| Contig-U09442-1 |
| Contig ID |
Contig-U09442-1 |
| Contig update |
2002. 9.13 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
653 |
| Chromosome number (1..6, M) |
- |
| Chromosome length |
- |
| Start point |
- |
| End point |
- |
| Strand (PLUS/MINUS) |
- |
| Number of clones |
1 |
| Number of EST |
2 |
| Link to clone list |
U09442 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.16 |
| Homology vs DNA |
Query= Contig-U09442-1 (Contig-U09442-1Q) /CSM_Contig/Contig-U09442-1Q.Seq.d
(663 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU074017) Dictyostelium discoideum slug cDNA, clone SSJ270. 476 e-130 1
(C90887) Dictyostelium discoideum slug cDNA, clone SSJ270. 432 e-117 1
(BH132312) ENTOG15TR Entamoeba histolytica Sheared DNA Entam... 50 5e-07 2
(CT055047) Sus scrofa genomic clone PigE-118O7, genomic surv... 42 0.064 2
(AF498649) Entamoeba histolytica small heat shock protein (H... 40 0.23 2
(AC177962) Strongylocentrotus purpuratus clone R3-3049H23, W... 48 0.42 1
(AC177453) Strongylocentrotus purpuratus clone R3-1030K24, W... 48 0.42 1
(EY354356) CAWZ3033.rev CAWZ Helobdella robusta Primary Late... 48 0.42 1
(EY349766) CAWZ17230.rev CAWZ Helobdella robusta Primary Lat... 48 0.42 1
(EY312129) CAWX23849.rev CAWX Helobdella robusta Primary Ear... 48 0.42 1
(AC147501) Medicago truncatula chromosome 8 clone mth2-12n2,... 46 0.55 2
(CU468619) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 1.0 4
(DU945181) 376372 Tomato EcoRI BAC Library Solanum lycopersi... 36 1.2 2
(DU922495) 342191 Tomato EcoRI BAC Library Solanum lycopersi... 36 1.2 2
(AW738278) EST339705 tomato flower buds, anthesis, Cornell U... 36 1.2 2
(BX957329) Zebrafish DNA sequence from clone CH211-130P21 in... 46 1.7 1
(AL954656) Zebrafish DNA sequence from clone CH211-67N10 in ... 46 1.7 1
(AC149872) Xenopus tropicalis clone CH216-115D10, complete s... 46 1.7 1
(AC154702) Mus musculus BAC clone RP24-348D9 from chromosome... 46 1.7 1
(CU459032) Medicago truncatula chromosome 5 clone mth4-20f20... 46 1.7 1
(CT963131) M.truncatula DNA sequence from clone MTH2-167N2 o... 46 1.7 1
(CR954198) Medicago truncatula chromosome 5 clone mte1-67f21... 46 1.7 1
(AC155896) Medicago truncatula chromosome 2 clone mth2-85c24... 46 1.7 1
(AC151956) Medicago truncatula clone mth2-52p17, complete se... 46 1.7 1
(AC146910) Medicago truncatula chromosome 6 clone mth2-59i21... 46 1.7 1
(AC146865) Medicago truncatula clone mth2-36m14, complete se... 46 1.7 1
(AC146746) Medicago truncatula clone mth2-108p9, complete se... 46 1.7 1
(AC137701) Medicago truncatula clone mth2-35h1, complete seq... 46 1.7 1
(AC135461) Medicago truncatula clone mth2-34f24, complete se... 46 1.7 1
(CU041262) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 1.7 1
(AP009925) Lotus japonicus genomic DNA, clone: LjT15A10, TM2... 46 1.7 1
(AC231368) Medicago truncatula clone mth2-77f19, WORKING DRA... 46 1.7 1
(AC224041) Bos taurus clone CH240-451K22, WORKING DRAFT SEQU... 46 1.7 1
(AC219341) Bos taurus clone CH240-337K23, WORKING DRAFT SEQU... 46 1.7 1
(AC194850) Zea mays chromosome 10 clone CH201-258L7; ZMMBBc0... 46 1.7 1
(AC188742) Zea mays chromosome 10 clone CH201-228L11; ZMMBBc... 46 1.7 1
(AC181959) Strongylocentrotus purpuratus clone R3-1003E20, W... 46 1.7 1
(AC181834) Strongylocentrotus purpuratus clone R3-1022M21, W... 46 1.7 1
(ER386808) 1094426030707 Global-Ocean-Sampling_GS-34-01-01-1... 46 1.7 1
(CR295240) mte1-11O14RM1 BAC end, cultivar Jemalong A17 of M... 46 1.7 1
(BX215013) Danio rerio genomic clone DKEY-255C8, genomic sur... 46 1.7 1
(BX177393) Danio rerio genomic clone DKEY-184H18, genomic su... 46 1.7 1
(EG761694) EST_ssal_sjb_9930 ssalsjb mixed_tissue Salmo sala... 46 1.7 1
(AM977178) Sparus aurata EST, clone cDN13P0003M09, 5'-end se... 46 1.7 1
(AM962250) Sparus aurata EST, clone cDN06P0003L16, 5'-end se... 46 1.7 1
(CB484172) ccluwtbh006028 Coregonus clupeaformis head Corego... 46 1.7 1
(CA063006) ssalrgb524320 mixed_tissue Salmo salar cDNA, mRNA... 46 1.7 1
(FC757363) CBBN10015.rev CBBN Lottia gigantea 3,4,5,6.5d Lar... 46 1.7 1
(FC563276) CAWF489.rev CAWF Lottia gigantea from mantle (H) ... 46 1.7 1
(AC230735) Bos taurus clone CH240-500H20, WORKING DRAFT SEQU... 32 3.3 2
(AC114127) Rattus norvegicus clone CH230-72G19, *** SEQUENCI... 38 5.0 4
(AC013909) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 38 5.0 2
(AY714858) Uncultured archaeon GZfos33H6 clone GZfos33H6, **... 44 5.3 3
(AC224887) Bos taurus clone CH240-473N16, WORKING DRAFT SEQU... 42 6.0 3
(CT027690) Zebrafish DNA sequence from clone DKEY-184A13 in ... 44 6.6 1
(CR848683) Zebrafish DNA sequence from clone CH211-63I2 in l... 44 6.6 1
(CR450691) Zebrafish DNA sequence from clone CH211-77E10 in ... 44 6.6 1
(CR354381) Zebrafish DNA sequence from clone CH211-156J22 in... 44 6.6 1
(BX664631) Zebrafish DNA sequence from clone DKEY-28H18 in l... 44 6.6 1
(BX511178) Zebrafish DNA sequence from clone DKEY-221H15 in ... 44 6.6 1
(BX000489) Zebrafish DNA sequence from clone CH211-215E19 in... 44 6.6 1
(AC147215) Pan troglodytes BAC clone RP43-141N5 from chromos... 44 6.6 1
(AM437685) Vitis vinifera contig VV78X133541.6, whole genome... 44 6.6 1
(CS468864) Sequence 55 from Patent EP1748080. 44 6.6 1
(CS468863) Sequence 54 from Patent EP1748080. 44 6.6 1
(CS419341) Sequence 55 from Patent WO2006094836. 44 6.6 1
(CS419340) Sequence 54 from Patent WO2006094836. 44 6.6 1
(AK113837) Ciona intestinalis cDNA, clone:cicl012a17, full i... 44 6.6 1
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 44 6.6 1
(AC115682) Dictyostelium discoideum chromosome 2 map 4101105... 44 6.6 1
(AC004898) Homo sapiens PAC clone RP4-814D15 from 7q35-q36, ... 44 6.6 1
(AC157973) Strongylocentrotus purpuratus clone R3-4002B23, W... 44 6.6 1
(AC146387) Pan troglodytes chromosome UNK clone RP43-131G22,... 44 6.6 1
(AC130070) Rattus norvegicus clone CH230-301F4, *** SEQUENCI... 44 6.6 1
(AC127501) Homo sapiens chromosome 18 clone RP11-306J15 map ... 44 6.6 1
(AC106424) Rattus norvegicus clone CH230-146B3, *** SEQUENCI... 44 6.6 1
(CU927926) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 6.6 1
(CU407312) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 6.6 1
(CT009639) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 6.6 1
(BX890567) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 6.6 1
(BX511015) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 44 6.6 1
(AC229836) Monodelphis domestica clone VMRC18-748P7, WORKING... 44 6.6 1
(AC225309) Zea mays chromosome UNKNOWN clone CH201-64C1; ZMM... 44 6.6 1
(AC215259) Zea mays chromosome 9 clone CH201-186L17; ZMMBBc0... 44 6.6 1
(AC212582) Zea mays chromosome 9 clone CH201-386B20; ZMMBBc0... 44 6.6 1
(AC206224) Zea mays chromosome unknown clone CH201-502D18; Z... 44 6.6 1
(AC199089) Zea mays chromosome unknown clone CH201-186A20; Z... 44 6.6 1
(AC197735) Zea mays chromosome 7 clone CH201-193J2; ZMMBBc01... 44 6.6 1
(AC195402) Zea mays chromosome unknown clone ZMMBBb-463P11; ... 44 6.6 1
(AC179120) Strongylocentrotus purpuratus clone R3-4011I7, WO... 44 6.6 1
(AC168415) Strongylocentrotus purpuratus clone R3-4002B23, W... 44 6.6 1
(AZ189197) SP_1013_B2_A10_SP6E Strongylocentrotus purpuratus... 44 6.6 1
(EJ311195) 1095390214263 Global-Ocean-Sampling_GS-27-01-01-1... 44 6.6 1
(DX528519) GH_MBb0047M02f GH_MBb Gossypium hirsutum genomic ... 44 6.6 1
(AL001168) F.rubripes GSS sequence, clone 032C09aB7. 44 6.6 1
(DE453222) Bombyx mori genomic DNA, Fosmid clone:GBMFno46_j1... 44 6.6 1
(CG907710) ZMMBBb0520G22f ZMMBBb (HindIII) Zea mays subsp. m... 44 6.6 1
(CG693815) ZMMBBb0297G16.r ZMMBBb Zea mays subsp. mays genom... 44 6.6 1
(BZ522103) BOKAJ81TF BO_10_15_KB_nuc Brassica oleracea genom... 44 6.6 1
(BZ396137) EINBO95TF EI_10_12_KB Entamoeba invadens genomic ... 44 6.6 1
>(AU074017) Dictyostelium discoideum slug cDNA, clone SSJ270.
Length = 240
Score = 476 bits (240), Expect = e-130
Identities = 240/240 (100%)
Strand = Plus / Plus
Query: 1 gtttattctctcgttatcctggtatggaatattgtgatttgaaaaaagataaaaacacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttattctctcgttatcctggtatggaatattgtgatttgaaaaaagataaaaacacag 60
Query: 61 gaaaatcaaagggttttgcttatgttaactatagtagtcctcaagctgctcttttagcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaaaatcaaagggttttgcttatgttaactatagtagtcctcaagctgctcttttagcaa 120
Query: 121 aaaatgatttaaatggaattaaatatccaactagtcatactttaaaagttgttttcgctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaatgatttaaatggaattaaatatccaactagtcatactttaaaagttgttttcgctg 180
Query: 181 aaccattaggtataaaacagattaataataactttaataataatttacttccaccaaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaccattaggtataaaacagattaataataactttaataataatttacttccaccaaccc 240
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 587,265,819
Number of extensions: 35084612
Number of successful extensions: 2997632
Number of sequences better than 10.0: 129
Length of query: 663
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 639
Effective length of database: 97,308,875,965
Effective search space: 62180371741635
Effective search space used: 62180371741635
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.26 |
| Homology vs Protein |
Query= Contig-U09442-1 (Contig-U09442-1Q) /CSM_Contig/Contig-U09442-1Q.Seq.d
(663 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ720206_1(AJ720206|pid:none) Gallus gallus mRNA for hypothetica... 56 8e-07
(Q60900) RecName: Full=ELAV-like protein 3; AltName: Full=Hu-ant... 54 5e-06
BX004991_3(BX004991|pid:none) Zebrafish DNA sequence from clone ... 52 2e-05
BC072716_1(BC072716|pid:none) Danio rerio zgc:91918, mRNA (cDNA ... 51 3e-05
AY016023_9(AY016023|pid:none) Sphoeroides nephelus alpha globin ... 51 3e-05
CR761704_1(CR761704|pid:none) Xenopus tropicalis finished cDNA, ... 51 3e-05
BC065343_1(BC065343|pid:none) Danio rerio ELAV (embryonic lethal... 51 3e-05
BC136134_1(BC136134|pid:none) Xenopus tropicalis ELAV (embryonic... 51 3e-05
AL583843_2(AL583843|pid:none) Human DNA sequence from clone RP11... 50 4e-05
AL627425_2(AL627425|pid:none) Mouse DNA sequence from clone RP23... 50 4e-05
AB209294_1(AB209294|pid:none) Homo sapiens mRNA for ELAV (embryo... 50 4e-05
AL837505_1(AL837505|pid:none) Mouse DNA sequence from clone RP23... 50 4e-05
AY035379_1(AY035379|pid:none) Mus musculus ELAV-like neuronal pr... 50 4e-05
AL627425_8(AL627425|pid:none) Mouse DNA sequence from clone RP23... 50 4e-05
AL627425_4(AL627425|pid:none) Mouse DNA sequence from clone RP23... 50 4e-05
BC099348_1(BC099348|pid:none) Xenopus laevis RNA-binding protein... 50 4e-05
(P26378) RecName: Full=ELAV-like protein 4; AltName: Full=Parane... 50 4e-05
AY036909_1(AY036909|pid:none) Homo sapiens HUC (ELAVL3) mRNA, co... 50 4e-05
AK298817_1(AK298817|pid:none) Homo sapiens cDNA FLJ51957 complet... 50 4e-05
BC094189_1(BC094189|pid:none) Xenopus laevis ELAV (embryonic let... 50 4e-05
I39077(I39077) RNA-binding protein Hel-N2 - human &U29943_1(U29... 50 4e-05
AL837505_7(AL837505|pid:none) Mouse DNA sequence from clone RP23... 50 4e-05
AK141919_1(AK141919|pid:none) Mus musculus 12 days embryo spinal... 50 4e-05
AL583843_1(AL583843|pid:none) Human DNA sequence from clone RP11... 50 4e-05
BC127338_1(BC127338|pid:none) Xenopus tropicalis ELAV (embryonic... 50 4e-05
AY035378_1(AY035378|pid:none) Mus musculus ELAV-like neuronal pr... 50 4e-05
AL837505_4(AL837505|pid:none) Mouse DNA sequence from clone RP23... 50 4e-05
AF176675_1(AF176675|pid:none) Gallus gallus RNA-binding protein ... 50 4e-05
CR860401_1(CR860401|pid:none) Pongo abelii mRNA; cDNA DKFZp459N1... 50 4e-05
AL837505_6(AL837505|pid:none) Mouse DNA sequence from clone RP23... 50 4e-05
AL837505_2(AL837505|pid:none) Mouse DNA sequence from clone RP23... 50 4e-05
AX463223_1(AX463223|pid:none) Sequence 24 from Patent WO0249625.... 50 4e-05
AF041341_1(AF041341|pid:none) Mus musculus RNA binding protein E... 50 4e-05
BC170539_1(BC170539|pid:none) Xenopus laevis elav like 1, mRNA (... 50 4e-05
AX463221_1(AX463221|pid:none) Sequence 22 from Patent WO0249625.... 50 4e-05
(Q60899) RecName: Full=ELAV-like protein 2; AltName: Full=Hu-ant... 50 4e-05
I51678(I51678) ribonucleoprotein - African clawed frog &U17599_... 50 4e-05
AL583843_3(AL583843|pid:none) Human DNA sequence from clone RP11... 50 4e-05
AL161628_3(AL161628|pid:none) Human DNA sequence from clone RP11... 50 4e-05
AK014133_1(AK014133|pid:none) Mus musculus 13 days embryo head c... 50 4e-05
(Q12926) RecName: Full=ELAV-like protein 2; AltName: Full=Hu-ant... 50 4e-05
BC036071_1(BC036071|pid:none) Homo sapiens ELAV (embryonic letha... 50 4e-05
(Q61701) RecName: Full=ELAV-like protein 4; AltName: Full=Parane... 50 4e-05
AK079088_1(AK079088|pid:none) Mus musculus adult male diencephal... 50 4e-05
AY170627_1(AY170627|pid:none) Oncorhynchus mykiss RNA-binding pr... 46 8e-04
AF357912_1(AF357912|pid:none) Labeo rohita ribonucleoprotein mRN... 46 0.001
AF176674_1(AF176674|pid:none) Gallus gallus RNA-binding protein ... 45 0.001
AB011823_1(AB011823|pid:none) Schizosaccharomyces pombe mRNA for... 45 0.002
D89144_1(D89144|pid:none) Schizosaccharomyces pombe mRNA, partia... 45 0.002
(P78795) RecName: Full=Eukaryotic translation initiation factor ... 45 0.002
BC096985_1(BC096985|pid:none) Danio rerio RNA binding motif prot... 45 0.002
AM449626_1(AM449626|pid:none) Vitis vinifera contig VV78X003552.... 45 0.002
AE014134_536(AE014134|pid:none) Drosophila melanogaster chromoso... 45 0.002
(Q10B98) RecName: Full=Zinc finger CCCH domain-containing protei... 45 0.002
AX969680_1(AX969680|pid:none) Sequence 483 from Patent EP1104808. 45 0.002
AE014134_533(AE014134|pid:none) Drosophila melanogaster chromoso... 45 0.002
AF151837_1(AF151837|pid:none) Homo sapiens CGI-79 protein mRNA, ... 45 0.002
BC003676_1(BC003676|pid:none) Homo sapiens RNA binding motif pro... 45 0.002
X85111_1(X85111|pid:none) X.laevis mRNA for XEL-1. 45 0.002
BC105582_1(BC105582|pid:none) Homo sapiens RNA binding motif pro... 45 0.002
S55886_1(S55886|pid:none) Drosophila melanogaster RRM9 (rbp9) ge... 45 0.002
BT045701_1(BT045701|pid:none) Salmo salar clone ssal-rgf-529-045... 45 0.002
T15706(T15706) hypothetical protein C30B5.4 - Caenorhabditis ele... 44 0.003
AK160232_1(AK160232|pid:none) Mus musculus 11 days embryo whole ... 44 0.003
BT038813_1(BT038813|pid:none) Zea mays full-length cDNA clone ZM... 44 0.003
BT033207_1(BT033207|pid:none) Zea mays full-length cDNA clone ZM... 44 0.003
AM910993_114(AM910993|pid:none) Plasmodium knowlesi strain H chr... 44 0.004
AL513445_14(AL513445|pid:none) Neurospora crassa DNA linkage gro... 44 0.004
(Q6DRG1) RecName: Full=RNA-binding protein 42; AltName: Full=RNA... 44 0.004
FN357347_16(FN357347|pid:none) Schistosoma mansoni genome sequen... 44 0.004
CP000863_452(CP000863|pid:none) Acinetobacter baumannii ACICU, c... 44 0.005
AM471738_1(AM471738|pid:none) Vitis vinifera contig VV78X179691.... 44 0.005
(P40565) RecName: Full=U2 snRNP component IST3; AltName: Full=U2... 44 0.005
DQ648522_1(DQ648522|pid:none) Bombyx mori RNA binding motif prot... 44 0.005
AC002115_1(AC002115|pid:none) Human DNA from overlapping chromos... 43 0.007
(Q6AXT7) RecName: Full=RNA-binding protein 42; AltName: Full=RNA... 43 0.007
(Q0P5L0) RecName: Full=RNA-binding protein 42; AltName: Full=RNA... 43 0.007
BC002868_1(BC002868|pid:none) Homo sapiens RNA binding motif pro... 43 0.007
(Q91V81) RecName: Full=RNA-binding protein 42; AltName: Full=RNA... 43 0.007
AM457396_1(AM457396|pid:none) Vitis vinifera contig VV78X093900.... 43 0.007
BC086269_1(BC086269|pid:none) Xenopus laevis hypothetical LOC495... 43 0.007
AK151000_1(AK151000|pid:none) Mus musculus bone marrow macrophag... 43 0.007
AP005411_35(AP005411|pid:none) Oryza sativa Japonica Group genom... 43 0.007
BC044184_1(BC044184|pid:none) Danio rerio ELAV (embryonic lethal... 43 0.009
CP001328_369(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 43 0.009
AF533016_1(AF533016|pid:none) Salmo salar hyperosmotic glycine r... 42 0.012
BT057118_1(BT057118|pid:none) Salmo salar clone ssal-rgb2-592-00... 42 0.012
AY048286_1(AY048286|pid:none) Arabidopsis thaliana AT4g36960/C7A... 42 0.012
AL844509_578(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 42 0.012
BT044019_1(BT044019|pid:none) Salmo salar clone HM5_1035 hyperos... 42 0.012
BT048518_1(BT048518|pid:none) Salmo salar clone ssal-evf-501-381... 42 0.012
AF176673_1(AF176673|pid:none) Gallus gallus RNA-binding protein ... 42 0.016
AK301013_1(AK301013|pid:none) Homo sapiens cDNA FLJ60076 complet... 42 0.016
AB168603_1(AB168603|pid:none) Macaca fascicularis testis cDNA cl... 42 0.016
BC102495_1(BC102495|pid:none) Bos taurus ELAV (embryonic lethal,... 42 0.016
AY506544_1(AY506544|pid:none) Lycopersicon esculentum DNA-bindin... 42 0.021
EF384209_1(EF384209|pid:none) Platynereis dumerilii Elav mRNA, c... 42 0.021
AE014297_277(AE014297|pid:none) Drosophila melanogaster chromoso... 42 0.021
CR382124_564(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 42 0.021
AE017347_305(AE017347|pid:none) Cryptococcus neoformans var. neo... 42 0.021
U79565_1(U79565|pid:none) Macropus eugenii RBM1 mRNA, complete c... 42 0.021
AM920437_1645(AM920437|pid:none) Penicillium chrysogenum Wiscons... 42 0.021
EF187286_1(EF187286|pid:none) Brassica juncea RNA-binding protei... 41 0.027
CP000975_286(CP000975|pid:none) Methylacidiphilum infernorum V4,... 41 0.027
AM920427_1095(AM920427|pid:none) Penicillium chrysogenum Wiscons... 41 0.027
BT074644_1(BT074644|pid:none) Osmerus mordax clone omor-rgc-516-... 41 0.035
BX548154_1(BX548154|pid:none) clone A24K23, A41I8 of Tetraodon n... 41 0.035
CR761911_1(CR761911|pid:none) Xenopus tropicalis finished cDNA, ... 41 0.035
CU633901_307(CU633901|pid:none) Podospora anserina genomic DNA c... 41 0.035
CR382131_970(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 41 0.035
BC105262_1(BC105262|pid:none) Bos taurus RNA binding motif prote... 40 0.046
AE017349_319(AE017349|pid:none) Cryptococcus neoformans var. neo... 40 0.046
CR940348_697(CR940348|pid:none) Theileria annulata strain Ankara... 40 0.046
AM270131_43(AM270131|pid:none) Aspergillus niger contig An07c013... 40 0.046
AF069682_1(AF069682|pid:none) Homo sapiens testes specific heter... 40 0.046
AC022287_14(AC022287|pid:none) Arabidopsis thaliana chromosome I... 40 0.046
(Q8IUH3) RecName: Full=RNA-binding protein 45; AltName: Full=RNA... 40 0.046
(Q29RT0) RecName: Full=Heterogeneous nuclear ribonucleoprotein G... 40 0.046
AF029351_1(AF029351|pid:none) Nicotiana tabacum putative RNA bin... 40 0.046
(Q8N7X1) RecName: Full=Putative uncharacterized protein CXorf55; 40 0.046
BC057796_1(BC057796|pid:none) Homo sapiens RNA binding motif pro... 40 0.046
AK292271_1(AK292271|pid:none) Homo sapiens cDNA FLJ76931 complet... 40 0.046
AJ292768_1(AJ292768|pid:none) Nicotiana plumbaginifolia partial ... 40 0.046
(A4QUF0) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 40 0.060
AK089088_1(AK089088|pid:none) Mus musculus 2 days neonate thymus... 40 0.060
(P70372) RecName: Full=ELAV-like protein 1; AltName: Full=Hu-ant... 40 0.060
CP000733_1149(CP000733|pid:none) Coxiella burnetii Dugway 5J108-... 40 0.060
CP000890_1144(CP000890|pid:none) Coxiella burnetii RSA 331, comp... 40 0.060
AE016828_1012(AE016828|pid:none) Coxiella burnetii RSA 493, comp... 40 0.060
AK148528_1(AK148528|pid:none) Mus musculus adult pancreas islet ... 40 0.060
AK034536_1(AK034536|pid:none) Mus musculus 12 days embryo embryo... 40 0.060
CP001334_56(CP001334|pid:none) Micromonas sp. RCC299 chromosome ... 40 0.060
AF279289_1(AF279289|pid:none) Homo sapiens testes-specific heter... 40 0.060
DQ268861_1(DQ268861|pid:none) Solanum tuberosum clone 180D07 oli... 40 0.060
AK140861_1(AK140861|pid:none) Mus musculus 16 days embryo head c... 40 0.079
(Q8BHN5) RecName: Full=RNA-binding protein 45; AltName: Full=RNA... 40 0.079
AB023044_25(AB023044|pid:none) Arabidopsis thaliana genomic DNA,... 40 0.079
AB168869_1(AB168869|pid:none) Macaca fascicularis testis cDNA, c... 40 0.079
CU633897_96(CU633897|pid:none) Podospora anserina genomic DNA ch... 40 0.079
(Q6BT10) RecName: Full=Eukaryotic translation initiation factor ... 40 0.079
AJ237847_1(AJ237847|pid:none) Mus musculus mRNA for heterogeneou... 40 0.079
AF370132_1(AF370132|pid:none) Arabidopsis thaliana unknown prote... 40 0.079
S41766(S41766;S43202)heterogeneous nuclear ribonucleoprotein G -... 40 0.079
AJ237846_1(AJ237846|pid:none) Mus musculus mRNA for heterogeneou... 40 0.079
(A5A6M3) RecName: Full=Heterogeneous nuclear ribonucleoprotein G... 40 0.079
AK304868_1(AK304868|pid:none) Homo sapiens cDNA FLJ59107 complet... 40 0.079
Z23064_1(Z23064|pid:none) H.sapiens mRNA gene for hnRNP G protein. 40 0.079
CU928170_557(CU928170|pid:none) Kluyveromyces thermotolerans str... 40 0.079
CP000777_1786(CP000777|pid:none) Leptospira biflexa serovar Pato... 40 0.079
FN392319_362(FN392319|pid:none) Pichia pastoris GS115 chromosome... 40 0.079
AB441821_1(AB441821|pid:none) Tokudaia osimensis RBMX gene for R... 40 0.079
AF034741_1(AF034741|pid:none) Macropus eugenii heterogeneous nuc... 39 0.10
AY394938_1(AY394938|pid:none) Danio rerio clone RK045A2G06 RNA b... 39 0.10
BT058737_1(BT058737|pid:none) Salmo salar clone ssal-rgf-002-150... 39 0.10
(O94290) RecName: Full=U2 snRNP component ist3; AltName: Full=RN... 39 0.10
(Q05196) RecName: Full=Polyadenylate-binding protein 5; ... 39 0.13
BT043684_1(BT043684|pid:none) Salmo salar clone HM5_1838 hyperos... 39 0.13
DQ284479_1(DQ284479|pid:none) Solanum tuberosum clone 150D12 DNA... 39 0.13
AK005907_1(AK005907|pid:none) Mus musculus adult male testis cDN... 39 0.13
(Q8CFD1) RecName: Full=RNA-binding protein 45; AltName: Full=RNA... 39 0.13
BT057440_1(BT057440|pid:none) Salmo salar clone ssal-evf-569-239... 39 0.13
DQ120650_1(DQ120650|pid:none) Homo sapiens RBM1 gene, partial cds. 39 0.13
FN392319_768(FN392319|pid:none) Pichia pastoris GS115 chromosome... 39 0.13
AB462999_1(AB462999|pid:none) Synthetic construct DNA, clone: pF... 39 0.13
DQ120651_1(DQ120651|pid:none) Pan troglodytes RBM1 gene, partial... 39 0.13
DQ120655_1(DQ120655|pid:none) Cercopithecus sabaeus RBM1 gene, p... 39 0.13
(O35479) RecName: Full=Heterogeneous nuclear ribonucleoprotein G... 39 0.18
AJ717349_1(AJ717349|pid:none) Danio rerio mRNA for RNA binding m... 39 0.18
BC070649_1(BC070649|pid:none) Xenopus laevis hypothetical protei... 39 0.18
BC157792_1(BC157792|pid:none) Xenopus tropicalis hypothetical pr... 39 0.18
CP000139_431(CP000139|pid:none) Bacteroides vulgatus ATCC 8482, ... 39 0.18
BT050206_1(BT050206|pid:none) Salmo salar clone ssal-evf-501-088... 39 0.18
BT046098_1(BT046098|pid:none) Salmo salar clone ssal-rgf-541-227... 39 0.18
AM494962_45(AM494962|pid:none) Leishmania braziliensis chromosom... 39 0.18
BC071467_1(BC071467|pid:none) Danio rerio poly-U binding splicin... 38 0.23
(P84586) RecName: Full=Heterogeneous nuclear ribonucleoprotein G... 38 0.23
CP000840_74(CP000840|pid:none) Acaryochloris marina MBIC11017 pl... 38 0.23
AP007151_1217(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 38 0.23
AM920431_1448(AM920431|pid:none) Penicillium chrysogenum Wiscons... 38 0.23
EF640688_1(EF640688|pid:none) Prunus dulcis clone Pdbcs-E35 puta... 38 0.23
AL772146_2(AL772146|pid:none) Zebrafish DNA sequence from clone ... 38 0.23
CU928179_157(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 38 0.23
(Q6IQE0) RecName: Full=Poly(U)-binding-splicing factor PUF60-B; ... 38 0.23
(Q9UT83) RecName: Full=Meiotically up-regulated gene 28 protein;... 38 0.23
AJ344538_1(AJ344538|pid:none) Nicotiana tabacum mRNA for nucleic... 38 0.23
BC043735_1(BC043735|pid:none) Xenopus laevis RNA-binding protein... 38 0.30
A40252(A40252)elav protein - fruit fly (Drosophila virilis) 38 0.30
AY854826_1(AY854826|pid:none) Drosophila americana strain FP99.2... 38 0.30
DQ648525_1(DQ648525|pid:none) Bombyx mori nucleolar phosphoprote... 38 0.30
FB912281_1(FB912281|pid:none) Sequence 131554 from Patent WO2008... 38 0.30
EF635076_1(EF635076|pid:none) Drosophila littoralis strain Kemi9... 38 0.30
BC135736_1(BC135736|pid:none) Xenopus tropicalis hypothetical pr... 38 0.30
EF188910_1(EF188910|pid:none) Drosophila recens strain NH_ST_6 e... 38 0.30
AY854860_1(AY854860|pid:none) Drosophila americana strain OR01.4... 38 0.30
EF188911_1(EF188911|pid:none) Drosophila recens strain NH_ST_7 e... 38 0.30
EF188917_1(EF188917|pid:none) Drosophila recens strain NY_ST_14 ... 38 0.30
EF188903_1(EF188903|pid:none) Drosophila recens strain MI_ST_6 e... 38 0.30
AY854839_1(AY854839|pid:none) Drosophila americana strain FP99.5... 38 0.30
EF188894_1(EF188894|pid:none) Drosophila recens strain MN_ST_3 e... 38 0.30
(Q2H0U6) RecName: Full=Eukaryotic translation initiation factor ... 38 0.30
EU492544_1(EU492544|pid:none) Penaeus monodon transformer-2 prot... 38 0.30
EF188893_1(EF188893|pid:none) Drosophila recens strain MN_ST_2 e... 38 0.30
CR378681_57(CR378681|pid:none) Photobacterium profundum SS9 chro... 38 0.30
EF188935_1(EF188935|pid:none) Drosophila subquinaria elav (elav)... 38 0.30
AC007519_23(AC007519|pid:none) Sequence of BAC F16N3 from Arabid... 38 0.30
BX842646_292(BX842646|pid:none) Bdellovibrio bacteriovorus compl... 38 0.30
AY313137_1(AY313137|pid:none) Saccoglossus kowalevskii Hu/elav m... 38 0.30
EF635077_1(EF635077|pid:none) Drosophila montana strain Kemi96 e... 38 0.30
EF188916_1(EF188916|pid:none) Drosophila recens strain NY_ST_13 ... 38 0.30
EF188892_1(EF188892|pid:none) Drosophila recens strain MN_ST_1 e... 38 0.30
EU492545_1(EU492545|pid:none) Penaeus monodon variant transforme... 38 0.30
FN357349_16(FN357349|pid:none) Schistosoma mansoni genome sequen... 38 0.30
AC007519_24(AC007519|pid:none) Sequence of BAC F16N3 from Arabid... 38 0.30
AY854856_1(AY854856|pid:none) Drosophila americana strain OR01.1... 38 0.30
EF188900_1(EF188900|pid:none) Drosophila recens strain MI_ST_14 ... 38 0.30
AP000419_3(AP000419|pid:none) Arabidopsis thaliana genomic DNA, ... 37 0.39
FJ438505_1(FJ438505|pid:none) Epinephelus coioides hyperosmotic ... 37 0.39
EU965523_1(EU965523|pid:none) Zea mays clone 286662 nucleolysin ... 37 0.39
AB207268_1(AB207268|pid:none) Bombyx mori Sxl mRNA for sex-letha... 37 0.39
(O23212) RecName: Full=Splicing factor U2af large subunit A; Alt... 37 0.39
(Q5U1W5) RecName: Full=U11/U12 small nuclear ribonucleoprotein 3... 37 0.39
AF527809_4(AF527809|pid:none) Sorghum bicolor clone BAC SB_BBc02... 37 0.39
AP007151_219(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 37 0.39
BT066563_1(BT066563|pid:none) Zea mays full-length cDNA clone ZM... 37 0.39
DQ209268_1(DQ209268|pid:none) Bombyx mori sex-lethal isoform 1 (... 37 0.39
CU640366_1180(CU640366|pid:none) Podospora anserina genomic DNA ... 37 0.39
FN392322_751(FN392322|pid:none) Pichia pastoris GS115 chromosome... 37 0.39
(A3GGU2) RecName: Full=Eukaryotic translation initiation factor ... 37 0.39
FM992690_195(FM992690|pid:none) Candida dubliniensis CD36 chromo... 37 0.39
BT033553_1(BT033553|pid:none) Zea mays full-length cDNA clone ZM... 37 0.39
AE016817_417(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 37 0.39
CP000749_1521(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 37 0.39
AK226472_1(AK226472|pid:none) Arabidopsis thaliana mRNA for puta... 37 0.39
FN357312_50(FN357312|pid:none) Schistosoma mansoni genome sequen... 37 0.39
AY084821_1(AY084821|pid:none) Arabidopsis thaliana clone 118696 ... 37 0.39
(Q59ZV5) RecName: Full=Eukaryotic translation initiation factor ... 37 0.51
(A2Q908) RecName: Full=Eukaryotic translation initiation factor ... 37 0.51
AK161667_1(AK161667|pid:none) Mus musculus 8 days embryo whole b... 37 0.51
(Q9V535) RecName: Full=RNA-binding protein 8A; AltName: Full=Pro... 37 0.51
AY071005_1(AY071005|pid:none) Drosophila melanogaster RE09075 fu... 37 0.51
(Q6DRC4) RecName: Full=Eukaryotic translation initiation factor ... 37 0.51
BT049926_1(BT049926|pid:none) Salmo salar clone ssal-eve-552-345... 37 0.51
EF678448_1(EF678448|pid:none) Picea sitchensis clone WS02921_P04... 37 0.51
BX842649_260(BX842649|pid:none) Bdellovibrio bacteriovorus compl... 37 0.51
BT047623_1(BT047623|pid:none) Salmo salar clone ssal-evf-578-004... 37 0.51
EF081993_1(EF081993|pid:none) Picea sitchensis clone WS0276_H13 ... 37 0.51
(A7EHM8) RecName: Full=Eukaryotic translation initiation factor ... 37 0.51
FM992688_1307(FM992688|pid:none) Candida dubliniensis CD36 chrom... 37 0.51
AL606453_1(AL606453|pid:none) Oryza sativa genomic DNA, chromoso... 37 0.51
CT978603_1079(CT978603|pid:none) Synechococcus sp. RCC307 genomi... 37 0.51
AB325927_1(AB325927|pid:none) Sorogena stoianovitchae stf4 mRNA ... 37 0.51
AP008210_766(AP008210|pid:none) Oryza sativa (japonica cultivar-... 37 0.51
AK304573_1(AK304573|pid:none) Homo sapiens cDNA FLJ54953 complet... 37 0.51
(Q1HQN4) RecName: Full=Eukaryotic translation initiation factor ... 37 0.51
(Q16560) RecName: Full=U11/U12 small nuclear ribonucleoprotein 3... 37 0.51
BT038752_1(BT038752|pid:none) Zea mays full-length cDNA clone ZM... 37 0.67
CP000435_14(CP000435|pid:none) Synechococcus sp. CC9311, complet... 37 0.67
AL161590_22(AL161590|pid:none) Arabidopsis thaliana DNA chromoso... 37 0.67
AY626066_4(AY626066|pid:none) Bombyx mori transformer-2 protein ... 37 0.67
EU965676_1(EU965676|pid:none) Zea mays clone 287902 glycine-rich... 37 0.67
AC024791_22(AC024791|pid:none) Caenorhabditis elegans cosmid Y47... 37 0.67
BX569692_310(BX569692|pid:none) Synechococcus sp. WH8102 complet... 37 0.67
AK039064_1(AK039064|pid:none) Mus musculus adult male hypothalam... 37 0.67
BX548175_1418(BX548175|pid:none) Prochlorococcus marinus MIT9313... 37 0.67
FB912275_1(FB912275|pid:none) Sequence 131548 from Patent WO2008... 37 0.67
AY626066_5(AY626066|pid:none) Bombyx mori transformer-2 protein ... 37 0.67
AY626066_1(AY626066|pid:none) Bombyx mori transformer-2 protein ... 37 0.67
BT063107_1(BT063107|pid:none) Zea mays full-length cDNA clone ZM... 37 0.67
DQ215256_1(DQ215256|pid:none) Taeniopygia guttata clone 0058P005... 37 0.67
AY626066_6(AY626066|pid:none) Bombyx mori transformer-2 protein ... 37 0.67
EF085413_1(EF085413|pid:none) Picea sitchensis clone WS0292_C17 ... 37 0.67
BT052847_1(BT052847|pid:none) Medicago truncatula clone MTYFL_FM... 37 0.67
BT083094_1(BT083094|pid:none) Anoplopoma fimbria clone afim-evh-... 37 0.67
CU928175_517(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 37 0.67
FM992688_167(FM992688|pid:none) Candida dubliniensis CD36 chromo... 37 0.67
AC144431_33(AC144431|pid:none) Medicago truncatula clone mth2-21... 37 0.67
BT038060_1(BT038060|pid:none) Zea mays full-length cDNA clone ZM... 37 0.67
AM502243_51(AM502243|pid:none) Leishmania infantum chromosome 25. 37 0.67
(Q9D384) RecName: Full=U11/U12 small nuclear ribonucleoprotein 3... 37 0.67
BT038108_1(BT038108|pid:none) Zea mays full-length cDNA clone ZM... 37 0.67
CP000554_962(CP000554|pid:none) Prochlorococcus marinus str. MIT... 37 0.67
AC024791_21(AC024791|pid:none) Caenorhabditis elegans cosmid Y47... 37 0.67
AE015928_3838(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 37 0.67
AY626066_2(AY626066|pid:none) Bombyx mori transformer-2 protein ... 37 0.67
BT034390_1(BT034390|pid:none) Zea mays full-length cDNA clone ZM... 37 0.67
FB923612_1(FB923612|pid:none) Sequence 142885 from Patent WO2008... 37 0.67
FN392322_746(FN392322|pid:none) Pichia pastoris GS115 chromosome... 37 0.67
EF085608_1(EF085608|pid:none) Picea sitchensis clone WS0289_F11 ... 36 0.87
BT056193_1(BT056193|pid:none) Zea mays full-length cDNA clone ZM... 36 0.87
AE015928_1887(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 36 0.87
CR857074_1(CR857074|pid:none) Pongo abelii mRNA; cDNA DKFZp468L0... 36 0.87
(Q9UHX1) RecName: Full=Poly(U)-binding-splicing factor PUF60; Al... 36 0.87
FN357917_1(FN357917|pid:none) Schistosoma mansoni genome sequenc... 36 0.87
BC011265_1(BC011265|pid:none) Homo sapiens poly-U binding splici... 36 0.87
EF085052_1(EF085052|pid:none) Picea sitchensis clone WS0286_P07 ... 36 0.87
CU928174_487(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 36 0.87
BC009734_1(BC009734|pid:none) Homo sapiens poly-U binding splici... 36 0.87
CP001326_273(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 36 0.87
AF165892_1(AF165892|pid:none) Rattus norvegicus RNA-binding prot... 36 0.87
AY140014_1(AY140014|pid:none) Arabidopsis thaliana putative U2 s... 36 0.87
BC158521_1(BC158521|pid:none) Xenopus tropicalis hypothetical pr... 36 0.87
AE017341_447(AE017341|pid:none) Cryptococcus neoformans var. neo... 36 0.87
BC119437_1(BC119437|pid:none) Mus musculus poly-U binding splici... 36 0.87
BT035664_1(BT035664|pid:none) Zea mays full-length cDNA clone ZM... 36 0.87
(Q1LZH0) RecName: Full=U11/U12 small nuclear ribonucleoprotein 3... 36 0.87
AF217197_1(AF217197|pid:none) Homo sapiens FBP-interacting repre... 36 0.87
(Q5R469) RecName: Full=Poly(U)-binding-splicing factor PUF60; Al... 36 0.87
(Q1DI97) RecName: Full=Eukaryotic translation initiation factor ... 36 0.87
AK151526_1(AK151526|pid:none) Mus musculus bone marrow macrophag... 36 0.87
AC137830_32(AC137830|pid:none) Medicago truncatula clone mth2-33... 36 0.87
CP001575_571(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 36 0.87
AK103536_1(AK103536|pid:none) Oryza sativa Japonica Group cDNA c... 36 0.87
FN357323_8(FN357323|pid:none) Schistosoma mansoni genome sequenc... 36 0.87
AM482871_2(AM482871|pid:none) Vitis vinifera contig VV78X274978.... 36 0.87
(Q2GSX8) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 36 0.87
(Q2HJG2) RecName: Full=Poly(U)-binding-splicing factor PUF60; Al... 36 0.87
U51586_1(U51586|pid:none) Human siah binding protein 1 (SiahBP1)... 36 0.87
(Q7QJV0) RecName: Full=Eukaryotic translation initiation factor ... 36 0.87
FN392321_814(FN392321|pid:none) Pichia pastoris GS115 chromosome... 36 0.87
AK149632_1(AK149632|pid:none) Mus musculus bone marrow macrophag... 36 0.87
AC018908_5(AC018908|pid:none) Arabidopsis thaliana chromosome 1 ... 36 0.87
AM270223_9(AM270223|pid:none) Aspergillus niger contig An11c0060... 36 1.1
BT060465_1(BT060465|pid:none) Zea mays full-length cDNA clone ZM... 36 1.1
AL844509_593(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 36 1.1
(B3P935) RecName: Full=Eukaryotic translation initiation factor ... 36 1.1
AC151621_26(AC151621|pid:none) Medicago truncatula clone mth2-14... 36 1.1
EU972323_1(EU972323|pid:none) Zea mays clone 379656 hypothetical... 36 1.1
AM455445_4(AM455445|pid:none) Vitis vinifera contig VV78X036406.... 36 1.1
EU042108_1(EU042108|pid:none) Epinephelus coioides Hnrpa01 prote... 36 1.1
(Q5AJS6) RecName: Full=Multiple RNA-binding domain-containing pr... 36 1.1
T25186(T25186) hypothetical protein T23F6.4 - Caenorhabditis ele... 36 1.1
CP000497_217(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 36 1.1
(Q6CSV3) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 36 1.1
BT045197_1(BT045197|pid:none) Salmo salar clone ssal-rgf-514-254... 36 1.1
BC161141_1(BC161141|pid:none) Xenopus tropicalis RNA binding mot... 36 1.1
AB207971_1(AB207971|pid:none) Lolium perenne gene for glycine-ri... 36 1.1
BX323559_6(BX323559|pid:none) Zebrafish DNA sequence from clone ... 36 1.1
AC120539_27(AC120539|pid:none) Oryza sativa (japonica cultivar-g... 36 1.1
AC127168_23(AC127168|pid:none) Medicago truncatula clone mth2-15... 36 1.1
CR857371_1(CR857371|pid:none) Pongo abelii mRNA; cDNA DKFZp469F1... 36 1.1
(Q9W4X7) RecName: Full=Eukaryotic translation initiation factor ... 36 1.1
CR380959_163(CR380959|pid:none) Candida glabrata strain CBS138 c... 36 1.1
BX323559_10(BX323559|pid:none) Zebrafish DNA sequence from clone... 36 1.1
BT043938_1(BT043938|pid:none) Salmo salar clone HM4_1724 embryon... 36 1.1
AM463492_1(AM463492|pid:none) Vitis vinifera contig VV78X020726.... 36 1.1
BC116459_1(BC116459|pid:none) Xenopus laevis ribonucleoprotein, ... 36 1.1
(B4J4G8) RecName: Full=Eukaryotic translation initiation factor ... 36 1.1
BT073963_1(BT073963|pid:none) Oncorhynchus mykiss clone omyk-evo... 36 1.1
AY178581_1(AY178581|pid:none) Sciara ocellaris sex-lethal mRNA, ... 36 1.1
BT049685_1(BT049685|pid:none) Salmo salar clone ssal-rgb2-559-08... 36 1.1
BT052980_1(BT052980|pid:none) Medicago truncatula clone MTYFL_FM... 36 1.1
(B4MA85) RecName: Full=Eukaryotic translation initiation factor ... 36 1.1
AK303668_1(AK303668|pid:none) Homo sapiens cDNA FLJ58561 complet... 36 1.1
AF234183_1(AF234183|pid:none) Lucilia cuprina sex-lethal protein... 36 1.1
BX323559_5(BX323559|pid:none) Zebrafish DNA sequence from clone ... 36 1.1
BT045252_1(BT045252|pid:none) Salmo salar clone ssal-rgf-516-227... 36 1.1
AM425899_1(AM425899|pid:none) Vitis vinifera contig VV78X141954.... 36 1.1
(B3MYX2) RecName: Full=Eukaryotic translation initiation factor ... 36 1.1
BT038473_1(BT038473|pid:none) Zea mays full-length cDNA clone ZM... 36 1.1
FN392320_99(FN392320|pid:none) Pichia pastoris GS115 chromosome ... 36 1.1
(Q2URB7) RecName: Full=Eukaryotic translation initiation factor ... 35 1.5
AL732352_13(AL732352|pid:none) Oryza sativa genomic DNA, chromos... 35 1.5
BC077813_1(BC077813|pid:none) Xenopus laevis RNA-binding region ... 35 1.5
AK303910_1(AK303910|pid:none) Homo sapiens cDNA FLJ58465 complet... 35 1.5
CR749443_1(CR749443|pid:none) Homo sapiens mRNA; cDNA DKFZp781C0... 35 1.5
(Q8VH51) RecName: Full=RNA-binding protein 39; AltName: Full=RNA... 35 1.5
AK297520_1(AK297520|pid:none) Homo sapiens cDNA FLJ59035 complet... 35 1.5
BC004000_1(BC004000|pid:none) Mus musculus RNA binding motif pro... 35 1.5
AE017354_250(AE017354|pid:none) Legionella pneumophila subsp. pn... 35 1.5
BC167878_1(BC167878|pid:none) Xenopus tropicalis cDNA clone MGC:... 35 1.5
CR628336_321(CR628336|pid:none) Legionella pneumophila str. Pari... 35 1.5
CU928168_172(CU928168|pid:none) Kluyveromyces thermotolerans str... 35 1.5
CP000675_323(CP000675|pid:none) Legionella pneumophila str. Corb... 35 1.5
(Q05AT9) RecName: Full=U11/U12 small nuclear ribonucleoprotein 3... 35 1.5
AK299165_1(AK299165|pid:none) Homo sapiens cDNA FLJ58459 complet... 35 1.5
AJ715415_1(AJ715415|pid:none) Bactrocera oleae mRNA for sex-leth... 35 1.5
BC108818_1(BC108818|pid:none) Xenopus laevis hypothetical protei... 35 1.5
BC093451_1(BC093451|pid:none) Xenopus tropicalis RNA binding mot... 35 1.5
BC075146_1(BC075146|pid:none) Xenopus laevis MGC81970 protein, m... 35 1.5
FN317170_1(FN317170|pid:none) Schistosoma japonicum isolate Anhu... 35 1.5
BX537770_1(BX537770|pid:none) Homo sapiens mRNA; cDNA DKFZp781I1... 35 1.5
BT033717_1(BT033717|pid:none) Zea mays full-length cDNA clone ZM... 35 1.5
AK154989_1(AK154989|pid:none) Mus musculus NOD-derived CD11c +ve... 35 1.5
FN357468_3(FN357468|pid:none) Schistosoma mansoni genome sequenc... 35 1.5
(Q5K9M4) RecName: Full=Eukaryotic translation initiation factor ... 35 1.5
FN317772_1(FN317772|pid:none) Schistosoma japonicum isolate Anhu... 35 1.5
AE000520_352(AE000520|pid:none) Treponema pallidum subsp. pallid... 35 1.5
BC108814_1(BC108814|pid:none) Xenopus laevis hypothetical protei... 35 1.5
(Q54Y98) RecName: Full=Transformer-2-beta homolog; AltName: Full... 35 1.5
CU633867_79(CU633867|pid:none) Podospora anserina genomic DNA ch... 35 1.5
AP008210_2309(AP008210|pid:none) Oryza sativa (japonica cultivar... 35 1.5
CP000890_872(CP000890|pid:none) Coxiella burnetii RSA 331, compl... 35 1.5
AK126158_1(AK126158|pid:none) Homo sapiens cDNA FLJ44170 fis, cl... 35 1.5
EF082940_1(EF082940|pid:none) Picea sitchensis clone WS02726_E04... 35 1.5
BC067984_1(BC067984|pid:none) Xenopus tropicalis apoptotic chrom... 35 1.5
AK299678_1(AK299678|pid:none) Homo sapiens cDNA FLJ59214 complet... 35 1.5
(B4G3E2) RecName: Full=Eukaryotic translation initiation factor ... 35 1.9
BC054288_1(BC054288|pid:none) Xenopus laevis MKI67 FHA domain-in... 35 1.9
(Q0U1G2) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 35 1.9
(Q298C0) RecName: Full=Eukaryotic translation initiation factor ... 35 1.9
FN321810_1(FN321810|pid:none) Schistosoma japonicum isolate Anhu... 35 1.9
BX649404_2(BX649404|pid:none) Zebrafish DNA sequence from clone ... 35 1.9
FN357407_24(FN357407|pid:none) Schistosoma mansoni genome sequen... 35 1.9
(P15771) RecName: Full=Nucleolin; AltName: Full=Protein C23; &D... 35 1.9
BC078059_1(BC078059|pid:none) Xenopus laevis MKI67 FHA domain-in... 35 1.9
CP000096_86(CP000096|pid:none) Pelodictyon luteolum DSM 273, com... 35 1.9
AP008209_482(AP008209|pid:none) Oryza sativa (japonica cultivar-... 35 1.9
CR940347_345(CR940347|pid:none) Theileria annulata strain Ankara... 35 1.9
(Q7SYS2) RecName: Full=MKI67 FHA domain-interacting nucleolar ph... 35 1.9
AK220979_1(AK220979|pid:none) Arabidopsis thaliana mRNA for euka... 35 1.9
U71299_1(U71299|pid:none) Ambystoma mexicanum RNA-binding protei... 35 1.9
AY815954_1(AY815954|pid:none) Schistosoma japonicum SJCHGC01035 ... 35 1.9
AE014298_202(AE014298|pid:none) Drosophila melanogaster chromoso... 35 1.9
AM502227_8(AM502227|pid:none) Leishmania infantum chromosome 9. 35 1.9
EF147516_1(EF147516|pid:none) Populus trichocarpa clone WS0123_B... 35 1.9
AK065337_1(AK065337|pid:none) Oryza sativa Japonica Group cDNA c... 35 1.9
(B4PP90) RecName: Full=Eukaryotic translation initiation factor ... 35 1.9
AF291712_1(AF291712|pid:none) Arabidopsis thaliana initiation fa... 35 1.9
BC097597_1(BC097597|pid:none) Xenopus laevis MKI67 FHA domain-in... 35 1.9
AM270139_30(AM270139|pid:none) Aspergillus niger contig An07c022... 35 1.9
AY738479_1(AY738479|pid:none) Gemmata sp. Wa1-1 unknown gene. 35 1.9
BX649404_1(BX649404|pid:none) Zebrafish DNA sequence from clone ... 35 1.9
AF389431_1(AF389431|pid:none) Solanum tuberosum single-stranded ... 35 1.9
AE014298_203(AE014298|pid:none) Drosophila melanogaster chromoso... 35 1.9
AK316731_1(AK316731|pid:none) Arabidopsis thaliana AT3G15010 mRN... 35 1.9
U58976_1(U58976|pid:none) Drosophila melanogaster ovarian RNA-bi... 35 2.5
U73846_1(U73846|pid:none) Drosophila melanogaster testis-specifi... 35 2.5
AE017126_13(AE017126|pid:none) Prochlorococcus marinus subsp. ma... 35 2.5
AF190656_1(AF190656|pid:none) Nicotiana tabacum clone 1 poly(A)-... 35 2.5
(Q9ZR39) RecName: Full=Splicing factor U2af large subunit A; Alt... 35 2.5
AF190655_1(AF190655|pid:none) Nicotiana tabacum poly(A)-binding ... 35 2.5
AC148756_6(AC148756|pid:none) Medicago truncatula clone mth2-22d... 35 2.5
AE014298_1040(AE014298|pid:none) Drosophila melanogaster chromos... 35 2.5
AK291320_1(AK291320|pid:none) Homo sapiens cDNA FLJ76297 complet... 35 2.5
BT077985_1(BT077985|pid:none) Lepeophtheirus salmonis clone lsal... 35 2.5
AK067210_1(AK067210|pid:none) Oryza sativa Japonica Group cDNA c... 35 2.5
AE016817_241(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 35 2.5
AM469805_2(AM469805|pid:none) Vitis vinifera contig VV78X114964.... 35 2.5
BT003583_1(BT003583|pid:none) Drosophila melanogaster LD15933 fu... 35 2.5
EF517793_4(EF517793|pid:none) Petunia integrifolia subsp. inflat... 35 2.5
BT063427_1(BT063427|pid:none) Zea mays full-length cDNA clone ZM... 35 2.5
AE014298_1044(AE014298|pid:none) Drosophila melanogaster chromos... 35 2.5
(Q60990) RecName: Full=RNA-binding motif protein, Y chromosome, ... 35 2.5
AE014298_1049(AE014298|pid:none) Drosophila melanogaster chromos... 35 2.5
AY891947_1(AY891947|pid:none) Synthetic construct Homo sapiens c... 35 2.5
BC122593_1(BC122593|pid:none) Bos taurus RNA binding motif prote... 35 2.5
AJ441311_1(AJ441311|pid:none) Rumex obtusifolius mRNA for putati... 35 2.5
CR382131_105(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 35 2.5
AM270126_21(AM270126|pid:none) Aspergillus niger contig An07c008... 35 2.5
AC005310_7(AC005310|pid:none) Arabidopsis thaliana chromosome 2 ... 35 2.5
B39725(B39725) sex-lethal sex determination protein MS11 - fruit... 35 2.5
(Q9ZR40) RecName: Full=Splicing factor U2af large subunit B; Alt... 35 2.5
AF025689_1(AF025689|pid:none) Musca domestica clone MdSxlc1 Sex-... 35 2.5
AE014298_1041(AE014298|pid:none) Drosophila melanogaster chromos... 35 2.5
(Q28CY2) RecName: Full=Eukaryotic translation initiation factor ... 35 2.5
AP007151_225(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 35 2.5
EU730899_5(EU730899|pid:none) Brachypodium distachyon clone BAC ... 35 2.5
AC006577_16(AC006577|pid:none) Sequence of BAC F15I1 from Arabid... 35 2.5
(Q3ZC12) RecName: Full=Eukaryotic translation initiation factor ... 35 2.5
EF083285_1(EF083285|pid:none) Picea sitchensis clone WS0282_I21 ... 35 2.5
EF517794_10(EF517794|pid:none) Solanum bulbocastanum BAC 27I18, ... 35 2.5
CP001037_5335(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 35 2.5
AB030233_1(AB030233|pid:none) Ciona intestinalis mRNA for CiMsi,... 35 2.5
AY538250_1(AY538250|pid:none) Bradysia coprophila sex-lethal (Sx... 35 2.5
(Q24668) RecName: Full=Protein sex-lethal; 35 2.5
EU543263_1(EU543263|pid:none) Solanum melongena U2 snRNP auxilia... 35 2.5
(Q6BI95) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 35 2.5
(Q5KBW2) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 35 2.5
AF273333_11(AF273333|pid:none) Lycopersicon esculentum clone BAC... 35 2.5
BT052605_1(BT052605|pid:none) Medicago truncatula clone MTYFD_FE... 35 2.5
AB170437_1(AB170437|pid:none) Macaca fascicularis brain cDNA clo... 35 2.5
(Q9Z1D1) RecName: Full=Eukaryotic translation initiation factor ... 35 2.5
U70733_1(U70733|pid:none) Mus musculus translation initiation fa... 35 2.5
CU633895_170(CU633895|pid:none) Podospora anserina genomic DNA c... 35 2.5
CU928171_601(CU928171|pid:none) Kluyveromyces thermotolerans str... 35 2.5
(Q6DJI8) RecName: Full=Eukaryotic translation initiation factor ... 35 2.5
(Q6GL69) RecName: Full=MKI67 FHA domain-interacting nucleolar ph... 35 2.5
CR457257_1(CR457257|pid:none) Homo sapiens full open reading fra... 34 3.3
AY072407_1(AY072407|pid:none) Arabidopsis thaliana eukaryotic tr... 34 3.3
CP000838_96(CP000838|pid:none) Acaryochloris marina MBIC11017 pl... 34 3.3
BC066454_1(BC066454|pid:none) Danio rerio heterogeneous nuclear ... 34 3.3
(Q2QZL4) RecName: Full=Splicing factor U2af large subunit B; Alt... 34 3.3
AE014134_2269(AE014134|pid:none) Drosophila melanogaster chromos... 34 3.3
FJ861207_1(FJ861207|pid:none) Octopus bimaculoides Elav mRNA, pa... 34 3.3
T09704(T09704) probable arginine/serine-rich splicing factor - a... 34 3.3
AP008217_1468(AP008217|pid:none) Oryza sativa (japonica cultivar... 34 3.3
(Q2R0Q1) RecName: Full=Splicing factor U2af large subunit A; Alt... 34 3.3
BT039583_1(BT039583|pid:none) Zea mays full-length cDNA clone ZM... 34 3.3
AM910994_313(AM910994|pid:none) Plasmodium knowlesi strain H chr... 34 3.3
BT052594_1(BT052594|pid:none) Medicago truncatula clone MTYFD_FE... 34 3.3
BC044487_1(BC044487|pid:none) Danio rerio RNA binding motif prot... 34 3.3
BT035405_1(BT035405|pid:none) Zea mays full-length cDNA clone ZM... 34 3.3
BT065814_1(BT065814|pid:none) Zea mays full-length cDNA clone ZM... 34 3.3
BC045264_1(BC045264|pid:none) Xenopus laevis splicing factor 3b,... 34 3.3
AP008213_1538(AP008213|pid:none) Oryza sativa (japonica cultivar... 34 3.3
AJ302060_1(AJ302060|pid:none) Oryza sativa mRNA for glycine rich... 34 3.3
BC091794_1(BC091794|pid:none) Danio rerio RNA binding motif prot... 34 3.3
AC136449_14(AC136449|pid:none) Medicago truncatula clone mth2-11... 34 3.3
AM471698_6(AM471698|pid:none) Vitis vinifera contig VV78X231541.... 34 3.3
EZ000279_1(EZ000279|pid:none) TSA: Amblyomma americanum Contig10... 34 3.3
>AJ720206_1(AJ720206|pid:none) Gallus gallus mRNA for hypothetical
protein, clone 12j16.
Length = 502
Score = 56.2 bits (134), Expect = 8e-07
Identities = 25/60 (41%), Positives = 40/60 (66%)
Frame = +3
Query: 3 LFSRYPGMEYCDLKKDKNTGKSKGFAYVNYSSPQAALLAKNDLNGIKYPTSHTLKVVFAE 182
LF PG+EYCD+++D +T + G+A + YS+ +A+ AK L+G +YP + L V+F E
Sbjct: 287 LFDLVPGLEYCDVQRDPHT--NNGYAVIQYSTAASAIYAKYKLHGFEYPPGNRLTVIFLE 344
Score = 41.2 bits (95), Expect = 0.027
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +3
Query: 6 FSRYPGMEYCDLKKDKNTGKSKGFAYVNYSSPQAALLAKNDLNGIKYPTSHTLKVVFAEP 185
F Y +EYC + K+K TG+SKG YV Y P A A + + + + + AEP
Sbjct: 167 FKMYGDIEYCSIIKNKTTGESKGLGYVMYLKPSQAARAIEECD-------RSYRAILAEP 219
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 796,733,737
Number of extensions: 12252632
Number of successful extensions: 22527
Number of sequences better than 10.0: 774
Number of HSP's gapped: 22518
Number of HSP's successfully gapped: 822
Length of query: 221
Length of database: 1,040,966,779
Length adjustment: 124
Effective length of query: 97
Effective length of database: 643,635,439
Effective search space: 62432637583
Effective search space used: 62432637583
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
1 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |