT082556|pid:none) Anoplopoma fimbria clone afim-evh-... 36 3.1
(Q62086) RecName: Full=Serum paraoxonase/arylesterase 2; ... 35 4.0
AM420293_3705(AM420293|pid:none) Saccharopolyspora erythraea NRR... 35 4.0
CP000075_764(CP000075|pid:none) Pseudomonas syringae pv. syringa... 35 5.3
CP001177_4855(CP001177|pid:none) Bacillus cereus AH187, complete... 35 5.3
AE017355_4602(AE017355|pid:none) Bacillus thuringiensis serovar ... 35 5.3
CP001037_1639(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 35 5.3
CU179680_298(CU179680|pid:none) Mycoplasma agalactiae PG2 chromo... 35 5.3
AM420293_4256(AM420293|pid:none) Saccharopolyspora erythraea NRR... 35 5.3
(Q62087) RecName: Full=Serum paraoxonase/lactonase 3; E... 35 5.3
L48514_1(L48514|pid:none) Mus musculus paraoxonase 2 (PON2) mRNA... 35 5.3
CP000857_2683(CP000857|pid:none) Salmonella enterica subsp. ente... 35 5.3
CP001127_2668(CP001127|pid:none) Salmonella enterica subsp. ente... 35 5.3
CP000485_4251(CP000485|pid:none) Bacillus thuringiensis str. Al ... 35 5.3
CP000927_620(CP000927|pid:none) Caulobacter sp. K31, complete ge... 35 5.3
AE017220_2670(AE017220|pid:none) Salmonella enterica subsp. ente... 35 5.3
CP000634_596(CP000634|pid:none) Agrobacterium vitis S4 chromosom... 35 5.3
(Q68FP2) RecName: Full=Serum paraoxonase/lactonase 3; E... 35 6.9
CP000099_3035(CP000099|pid:none) Methanosarcina barkeri str. Fus... 35 6.9
(Q6AXM8) RecName: Full=Serum paraoxonase/arylesterase 2; ... 35 6.9
CP001186_4950(CP001186|pid:none) Bacillus cereus G9842, complete... 35 6.9
H88244(H88244)protein T01B7.5 [imported] - Caenorhabditis elegans 35 6.9
CP000139_1080(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 34 9.0
(Q9BGN0) RecName: Full=Serum paraoxonase/lactonase 3; E... 34 9.0
AM180355_3512(AM180355|pid:none) Clostridium difficile 630 compl... 34 9.0
CU234118_3654(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 34 9.0
AY316747_127(AY316747|pid:none) Rhizobium sp. NGR234 megaplasmid... 34 9.0
AM269996_61(AM269996|pid:none) Aspergillus niger contig An02c001... 34 9.0
AY499197_1(AY499197|pid:none) Synthetic construct paraoxonase PO... 34 9.0
CU468135_3358(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 34 9.0
CP000141_1842(CP000141|pid:none) Carboxydothermus hydrogenoforma... 34 9.0
>CP000514_501(CP000514|pid:none) Marinobacter aquaeolei VT8, complete
genome.
Length = 363
Score = 130 bits (326), Expect = 1e-28
Identities = 75/212 (35%), Positives = 118/212 (55%), Gaps = 3/212 (1%)
Frame = +2
Query: 449 FVNDVIVGNDDMIYFTDSTSIAPILDNTGDWNTLIPSMYTLVTTVSHGKLLSYNPNTKET 628
F +DV++ D IYFTD++S D D + P HG+LL YNP T++T
Sbjct: 145 FTDDVVIAPDGRIYFTDASSRFQQPDYVLDLLEMRP----------HGRLLRYNPKTRKT 194
Query: 629 KVLMDGFKYSNGVAFDPKEESIFIGETTGCKVFRYWIKGANKGKSEVFIDNLPGYPDGVD 808
+VL+ ++NGVA P+ + + + ET ++ RYWI G G++EVF DNLPG+PD +
Sbjct: 195 EVLLGNLHFANGVAVSPQGDYVLVNETWKYRILRYWISGPKAGRAEVFADNLPGFPDNLA 254
Query: 809 VDFKEGKLYISIFGGRNWFIDLIHPYPILKNIFLRIP-YLKMRPQKPSIVVADTQTGKIL 985
VD G+ +++ RN +D +H P LK++ ++P LK +PQ +VVA + G++L
Sbjct: 255 VD-GGGRYWVAFPTLRNPRVDAMHKSPWLKDLVAKLPDSLKPKPQNYGLVVAFDRKGRML 313
Query: 986 NYFQTS--NDFPTITSTIEHNGKILIGNLLSD 1075
+ ITS H+G + G+L +D
Sbjct: 314 TSLHDTRGTHLQEITSVNPHDGVLYFGSLHND 345
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,462,979,434
Number of extensions: 27715874
Number of successful extensions: 81738
Number of sequences better than 10.0: 284
Number of HSP's gapped: 81566
Number of HSP's successfully gapped: 288
Length of query: 401
Length of database: 1,040,966,779
Length adjustment: 131
Effective length of query: 270
Effective length of database: 621,205,444
Effective search space: 167725469880
Effective search space used: 167725469880
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
1 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
2 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |